Ripening-related protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 903 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 758 |
| AciI | CCGC | 4 cut(s) | 162, 321, 645, 800 |
| AclWI | GGATC | 2 cut(s) | 421, 904 |
| AcoI | YGGCCR | 1 cut(s) | 948 |
| AcuI | CTGAAG | 1 cut(s) | 609 |
| AcvI | CACGTG | 1 cut(s) | 258 |
| AdeI | CACNNNGTG | 1 cut(s) | 943 |
| AfaI | GTAC | 6 cut(s) | 245, 359, 404, 728, 842, 887 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 191, 275, 674, 758 |
| AflIII | ACRYGT | 2 cut(s) | 255, 617 |
| AjnI | CCWGG | 2 cut(s) | 190, 673 |
| AluBI | AGCT | 5 cut(s) | 143, 309, 626, 792, 1058 |
| AluI | AGCT | 5 cut(s) | 143, 309, 626, 792, 1058 |
| Alw21I | GWGCWC | 2 cut(s) | 263, 746 |
| Alw26I | GTCTC | 1 cut(s) | 35 |
| AlwI | GGATC | 2 cut(s) | 421, 904 |
| AoxI | GGCC | 3 cut(s) | 288, 817, 948 |
| ApeKI | GCWGC | 2 cut(s) | 225, 456 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 80 |
| AspLEI | GCGC | 1 cut(s) | 456 |
| AspS9I | GGNCC | 2 cut(s) | 335, 818 |
| AsuHPI | GGTGA | 4 cut(s) | 255, 335, 738, 818 |
| AsuII | TTCGAA | 1 cut(s) | 312 |
| AvaII | GGWCC | 1 cut(s) | 335 |
| AxyI | CCTNAGG | 1 cut(s) | 577 |
| BaeGI | GKGCMC | 1 cut(s) | 939 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 394, 427, 877, 910 |
| BalI | TGGCCA | 1 cut(s) | 950 |
| BanI | GGYRCC | 1 cut(s) | 903 |
| BbrPI | CACGTG | 1 cut(s) | 258 |
| BbsI | GAAGAC | 2 cut(s) | 597, 699 |
| Bbv12I | GWGCWC | 2 cut(s) | 263, 746 |
| BbvI | GCAGC | 2 cut(s) | 212, 468 |
| BccI | CCATC | 7 cut(s) | 320, 344, 346, 393, 827, 829, 876 |
| BciT130I | CCWGG | 2 cut(s) | 192, 675 |
| BclI | TGATCA | 1 cut(s) | 994 |
| BcoDI | GTCTC | 1 cut(s) | 35 |
| BfaI | CTAG | 2 cut(s) | 36, 104 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 560, 1043 |
| BisI | GCNGC | 2 cut(s) | 226, 457 |
| BlpI | GCTNAGC | 1 cut(s) | 627 |
| BlsI | GCNGC | 2 cut(s) | 227, 458 |
| Bme1390I | CCNGG | 2 cut(s) | 192, 675 |
| Bme18I | GGWCC | 1 cut(s) | 335 |
| BmgT120I | GGNCC | 2 cut(s) | 335, 818 |
| BmiI | GGNNCC | 1 cut(s) | 905 |
| BmrFI | CCNGG | 2 cut(s) | 192, 675 |
| BmrI | ACTGGG | 2 cut(s) | 607, 1090 |
| BmsI | GCATC | 7 cut(s) | 21, 28, 491, 496, 541, 979, 1024 |
| BmuI | ACTGGG | 2 cut(s) | 607, 1090 |
| BpiI | GAAGAC | 2 cut(s) | 597, 699 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 200, 232, 473, 505, 956, 988 |
| BpmI | CTGGAG | 2 cut(s) | 657, 843 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 627 |
