Rorug07G0277700

ABC transporter C family member

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Forward (+)
26568752 .. 26573132
4381 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0277700.1

Sequence Viewer

Length: 969 bp
ATGGACAGAGTTGGTGAAGGCAGTAGTCAGCTTCCATGTGAATTTATTCTGGAGAATCCTCATATGGTCAATTGCTATTATATATCTTCCTGGACGAATTTTGACGGCCTTACAAAGGGAGAGCTGGAACTGCATTTACATGATATGCAAATCGAGCTCCAGAATCTGGCATGGGATAGGAAAGAGCTTGAGGAACATCTACAAAAAGCAATTAAAGAACAAAAAATGATGGAGCTGATATTAGGAGAGCTTGAAGAAGAACATGACAAGGTCATTGCCAAAATTGAAGTGCTAGTGGGCGAGTTACAGGATCTGAAAACTGAAAATCTTCGACTGAAAGAAGTTCAAGGAAAGAGCTATTGGAACTTTAAAGGCCGAGATGAAACAAGTGATGTCCATAATACAGCAATCGCTGACTATGGCATTCCCTACGGGATCCCATCATGGAAATCCAGTTATGATGGAAGTGGTATTGTCCTCCAGGACCTTCTAATGCGCAAAGATGCGTGGGGAGAAGAAAGTAAACCTAAAACCGAGTTGCAGATCTTAAGAAATGATTCAAAGTACGTTGGGCCTGTTCATCCTATTATGCCTGAAACCAACACCAGAATTGTAGATATGGGTGAAGTTTTTAACCAACGAAGGGTTATTGCAATGAAACAGAGTCTGTTTAGTGCAGTTTTATCGCTTTTGGTTGGAGTGATTATCTGGCAAGCTGAAGACCCTTGCATGCCCCTTGTCGTGGCTCTCTTCACTGTAGTTGGCATGTCATTAAAGAGTGTTGTCGAGTTTTTCTCAACCATAAAGAACAGACCTGCTTCGGATGCTGTTGCTCTCTTAAGCTTCAACTGGTTCATACTTGGCACACTTACCTACCCAACACTGCCGAGGGTTGCCCATATGGTGGCACCAGTGGCATCAAATCTTGTGGACCGGGCATTAAGCTGGCTTGGTTTCTCTTTTTCCTAG

Protein Analysis

322

Amino Acids

36.52

Weight (kDa)

5.13

Isoelectric Point (pI)

