Rorug01G0112300

Ripening-related protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000242
Physical Location & Seq
Reverse (-)
19966546 .. 19976850
10305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0112300.1

Sequence Viewer

Length: 1596 bp
ATGGATTTGAAAGGCAGCAATAGTAGTAGTAGTATTAAGAAGAGAGAACTGCCGTTTCTGGTTCTCTACGCTGCTGCTTTCTACGCCTTCATCATCCATCGATCGCTTCAACTATCTCGCGATCATTATACCAAATTATTGGGCTTGCGGCCTGGATGGCTCACACCTCAATGCCTCAATGATGCGTCTGATGCTCAATGGAGAAACTTGCGAGGAAATTTACCTGTTCTCACCATTGTTTTCACAATATTTACGTCAATCGCTCAGTTGTCGAGGGCATATTTTCATTTGAAAGCCAGAGGGATGTCCATTGTTTGGCTTTTGATTTCATTCACGTACCTATCGTATCTGCATGGAGCCTGCATCATATTTATCCTCTCAATCGCTTCAGTGAATTTTCTTTTGGTAAAGATATTTGCTCGAACGAAGTACTTCTCTTTTGTATTCTGGAGTTTCAACATATTCTTTCTTCTCTGCAATCGTATTTATGAAGGATACTCATTCTCCTCATTTGGGGAGCACTGGGCATTTTTGGACAACTTTCGGGGCACCTTTAGATGGCAAATTTGCTTTAACTTTGTTGTTTTGCGCATGGTAAGCTTTGGCTATGATTATCATTGGGCTCATCAAGATTCTCGTTTTGACCATGAGAAACATATTCAGCGTTGCAATATTTGTAGAGCCGGCAAAACTTGTTACCAAGTGTTACAGGAGAGAGGTGTCCAGAGCGACAATTTTTCCTTTATCACATACCTTTCTTATCTGGCATATGCACCTCTTTATCTTGCTGGGCCAATTCTAAGCTTCAATGCCTTTGCTTCACAGCTGGATATTCCTCAAAATAACTATTCAGTTAGAGACACTACTTGGTACGGTTTGCGTTGGGTTTTCAGTCTCCTTCTGATGGAACTAATGACACATCTCTTTTACTACAATGCCTTTGCAATCAGCGGCATGTGGAAACAGTTATATCCCGTAGATGTGTTTATTATTGGATATGGGGTTTTAAACTTTATGTGGCTAAAGTTCTTTCTGATATGGCGCTATTTCCGGTTCTGGTCACTGATCTGTGGCATTGAGGTCCCTGAGAATATGCCAAAGTGTGTAAACAATTGCTACAACTTGGAAAGCTTTTGGAAGAACTGGCATGCTTCCTACAACAAATGGCTTGTGAGGTATTTGTACATACCTCTTGGCGGCTCTCAGAGAAAGCTTCTCAATGTGTGGGTTGTATTCACATTCGTTGCCATTTGGCATGATCTAGAGTGGAAGCTTCTTTCATGGGCATGGCTGACATGCGTATTCTTTATTCCGGAAATAATCTTCAAATCAGCAGCCTCTGCATTTCAGGCCAAGACTGCTCTTGGGGAGTTTATTGTTCGTGAATTTAGTGCGGCTGCTGGGGCGGTTACAATCACTTGCCTCATGGTTGCAAACCTTGTTGGTTTTGTGATTGGACCATCTGGGATTAGTTGGTTGGTTTCTCAATTCCTTAGCAGAGAAGGATTGCCGGTCTTGGCCGGCATGCTTTTGACATTTTATGTTGGGACAAAGCTTATGTTCCACATCCGTGATGCAAAACAAAGTACCCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

531

Amino Acids

62.02

Weight (kDa)

9.34

Isoelectric Point (pI)