| Bpu14I | TTCGAA | 1 cut(s) | 312 |
| BsaAI | YACGTR | 1 cut(s) | 258 |
| BsaBI | GATNNNNATC | 1 cut(s) | 993 |
| BsaJI | CCNNGG | 4 cut(s) | 495, 558, 951, 1041 |
| BsaWI | WCCGGW | 1 cut(s) | 878 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 191, 275, 674, 758 |
| Bse1I | ACTGG | 5 cut(s) | 377, 400, 602, 860, 1085 |
| Bse21I | CCTNAGG | 1 cut(s) | 577 |
| Bse3DI | GCAATG | 2 cut(s) | 474, 638 |
| Bse8I | GATNNNNATC | 1 cut(s) | 993 |
| BseBI | CCWGG | 2 cut(s) | 192, 675 |
| BseDI | CCNNGG | 4 cut(s) | 495, 558, 951, 1041 |
| BseGI | GGATG | 8 cut(s) | 217, 404, 484, 506, 556, 887, 967, 989 |
| BseJI | GATNNNNATC | 1 cut(s) | 993 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 191, 275, 674, 758 |
| BseMI | GCAATG | 2 cut(s) | 474, 638 |
| BseMII | CTCAG | 3 cut(s) | 299, 641, 969 |
| BseNI | ACTGG | 5 cut(s) | 377, 400, 602, 860, 1085 |
| BseRI | GAGGAG | 1 cut(s) | 345 |
| BseSI | GKGCMC | 1 cut(s) | 939 |
| BseXI | GCAGC | 2 cut(s) | 212, 468 |
| BshFI | GGCC | 3 cut(s) | 290, 819, 950 |
| BshNI | GGYRCC | 1 cut(s) | 903 |
| BsiHKAI | GWGCWC | 2 cut(s) | 263, 746 |
| BsiSI | CCGG | 2 cut(s) | 717, 879 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 191, 275, 674, 758 |
| BsmAI | GTCTC | 1 cut(s) | 35 |
| BsnI | GGCC | 3 cut(s) | 290, 819, 950 |
| Bsp119I | TTCGAA | 1 cut(s) | 312 |
| Bsp1286I | GDGCHC | 3 cut(s) | 263, 746, 939 |
| Bsp143I | GATC | 3 cut(s) | 413, 896, 994 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 627 |
| Bsp19I | CCATGG | 1 cut(s) | 951 |
| BspACI | CCGC | 4 cut(s) | 162, 321, 645, 800 |
| BspANI | GGCC | 3 cut(s) | 290, 819, 950 |
| BspCNI | CTCAG | 3 cut(s) | 298, 640, 970 |
| BspHI | TCATGA | 1 cut(s) | 997 |
| BspLI | GGNNCC | 1 cut(s) | 905 |
| BspPI | GGATC | 2 cut(s) | 421, 904 |
| BspT104I | TTCGAA | 1 cut(s) | 312 |
| BspT107I | GGYRCC | 1 cut(s) | 903 |
| BsrDI | GCAATG | 2 cut(s) | 474, 638 |
| BsrI | ACTGG | 5 cut(s) | 377, 400, 602, 860, 1085 |
| BssECI | CCNNGG | 4 cut(s) | 495, 558, 951, 1041 |
| BssMI | GATC | 3 cut(s) | 413, 896, 994 |
| BssT1I | CCWWGG | 3 cut(s) | 558, 951, 1041 |
| Bst2UI | CCWGG | 2 cut(s) | 192, 675 |
| Bst4CI | ACNGT | 2 cut(s) | 707, 929 |
| Bst6I | CTCTTC | 1 cut(s) | 71 |
| BstBAI | YACGTR | 1 cut(s) | 258 |
| BstBI | TTCGAA | 1 cut(s) | 312 |
| BstC8I | GCNNGC | 1 cut(s) | 319 |
| BstDEI | CTNAG | 8 cut(s) | 285, 577, 607, 627, 768, 978, 1090, 1113 |
| BstDSI | CCRYGG | 1 cut(s) | 951 |
| BstF5I | GGATG | 8 cut(s) | 217, 404, 484, 506, 556, 887, 967, 989 |
