RchiOBHm_Chr2g0142601
HSP70 Family

Belongs to the heat shock protein 70 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
60186661 .. 60189589
2929 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ51274

Sequence Viewer

Length: 1287 bp
ATGGCGATTCTGCTTTTCTTTATCTTGGTCACAGGAGCTTCGTCTGGAATGGCATTCACCGGTGGAAACAATGCTGCAATGTTCATGAAGATGCCGGAAACAGCTGAGGGGCAGGCTGCTCAGGATGCAAGCACCATTGCTGAGCATATTGAAGAAAAGGATATACTGGTTTATAATCTTGGAGGGGGTGCATTAGATGTGAGTATCGTGCACATTGATAAAGGTCTTTTTGAAGTAATGGCGACAAGTGGAGACATTCACTTGGGAGGTAGGATCTTTGACGACAGACTGGTTGACTTTTTCATCACATTGATCAAGAGGAAGTACTACCATGATATCCGCAAAAATAACAAGGCTGTTGCCAAGCTTCGCAAGGATTGTGAGAGAGCAAAGGGAGCCTTGAGTAGACAGCACCAAACCCATGTGGAGGTTGAGTCTCTAGTTGATGGTATTGATTATTTCTCGGAGCCATTGACCAGGGCTAAGTTTGAGGAGTTGAACATGGAGTTGTTTAACAAGACCATCGGGACTGTGACAAATTGTTTAGAAGATGCAGGCCTGACAAAAACAGATATTGACGAGATTGTGCTTGTTGGAGGGAGTACTCGAATTCCTAAGGTGCAACAGTTGTTGAAGGACTTCTTCAATGGGAAAGAACCAAACAAGGGTGTTAATCCTGATGAGGCCATTGCCTTCGGTGCTGCAGTTCTGGGTGGAGCCTGTAGTGGAGACAGCTGGAATGAAACCAAAGGCCTTATTTTGCGTGATATTGTTCCTTTCACTCTCGGTATGGACATAGGTGACAGGGTGCATGAATGTATACCAAGGAACACTGTTATCCCAAATAAGATGTCAACGAAACTTTTCCTCAGAACCAAAGATAATACAGCCCCCGTTGTGGCCTATGAATGTGAAGGAAGACTATTGCCAAATGAATGTTCTGAGATTAAAAGAATTCCTGTAAGATTCGACAAAGCGACCCGAATTGAAGTGTTTTTTGATATCGATGCAAATGGGATTCTACATGTGACCATTGAAGAGGATGTCAAAGCAAGGGATAAAGTACTTGCCAGGCTCAGTCTTGAGGATGTGGCAGACGTGGCTAATACAATAAAAGGTATTATGTATCCTTCCAATCTGGACAAGCGGAGGAAGCTTCATAGCACAATAGAGAAGGCTCGCGCATTGTTGGAAACTAAATTTGATACGGTAGAGCAGGAAGATTTCGAAGAAATGGAGGAGAAGCTTAGAGAACTAGTAAAAATAGAGATCACACATTTTGCCTGA

Protein Analysis

428

Amino Acids

47.72

Weight (kDa)

5.33

Isoelectric Point (pI)