34.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000242)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g06580 FvH4_7g13910 FvH4_7g13921 FvH4_7g13931 FvH4_7g13940 FvH4_7g13941 FvH4_7g13950 FvH4_7g13963 FvH4_7g13964 FvH4_7g13965 FvH4_7g19470
malus_domestica MD01G1055500.v1.1 MD01G1055800.v1.1 MD01G1055900.v1.1 MD01G1056000.v1.1 MD01G1056100.v1.1 MD07G1111100.v1.1 MD07G1139700.v1.1 MD07G1139800.v1.1
prunus_persica Prupe.2G165600_v2.0.a1 Prupe.2G165700_v2.0.a1 Prupe.2G165800_v2.0.a1 Prupe.2G165900_v2.0.a1 Prupe.2G166000_v2.0.a1 Prupe.2G166700_v2.0.a1 Prupe.2G166800_v2.0.a1
pyrus_communis pycom01g08120 pycom07g09590 pycom07g13780
rosa_chinensis RchiOBHm_Chr1g0333851 RchiOBHm_Chr1g0333861 RchiOBHm_Chr1g0334061 RchiOBHm_Chr1g0335111 RchiOBHm_Chr1g0335191 RchiOBHm_Chr1g0340801 RchiOBHm_Chr1g0348301 RchiOBHm_Chr1g0353601 RchiOBHm_Chr1g0354571 RchiOBHm_Chr1g0354621 RchiOBHm_Chr7g0221941 RchiOBHm_Chr7g0232861 RchiOBHm_Chr7g0232891 RchiOBHm_Chr7g0232951 RchiOBHm_Chr7g0232981 RchiOBHm_Chr7g0233011
rosa_laevigata RLG00000001309 RLG00000001311 RLG00000001312 RLG00000028195 RLG00000028197 RLG00000028198 RLG00000028207 RLG00000028217 RLG00000028219 RLG00000028668 RLG00000029045 RLG00000029479 RLG00000029482
rosa_multiflora Rmu_co7977860.1_g000001 Rmu_co8392301.1_g000001 Rmu_co8424661.1_g000001 Rmu_sc0000026.1_g000015 Rmu_sc0000942.1_g000020 Rmu_sc0001211.1_g000118 Rmu_sc0002200.1_g000057 Rmu_sc0002722.1_g000008 Rmu_sc0002737.1_g000002 Rmu_sc0003690.1_g000020 Rmu_sc0003690.1_g000021 Rmu_sc0005065.1_g000045 Rmu_sc0005947.1_g000037 Rmu_sc0006632.1_g000003 Rmu_sc0006746.1_g000008 Rmu_sc0006746.1_g000018 Rmu_sc0009527.1_g000002 Rmu_sc0011926.1_g000002 Rmu_sc0015525.1_g000007 Rmu_sc0020815.1_g000003 Rmu_sc0022127.1_g000001 Rmu_sc0026161.1_g000001 Rmu_sc0029005.1_g000001 Rmu_ssc0000018.1_g000018 Rmu_ssc0000018.1_g000022
rosa_roxburghii Rroxscaffold_3G00227810 Rroxscaffold_3G00227830 Rroxscaffold_3G00227840 Rroxscaffold_4G00300900 Rroxscaffold_4G00300910 Rroxscaffold_4G00300920 Rroxscaffold_4G00300990 Rroxscaffold_4G00307030 Rroxscaffold_4G00316180
rosa_rugosa Rorug01G0112300 Rorug01G0112700 Rorug01G0120900 Rorug01G0161200.1 Rorug01G0236500 Rorug01G0243300 Rorug01G0243400 Rorug05G0135300 Rorug07G0276400 Rorug07G0276400 Rorug07G0276500 Rorug07G0276600 Rorug07G0277700
rosa_samantha Rh1AG134800 Rh1AG136600 Rh1AG142000 Rh1AG176400 Rh1AG211400 Rh1AG248900 Rh1AG254300 Rh1AG254600 Rh1DG141700 Rh1DG146700 Rh1DG147000 Rh1DG176000 Rh1DG207500 Rh1DG245700 Rh1DG251600 Rh1DG252200 Rh1DG253000 Rh1DG253200 Rh7CG450500 Rh7CG450900 Rh7CG452200 Rh7DG421100 Rh7DG421200
rosa_wichuraiana Rw0G004720 Rw0G013980 Rw1G011770 Rw1G022200 Rw1G022240 Rw1G022250 Rw1G022270 Rw7G035640 Rw7G035650 Rw7G035680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 497
