Ripening-related protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 567 |
| AciI | CCGC | 2 cut(s) | 729, 833 |
| AclWI | GGATC | 4 cut(s) | 117, 130, 269, 497 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 258, 386, 604 |
| AgsI | TTSAA | 1 cut(s) | 810 |
| AjnI | CCWGG | 1 cut(s) | 85 |
| AluBI | AGCT | 4 cut(s) | 140, 172, 232, 749 |
| AluI | AGCT | 4 cut(s) | 140, 172, 232, 749 |
| Alw26I | GTCTC | 3 cut(s) | 143, 242, 281 |
| AlwI | GGATC | 4 cut(s) | 117, 130, 269, 497 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 749 |
| AoxI | GGCC | 3 cut(s) | 82, 316, 669 |
| AspS9I | GGNCC | 3 cut(s) | 83, 316, 452 |
| AsuHPI | GGTGA | 2 cut(s) | 619, 677 |
| AvaII | GGWCC | 1 cut(s) | 452 |
| BaeGI | GKGCMC | 1 cut(s) | 221 |
| BamHI | GGATCC | 1 cut(s) | 122 |
| BanII | GRGCYC | 1 cut(s) | 856 |
| BbsI | GAAGAC | 1 cut(s) | 466 |
| BccI | CCATC | 5 cut(s) | 266, 307, 443, 488, 554 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 673, 707 |
| BciT130I | CCWGG | 1 cut(s) | 87 |
| BclI | TGATCA | 1 cut(s) | 520 |
| BcoDI | GTCTC | 3 cut(s) | 143, 242, 281 |
| BfaI | CTAG | 3 cut(s) | 363, 470, 937 |
| BfmI | CTRYAG | 4 cut(s) | 72, 696, 741, 921 |
| BglII | AGATCT | 2 cut(s) | 359, 365 |
| Bme1390I | CCNGG | 1 cut(s) | 87 |
| Bme18I | GGWCC | 1 cut(s) | 452 |
| BmgT120I | GGNCC | 3 cut(s) | 83, 316, 452 |
| BmiI | GGNNCC | 2 cut(s) | 124, 317 |
| BmrFI | CCNGG | 1 cut(s) | 87 |
| BmrI | ACTGGG | 1 cut(s) | 905 |
| BmsI | GCATC | 3 cut(s) | 194, 285, 776 |
| BmuI | ACTGGG | 1 cut(s) | 905 |
| BpiI | GAAGAC | 1 cut(s) | 466 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 81, 113, 376, 408 |
| BpmI | CTGGAG | 2 cut(s) | 65, 108 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BsaBI | GATNNNNATC | 1 cut(s) | 364 |
| BsaI | GGTCTC | 3 cut(s) | 143, 242, 281 |
| BsaJI | CCNNGG | 3 cut(s) | 85, 160, 636 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 258, 386, 604 |
| Bse118I | RCCGGY | 1 cut(s) | 671 |
| Bse1I | ACTGG | 4 cut(s) | 506, 582, 616, 911 |
| Bse3DI | GCAATG | 1 cut(s) | 99 |
| Bse8I | GATNNNNATC | 1 cut(s) | 364 |
| BseBI | CCWGG | 1 cut(s) | 87 |
| BseDI | CCNNGG | 3 cut(s) | 85, 160, 636 |
| BseGI | GGATG | 2 cut(s) | 274, 565 |
| BseJI | GATNNNNATC | 1 cut(s) | 364 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 258, 386, 604 |
| BseMI | GCAATG | 1 cut(s) | 99 |
| BseMII | CTCAG | 1 cut(s) | 182 |
| BseNI | ACTGG | 4 cut(s) | 506, 582, 616, 911 |
| BseRI | GAGGAG | 2 cut(s) | 62, 519 |