| BstHHI | GCGC | 1 cut(s) | 456 |
| BstKTI | GATC | 3 cut(s) | 416, 899, 997 |
| BstMAI | GTCTC | 1 cut(s) | 35 |
| BstMBI | GATC | 3 cut(s) | 413, 896, 994 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 135, 560, 1043 |
| BstNI | CCWGG | 2 cut(s) | 192, 675 |
| BstNSI | RCATGY | 1 cut(s) | 621 |
| BstSCI | CCNGG | 2 cut(s) | 190, 673 |
| BstSLI | GKGCMC | 1 cut(s) | 939 |
| BstV1I | GCAGC | 2 cut(s) | 212, 468 |
| BstV2I | GAAGAC | 2 cut(s) | 597, 699 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 958 |
| Bsu36I | CCTNAGG | 1 cut(s) | 577 |
| BsuRI | GGCC | 3 cut(s) | 290, 819, 950 |
| BtgI | CCRYGG | 1 cut(s) | 951 |
| BtgZI | GCGATG | 1 cut(s) | 519 |
| BtsCI | GGATG | 8 cut(s) | 217, 404, 484, 506, 556, 887, 967, 989 |
| Cac8I | GCNNGC | 1 cut(s) | 319 |
| CciI | TCATGA | 1 cut(s) | 997 |
| CfoI | GCGC | 1 cut(s) | 456 |
| Cfr13I | GGNCC | 2 cut(s) | 335, 818 |
| Csp6I | GTAC | 6 cut(s) | 244, 358, 403, 727, 841, 886 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 456, 491, 583, 618, 1066, 1101 |
| CviAII | CATG | 5 cut(s) | 515, 618, 952, 998, 1101 |
| CviQI | GTAC | 6 cut(s) | 244, 358, 403, 727, 841, 886 |
| DdeI | CTNAG | 8 cut(s) | 285, 577, 607, 627, 768, 978, 1090, 1113 |
| DpnI | GATC | 3 cut(s) | 415, 898, 996 |
| DpnII | GATC | 3 cut(s) | 413, 896, 994 |
| DraIII | CACNNNGTG | 1 cut(s) | 943 |
| EaeI | YGGCCR | 1 cut(s) | 948 |
| Eam1104I | CTCTTC | 1 cut(s) | 71 |
| EarI | CTCTTC | 1 cut(s) | 71 |
| Eco130I | CCWWGG | 3 cut(s) | 558, 951, 1041 |
| Eco147I | AGGCCT | 1 cut(s) | 290 |
| Eco32I | GATATC | 1 cut(s) | 613 |
| Eco47I | GGWCC | 1 cut(s) | 335 |
| Eco57I | CTGAAG | 1 cut(s) | 609 |
| Eco72I | CACGTG | 1 cut(s) | 258 |
| Eco81I | CCTNAGG | 1 cut(s) | 577 |
| EcoRII | CCWGG | 2 cut(s) | 190, 673 |
| EcoRV | GATATC | 1 cut(s) | 613 |
| EcoT14I | CCWWGG | 3 cut(s) | 558, 951, 1041 |
| EcoT22I | ATGCAT | 1 cut(s) | 14 |
| ErhI | CCWWGG | 3 cut(s) | 558, 951, 1041 |
| FaeI | CATG | 5 cut(s) | 518, 621, 955, 1001, 1104 |
| FaiI | YATR | 9 cut(s) | 10, 253, 516, 619, 736, 775, 953, 999, 1102 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 68, 100 |
| FatI | CATG | 5 cut(s) | 514, 617, 951, 997, 1100 |
| FauI | CCCGC | 1 cut(s) | 793 |
| FbaI | TGATCA | 1 cut(s) | 994 |
| Fnu4HI | GCNGC | 2 cut(s) | 226, 457 |
| FokI | GGATG | 8 cut(s) | 224, 411, 491, 513, 563, 894, 974, 996 |
| Fsp4HI | GCNGC | 2 cut(s) | 226, 457 |
| FspBI | CTAG | 2 cut(s) | 36, 104 |
| GlaI | GCGC | 1 cut(s) | 455 |