44.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HSP70 PF00012 48 - 419 1.6e-89 Hsp70 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 174
AccI GTMKAC 2 cut(s) 406, 820
AccII CGCG 1 cut(s) 1182
AciI CCGC 2 cut(s) 340, 1147
AclWI GGATC 1 cut(s) 281
AcsI RAATTY 3 cut(s) 609, 954, 1199
AfaI GTAC 3 cut(s) 326, 604, 1065
AfiI CCNNNNNNNGG 3 cut(s) 427, 665, 898
AflIII ACRYGT 1 cut(s) 1024
AgeI ACCGGT 1 cut(s) 59
AgsI TTSAA 7 cut(s) 152, 233, 499, 634, 646, 989, 1037
AhlI ACTAGT 1 cut(s) 1255
AjiI CACGTC 1 cut(s) 1099
AjnI CCWGG 2 cut(s) 476, 1070
AjuI GAANNNNNNNTTGG 2 cut(s) 922, 954
AluBI AGCT 6 cut(s) 38, 104, 367, 735, 1156, 1246
AluI AGCT 6 cut(s) 38, 104, 367, 735, 1156, 1246
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 3 cut(s) 246, 441, 723
Alw44I GTGCAC 1 cut(s) 209
AlwI GGATC 1 cut(s) 281
AoxI GGCC 4 cut(s) 556, 684, 751, 900
ApaLI GTGCAC 1 cut(s) 209
ApeKI GCWGC 3 cut(s) 74, 116, 701
ApoI RAATTY 3 cut(s) 609, 954, 1199
ArsI GACNNNNNNTTYG 2 cut(s) 836, 868
AsiGI ACCGGT 1 cut(s) 59
Asp700I GAANNNNTTC 2 cut(s) 638, 863
AspLEI GCGC 1 cut(s) 1184
AsuHPI GGTGA 2 cut(s) 49, 812
AsuII TTCGAA 1 cut(s) 1227
AxyI CCTNAGG 1 cut(s) 615
BaeGI GKGCMC 1 cut(s) 213
BbsI GAAGAC 1 cut(s) 925
Bbv12I GWGCWC 1 cut(s) 213
BbvCI CCTCAGC 1 cut(s) 105
BbvI GCAGC 3 cut(s) 61, 103, 688
BccI CCATC 2 cut(s) 440, 530
BciT130I CCWGG 2 cut(s) 478, 1072
BciVI GTATCC 1 cut(s) 1137
BclI TGATCA 1 cut(s) 312
BcoDI GTCTC 3 cut(s) 246, 441, 723
BcuI ACTAGT 1 cut(s) 1255
BfaI CTAG 2 cut(s) 440, 1256
BfmI CTRYAG 2 cut(s) 702, 721
BfuI GTATCC 1 cut(s) 1137
BisI GCNGC 3 cut(s) 75, 117, 702
BlpI GCTNAGC 1 cut(s) 141
BlsI GCNGC 3 cut(s) 76, 118, 703
BmcAI AGTACT 3 cut(s) 326, 604, 1065
Bme1390I CCNGG 2 cut(s) 478, 1072
BmgBI CACGTC 1 cut(s) 1099
BmiI GGNNCC 3 cut(s) 397, 468, 718
BmrFI CCNGG 2 cut(s) 478, 1072
BmsI GCATC 4 cut(s) 81, 115, 541, 997
BpiI GAAGAC 1 cut(s) 925
Bpu10I CCTNAGC 2 cut(s) 105, 120
Bpu1102I GCTNAGC 1 cut(s) 141
Bpu14I TTCGAA 1 cut(s) 1227
BpuEI CTTGAG 2 cut(s) 421, 1103
Bsa29I ATCGAT 1 cut(s) 1005
BsaJI CCNNGG 2 cut(s) 477, 824
BsaWI WCCGGW 1 cut(s) 59
BsaXI ACNNNNNCTCC 2 cut(s) 419, 449
Bsc4I CCNNNNNNNGG 3 cut(s) 427, 665, 898
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 2 cut(s) 171, 294
Bse21I CCTNAGG 1 cut(s) 615
Bse3DI GCAATG 3 cut(s) 84, 135, 687
BseBI CCWGG 2 cut(s) 478, 1072
BseCI ATCGAT 1 cut(s) 1005
BseDI CCNNGG 2 cut(s) 477, 824
BseGI GGATG 3 cut(s) 130, 1048, 1093
BseLI CCNNNNNNNGG 3 cut(s) 427, 665, 898
BseMI GCAATG 3 cut(s) 84, 135, 687
BseMII CTCAG 6 cut(s) 96, 132, 134, 883, 933, 1090