| BseSI | GKGCMC | 1 cut(s) | 221 |
| BshFI | GGCC | 3 cut(s) | 84, 318, 671 |
| BsiSI | CCGG | 1 cut(s) | 672 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 258, 386, 604 |
| BsmAI | GTCTC | 3 cut(s) | 143, 242, 281 |
| BsmI | GAATGC | 1 cut(s) | 67 |
| BsnI | GGCC | 3 cut(s) | 84, 318, 671 |
| Bso31I | GGTCTC | 3 cut(s) | 143, 242, 281 |
| Bsp1286I | GDGCHC | 2 cut(s) | 221, 856 |
| Bsp143I | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| Bsp19I | CCATGG | 1 cut(s) | 160 |
| BspACI | CCGC | 2 cut(s) | 729, 833 |
| BspANI | GGCC | 3 cut(s) | 84, 318, 671 |
| BspCNI | CTCAG | 1 cut(s) | 181 |
| BspHI | TCATGA | 1 cut(s) | 192 |
| BspLI | GGNNCC | 2 cut(s) | 124, 317 |
| BspMAI | CTGCAG | 3 cut(s) | 76, 700, 745 |
| BspPI | GGATC | 4 cut(s) | 117, 130, 269, 497 |
| BspTNI | GGTCTC | 3 cut(s) | 143, 242, 281 |
| BsrDI | GCAATG | 1 cut(s) | 99 |
| BsrFI | RCCGGY | 1 cut(s) | 671 |
| BsrI | ACTGG | 4 cut(s) | 506, 582, 616, 911 |
| BssAI | RCCGGY | 1 cut(s) | 671 |
| BssECI | CCNNGG | 3 cut(s) | 85, 160, 636 |
| BssMI | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| BssT1I | CCWWGG | 2 cut(s) | 160, 636 |
| Bst2UI | CCWGG | 1 cut(s) | 87 |
| Bst4CI | ACNGT | 2 cut(s) | 15, 867 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 71, 704, 707, 737, 797 |
| BstDEI | CTNAG | 2 cut(s) | 168, 233 |
| BstDSI | CCRYGG | 1 cut(s) | 160 |
| BstEII | GGTNACC | 1 cut(s) | 577 |
| BstF5I | GGATG | 2 cut(s) | 274, 565 |
| BstKTI | GATC | 6 cut(s) | 125, 264, 362, 368, 505, 523 |
| BstMAI | GTCTC | 3 cut(s) | 143, 242, 281 |
| BstMBI | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| BstNI | CCWGG | 1 cut(s) | 87 |
| BstPI | GGTNACC | 1 cut(s) | 577 |
| BstSCI | CCNGG | 1 cut(s) | 85 |
| BstSFI | CTRYAG | 4 cut(s) | 72, 696, 741, 921 |
| BstSLI | GKGCMC | 1 cut(s) | 221 |
| BstV2I | GAAGAC | 1 cut(s) | 466 |
| BstX2I | RGATCY | 4 cut(s) | 122, 261, 359, 365 |
| BstYI | RGATCY | 4 cut(s) | 122, 261, 359, 365 |
| BsuRI | GGCC | 3 cut(s) | 84, 318, 671 |
| BtgI | CCRYGG | 1 cut(s) | 160 |
| BtgZI | GCGATG | 1 cut(s) | 466 |
| BtsCI | GGATG | 2 cut(s) | 274, 565 |
| BtsI | GCAGTG | 2 cut(s) | 81, 630 |
| BtsIMutI | CAGTG | 3 cut(s) | 81, 630, 863 |
| CaiI | CAGNNNCTG | 1 cut(s) | 749 |
| CciI | TCATGA | 1 cut(s) | 192 |
| Cfr10I | RCCGGY | 1 cut(s) | 671 |
| Cfr13I | GGNCC | 3 cut(s) | 83, 316, 452 |
| CviAII | CATG | 7 cut(s) | 66, 101, 161, 193, 494, 524, 533 |
| DdeI | CTNAG | 2 cut(s) | 168, 233 |
| DpnI | GATC | 6 cut(s) | 124, 263, 361, 367, 504, 522 |
