Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0004277

Physical Location & Seq

Genomic Coordinates Forward (+)

655294 .. 658492

Gene Structure 3199 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0008700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGACTCCACCAAACTATTATCCCTCTTAAGAACATGCATCACTTCGAAGTCGCTGAGACCAGGCAAGCTCGTCCACCAAAAGATACTCACTCAAGGCTTCCAATACAACACCCTCTTGTGCAAAAACCTCATAGACTTCTACATCTCTTGCCATTTATGCCCTTCTGCAAAGCTTGTTTTCCAATCCATTGAAAACCCATCCAACATTTCCTTGTGGAATTCTCTCACGACGGCTTACACCAAGAACCTCATGTTCATTGACGCTCTTGAGCTCTATGAAAGGTTACTGTGTTACCCCTATATGGGTCCTGATAGTTACACCTACCCAAGTGTTCTCAAGGCCTGCGGTGCATTGGGTAGGGTAGGTCTTGGAAAGATGATCCATAACCATTTGATAAAGACTGGTTTCATATCAGATATCGTCGTGGCAAGTTCCCTTGTGGGAATGTATGCGAAATGCAATGTGTTTGGTCCTGCAATTCAGCTGTTTGATGAAATGCCTGAAAGAGATGTGGCATGTTGGAATACTGCAATTTCTTGTTATTATCAAAATGGGCAAGCTCAGAAGGCAATGGACTTGTATGAGAAGATGAGGAGTTCTGGCTTTGAGCCTAATGTAGTAACGATCACTACTGTTATTTCATCATGTGCAAGACTTTTGGATTTGGAGAGAGGTAGGGAGATTCACAAGGAGTTGATACAAAATCGATTCGTTTTGGATTCCTTTGTTAGTTCTGCTTTGGTAGACATGTATGGGAAATGTGGATGTATAGATATGGCAAAAGAGATTTTTGAACAAGTCCCAAGAAAGAATGTCATCGCTTGGAATTCCATGATTGCAGCCTATAGTGTAACAGGTGACAGTAAATCTTGTATCGATCTTTTTAGAAGGATGACTGATGAAGGAACTAGTCCCTCTTTGATTACTTTTAGCAGCATTTTGTTGGCTAGTTCAAGATCGGTCCAATTTCAACATGGAAAATTCGTGCACGGATATATGATAAGAAACTATGTAGAGGCTGATATCTATGTTTACAGTTCGCTTATTGATCTCTACTTTGTGTGTGGAAGTATCTCGTCTGCTAAAAATGTCTTTGAAAAGATGTCCAAGACAAATGTAGTTTCTTGGAATGTTATGATTTCTGGATACGTGAAAGTGGGAAATTATTTCAGGGCTCTAGGGTTATATGATGAGATGAAAGAAGCTGGTGTAAGGCCAAACGCCATCACGGTAACTAGTATCCTATCGGCTTGTTCACAACTAACAGCACTGGAAAAGGGTAAGGAGATTCACAGAACTGTTGTTGATAGTGAGTTGGAAACCAATGAAATAGTCATGGGGGCTCTCCTTGACATGTATGCTAAATGTGGTGCGGTGGATGAAGCACGTAATGTTTTCAATAGATTACCAGGTAGAGATCTTGTGTCATGGACATCCATGATCACGGCTTATGGGTCTCATGGTCAGACTAAAGAAGCTTTAAAGCTTTTTGATGAAATGCAACAATCCAATGAAAAACCAGATGGAGTTACTCTTCTTGCAGTGCTATCTGCTTGTAGCCATGTTGGATTAGTTGATGAAGGTTGTTGCTATTTCAATAAAATGATCGGTGAATATGGGATTGAACCGAGAATAGAACATTACTCTTGCTTAATAGATCTTCTTGGCCGTGCTGGTAGGTTGAATGAAGCTTACCAAATCATCCAAAGAACTCCACAAATTAGGGAGGATGTTGACTTGTTAAGTACACTATTTTCTGCATGTCGTTTGCACGGAGATCAAGACTTGGGTGTAAAAATTGCAAGATTGCTAATTGAGAAGAATCCTGATGATCCTTCAACATATATTATGTTATCACATAGTCTTGCTTCTGGAAACAAATGGAATGAGGTGCGGAAGGTGAGACTAAAGATGAAAGAATTGGGATTAAGGAAAAATCCTGGGTGTAGCTGGATTGAGATTAACGAGAGGATTCAGCCTTTCTTTGTTCAAGACCAGTCCCACCCAGAATCCGAAATGGTATATCAGTGTCTCAAACTTCTCAAGAGTCACATGGAGGGAGATGAGTTATTTCCACACTGGGGATCAGCAATATTTCATACTATATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005788 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016043 GO:0016049 GO:0016592 GO:0022414 GO:0030154 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0070013 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04918 ko05020 map03060 map04141 map04918 map05020