| GluI | GCNGC | 2 cut(s) | 226, 457 |
| GsuI | CTGGAG | 2 cut(s) | 657, 843 |
| HaeIII | GGCC | 3 cut(s) | 290, 819, 950 |
| HapII | CCGG | 2 cut(s) | 717, 879 |
| HhaI | GCGC | 1 cut(s) | 456 |
| Hin1II | CATG | 5 cut(s) | 518, 621, 955, 1001, 1104 |
| Hin6I | GCGC | 1 cut(s) | 454 |
| HinP1I | GCGC | 1 cut(s) | 454 |
| HindIII | AAGCTT | 1 cut(s) | 1056 |
| HinfI | GANTC | 6 cut(s) | 215, 283, 438, 488, 698, 971 |
| HpaII | CCGG | 2 cut(s) | 717, 879 |
| HphI | GGTGA | 4 cut(s) | 255, 335, 738, 818 |
| Hpy188I | TCNGA | 7 cut(s) | 220, 343, 437, 589, 703, 826, 1108 |
| Hpy188III | TCNNGA | 4 cut(s) | 276, 568, 998, 1051 |
| HpyAV | CCTTC | 3 cut(s) | 159, 642, 654 |
| HpyCH4III | ACNGT | 2 cut(s) | 707, 929 |
| HpyCH4IV | ACGT | 1 cut(s) | 257 |
| HpyCH4V | TGCA | 5 cut(s) | 12, 201, 228, 509, 711 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 135, 560, 1043 |
| HpyF3I | CTNAG | 8 cut(s) | 285, 577, 607, 627, 768, 978, 1090, 1113 |
| HpySE526I | ACGT | 1 cut(s) | 257 |
| Hsp92II | CATG | 5 cut(s) | 518, 621, 955, 1001, 1104 |
| HspAI | GCGC | 1 cut(s) | 454 |
| Ksp22I | TGATCA | 1 cut(s) | 994 |
| Kzo9I | GATC | 3 cut(s) | 413, 896, 994 |
| Lsp1109I | GCAGC | 2 cut(s) | 212, 468 |
| LweI | GCATC | 7 cut(s) | 21, 28, 491, 496, 541, 979, 1024 |
| MaeI | CTAG | 2 cut(s) | 36, 104 |
| MaeII | ACGT | 1 cut(s) | 257 |
| MaeIII | GTNAC | 4 cut(s) | 485, 683, 806, 968 |
| MalI | GATC | 3 cut(s) | 415, 898, 996 |
| MboI | GATC | 3 cut(s) | 413, 896, 994 |
| MboII | GAAGA | 5 cut(s) | 76, 88, 190, 602, 704 |
| MhlI | GDGCHC | 3 cut(s) | 263, 746, 939 |
| MlsI | TGGCCA | 1 cut(s) | 950 |
| MluCI | AATT | 3 cut(s) | 25, 123, 921 |
| MluNI | TGGCCA | 1 cut(s) | 950 |
| MlyI | GAGTC | 5 cut(s) | 209, 277, 482, 692, 965 |
| Mox20I | TGGCCA | 1 cut(s) | 950 |
| Mph1103I | ATGCAT | 1 cut(s) | 14 |
| MroXI | GAANNNNTTC | 1 cut(s) | 80 |
| MscI | TGGCCA | 1 cut(s) | 950 |
| MseI | TTAA | 3 cut(s) | 426, 909, 924 |
| MslI | CAYNNNNRTG | 5 cut(s) | 256, 343, 739, 826, 956 |
| Msp20I | TGGCCA | 1 cut(s) | 950 |
| MspI | CCGG | 2 cut(s) | 717, 879 |
| MspR9I | CCNGG | 2 cut(s) | 192, 675 |
| MvaI | CCWGG | 2 cut(s) | 192, 675 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 135, 560, 1043 |
| NcoI | CCATGG | 1 cut(s) | 951 |
| NdeII | GATC | 3 cut(s) | 413, 896, 994 |
| NlaIII | CATG | 5 cut(s) | 518, 621, 955, 1001, 1104 |
| NlaIV | GGNNCC | 1 cut(s) | 905 |
| NmuCI | GTSAC | 3 cut(s) | 485, 806, 968 |
| NsiI | ATGCAT | 1 cut(s) | 14 |