| DpnII | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| Eco130I | CCWWGG | 2 cut(s) | 160, 636 |
| Eco24I | GRGCYC | 1 cut(s) | 856 |
| Eco31I | GGTCTC | 3 cut(s) | 143, 242, 281 |
| Eco47I | GGWCC | 1 cut(s) | 452 |
| Eco91I | GGTNACC | 1 cut(s) | 577 |
| EcoO109I | RGGNCCY | 1 cut(s) | 316 |
| EcoO65I | GGTNACC | 1 cut(s) | 577 |
| EcoRII | CCWGG | 1 cut(s) | 85 |
| EcoT14I | CCWWGG | 2 cut(s) | 160, 636 |
| EcoT22I | ATGCAT | 2 cut(s) | 67, 769 |
| EcoT38I | GRGCYC | 1 cut(s) | 856 |
| ErhI | CCWWGG | 2 cut(s) | 160, 636 |
| FaeI | CATG | 7 cut(s) | 69, 104, 164, 196, 497, 527, 536 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 129, 161 |
| FatI | CATG | 7 cut(s) | 65, 100, 160, 192, 493, 523, 532 |
| FbaI | TGATCA | 1 cut(s) | 520 |
| FblI | GTMKAC | 1 cut(s) | 567 |
| FokI | GGATG | 2 cut(s) | 281, 572 |
| FriOI | GRGCYC | 1 cut(s) | 856 |
| FspBI | CTAG | 3 cut(s) | 363, 470, 937 |
| GsuI | CTGGAG | 2 cut(s) | 65, 108 |
| HaeIII | GGCC | 3 cut(s) | 84, 318, 671 |
| HapII | CCGG | 1 cut(s) | 672 |
| Hin1II | CATG | 7 cut(s) | 69, 104, 164, 196, 497, 527, 536 |
| HincII | GTYRAC | 2 cut(s) | 114, 568 |
| HindII | GTYRAC | 2 cut(s) | 114, 568 |
| HindIII | AAGCTT | 2 cut(s) | 138, 230 |
| HinfI | GANTC | 3 cut(s) | 196, 201, 426 |
| HpaI | GTTAAC | 1 cut(s) | 114 |
| HpaII | CCGG | 1 cut(s) | 672 |
| HphI | GGTGA | 2 cut(s) | 619, 677 |
| Hpy166II | GTNNAC | 2 cut(s) | 114, 568 |
| Hpy188I | TCNGA | 3 cut(s) | 357, 599, 678 |
| Hpy188III | TCNNGA | 5 cut(s) | 44, 193, 363, 500, 557 |
| Hpy8I | GTNNAC | 2 cut(s) | 114, 568 |
| HpyAV | CCTTC | 2 cut(s) | 440, 889 |
| HpyCH4III | ACNGT | 2 cut(s) | 15, 867 |
| HpyCH4V | TGCA | 8 cut(s) | 65, 74, 698, 743, 767, 773, 788, 821 |
| HpyF3I | CTNAG | 2 cut(s) | 168, 233 |
| Hsp92II | CATG | 7 cut(s) | 69, 104, 164, 196, 497, 527, 536 |
| Ksp22I | TGATCA | 1 cut(s) | 520 |
| KspAI | GTTAAC | 1 cut(s) | 114 |
| Kzo9I | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| LmnI | GCTCC | 3 cut(s) | 89, 102, 532 |
| LweI | GCATC | 3 cut(s) | 194, 285, 776 |
| MaeI | CTAG | 3 cut(s) | 363, 470, 937 |
| MaeIII | GTNAC | 3 cut(s) | 409, 577, 607 |
| MalI | GATC | 6 cut(s) | 124, 263, 361, 367, 504, 522 |
| MboI | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| MboII | GAAGA | 6 cut(s) | 304, 334, 458, 466, 798, 865 |
| MflI | RGATCY | 4 cut(s) | 122, 261, 359, 365 |
| MhlI | GDGCHC | 2 cut(s) | 221, 856 |
| MluCI | AATT | 3 cut(s) | 456, 810, 841 |
| MlyI | GAGTC | 2 cut(s) | 190, 195 |