Pfam Domains

Protein Families

HSP70

Protein Analysis

703

Amino Acids

79.03

Weight (kDa)

6.64

Isoelectric Point (pI)

40.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	170 - 219	4e-14	PPR repeat family
PPR	PF01535	174 - 203	5.8e-07	PPR repeat
PPR_long	PF17177	214 - 392	1e-05	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	271 - 315	1.7e-08	PPR repeat family
PPR_3	PF13812	271 - 315	4.6e-06	Pentatricopeptide repeat domain
PPR_3	PF13812	371 - 419	1.3e-07	Pentatricopeptide repeat domain
PPR_2	PF13041	373 - 420	3.2e-14	PPR repeat family
PPR	PF01535	375 - 405	3.6e-09	PPR repeat
PPR_2	PF13041	474 - 521	3.5e-11	PPR repeat family
PPR	PF01535	476 - 505	2.8e-09	PPR repeat
E_motif	PF20431	592 - 654	2.7e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09080 AT1G09080
fragaria_vesca	FvH4_6g06470
malus_domestica	MD12G1215200.v1.1
prunus_persica	Prupe.6G321700_v2.0.a1
pyrus_communis	pycom04g17760 pycom12g20120
rosa_chinensis	RchiOBHm_Chr2g0142601 RchiOBHm_Chr3g0455591 RchiOBHm_Chr3g0455611 RchiOBHm_Chr3g0455631
rosa_laevigata	RLG00000019973 RLG00000019974 RLG00000025345 RLG00000025351
rosa_multiflora	Rmu_co8491437.1_g000001 Rmu_sc0000223.1_g000003 Rmu_sc0005164.1_g000002 Rmu_sc0015502.1_g000002
rosa_roxburghii	Rroxscaffold_2G00102460
rosa_rugosa	Rorug03G0008500 Rorug03G0008700
rosa_samantha	Rh2AG426400 Rh2BG436000 Rh2CG412900 Rh2DG445800 Rh3AG067800 Rh3AG068000 Rh3DG070300
rosa_wichuraiana	Rw2G034940 Rw3G005440 Rw3G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	747
AciI	CCGC	3 cut(s)	348, 1376, 1897
AclWI	GGATC	3 cut(s)	376, 1829, 2095
AcoI	YGGCCR	1 cut(s)	1669
AcsI	RAATTY	3 cut(s)	220, 829, 983
AfaI	GTAC	1 cut(s)	1750
AfiI	CCNNNNNNNGG	3 cut(s)	304, 305, 2084
AflII	CTTAAG	1 cut(s)	28
AflIII	ACRYGT	2 cut(s)	750, 1356
AhlI	ACTAGT	2 cut(s)	911, 1238
AjnI	CCWGG	3 cut(s)	61, 1411, 1942
Alw21I	GWGCWC	2 cut(s)	276, 993
Alw26I	GTCTC	4 cut(s)	52, 1464, 1900, 2039
Alw44I	GTGCAC	1 cut(s)	989
AlwI	GGATC	3 cut(s)	376, 1829, 2095
AoxI	GGCC	3 cut(s)	342, 1217, 1669
ApaLI	GTGCAC	1 cut(s)	989
ApeKI	GCWGC	2 cut(s)	842, 936
ApoI	RAATTY	3 cut(s)	220, 829, 983