BseNI ACTGG 2 cut(s) 171, 294
BseRI GAGGAG 2 cut(s) 506, 1253
BseSI GKGCMC 1 cut(s) 213
BseXI GCAGC 3 cut(s) 61, 103, 688
Bsh1236I CGCG 1 cut(s) 1182
BshFI GGCC 4 cut(s) 558, 686, 753, 902
BshTI ACCGGT 1 cut(s) 59
BshVI ATCGAT 1 cut(s) 1005
BsiHKAI GWGCWC 1 cut(s) 213
BsiSI CCGG 2 cut(s) 60, 95
BslFI GGGAC 1 cut(s) 541
BslI CCNNNNNNNGG 3 cut(s) 427, 665, 898
BsmAI GTCTC 3 cut(s) 246, 441, 723
BsmFI GGGAC 1 cut(s) 541
BsmI GAATGC 1 cut(s) 53
BsnI GGCC 4 cut(s) 558, 686, 753, 902
Bsp119I TTCGAA 1 cut(s) 1227
Bsp1286I GDGCHC 1 cut(s) 213
Bsp143I GATC 3 cut(s) 273, 312, 1269
Bsp1720I GCTNAGC 1 cut(s) 141
BspACI CCGC 2 cut(s) 340, 1147
BspANI GGCC 4 cut(s) 558, 686, 753, 902
BspCNI CTCAG 6 cut(s) 97, 133, 133, 882, 934, 1089
BspDI ATCGAT 1 cut(s) 1005
BspFNI CGCG 1 cut(s) 1182
BspHI TCATGA 1 cut(s) 84
BspLI GGNNCC 3 cut(s) 397, 468, 718
BspMAI CTGCAG 1 cut(s) 706
BspPI GGATC 1 cut(s) 281
BspT104I TTCGAA 1 cut(s) 1227
BsrDI GCAATG 3 cut(s) 84, 135, 687
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 2 cut(s) 171, 294
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 2 cut(s) 477, 824
BssMI GATC 3 cut(s) 273, 312, 1269
BssNAI GTATAC 1 cut(s) 821
BssT1I CCWWGG 1 cut(s) 824
Bst1107I GTATAC 1 cut(s) 821
Bst2UI CCWGG 2 cut(s) 478, 1072
Bst4CI ACNGT 4 cut(s) 532, 627, 835, 1210
Bst6I CTCTTC 1 cut(s) 1032
BstBI TTCGAA 1 cut(s) 1227
BstC8I GCNNGC 4 cut(s) 114, 130, 556, 1180
BstDEI CTNAG 9 cut(s) 105, 120, 141, 483, 615, 869, 942, 1076, 1247
BstF5I GGATG 3 cut(s) 130, 1048, 1093
BstFNI CGCG 1 cut(s) 1182
BstHHI GCGC 1 cut(s) 1184
BstKTI GATC 3 cut(s) 276, 315, 1272
BstMAI GTCTC 3 cut(s) 246, 441, 723
BstMBI GATC 3 cut(s) 273, 312, 1269
BstMWI GCNNNNNNNGC 5 cut(s) 125, 395, 698, 1100, 1153
BstNI CCWGG 2 cut(s) 478, 1072
BstNSI RCATGY 1 cut(s) 1028
BstSCI CCNGG 2 cut(s) 476, 1070
BstSFI CTRYAG 2 cut(s) 702, 721
BstSLI GKGCMC 1 cut(s) 213
BstUI CGCG 1 cut(s) 1182
BstV1I GCAGC 3 cut(s) 61, 103, 688
BstV2I GAAGAC 1 cut(s) 925
BstX2I RGATCY 1 cut(s) 273
BstYI RGATCY 1 cut(s) 273
BstZ17I GTATAC 1 cut(s) 821
Bsu15I ATCGAT 1 cut(s) 1005
Bsu36I CCTNAGG 1 cut(s) 615
BsuI GTATCC 1 cut(s) 1137
BsuRI GGCC 4 cut(s) 558, 686, 753, 902
BsuTUI ATCGAT 1 cut(s) 1005
BtrI CACGTC 1 cut(s) 1099
BtsCI GGATG 3 cut(s) 130, 1048, 1093
BtsIMutI CAGTG 1 cut(s) 831
Cac8I GCNNGC 4 cut(s) 114, 130, 556, 1180
CciI TCATGA 1 cut(s) 84
CfoI GCGC 1 cut(s) 1184
Cfr10I RCCGGY 1 cut(s) 59
ClaI ATCGAT 1 cut(s) 1005
Csp6I GTAC 3 cut(s) 325, 603, 1064
CspAI ACCGGT 1 cut(s) 59
CviAII CATG 6 cut(s) 85, 332, 422, 502, 812, 1025