Acc36I ACCTGC 1 cut(s) 823
AccB1I GGYRCC 1 cut(s) 907
AccB7I CCANNNNNTGG 2 cut(s) 166, 904
AclWI GGATC 3 cut(s) 318, 430, 443
AcsI RAATTY 2 cut(s) 41, 97
AcuI CTGAAG 1 cut(s) 738
AfaI GTAC 1 cut(s) 566
AfiI CCNNNNNNNGG 5 cut(s) 115, 166, 643, 742, 904
AflII CTTAAG 2 cut(s) 547, 838
AgsI TTSAA 5 cut(s) 254, 287, 347, 561, 847
AjnI CCWGG 2 cut(s) 89, 480
AjuI GAANNNNNNNTTGG 2 cut(s) 343, 375
Alw21I GWGCWC 1 cut(s) 159
AlwI GGATC 3 cut(s) 318, 430, 443
AlwNI CAGNNNCTG 3 cut(s) 166, 313, 667
AoxI GGCC 3 cut(s) 106, 373, 572
ApoI RAATTY 2 cut(s) 41, 97
Asp700I GAANNNNTTC 3 cut(s) 45, 327, 556
AspLEI GCGC 1 cut(s) 498
AspS9I GGNCC 3 cut(s) 484, 572, 931
AsuC2I CCSGG 1 cut(s) 935
AsuHPI GGTGA 2 cut(s) 26, 635
AvaII GGWCC 2 cut(s) 484, 931
BamHI GGATCC 1 cut(s) 435
BanI GGYRCC 1 cut(s) 907
BanII GRGCYC 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 726
Bbv12I GWGCWC 1 cut(s) 159
BccI CCATC 3 cut(s) 223, 448, 455
BceAI ACGGC 1 cut(s) 121
BcgI CGANNNNNNTGC 2 cut(s) 666, 700
BciT130I CCWGG 2 cut(s) 91, 482
BcnI CCSGG 1 cut(s) 935
BfaI CTAG 2 cut(s) 293, 967
BfmI CTRYAG 1 cut(s) 756
BfrI CTTAAG 2 cut(s) 547, 838
BfuAI ACCTGC 1 cut(s) 823
BglII AGATCT 1 cut(s) 543
Bme1390I CCNGG 3 cut(s) 91, 482, 935
Bme18I GGWCC 2 cut(s) 484, 931
BmgT120I GGNCC 3 cut(s) 484, 572, 931
BmiI GGNNCC 2 cut(s) 437, 909
BmrFI CCNGG 3 cut(s) 91, 482, 935
BmsI GCATC 3 cut(s) 493, 814, 926
BpiI GAAGAC 1 cut(s) 726
BplI GAGNNNNNCTC 2 cut(s) 779, 811
BpmI CTGGAG 3 cut(s) 71, 143, 464
BpuEI CTTGAG 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 935
BsaJI CCNNGG 1 cut(s) 887
Bsc4I CCNNNNNNNGG 5 cut(s) 115, 166, 643, 742, 904
Bse1I ACTGG 3 cut(s) 453, 854, 911
Bse3DI GCAATG 2 cut(s) 273, 660
BseBI CCWGG 2 cut(s) 91, 482
BseDI CCNNGG 1 cut(s) 887
BseGI GGATG 2 cut(s) 580, 829
BseLI CCNNNNNNNGG 5 cut(s) 115, 166, 643, 742, 904
BseMI GCAATG 2 cut(s) 273, 660
BseNI ACTGG 3 cut(s) 453, 854, 911
BsgI GTGCAG 1 cut(s) 696
BshFI GGCC 3 cut(s) 108, 375, 574
BshNI GGYRCC 1 cut(s) 907
BsiHKAI GWGCWC 1 cut(s) 159
BsiSI CCGG 1 cut(s) 934
BslI CCNNNNNNNGG 5 cut(s) 115, 166, 643, 742, 904
BsmI GAATGC 1 cut(s) 423
BsnI GGCC 3 cut(s) 108, 375, 574
Bsp1286I GDGCHC 1 cut(s) 159
Bsp143I GATC 3 cut(s) 310, 435, 543
BspANI GGCC 3 cut(s) 108, 375, 574
BspLI GGNNCC 2 cut(s) 437, 909
BspMI ACCTGC 1 cut(s) 823
BspPI GGATC 3 cut(s) 318, 430, 443
BspT107I GGYRCC 1 cut(s) 907
BspTI CTTAAG 2 cut(s) 547, 838
BsrDI GCAATG 2 cut(s) 273, 660
BsrI ACTGG 3 cut(s) 453, 854, 911
BssECI CCNNGG 1 cut(s) 887
BssMI GATC 3 cut(s) 310, 435, 543
Bst2UI CCWGG 2 cut(s) 91, 482
Bst4CI ACNGT 1 cut(s) 757
Bst6I CTCTTC 1 cut(s) 755
BstAFI CTTAAG 2 cut(s) 547, 838
BstC8I GCNNGC 3 cut(s) 714, 731, 947
BstENI CCTNNNNNAGG 1 cut(s) 113