35.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MBOAT PF03062 193 - 455 3.3e-41 MBOAT, membrane-bound O-acyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000242)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g06580 FvH4_7g13910 FvH4_7g13921 FvH4_7g13931 FvH4_7g13940 FvH4_7g13941 FvH4_7g13950 FvH4_7g13963 FvH4_7g13964 FvH4_7g13965 FvH4_7g19470
malus_domestica MD01G1055500.v1.1 MD01G1055800.v1.1 MD01G1055900.v1.1 MD01G1056000.v1.1 MD01G1056100.v1.1 MD07G1111100.v1.1 MD07G1139700.v1.1 MD07G1139800.v1.1
prunus_persica Prupe.2G165600_v2.0.a1 Prupe.2G165700_v2.0.a1 Prupe.2G165800_v2.0.a1 Prupe.2G165900_v2.0.a1 Prupe.2G166000_v2.0.a1 Prupe.2G166700_v2.0.a1 Prupe.2G166800_v2.0.a1
pyrus_communis pycom01g08120 pycom07g09590 pycom07g13780
rosa_chinensis RchiOBHm_Chr1g0333851 RchiOBHm_Chr1g0333861 RchiOBHm_Chr1g0334061 RchiOBHm_Chr1g0335111 RchiOBHm_Chr1g0335191 RchiOBHm_Chr1g0340801 RchiOBHm_Chr1g0348301 RchiOBHm_Chr1g0353601 RchiOBHm_Chr1g0354571 RchiOBHm_Chr1g0354621 RchiOBHm_Chr7g0221941 RchiOBHm_Chr7g0232861 RchiOBHm_Chr7g0232891 RchiOBHm_Chr7g0232951 RchiOBHm_Chr7g0232981 RchiOBHm_Chr7g0233011
rosa_laevigata RLG00000001309 RLG00000001311 RLG00000001312 RLG00000028195 RLG00000028197 RLG00000028198 RLG00000028207 RLG00000028217 RLG00000028219 RLG00000028668 RLG00000029045 RLG00000029479 RLG00000029482
rosa_multiflora Rmu_co7977860.1_g000001 Rmu_co8392301.1_g000001 Rmu_co8424661.1_g000001 Rmu_sc0000026.1_g000015 Rmu_sc0000942.1_g000020 Rmu_sc0001211.1_g000118 Rmu_sc0002200.1_g000057 Rmu_sc0002722.1_g000008 Rmu_sc0002737.1_g000002 Rmu_sc0003690.1_g000020 Rmu_sc0003690.1_g000021 Rmu_sc0005065.1_g000045 Rmu_sc0005947.1_g000037 Rmu_sc0006632.1_g000003 Rmu_sc0006746.1_g000008 Rmu_sc0006746.1_g000018 Rmu_sc0009527.1_g000002 Rmu_sc0011926.1_g000002 Rmu_sc0015525.1_g000007 Rmu_sc0020815.1_g000003 Rmu_sc0022127.1_g000001 Rmu_sc0026161.1_g000001 Rmu_sc0029005.1_g000001 Rmu_ssc0000018.1_g000018 Rmu_ssc0000018.1_g000022
rosa_roxburghii Rroxscaffold_3G00227810 Rroxscaffold_3G00227830 Rroxscaffold_3G00227840 Rroxscaffold_4G00300900 Rroxscaffold_4G00300910 Rroxscaffold_4G00300920 Rroxscaffold_4G00300990 Rroxscaffold_4G00307030 Rroxscaffold_4G00316180
rosa_rugosa Rorug01G0112300 Rorug01G0112700 Rorug01G0120900 Rorug01G0161200.1 Rorug01G0236500 Rorug01G0243300 Rorug01G0243400 Rorug05G0135300 Rorug07G0276400 Rorug07G0276400 Rorug07G0276500 Rorug07G0276600 Rorug07G0277700