AspS9I	GGNCC	3 cut(s)	308, 473, 964
AsuHPI	GGTGA	3 cut(s)	872, 1625, 1915
AsuII	TTCGAA	1 cut(s)	47
AvaII	GGWCC	3 cut(s)	308, 473, 964
BaeGI	GKGCMC	1 cut(s)	993
BanII	GRGCYC	3 cut(s)	276, 1180, 1348
Bbv12I	GWGCWC	2 cut(s)	276, 993
BbvI	GCAGC	2 cut(s)	854, 948
BccI	CCATC	3 cut(s)	208, 1235, 1520
BceAI	ACGGC	3 cut(s)	249, 1464, 1656
BciT130I	CCWGG	3 cut(s)	63, 1413, 1944
BciVI	GTATCC	2 cut(s)	1142, 1253
BclI	TGATCA	1 cut(s)	1443
BcoDI	GTCTC	4 cut(s)	52, 1464, 1900, 2039
BcuI	ACTAGT	2 cut(s)	911, 1238
BfaI	CTAG	4 cut(s)	912, 951, 1181, 1239
BfmI	CTRYAG	1 cut(s)	847
BfrI	CTTAAG	1 cut(s)	28
BfuI	GTATCC	2 cut(s)	1142, 1253
BglII	AGATCT	2 cut(s)	1420, 1660
BisI	GCNGC	2 cut(s)	843, 937
BlsI	GCNGC	2 cut(s)	844, 938
Bme1390I	CCNGG	3 cut(s)	63, 1413, 1944
Bme18I	GGWCC	3 cut(s)	308, 473, 964
BmgT120I	GGNCC	3 cut(s)	308, 473, 964
BmiI	GGNNCC	1 cut(s)	309
BmrFI	CCNGG	3 cut(s)	63, 1413, 1944
BmrI	ACTGGG	1 cut(s)	2092
BmsI	GCATC	1 cut(s)	48
BmuI	ACTGGG	1 cut(s)	2092
Bpu14I	TTCGAA	1 cut(s)	47
BpuEI	CTTGAG	4 cut(s)	78, 290, 323, 2030
Bsa29I	ATCGAT	2 cut(s)	709, 879
BsaAI	YACGTR	2 cut(s)	1153, 1391
BsaI	GGTCTC	2 cut(s)	52, 1464
BsaJI	CCNNGG	1 cut(s)	1943
Bsc4I	CCNNNNNNNGG	3 cut(s)	304, 305, 2084
Bse1I	ACTGG	4 cut(s)	409, 1278, 1999, 2087
Bse3DI	GCAATG	2 cut(s)	469, 579
BseBI	CCWGG	3 cut(s)	63, 1413, 1944
BseCI	ATCGAT	2 cut(s)	709, 879
BseDI	CCNNGG	1 cut(s)	1943
BseGI	GGATG	7 cut(s)	200, 773, 900, 1387, 1436, 1704, 1738
BseLI	CCNNNNNNNGG	3 cut(s)	304, 305, 2084
BseMI	GCAATG	2 cut(s)	469, 579
BseMII	CTCAG	2 cut(s)	47, 578
BseNI	ACTGG	4 cut(s)	409, 1278, 1999, 2087
BseRI	GAGGAG	1 cut(s)	610
BseSI	GKGCMC	1 cut(s)	993
BseXI	GCAGC	2 cut(s)	854, 948
BshFI	GGCC	3 cut(s)	344, 1219, 1671
BshVI	ATCGAT	2 cut(s)	709, 879
BsiHKAI	GWGCWC	2 cut(s)	276, 993
BslFI	GGGAC	3 cut(s)	788, 900, 1987
BslI	CCNNNNNNNGG	3 cut(s)	304, 305, 2084
BsmAI	GTCTC	4 cut(s)	52, 1464, 1900, 2039
BsmFI	GGGAC	3 cut(s)	788, 900, 1987
BsnI	GGCC	3 cut(s)	344, 1219, 1671
Bso31I	GGTCTC	2 cut(s)	52, 1464
Bsp119I	TTCGAA	1 cut(s)	47
Bsp1286I	GDGCHC	4 cut(s)	276, 993, 1180, 1348