CviQI GTAC 3 cut(s) 325, 603, 1064
DdeI CTNAG 9 cut(s) 105, 120, 141, 483, 615, 869, 942, 1076, 1247
DpnI GATC 3 cut(s) 275, 314, 1271
DpnII GATC 3 cut(s) 273, 312, 1269
Eam1104I CTCTTC 1 cut(s) 1032
EarI CTCTTC 1 cut(s) 1032
Eco130I CCWWGG 1 cut(s) 824
Eco147I AGGCCT 2 cut(s) 558, 753
Eco32I GATATC 2 cut(s) 337, 1003
Eco81I CCTNAGG 1 cut(s) 615
EcoRI GAATTC 2 cut(s) 609, 954
EcoRII CCWGG 2 cut(s) 476, 1070
EcoRV GATATC 2 cut(s) 337, 1003
EcoT14I CCWWGG 1 cut(s) 824
ErhI CCWWGG 1 cut(s) 824
FaeI CATG 6 cut(s) 88, 335, 425, 505, 815, 1028
FalI AAGNNNNNCTT 4 cut(s) 383, 415, 626, 658
FaqI GGGAC 1 cut(s) 541
FatI CATG 6 cut(s) 84, 331, 421, 501, 811, 1024
FbaI TGATCA 1 cut(s) 312
FblI GTMKAC 2 cut(s) 406, 820
Fnu4HI GCNGC 3 cut(s) 75, 117, 702
FokI GGATG 3 cut(s) 137, 1055, 1100
Fsp4HI GCNGC 3 cut(s) 75, 117, 702
FspBI CTAG 2 cut(s) 440, 1256
GlaI GCGC 1 cut(s) 1183
GluI GCNGC 3 cut(s) 75, 117, 702
HaeIII GGCC 4 cut(s) 558, 686, 753, 902
HapII CCGG 2 cut(s) 60, 95
HhaI GCGC 1 cut(s) 1184
Hin1II CATG 6 cut(s) 88, 335, 425, 505, 815, 1028
Hin6I GCGC 1 cut(s) 1182
HinP1I GCGC 1 cut(s) 1182
HincII GTYRAC 2 cut(s) 295, 855
HindII GTYRAC 2 cut(s) 295, 855
HindIII AAGCTT 3 cut(s) 365, 1154, 1244
HinfI GANTC 4 cut(s) 7, 434, 966, 1018
HpaII CCGG 2 cut(s) 60, 95
HphI GGTGA 2 cut(s) 49, 812
Hpy166II GTNNAC 5 cut(s) 211, 295, 407, 821, 855
Hpy188I TCNGA 3 cut(s) 466, 872, 943
Hpy188III TCNNGA 8 cut(s) 45, 85, 122, 316, 526, 677, 1082, 1139
Hpy8I GTNNAC 5 cut(s) 211, 295, 407, 821, 855
HpyAV CCTTC 5 cut(s) 628, 703, 908, 1140, 1168
HpyCH4III ACNGT 4 cut(s) 532, 627, 835, 1210
HpyCH4IV ACGT 1 cut(s) 1098
HpyCH4V TGCA 9 cut(s) 77, 128, 191, 211, 554, 622, 704, 811, 1010
HpyF10VI GCNNNNNNNGC 5 cut(s) 125, 395, 698, 1100, 1153
HpyF3I CTNAG 9 cut(s) 105, 120, 141, 483, 615, 869, 942, 1076, 1247
HpySE526I ACGT 1 cut(s) 1098
Hsp92II CATG 6 cut(s) 88, 335, 425, 505, 815, 1028
HspAI GCGC 1 cut(s) 1182
Ksp22I TGATCA 1 cut(s) 312
Kzo9I GATC 3 cut(s) 273, 312, 1269
LmnI GCTCC 4 cut(s) 35, 395, 466, 716
Lsp1109I GCAGC 3 cut(s) 61, 103, 688
LweI GCATC 4 cut(s) 81, 115, 541, 997
MaeI CTAG 2 cut(s) 440, 1256
MaeII ACGT 1 cut(s) 1098
MaeIII GTNAC 4 cut(s) 28, 532, 800, 1027
MalI GATC 3 cut(s) 275, 314, 1271
MboI GATC 3 cut(s) 273, 312, 1269
MboII GAAGA 8 cut(s) 100, 164, 560, 634, 930, 1049, 1232, 1241
MflI RGATCY 1 cut(s) 273
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 5 cut(s) 538, 609, 954, 984, 1199
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 2 cut(s) 574, 1170
MroXI GAANNNNTTC 2 cut(s) 638, 863
MseI TTAA 3 cut(s) 513, 672, 948