rosa_samantha Rh1AG134800 Rh1AG136600 Rh1AG142000 Rh1AG176400 Rh1AG211400 Rh1AG248900 Rh1AG254300 Rh1AG254600 Rh1DG141700 Rh1DG146700 Rh1DG147000 Rh1DG176000 Rh1DG207500 Rh1DG245700 Rh1DG251600 Rh1DG252200 Rh1DG253000 Rh1DG253200 Rh7CG450500 Rh7CG450900 Rh7CG452200 Rh7DG421100 Rh7DG421200
rosa_wichuraiana Rw0G004720 Rw0G013980 Rw1G011770 Rw1G022200 Rw1G022240 Rw1G022250 Rw1G022270 Rw7G035640 Rw7G035650 Rw7G035680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 548
AccB7I CCANNNNNTGG 1 cut(s) 315
AccII CGCG 1 cut(s) 120
AccIII TCCGGA 1 cut(s) 1312
AciI CCGC 5 cut(s) 148, 951, 1197, 1394, 1406
AcoI YGGCCR 1 cut(s) 1518
AcsI RAATTY 4 cut(s) 217, 394, 564, 1385
AcuI CTGAAG 1 cut(s) 372
AfaI GTAC 5 cut(s) 338, 431, 872, 1184, 1588
AfiI CCNNNNNNNGG 5 cut(s) 315, 513, 558, 904, 1196
AgsI TTSAA 6 cut(s) 10, 110, 292, 457, 808, 1327
AjnI CCWGG 1 cut(s) 151
AjuI GAANNNNNNNTTGG 2 cut(s) 386, 418
AleI CACNNNNGTG 1 cut(s) 1569
AluBI AGCT 7 cut(s) 600, 804, 826, 1131, 1213, 1273, 1555
AluI AGCT 7 cut(s) 600, 804, 826, 1131, 1213, 1273, 1555
Alw21I GWGCWC 1 cut(s) 522
Alw26I GTCTC 2 cut(s) 852, 899
AlwNI CAGNNNCTG 1 cut(s) 1340
Aor13HI TCCGGA 1 cut(s) 1312
AoxI GGCC 4 cut(s) 149, 791, 1350, 1518
ApeKI GCWGC 5 cut(s) 15, 71, 74, 1334, 1397
ApoI RAATTY 4 cut(s) 217, 394, 564, 1385
Asp700I GAANNNNTTC 1 cut(s) 431
AspLEI GCGC 2 cut(s) 591, 1044
AspS9I GGNCC 3 cut(s) 791, 1081, 1457
AsuHPI GGTGA 1 cut(s) 223
AvaII GGWCC 2 cut(s) 1081, 1457
BaeGI GKGCMC 1 cut(s) 551
BanI GGYRCC 1 cut(s) 548
BanII GRGCYC 1 cut(s) 625
Bbv12I GWGCWC 1 cut(s) 522
BbvI GCAGC 5 cut(s) 27, 58, 61, 1346, 1384
BccI CCATC 5 cut(s) 105, 150, 552, 898, 1468
BceAI ACGGC 1 cut(s) 37
BciT130I CCWGG 1 cut(s) 153
BciVI GTATCC 1 cut(s) 488
BcoDI GTCTC 2 cut(s) 852, 899
BfaI CTAG 1 cut(s) 1262
BfoI RGCGCY 1 cut(s) 1045
BfuI GTATCC 1 cut(s) 488
BglI GCCNNNNNGGC 1 cut(s) 157
BisI GCNGC 9 cut(s) 16, 72, 75, 149, 952, 1198, 1335, 1395, 1398
BlsI GCNGC 9 cut(s) 17, 73, 76, 150, 953, 1199, 1336, 1396, 1399
BmcAI AGTACT 1 cut(s) 431
Bme1390I CCNGG 1 cut(s) 153
Bme18I GGWCC 2 cut(s) 1081, 1457
