Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0004277

Physical Location & Seq

Genomic Coordinates Forward (+)

45220729 .. 45223427

Gene Structure 2699 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025351

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2070 bp

ATGAAGAACACCAGAGCATTGTCGTTGACGTTTTTGCTTCTCTTTCTTTCAGGTATGAAATATGTTACAAGCTTTGTTTGTTCGACATGTCATTTTCAAGTAGAGTTTTTGCTGATAAATTTGTTGTTGTTGCTAGAATTCTTGTGTGGAATAGCATTGGCGGCAGAAAGTTCATCGAAGCCGGGGACCGTGATCGGAATCGATCTCGGAACCACGTATTCTTGTGTGGGGGTGTACAGGAATGGAAATGTAGAGATCATAGTAAACGACCAGGGCAATAGGATCACACCCTCTTGGGTTGCATTCACGGACACCGAGCGGTTGATCGGAGAGGCGGCAAAGAATCAAGCCCCTCAGAACTCGGAACGTACAATTTTCGATGTCAAGCGGCTCATAGGGAGAAGGTTTAATGATCCAGAGGTTCAGAGAGACATTAAGTTTTTGCCTTATAAGGTTGTGAATAGGGACGGGAAGCCTTATATTCAGGTCAAGGTTAAAGGTGAGGACAAGGTGTTTAGCCCTGAGGAAATCAGTGCTATGATACTGAGTAAGATGAAGGAAACAGCTGAGGCTTATTTGGGGAAGAAGATCACAAGGGCTGTCGTAACAGTTCCAGCTTATTTCAATGATGCCCAGAGGCAGGCTACCAAGGATGCAGGCATCATTGCCGGGCTCATAGTTGAGCGAATAATCAACGAGCCCACGGCCGCAGCCATCGCGTATGGTCTAGACAAAAAGGGGGAGAAGAACATACTGGTTTATGATCTTGGTGGTGGTACATTTGATGTTAGCATCTTGAGTATTGATAATGGTGTATTCGAGGTGAGGTCTACGAGTGGAGACACTCATTTGGGAGGAGAGGATTTTGACCACAGAGTGATGGACTATTTCATCAAGTTGATCAAGAAGAAGTACAACAAAGACATTAGCAAGGACAACAAGGCTATAGGGAAGCTTCGCAAGGAATGTGAGAGGGCTAAGAGGGCCTTGAGTAGCCAGCACCAGGTTCGAGTGGAGATTGAGTCACTTTTTGATGGCATTGATTTCTCGGAGCCATTGACAAGGGCGAGGTTTGAGGAGTTGAACATAGACTTGTTCAAGAAGACCATGGGGCCAGTCAAACAGGCTCTGCAAGATGCAGGGTTGAAGAAAACAGATATTGATGAGATTGTGCTTGTTGGAGGGAGCACTCGTATTCCCAAGGTGCAGCAGCTGTTGAAGGACTTCTTTGATGGGAAAGAACTGAACAAGGGTGTCAATCCTGATGAGGCTGTGGCCTATGGTGCTGCAGTTCAAGGTGGAGTCCTCAGCGGAGAAGGCGAGGAGGGTATCAAAGACCTTCTCTTGATTGAAGCTGCTCCTTTGAGTCTTGGAATCGAAACAGCTGGTGGTGTGATGACAAAATTGATTCCAAGGGGCACCAGTATTCCAACCAAGAAGTCACAAATCTTCACCACTTATCAAGACCAGCAAACCACAGTGTCAATCAAGGTTTTTGAAGGTGAAAGAAGCTTAACAAAGGATTGTCATGAGCTCGGAAAATTTGATCTAACAGGCATTCCACCTGCTCCAAGGGGAGTGCCACAAATTGAAGTGACGTTTGAGCTTGATGCGAATGGAATCCTACAAGTGAAAGCAGAGGACAAGGCTGCAAAGAAGTCTCAATCCATTACGATTACTAATGACAAGGGGCGCCTCAGCCAGGAAGAGATAGAGAGGATGGTGAAGGAAGCCGAGGAGTTTGCTGAAGAGGATAAGAAATTGAGAGAAAAGATAGATGCTAGGAACAAGCTTGAGACCTACATATACAATATGAGGAGTACTATCGGTGATAAGGATAAGCTGGCAGATAAGATTGACTCAGATGACAAGGAGAACATCGAAAACACACTGAAGGAGGCTCTGGAATGGTTGGATGATAACCAAAACGCAGAAAAAGATGATTTTGATGAGAAGCTGAAGGAGGTAGAAGCAGTGTGCAATCCAGTCATAAAGCAGATCTATGAGAAGAGTGGTGGAAGTTCTGCTGGTTCGCAGGAGGACGAAGATGAACCAAATGATGAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005788 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016043 GO:0016049 GO:0016592 GO:0022414 GO:0030154 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0070013 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04918 ko05020 map03060 map04141 map04918 map05020

Pfam Domains

Protein Families

HSP70

Protein Analysis

690

Amino Acids

76.53

Weight (kDa)

5.13

Isoelectric Point (pI)