BspACI	CCGC	3 cut(s)	348, 1376, 1897
BspANI	GGCC	3 cut(s)	344, 1219, 1671
BspCNI	CTCAG	2 cut(s)	48, 577
BspDI	ATCGAT	2 cut(s)	709, 879
BspLI	GGNNCC	1 cut(s)	309
BspPI	GGATC	3 cut(s)	376, 1829, 2095
BspT104I	TTCGAA	1 cut(s)	47
BspTI	CTTAAG	1 cut(s)	28
BspTNI	GGTCTC	2 cut(s)	52, 1464
BsrDI	GCAATG	2 cut(s)	469, 579
BsrI	ACTGG	4 cut(s)	409, 1278, 1999, 2087
BssECI	CCNNGG	1 cut(s)	1943
Bst2UI	CCWGG	3 cut(s)	63, 1413, 1944
Bst4CI	ACNGT	6 cut(s)	291, 637, 866, 1040, 1234, 1303
Bst6I	CTCTTC	1 cut(s)	1542
BstAFI	CTTAAG	1 cut(s)	28
BstBAI	YACGTR	2 cut(s)	1153, 1391
BstBI	TTCGAA	1 cut(s)	47
BstC8I	GCNNGC	3 cut(s)	68, 346, 561
BstDEI	CTNAG	2 cut(s)	56, 564
BstF5I	GGATG	7 cut(s)	200, 773, 900, 1387, 1436, 1704, 1738
BstMAI	GTCTC	4 cut(s)	52, 1464, 1900, 2039
BstMWI	GCNNNNNNNGC	3 cut(s)	159, 350, 569
BstNI	CCWGG	3 cut(s)	63, 1413, 1944
BstNSI	RCATGY	5 cut(s)	39, 522, 754, 1360, 1767
BstSCI	CCNGG	3 cut(s)	61, 1411, 1942
BstSFI	CTRYAG	1 cut(s)	847
BstSLI	GKGCMC	1 cut(s)	993
BstV1I	GCAGC	2 cut(s)	854, 948
BstX2I	RGATCY	2 cut(s)	1420, 1660
BstYI	RGATCY	2 cut(s)	1420, 1660
Bsu15I	ATCGAT	2 cut(s)	709, 879
BsuI	GTATCC	2 cut(s)	1142, 1253
BsuRI	GGCC	3 cut(s)	344, 1219, 1671
BsuTUI	ATCGAT	2 cut(s)	709, 879
BtgZI	GCGATG	1 cut(s)	805
BtsCI	GGATG	7 cut(s)	200, 773, 900, 1387, 1436, 1704, 1738
BtsI	GCAGTG	1 cut(s)	1551
BtsIMutI	CAGTG	4 cut(s)	1271, 1551, 2036, 2080
Cac8I	GCNNGC	3 cut(s)	68, 346, 561
Cfr13I	GGNCC	3 cut(s)	308, 473, 964
ClaI	ATCGAT	2 cut(s)	709, 879
CseI	GACGC	1 cut(s)	272
CsiI	ACCWGGT	1 cut(s)	1411
Csp6I	GTAC	1 cut(s)	1749
CviQI	GTAC	1 cut(s)	1749
DdeI	CTNAG	2 cut(s)	56, 564
DraI	TTTAAA	1 cut(s)	1485
EaeI	YGGCCR	1 cut(s)	1669
Eam1104I	CTCTTC	1 cut(s)	1542
EarI	CTCTTC	1 cut(s)	1542
Ecl136II	GAGCTC	1 cut(s)	274
Eco147I	AGGCCT	1 cut(s)	344
Eco24I	GRGCYC	3 cut(s)	276, 1180, 1348
Eco31I	GGTCTC	2 cut(s)	52, 1464
Eco32I	GATATC	2 cut(s)	421, 1027
Eco47I	GGWCC	3 cut(s)	308, 473, 964
Eco53kI	GAGCTC	1 cut(s)	274
EcoICRI	GAGCTC	1 cut(s)	274
EcoO109I	RGGNCCY	1 cut(s)	308
EcoRI	GAATTC	2 cut(s)	220, 829
EcoRII	CCWGG	3 cut(s)	61, 1411, 1942
EcoRV	GATATC	2 cut(s)	421, 1027