BmgT120I GGNCC 3 cut(s) 791, 1081, 1457
BmiI GGNNCC 3 cut(s) 358, 550, 1083
BmrFI CCNGG 1 cut(s) 153
BmrI ACTGGG 1 cut(s) 532
BmsI GCATC 4 cut(s) 172, 181, 372, 1564
BmuI ACTGGG 1 cut(s) 532
BpmI CTGGAG 1 cut(s) 469
Bpu10I CCTNAGC 1 cut(s) 1493
Bsa29I ATCGAT 1 cut(s) 100
BsaAI YACGTR 1 cut(s) 336
BsaWI WCCGGW 2 cut(s) 1050, 1312
BsaXI ACNNNNNCTCC 2 cut(s) 488, 518
Bsc4I CCNNNNNNNGG 5 cut(s) 315, 513, 558, 904, 1196
Bse118I RCCGGY 3 cut(s) 683, 1510, 1520
Bse1I ACTGG 2 cut(s) 527, 1148
BseAI TCCGGA 1 cut(s) 1312
BseBI CCWGG 1 cut(s) 153
BseCI ATCGAT 1 cut(s) 100
BseGI GGATG 4 cut(s) 93, 161, 309, 1566
BseLI CCNNNNNNNGG 5 cut(s) 315, 513, 558, 904, 1196
BseMII CTCAG 3 cut(s) 278, 1077, 1217
BseNI ACTGG 2 cut(s) 527, 1148
BseRI GAGGAG 1 cut(s) 496
BseSI GKGCMC 1 cut(s) 551
BseXI GCAGC 5 cut(s) 27, 58, 61, 1346, 1384
BseYI CCCAGC 2 cut(s) 788, 1400
Bsh1236I CGCG 1 cut(s) 120
Bsh1285I CGRYCG 1 cut(s) 104
BshFI GGCC 4 cut(s) 151, 793, 1352, 1520
BshNI GGYRCC 1 cut(s) 548
BshVI ATCGAT 1 cut(s) 100
BsiEI CGRYCG 1 cut(s) 104
BsiHKAI GWGCWC 1 cut(s) 522
BsiSI CCGG 5 cut(s) 684, 1051, 1313, 1511, 1521
BslFI GGGAC 2 cut(s) 1067, 1561
BslI CCNNNNNNNGG 5 cut(s) 315, 513, 558, 904, 1196
BsmAI GTCTC 2 cut(s) 852, 899
BsmFI GGGAC 2 cut(s) 1067, 1561
BsnI GGCC 4 cut(s) 151, 793, 1352, 1520
Bsp1286I GDGCHC 3 cut(s) 522, 551, 625
Bsp13I TCCGGA 1 cut(s) 1312
Bsp1407I TGTACA 1 cut(s) 1182
Bsp143I GATC 4 cut(s) 101, 121, 1065, 1258
Bsp68I TCGCGA 1 cut(s) 120
BspACI CCGC 5 cut(s) 148, 951, 1197, 1394, 1406
BspANI GGCC 4 cut(s) 151, 793, 1352, 1520
BspCNI CTCAG 3 cut(s) 277, 1078, 1216
BspDI ATCGAT 1 cut(s) 100
BspEI TCCGGA 1 cut(s) 1312
BspFNI CGCG 1 cut(s) 120
BspLI GGNNCC 3 cut(s) 358, 550, 1083
BspT107I GGYRCC 1 cut(s) 548
BsrFI RCCGGY 3 cut(s) 683, 1510, 1520
BsrGI TGTACA 1 cut(s) 1182
BsrI ACTGG 2 cut(s) 527, 1148
BssAI RCCGGY 3 cut(s) 683, 1510, 1520
BssMI GATC 4 cut(s) 101, 121, 1065, 1258
Bst2UI CCWGG 1 cut(s) 153
Bst4CI ACNGT 2 cut(s) 875, 966
Bst6I CTCTTC 1 cut(s) 35
BstAPI GCANNNNNTGC 1 cut(s) 1340
BstAUI TGTACA 1 cut(s) 1182
BstBAI YACGTR 1 cut(s) 336
BstC8I GCNNGC 6 cut(s) 146, 361, 685, 1149, 1522, 1526
BstDEI CTNAG 5 cut(s) 264, 800, 1086, 1203, 1493