BstF5I GGATG 2 cut(s) 580, 829
BstHHI GCGC 1 cut(s) 498
BstKTI GATC 3 cut(s) 313, 438, 546
BstMBI GATC 3 cut(s) 310, 435, 543
BstMWI GCNNNNNNNGC 4 cut(s) 130, 154, 824, 914
BstNI CCWGG 2 cut(s) 91, 482
BstNSI RCATGY 2 cut(s) 733, 769
BstSCI CCNGG 3 cut(s) 89, 480, 933
BstSFI CTRYAG 1 cut(s) 756
BstV2I GAAGAC 1 cut(s) 726
BstX2I RGATCY 3 cut(s) 310, 435, 543
BstYI RGATCY 3 cut(s) 310, 435, 543
BsuRI GGCC 3 cut(s) 108, 375, 574
BtsCI GGATG 2 cut(s) 580, 829
BtsI GCAGTG 1 cut(s) 881
BtsIMutI CAGTG 3 cut(s) 753, 881, 918
BveI ACCTGC 1 cut(s) 823
Cac8I GCNNGC 3 cut(s) 714, 731, 947
CaiI CAGNNNCTG 3 cut(s) 166, 313, 667
CfoI GCGC 1 cut(s) 498
Cfr13I GGNCC 3 cut(s) 484, 572, 931
Csp6I GTAC 1 cut(s) 565
CspCI CAANNNNNGTGG 2 cut(s) 909, 944
CviAII CATG 7 cut(s) 36, 140, 171, 263, 444, 730, 766
CviQI GTAC 1 cut(s) 565
DpnI GATC 3 cut(s) 312, 437, 545
DpnII GATC 3 cut(s) 310, 435, 543
DraI TTTAAA 1 cut(s) 370
Eam1104I CTCTTC 1 cut(s) 755
EarI CTCTTC 1 cut(s) 755
Ecl136II GAGCTC 1 cut(s) 157
Eco24I GRGCYC 1 cut(s) 159
Eco47I GGWCC 2 cut(s) 484, 931
Eco53kI GAGCTC 1 cut(s) 157
Eco57I CTGAAG 1 cut(s) 738
EcoICRI GAGCTC 1 cut(s) 157
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoO109I RGGNCCY 1 cut(s) 484
EcoRII CCWGG 2 cut(s) 89, 480
EcoT38I GRGCYC 1 cut(s) 159
FaeI CATG 7 cut(s) 39, 143, 174, 266, 447, 733, 769
FatI CATG 7 cut(s) 35, 139, 170, 262, 443, 729, 765
FauNDI CATATG 2 cut(s) 63, 900
FokI GGATG 2 cut(s) 567, 836
FriOI GRGCYC 1 cut(s) 159
FspBI CTAG 2 cut(s) 293, 967
FspI TGCGCA 1 cut(s) 497
GlaI GCGC 1 cut(s) 497
GsuI CTGGAG 3 cut(s) 71, 143, 464
HaeIII GGCC 3 cut(s) 108, 375, 574
HapII CCGG 1 cut(s) 934
HhaI GCGC 1 cut(s) 498
Hin1II CATG 7 cut(s) 39, 143, 174, 266, 447, 733, 769
Hin6I GCGC 1 cut(s) 496
HinP1I GCGC 1 cut(s) 496
HindIII AAGCTT 1 cut(s) 841
HinfI GANTC 4 cut(s) 55, 163, 557, 664
HpaII CCGG 1 cut(s) 934
HphI GGTGA 2 cut(s) 26, 635
Hpy166II GTNNAC 2 cut(s) 524, 931
Hpy188I TCNGA 2 cut(s) 315, 823
Hpy188III TCNNGA 2 cut(s) 50, 160
Hpy8I GTNNAC 2 cut(s) 524, 931
HpyAV CCTTC 3 cut(s) 11, 497, 636
HpyCH4III ACNGT 1 cut(s) 757
HpyCH4IV ACGT 1 cut(s) 567
HpyCH4V TGCA 6 cut(s) 133, 148, 541, 653, 677, 729
HpyF10VI GCNNNNNNNGC 4 cut(s) 130, 154, 824, 914
HpySE526I ACGT 1 cut(s) 567
Hsp92II CATG 7 cut(s) 39, 143, 174, 266, 447, 733, 769
HspAI GCGC 1 cut(s) 496
Kzo9I GATC 3 cut(s) 310, 435, 543
LmnI GCTCC 2 cut(s) 162, 232
LweI GCATC 3 cut(s) 493, 814, 926
MaeI CTAG 2 cut(s) 293, 967
MaeII ACGT 1 cut(s) 567
MaeIII GTNAC 1 cut(s) 303
MalI GATC 3 cut(s) 312, 437, 545
MboI GATC 3 cut(s) 310, 435, 543
MboII GAAGA 7 cut(s) 78, 266, 269, 320, 527, 731, 742
MfeI CAATTG 1 cut(s) 70
MflI RGATCY 3 cut(s) 310, 435, 543
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 6 cut(s) 41, 70, 97, 210, 282, 609