| NspI | RCATGY | 1 cut(s) | 621 |
| NspV | TTCGAA | 1 cut(s) | 312 |
| PagI | TCATGA | 1 cut(s) | 997 |
| PceI | AGGCCT | 1 cut(s) | 290 |
| PciI | ACATGT | 1 cut(s) | 617 |
| PdmI | GAANNNNTTC | 1 cut(s) | 80 |
| PfeI | GAWTC | 1 cut(s) | 438 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 758 |
| PfoI | TCCNGGA | 2 cut(s) | 190, 673 |
| PkrI | GCNGC | 2 cut(s) | 227, 458 |
| PleI | GAGTC | 5 cut(s) | 209, 277, 482, 692, 965 |
| PmaCI | CACGTG | 1 cut(s) | 258 |
| PmlI | CACGTG | 1 cut(s) | 258 |
| PpsI | GAGTC | 5 cut(s) | 209, 277, 482, 692, 965 |
| Ppu21I | YACGTR | 1 cut(s) | 258 |
| PscI | ACATGT | 1 cut(s) | 617 |
| Psp6I | CCWGG | 2 cut(s) | 190, 673 |
| PspCI | CACGTG | 1 cut(s) | 258 |
| PspGI | CCWGG | 2 cut(s) | 190, 673 |
| PspN4I | GGNNCC | 1 cut(s) | 905 |
| PspPI | GGNCC | 2 cut(s) | 335, 818 |
| RsaI | GTAC | 6 cut(s) | 245, 359, 404, 728, 842, 887 |
| RsaNI | GTAC | 6 cut(s) | 244, 358, 403, 727, 841, 886 |
| RseI | CAYNNNNRTG | 5 cut(s) | 256, 343, 739, 826, 956 |
| SaqAI | TTAA | 3 cut(s) | 426, 909, 924 |
| SatI | GCNGC | 2 cut(s) | 226, 457 |
| Sau3AI | GATC | 3 cut(s) | 413, 896, 994 |
| Sau96I | GGNCC | 2 cut(s) | 335, 818 |
| SchI | GAGTC | 5 cut(s) | 209, 277, 482, 692, 965 |
| ScrFI | CCNGG | 2 cut(s) | 192, 675 |
| SduI | GDGCHC | 3 cut(s) | 263, 746, 939 |
| SfaNI | GCATC | 7 cut(s) | 21, 28, 491, 496, 541, 979, 1024 |
| SfuI | TTCGAA | 1 cut(s) | 312 |
| SinI | GGWCC | 1 cut(s) | 335 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 256, 343, 739, 826, 956 |
| Sse9I | AATT | 3 cut(s) | 25, 123, 921 |
| SseBI | AGGCCT | 1 cut(s) | 290 |
| SsiI | CCGC | 4 cut(s) | 162, 321, 645, 800 |
| SspMI | CTAG | 2 cut(s) | 36, 104 |
| StuI | AGGCCT | 1 cut(s) | 290 |
| StyD4I | CCNGG | 2 cut(s) | 190, 673 |
| StyI | CCWWGG | 3 cut(s) | 558, 951, 1041 |
| TaaI | ACNGT | 2 cut(s) | 707, 929 |
| TaiI | ACGT | 1 cut(s) | 260 |
| TaqI | TCGA | 1 cut(s) | 312 |
| TasI | AATT | 3 cut(s) | 25, 123, 921 |
| TfiI | GAWTC | 1 cut(s) | 438 |
| Tru1I | TTAA | 3 cut(s) | 426, 909, 924 |
| Tru9I | TTAA | 3 cut(s) | 426, 909, 924 |
| TseFI | GTSAC | 3 cut(s) | 485, 806, 968 |
| TseI | GCWGC | 2 cut(s) | 225, 456 |
| Tsp45I | GTSAC | 3 cut(s) | 485, 806, 968 |
| TspDTI | ATGAA | 1 cut(s) | 89 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 758 |
| VpaK11BI | GGWCC | 1 cut(s) | 335 |
| XceI | RCATGY | 1 cut(s) | 621 |
| XmnI | GAANNNNTTC | 1 cut(s) | 80 |
| XspI | CTAG | 2 cut(s) | 36, 104 |
| Zsp2I | ATGCAT | 1 cut(s) | 14 |