BstF5I GGATG 4 cut(s) 93, 161, 309, 1566
BstFNI CGCG 1 cut(s) 120
BstH2I RGCGCY 1 cut(s) 1045
BstHHI GCGC 2 cut(s) 591, 1044
BstKTI GATC 4 cut(s) 104, 124, 1068, 1261
BstMAI GTCTC 2 cut(s) 852, 899
BstMBI GATC 4 cut(s) 101, 121, 1065, 1258
BstMCI CGRYCG 1 cut(s) 104
BstMWI GCNNNNNNNGC 8 cut(s) 83, 157, 191, 597, 1340, 1349, 1358, 1403
BstNI CCWGG 1 cut(s) 153
BstNSI RCATGY 4 cut(s) 958, 1151, 1299, 1528
BstSCI CCNGG 1 cut(s) 151
BstSLI GKGCMC 1 cut(s) 551
BstUI CGCG 1 cut(s) 120
BstV1I GCAGC 5 cut(s) 27, 58, 61, 1346, 1384
BstXI CCANNNNNNTGG 1 cut(s) 139
Bsu15I ATCGAT 1 cut(s) 100
BsuI GTATCC 1 cut(s) 488
BsuRI GGCC 4 cut(s) 151, 793, 1352, 1520
BsuTUI ATCGAT 1 cut(s) 100
BtsCI GGATG 4 cut(s) 93, 161, 309, 1566
BtsIMutI CAGTG 3 cut(s) 396, 520, 1061
BtuMI TCGCGA 1 cut(s) 120
Cac8I GCNNGC 6 cut(s) 146, 361, 685, 1149, 1522, 1526
CaiI CAGNNNCTG 1 cut(s) 1340
CfoI GCGC 2 cut(s) 591, 1044
Cfr10I RCCGGY 3 cut(s) 683, 1510, 1520
Cfr13I GGNCC 3 cut(s) 791, 1081, 1457
ClaI ATCGAT 1 cut(s) 100
CseI GACGC 1 cut(s) 174
Csp6I GTAC 5 cut(s) 337, 430, 871, 1183, 1587
CviQI GTAC 5 cut(s) 337, 430, 871, 1183, 1587
DdeI CTNAG 5 cut(s) 264, 800, 1086, 1203, 1493
DpnI GATC 4 cut(s) 103, 123, 1067, 1260
DpnII GATC 4 cut(s) 101, 121, 1065, 1258
DraI TTTAAA 1 cut(s) 1008
EaeI YGGCCR 1 cut(s) 1518
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Eco24I GRGCYC 1 cut(s) 625
Eco47I GGWCC 2 cut(s) 1081, 1457
Eco57I CTGAAG 1 cut(s) 372
EcoO109I RGGNCCY 1 cut(s) 1081
EcoRII CCWGG 1 cut(s) 151
EcoT38I GRGCYC 1 cut(s) 625
FaqI GGGAC 2 cut(s) 1067, 1561
FauNDI CATATG 1 cut(s) 769
Fnu4HI GCNGC 9 cut(s) 16, 72, 75, 149, 952, 1198, 1335, 1395, 1398
FokI GGATG 4 cut(s) 80, 168, 316, 1553
FriOI GRGCYC 1 cut(s) 625
Fsp4HI GCNGC 9 cut(s) 16, 72, 75, 149, 952, 1198, 1335, 1395, 1398
FspBI CTAG 1 cut(s) 1262
FspI TGCGCA 1 cut(s) 590
GlaI GCGC 2 cut(s) 590, 1043
GluI GCNGC 9 cut(s) 16, 72, 75, 149, 952, 1198, 1335, 1395, 1398
GsaI CCCAGC 2 cut(s) 792, 1404
GsuI CTGGAG 1 cut(s) 469
HaeII RGCGCY 1 cut(s) 1045
HaeIII GGCC 4 cut(s) 151, 793, 1352, 1520
HapII CCGG 5 cut(s) 684, 1051, 1313, 1511, 1521
HgaI GACGC 1 cut(s) 174
HhaI GCGC 2 cut(s) 591, 1044