MslI CAYNNNNRTG 1 cut(s) 89
MspA1I CMGCKG 2 cut(s) 104, 735
MspI CCGG 2 cut(s) 60, 95
MspR9I CCNGG 2 cut(s) 478, 1072
Mva1269I GAATGC 1 cut(s) 53
MvaI CCWGG 2 cut(s) 478, 1072
MvnI CGCG 1 cut(s) 1182
MwoI GCNNNNNNNGC 5 cut(s) 125, 395, 698, 1100, 1153
NdeII GATC 3 cut(s) 273, 312, 1269
NlaIII CATG 6 cut(s) 88, 335, 425, 505, 815, 1028
NlaIV GGNNCC 3 cut(s) 397, 468, 718
NmuCI GTSAC 4 cut(s) 28, 532, 800, 1027
NspI RCATGY 1 cut(s) 1028
NspV TTCGAA 1 cut(s) 1227
PagI TCATGA 1 cut(s) 84
PceI AGGCCT 2 cut(s) 558, 753
PciI ACATGT 1 cut(s) 1024
PctI GAATGC 1 cut(s) 53
PdmI GAANNNNTTC 2 cut(s) 638, 863
PfeI GAWTC 3 cut(s) 7, 966, 1018
PinAI ACCGGT 1 cut(s) 59
PkrI GCNGC 3 cut(s) 76, 118, 703
PleI GAGTC 1 cut(s) 442
PpsI GAGTC 1 cut(s) 442
PscI ACATGT 1 cut(s) 1024
PsiI TTATAA 1 cut(s) 174
Psp6I CCWGG 2 cut(s) 476, 1070
PspGI CCWGG 2 cut(s) 476, 1070
PspN4I GGNNCC 3 cut(s) 397, 468, 718
PstI CTGCAG 1 cut(s) 706
PsuI RGATCY 1 cut(s) 273
PvuII CAGCTG 2 cut(s) 104, 735
RsaI GTAC 3 cut(s) 326, 604, 1065
RsaNI GTAC 3 cut(s) 325, 603, 1064
RseI CAYNNNNRTG 1 cut(s) 89
SaqAI TTAA 3 cut(s) 513, 672, 948
SatI GCNGC 3 cut(s) 75, 117, 702
Sau3AI GATC 3 cut(s) 273, 312, 1269
ScaI AGTACT 3 cut(s) 326, 604, 1065
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 2 cut(s) 478, 1072
SduI GDGCHC 1 cut(s) 213
SfaNI GCATC 4 cut(s) 81, 115, 541, 997
SfcI CTRYAG 2 cut(s) 702, 721
SfuI TTCGAA 1 cut(s) 1227
SgrAI CRCCGGYG 1 cut(s) 59
SmiMI CAYNNNNRTG 1 cut(s) 89
SmlI CTYRAG 2 cut(s) 400, 1082
SmoI CTYRAG 2 cut(s) 400, 1082
SpeI ACTAGT 1 cut(s) 1255
Sse9I AATT 5 cut(s) 538, 609, 954, 984, 1199
SseBI AGGCCT 2 cut(s) 558, 753
SsiI CCGC 2 cut(s) 340, 1147
SspMI CTAG 2 cut(s) 440, 1256
StuI AGGCCT 2 cut(s) 558, 753
StyD4I CCNGG 2 cut(s) 476, 1070
StyI CCWWGG 1 cut(s) 824
TaaI ACNGT 4 cut(s) 532, 627, 835, 1210
TaiI ACGT 1 cut(s) 1101
TaqI TCGA 4 cut(s) 607, 969, 1005, 1227
TasI AATT 5 cut(s) 538, 609, 954, 984, 1199
TatI WGTACW 3 cut(s) 324, 602, 1063
TfiI GAWTC 3 cut(s) 7, 966, 1018
Tru1I TTAA 3 cut(s) 513, 672, 948
Tru9I TTAA 3 cut(s) 513, 672, 948
TscAI CASTG 1 cut(s) 838
TseFI GTSAC 4 cut(s) 28, 532, 800, 1027
TseI GCWGC 3 cut(s) 74, 116, 701
Tsp45I GTSAC 4 cut(s) 28, 532, 800, 1027
TspDTI ATGAA 8 cut(s) 73, 101, 292, 756, 828, 921, 948, 1148
TspRI CASTG 1 cut(s) 838
VneI GTGCAC 1 cut(s) 209
XapI RAATTY 3 cut(s) 609, 954, 1199
XceI RCATGY 1 cut(s) 1028
XmiI GTMKAC 2 cut(s) 406, 820
XmnI GAANNNNTTC 2 cut(s) 638, 863
XspI CTAG 2 cut(s) 440, 1256
ZrmI AGTACT 3 cut(s) 326, 604, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.