EcoT22I	ATGCAT	1 cut(s)	41
EcoT38I	GRGCYC	3 cut(s)	276, 1180, 1348
FaqI	GGGAC	3 cut(s)	788, 900, 1987
FbaI	TGATCA	1 cut(s)	1443
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	2 cut(s)	843, 937
FokI	GGATG	7 cut(s)	187, 780, 907, 1394, 1423, 1691, 1745
FriOI	GRGCYC	3 cut(s)	276, 1180, 1348
Fsp4HI	GCNGC	2 cut(s)	843, 937
FspBI	CTAG	4 cut(s)	912, 951, 1181, 1239
GluI	GCNGC	2 cut(s)	843, 937
HaeIII	GGCC	3 cut(s)	344, 1219, 1671
HgaI	GACGC	1 cut(s)	272
HincII	GTYRAC	1 cut(s)	1738
HindII	GTYRAC	1 cut(s)	1738
HindIII	AAGCTT	4 cut(s)	173, 1479, 1487, 1692
HinfI	GANTC	9 cut(s)	5, 685, 711, 722, 1291, 1825, 1975, 2012, 2050
HphI	GGTGA	3 cut(s)	872, 1625, 1915
Hpy166II	GTNNAC	7 cut(s)	76, 748, 991, 1036, 1259, 1738, 1751
Hpy188I	TCNGA	4 cut(s)	418, 567, 1470, 2017
Hpy8I	GTNNAC	7 cut(s)	76, 748, 991, 1036, 1259, 1738, 1751
Hpy99I	CGWCG	2 cut(s)	235, 428
HpyAV	CCTTC	7 cut(s)	174, 562, 885, 899, 1577, 1848, 1894
HpyCH4III	ACNGT	6 cut(s)	291, 637, 866, 1040, 1234, 1303
HpyCH4IV	ACGT	2 cut(s)	1152, 1390
HpyF10VI	GCNNNNNNNGC	3 cut(s)	159, 350, 569
HpyF3I	CTNAG	2 cut(s)	56, 564
HpySE526I	ACGT	2 cut(s)	1152, 1390
Ksp22I	TGATCA	1 cut(s)	1443
Lsp1109I	GCAGC	2 cut(s)	854, 948
LweI	GCATC	1 cut(s)	48
MabI	ACCWGGT	1 cut(s)	1411
MaeI	CTAG	4 cut(s)	912, 951, 1181, 1239
MaeII	ACGT	2 cut(s)	1152, 1390
MaeIII	GTNAC	9 cut(s)	285, 293, 317, 622, 853, 860, 1234, 1531, 2051
MboII	GAAGA	4 cut(s)	601, 1529, 1655, 1834
MflI	RGATCY	2 cut(s)	1420, 1660
MhlI	GDGCHC	4 cut(s)	276, 993, 1180, 1348
MlyI	GAGTC	1 cut(s)	2059
MmeI	TCCRAC	4 cut(s)	228, 503, 1299, 1549
Mph1103I	ATGCAT	1 cut(s)	41
MseI	TTAA	6 cut(s)	29, 1484, 1655, 1745, 1931, 1965
MspA1I	CMGCKG	1 cut(s)	487
MspCI	CTTAAG	1 cut(s)	28
MspR9I	CCNGG	3 cut(s)	63, 1413, 1944
MvaI	CCWGG	3 cut(s)	63, 1413, 1944
MwoI	GCNNNNNNNGC	3 cut(s)	159, 350, 569
NlaIV	GGNNCC	1 cut(s)	309
NmuCI	GTSAC	2 cut(s)	860, 2051
NsiI	ATGCAT	1 cut(s)	41
NspI	RCATGY	5 cut(s)	39, 522, 754, 1360, 1767
NspV	TTCGAA	1 cut(s)	47
PceI	AGGCCT	1 cut(s)	344
PciI	ACATGT	2 cut(s)	750, 1356
PfeI	GAWTC	7 cut(s)	685, 711, 722, 1291, 1825, 1975, 2012
PkrI	GCNGC	2 cut(s)	844, 938