Hin6I GCGC 2 cut(s) 589, 1042
HinP1I GCGC 2 cut(s) 589, 1042
HindIII AAGCTT 6 cut(s) 598, 802, 1129, 1211, 1271, 1553
HinfI GANTC 1 cut(s) 632
HpaII CCGG 5 cut(s) 684, 1051, 1313, 1511, 1521
HphI GGTGA 1 cut(s) 223
Hpy166II GTNNAC 1 cut(s) 1108
Hpy188I TCNGA 4 cut(s) 190, 903, 1035, 1206
Hpy188III TCNNGA 7 cut(s) 119, 448, 629, 724, 1262, 1313, 1382
Hpy8I GTNNAC 1 cut(s) 1108
HpyAV CCTTC 4 cut(s) 97, 485, 908, 1496
HpyCH4III ACNGT 2 cut(s) 875, 966
HpyCH4IV ACGT 2 cut(s) 254, 335
HpyCH4V TGCA 9 cut(s) 352, 363, 477, 669, 773, 944, 1343, 1433, 1577
HpyF10VI GCNNNNNNNGC 8 cut(s) 83, 157, 191, 597, 1340, 1349, 1358, 1403
HpyF3I CTNAG 5 cut(s) 264, 800, 1086, 1203, 1493
HpySE526I ACGT 2 cut(s) 254, 335
HspAI GCGC 2 cut(s) 589, 1042
Kpn2I TCCGGA 1 cut(s) 1312
KroI GCCGGC 2 cut(s) 683, 1520
KroNI GCCGGC 2 cut(s) 685, 1522
Kzo9I GATC 4 cut(s) 101, 121, 1065, 1258
LmnI GCTCC 2 cut(s) 356, 517
Lsp1109I GCAGC 5 cut(s) 27, 58, 61, 1346, 1384
LweI GCATC 4 cut(s) 172, 181, 372, 1564
MaeI CTAG 1 cut(s) 1262
MaeII ACGT 2 cut(s) 254, 335
MaeIII GTNAC 4 cut(s) 695, 705, 1059, 1408
MalI GATC 4 cut(s) 103, 123, 1067, 1260
MboI GATC 4 cut(s) 101, 121, 1065, 1258
MboII GAAGA 4 cut(s) 52, 461, 1150, 1315
MfeI CAATTG 1 cut(s) 1111
MhlI GDGCHC 3 cut(s) 522, 551, 625
MluCI AATT 9 cut(s) 134, 217, 394, 564, 733, 795, 1111, 1385, 1487
MroI TCCGGA 1 cut(s) 1312
MroNI GCCGGC 2 cut(s) 683, 1520
MroXI GAANNNNTTC 1 cut(s) 431
MseI TTAA 3 cut(s) 36, 573, 1007
MslI CAYNNNNRTG 3 cut(s) 169, 1285, 1569
MspA1I CMGCKG 2 cut(s) 826, 951
MspI CCGG 5 cut(s) 684, 1051, 1313, 1511, 1521
MspR9I CCNGG 1 cut(s) 153
MunI CAATTG 1 cut(s) 1111
MvaI CCWGG 1 cut(s) 153
MvnI CGCG 1 cut(s) 120
MwoI GCNNNNNNNGC 8 cut(s) 83, 157, 191, 597, 1340, 1349, 1358, 1403
NaeI GCCGGC 2 cut(s) 685, 1522
NdeI CATATG 1 cut(s) 769
NdeII GATC 4 cut(s) 101, 121, 1065, 1258
NgoMIV GCCGGC 2 cut(s) 683, 1520
NlaIV GGNNCC 3 cut(s) 358, 550, 1083
NmuCI GTSAC 1 cut(s) 1059
NruI TCGCGA 1 cut(s) 120
NsbI TGCGCA 1 cut(s) 590
NspI RCATGY 4 cut(s) 958, 1151, 1299, 1528
OliI CACNNNNGTG 1 cut(s) 1569
PaeI GCATGC 2 cut(s) 1151, 1528
PcsI WCGNNNNNNNCGW 1 cut(s) 341
PdiI GCCGGC 2 cut(s) 685, 1522