MlyI GAGTC 1 cut(s) 673
MmeI TCCRAC 1 cut(s) 676
MnlI CCTC 4 cut(s) 69, 184, 488, 882
MroXI GAANNNNTTC 3 cut(s) 45, 327, 556
MseI TTAA 7 cut(s) 213, 369, 548, 633, 773, 839, 941
MslI CAYNNNNRTG 1 cut(s) 138
MspCI CTTAAG 2 cut(s) 547, 838
MspI CCGG 1 cut(s) 934
MspR9I CCNGG 3 cut(s) 91, 482, 935
MunI CAATTG 1 cut(s) 70
Mva1269I GAATGC 1 cut(s) 423
MvaI CCWGG 2 cut(s) 91, 482
MwoI GCNNNNNNNGC 4 cut(s) 130, 154, 824, 914
NciI CCSGG 1 cut(s) 935
NdeI CATATG 2 cut(s) 63, 900
NdeII GATC 3 cut(s) 310, 435, 543
NlaIII CATG 7 cut(s) 39, 143, 174, 266, 447, 733, 769
NlaIV GGNNCC 2 cut(s) 437, 909
NmeAIII GCCGAG 2 cut(s) 401, 912
NsbI TGCGCA 1 cut(s) 497
NspI RCATGY 2 cut(s) 733, 769
PaeI GCATGC 1 cut(s) 733
PctI GAATGC 1 cut(s) 423
PdmI GAANNNNTTC 3 cut(s) 45, 327, 556
PfeI GAWTC 3 cut(s) 55, 163, 557
PflFI GACNNNGTC 1 cut(s) 269
PflMI CCANNNNNTGG 2 cut(s) 166, 904
PfoI TCCNGGA 2 cut(s) 89, 480
PleI GAGTC 1 cut(s) 672
PpsI GAGTC 1 cut(s) 672
PpuMI RGGWCCY 1 cut(s) 484
Psp124BI GAGCTC 1 cut(s) 159
Psp5II RGGWCCY 1 cut(s) 484
Psp6I CCWGG 2 cut(s) 89, 480
PspGI CCWGG 2 cut(s) 89, 480
PspN4I GGNNCC 2 cut(s) 437, 909
PspPI GGNCC 3 cut(s) 484, 572, 931
PspPPI RGGWCCY 1 cut(s) 484
PsrI GAACNNNNNNTAC 2 cut(s) 120, 152
PstNI CAGNNNCTG 3 cut(s) 166, 313, 667
PsuI RGATCY 3 cut(s) 310, 435, 543
PsyI GACNNNGTC 1 cut(s) 269
RsaI GTAC 1 cut(s) 566
RsaNI GTAC 1 cut(s) 565
RseI CAYNNNNRTG 1 cut(s) 138
SacI GAGCTC 1 cut(s) 159
SaqAI TTAA 7 cut(s) 213, 369, 548, 633, 773, 839, 941
Sau3AI GATC 3 cut(s) 310, 435, 543
Sau96I GGNCC 3 cut(s) 484, 572, 931
SchI GAGTC 1 cut(s) 673
ScrFI CCNGG 3 cut(s) 91, 482, 935
SduI GDGCHC 1 cut(s) 159
SfaNI GCATC 3 cut(s) 493, 814, 926
SfcI CTRYAG 1 cut(s) 756
SinI GGWCC 2 cut(s) 484, 931
SmiMI CAYNNNNRTG 1 cut(s) 138
SmlI CTYRAG 3 cut(s) 188, 547, 838
SmoI CTYRAG 3 cut(s) 188, 547, 838
SphI GCATGC 1 cut(s) 733
Sse9I AATT 6 cut(s) 41, 70, 97, 210, 282, 609
SspMI CTAG 2 cut(s) 293, 967
SstI GAGCTC 1 cut(s) 159
StyD4I CCNGG 3 cut(s) 89, 480, 933
TaaI ACNGT 1 cut(s) 757
TaiI ACGT 1 cut(s) 570
TaqI TCGA 3 cut(s) 153, 331, 786
TasI AATT 6 cut(s) 41, 70, 97, 210, 282, 609
TfiI GAWTC 3 cut(s) 55, 163, 557
Tru1I TTAA 7 cut(s) 213, 369, 548, 633, 773, 839, 941
Tru9I TTAA 7 cut(s) 213, 369, 548, 633, 773, 839, 941
TscAI CASTG 3 cut(s) 760, 888, 918
TspDTI ATGAA 4 cut(s) 396, 569, 671, 844
TspRI CASTG 3 cut(s) 760, 888, 918
Tth111I GACNNNGTC 1 cut(s) 269
Van91I CCANNNNNTGG 2 cut(s) 166, 904
Vha464I CTTAAG 2 cut(s) 547, 838
VpaK11BI GGWCC 2 cut(s) 484, 931
XagI CCTNNNNNAGG 1 cut(s) 113
XapI RAATTY 2 cut(s) 41, 97
XceI RCATGY 2 cut(s) 733, 769
XmnI GAANNNNTTC 3 cut(s) 45, 327, 556
XspI CTAG 2 cut(s) 293, 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.