| MmeI | TCCRAC | 2 cut(s) | 239, 760 |
| MnlI | CCTC | 5 cut(s) | 40, 380, 540, 568, 661 |
| Mph1103I | ATGCAT | 2 cut(s) | 67, 769 |
| MseI | TTAA | 1 cut(s) | 113 |
| MspA1I | CMGCKG | 3 cut(s) | 172, 749, 833 |
| MspI | CCGG | 1 cut(s) | 672 |
| MspR9I | CCNGG | 1 cut(s) | 87 |
| Mva1269I | GAATGC | 1 cut(s) | 67 |
| MvaI | CCWGG | 1 cut(s) | 87 |
| NcoI | CCATGG | 1 cut(s) | 160 |
| NdeII | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| NlaIII | CATG | 7 cut(s) | 69, 104, 164, 196, 497, 527, 536 |
| NlaIV | GGNNCC | 2 cut(s) | 124, 317 |
| NmuCI | GTSAC | 1 cut(s) | 607 |
| NsiI | ATGCAT | 2 cut(s) | 67, 769 |
| PagI | TCATGA | 1 cut(s) | 192 |
| PctI | GAATGC | 1 cut(s) | 67 |
| PfeI | GAWTC | 1 cut(s) | 426 |
| PleI | GAGTC | 2 cut(s) | 190, 195 |
| PpsI | GAGTC | 2 cut(s) | 190, 195 |
| Psp6I | CCWGG | 1 cut(s) | 85 |
| PspEI | GGTNACC | 1 cut(s) | 577 |
| PspGI | CCWGG | 1 cut(s) | 85 |
| PspN4I | GGNNCC | 2 cut(s) | 124, 317 |
| PspPI | GGNCC | 3 cut(s) | 83, 316, 452 |
| PstI | CTGCAG | 3 cut(s) | 76, 700, 745 |
| PstNI | CAGNNNCTG | 1 cut(s) | 749 |
| PsuI | RGATCY | 4 cut(s) | 122, 261, 359, 365 |
| PvuII | CAGCTG | 2 cut(s) | 172, 749 |
| SalI | GTCGAC | 1 cut(s) | 566 |
| SaqAI | TTAA | 1 cut(s) | 113 |
| Sau3AI | GATC | 6 cut(s) | 122, 261, 359, 365, 502, 520 |
| Sau96I | GGNCC | 3 cut(s) | 83, 316, 452 |
| SchI | GAGTC | 2 cut(s) | 190, 195 |
| ScrFI | CCNGG | 1 cut(s) | 87 |
| SduI | GDGCHC | 2 cut(s) | 221, 856 |
| SfaNI | GCATC | 3 cut(s) | 194, 285, 776 |
| SfcI | CTRYAG | 4 cut(s) | 72, 696, 741, 921 |
| SinI | GGWCC | 1 cut(s) | 452 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| Sse9I | AATT | 3 cut(s) | 456, 810, 841 |
| SsiI | CCGC | 2 cut(s) | 729, 833 |
| SspMI | CTAG | 3 cut(s) | 363, 470, 937 |
| StyD4I | CCNGG | 1 cut(s) | 85 |
| StyI | CCWWGG | 2 cut(s) | 160, 636 |
| TaaI | ACNGT | 2 cut(s) | 15, 867 |
| TaqI | TCGA | 3 cut(s) | 6, 199, 567 |
| TasI | AATT | 3 cut(s) | 456, 810, 841 |
| TauI | GCSGC | 2 cut(s) | 731, 836 |
| TfiI | GAWTC | 1 cut(s) | 426 |
| Tru1I | TTAA | 1 cut(s) | 113 |
| Tru9I | TTAA | 1 cut(s) | 113 |
| TscAI | CASTG | 3 cut(s) | 81, 637, 870 |
| TseFI | GTSAC | 1 cut(s) | 607 |
| Tsp45I | GTSAC | 1 cut(s) | 607 |
| TspDTI | ATGAA | 1 cut(s) | 459 |
| TspRI | CASTG | 3 cut(s) | 81, 637, 870 |
| VpaK11BI | GGWCC | 1 cut(s) | 452 |
| XbaI | TCTAGA | 1 cut(s) | 362 |
| XmiI | GTMKAC | 1 cut(s) | 567 |
| XspI | CTAG | 3 cut(s) | 363, 470, 937 |
| Zsp2I | ATGCAT | 2 cut(s) | 67, 769 |