PdmI GAANNNNTTC 1 cut(s) 431
PfeI GAWTC 1 cut(s) 632
PflMI CCANNNNNTGG 1 cut(s) 315
PkrI GCNGC 9 cut(s) 17, 73, 76, 150, 953, 1199, 1336, 1396, 1399
Ple19I CGATCG 1 cut(s) 104
Ppu21I YACGTR 1 cut(s) 336
PpuMI RGGWCCY 1 cut(s) 1081
Psp5II RGGWCCY 1 cut(s) 1081
Psp6I CCWGG 1 cut(s) 151
PspFI CCCAGC 2 cut(s) 788, 1400
PspGI CCWGG 1 cut(s) 151
PspN4I GGNNCC 3 cut(s) 358, 550, 1083
PspPI GGNCC 3 cut(s) 791, 1081, 1457
PspPPI RGGWCCY 1 cut(s) 1081
PstNI CAGNNNCTG 1 cut(s) 1340
PvuI CGATCG 1 cut(s) 104
PvuII CAGCTG 1 cut(s) 826
RruI TCGCGA 1 cut(s) 120
RsaI GTAC 5 cut(s) 338, 431, 872, 1184, 1588
RsaNI GTAC 5 cut(s) 337, 430, 871, 1183, 1587
RseI CAYNNNNRTG 3 cut(s) 169, 1285, 1569
SaqAI TTAA 3 cut(s) 36, 573, 1007
SatI GCNGC 9 cut(s) 16, 72, 75, 149, 952, 1198, 1335, 1395, 1398
Sau3AI GATC 4 cut(s) 101, 121, 1065, 1258
Sau96I GGNCC 3 cut(s) 791, 1081, 1457
ScaI AGTACT 1 cut(s) 431
ScrFI CCNGG 1 cut(s) 153
SduI GDGCHC 3 cut(s) 522, 551, 625
SfaNI GCATC 4 cut(s) 172, 181, 372, 1564
SinI GGWCC 2 cut(s) 1081, 1457
SmiMI CAYNNNNRTG 3 cut(s) 169, 1285, 1569
SphI GCATGC 2 cut(s) 1151, 1528
Sse9I AATT 9 cut(s) 134, 217, 394, 564, 733, 795, 1111, 1385, 1487
SsiI CCGC 5 cut(s) 148, 951, 1197, 1394, 1406
SspI AATATT 2 cut(s) 249, 673
SspMI CTAG 1 cut(s) 1262
StyD4I CCNGG 1 cut(s) 151
TaaI ACNGT 2 cut(s) 875, 966
TaiI ACGT 2 cut(s) 257, 338
TaqI TCGA 3 cut(s) 100, 272, 421
TasI AATT 9 cut(s) 134, 217, 394, 564, 733, 795, 1111, 1385, 1487
TatI WGTACW 2 cut(s) 429, 1182
TauI GCSGC 4 cut(s) 151, 954, 1200, 1397
TfiI GAWTC 1 cut(s) 632
Tru1I TTAA 3 cut(s) 36, 573, 1007
Tru9I TTAA 3 cut(s) 36, 573, 1007
TscAI CASTG 3 cut(s) 396, 527, 1068
TseFI GTSAC 1 cut(s) 1059
TseI GCWGC 5 cut(s) 15, 71, 74, 1334, 1397
Tsp45I GTSAC 1 cut(s) 1059
TspDTI ATGAA 5 cut(s) 79, 275, 318, 504, 1269
TspGWI ACGGA 1 cut(s) 1559
TspRI CASTG 3 cut(s) 396, 527, 1068
Van91I CCANNNNNTGG 1 cut(s) 315
VpaK11BI GGWCC 2 cut(s) 1081, 1457
XapI RAATTY 4 cut(s) 217, 394, 564, 1385
XbaI TCTAGA 1 cut(s) 1261
XceI RCATGY 4 cut(s) 958, 1151, 1299, 1528
XmnI GAANNNNTTC 1 cut(s) 431
XspI CTAG 1 cut(s) 1262
ZrmI AGTACT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.