PleI	GAGTC	1 cut(s)	2058
PpsI	GAGTC	1 cut(s)	2058
Ppu21I	YACGTR	2 cut(s)	1153, 1391
PpuMI	RGGWCCY	1 cut(s)	308
PscI	ACATGT	2 cut(s)	750, 1356
Psp124BI	GAGCTC	1 cut(s)	276
Psp5II	RGGWCCY	1 cut(s)	308
Psp6I	CCWGG	3 cut(s)	61, 1411, 1942
PspGI	CCWGG	3 cut(s)	61, 1411, 1942
PspN4I	GGNNCC	1 cut(s)	309
PspPI	GGNCC	3 cut(s)	308, 473, 964
PspPPI	RGGWCCY	1 cut(s)	308
PsuI	RGATCY	2 cut(s)	1420, 1660
PvuII	CAGCTG	1 cut(s)	487
RsaI	GTAC	1 cut(s)	1750
RsaNI	GTAC	1 cut(s)	1749
SacI	GAGCTC	1 cut(s)	276
SaqAI	TTAA	6 cut(s)	29, 1484, 1655, 1745, 1931, 1965
SatI	GCNGC	2 cut(s)	843, 937
Sau96I	GGNCC	3 cut(s)	308, 473, 964
SchI	GAGTC	1 cut(s)	2059
ScrFI	CCNGG	3 cut(s)	63, 1413, 1944
SduI	GDGCHC	4 cut(s)	276, 993, 1180, 1348
SexAI	ACCWGGT	1 cut(s)	1411
SfaNI	GCATC	1 cut(s)	48
SfcI	CTRYAG	1 cut(s)	847
SfuI	TTCGAA	1 cut(s)	47
SinI	GGWCC	3 cut(s)	308, 473, 964
SmlI	CTYRAG	5 cut(s)	28, 93, 269, 338, 2045
SmoI	CTYRAG	5 cut(s)	28, 93, 269, 338, 2045
SpeI	ACTAGT	2 cut(s)	911, 1238
SseBI	AGGCCT	1 cut(s)	344
SsiI	CCGC	3 cut(s)	348, 1376, 1897
SspI	AATATT	1 cut(s)	2097
SspMI	CTAG	4 cut(s)	912, 951, 1181, 1239
SstI	GAGCTC	1 cut(s)	276
StuI	AGGCCT	1 cut(s)	344
StyD4I	CCNGG	3 cut(s)	61, 1411, 1942
TaaI	ACNGT	6 cut(s)	291, 637, 866, 1040, 1234, 1303
TaiI	ACGT	2 cut(s)	1155, 1393
TaqI	TCGA	3 cut(s)	47, 709, 879
TaqII	GACCGA	1 cut(s)	952
TatI	WGTACW	1 cut(s)	1748
TfiI	GAWTC	7 cut(s)	685, 711, 722, 1291, 1825, 1975, 2012
Tru1I	TTAA	6 cut(s)	29, 1484, 1655, 1745, 1931, 1965
Tru9I	TTAA	6 cut(s)	29, 1484, 1655, 1745, 1931, 1965
TscAI	CASTG	4 cut(s)	1278, 1551, 2036, 2087
TseFI	GTSAC	2 cut(s)	860, 2051
TseI	GCWGC	2 cut(s)	842, 936
Tsp45I	GTSAC	2 cut(s)	860, 2051
TspGWI	ACGGA	2 cut(s)	1008, 1791
TspRI	CASTG	4 cut(s)	1278, 1551, 2036, 2087
Vha464I	CTTAAG	1 cut(s)	28
VneI	GTGCAC	1 cut(s)	989
VpaK11BI	GGWCC	3 cut(s)	308, 473, 964
XapI	RAATTY	3 cut(s)	220, 829, 983
XceI	RCATGY	5 cut(s)	39, 522, 754, 1360, 1767
XcmI	CCANNNNNNNNNTGG	1 cut(s)	974
XmiI	GTMKAC	1 cut(s)	747
XspI	CTAG	4 cut(s)	912, 951, 1181, 1239
Zsp2I	ATGCAT	1 cut(s)	41

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.