34.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	64 - 669	1.7e-259	Hsp70 protein
MreB_Mbl	PF06723	179 - 430	1.6e-17	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09080 AT1G09080
fragaria_vesca	FvH4_6g06470
malus_domestica	MD12G1215200.v1.1
prunus_persica	Prupe.6G321700_v2.0.a1
pyrus_communis	pycom04g17760 pycom12g20120
rosa_chinensis	RchiOBHm_Chr2g0142601 RchiOBHm_Chr3g0455591 RchiOBHm_Chr3g0455611 RchiOBHm_Chr3g0455631
rosa_laevigata	RLG00000019973 RLG00000019974 RLG00000025345 RLG00000025351
rosa_multiflora	Rmu_co8491437.1_g000001 Rmu_sc0000223.1_g000003 Rmu_sc0005164.1_g000002 Rmu_sc0015502.1_g000002
rosa_roxburghii	Rroxscaffold_2G00102460
rosa_rugosa	Rorug03G0008500 Rorug03G0008700
rosa_samantha	Rh2AG426400 Rh2BG436000 Rh2CG412900 Rh2DG445800 Rh3AG067800 Rh3AG068000 Rh3DG070300
rosa_wichuraiana	Rw2G034940 Rw3G005440 Rw3G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	450
AarI	CACCTGC	1 cut(s)	1573
Acc36I	ACCTGC	1 cut(s)	1573
AccB1I	GGYRCC	2 cut(s)	1418, 1692
AccBSI	CCGCTC	1 cut(s)	319
AccI	GTMKAC	1 cut(s)	830
AccII	CGCG	1 cut(s)	719
AciI	CCGC	6 cut(s)	161, 319, 335, 388, 708, 1311
AclWI	GGATC	2 cut(s)	290, 407
AcoI	YGGCCR	1 cut(s)	705
AcsI	RAATTY	3 cut(s)	118, 137, 1541
AcuI	CTGAAG	3 cut(s)	1767, 1913, 1979
AcyI	GRCGYC	1 cut(s)	1693
AdeI	CACNNNGTG	1 cut(s)	877
AfaI	GTAC	5 cut(s)	236, 370, 778, 914, 1822
AfiI	CCNNNNNNNGG	3 cut(s)	640, 1003, 1702
AflIII	ACRYGT	1 cut(s)	86
AjnI	CCWGG	3 cut(s)	270, 1002, 1701
Alw21I	GWGCWC	2 cut(s)	1190, 1536
Alw26I	GTCTC	4 cut(s)	423, 834, 1665, 1790
AlwI	GGATC	2 cut(s)	290, 407
AlwNI	CAGNNNCTG	2 cut(s)	1129, 1213
AoxI	GGCC	4 cut(s)	705, 984, 1112, 1275
ApeKI	GCWGC	6 cut(s)	710, 1207, 1210, 1286, 1355, 1649
ApoI	RAATTY	3 cut(s)	118, 137, 1541
Asp700I	GAANNNNTTC	1 cut(s)	1223
AspLEI	GCGC	1 cut(s)	1695
AspS9I	GGNCC	3 cut(s)	186, 984, 1112
AsuC2I	CCSGG	2 cut(s)	183, 670
AsuHPI	GGTGA	6 cut(s)	512, 835, 1444, 1514, 1735, 1841
AvaII	GGWCC	1 cut(s)	186
AxyI	CCTNAGG	1 cut(s)	522
BaeGI	GKGCMC	1 cut(s)	1421
BanI	GGYRCC	2 cut(s)	1418, 1692
BanII	GRGCYC	3 cut(s)	675, 702, 1536
BbsI	GAAGAC	1 cut(s)	1109
Bbv12I	GWGCWC	2 cut(s)	1190, 1536
BbvCI	CCTCAGC	3 cut(s)	567, 1307, 1697
BbvI	GCAGC	6 cut(s)	722, 1219, 1222, 1273, 1342, 1636
BccI	CCATC	5 cut(s)	722, 874, 1028, 1226, 1714
BceAI	ACGGC	1 cut(s)	720
BcgI	CGANNNNNNTGC	4 cut(s)	989, 1023, 1724, 1758
BciT130I	CCWGG	3 cut(s)	272, 1004, 1703
BclI	TGATCA	1 cut(s)	900
BcnI	CCSGG	2 cut(s)	183, 670
BcoDI	GTCTC	4 cut(s)	423, 834, 1665, 1790
BfaI	CTAG	3 cut(s)	134, 728, 1782
BfmI	CTRYAG	2 cut(s)	945, 1287
BfoI	RGCGCY	1 cut(s)	1696
BfuAI	ACCTGC	1 cut(s)	1573
BglII	AGATCT	1 cut(s)	1998
BmcAI	AGTACT	1 cut(s)	1822
Bme1390I	CCNGG	5 cut(s)	183, 272, 670, 1004, 1703
Bme18I	GGWCC	1 cut(s)	186
BmgT120I	GGNCC	3 cut(s)	186, 984, 1112
BmiI	GGNNCC	6 cut(s)	187, 211, 1053, 1113, 1420, 1694
BmrFI	CCNGG	5 cut(s)	183, 272, 670, 1004, 1703
BmsI	GCATC	7 cut(s)	619, 643, 669, 801, 1126, 1600, 1768
BpiI	GAAGAC	1 cut(s)	1109
Bpu10I	CCTNAGC	3 cut(s)	567, 1307, 1697
BpuEI	CTTGAG	3 cut(s)	817, 1009, 1814
BpuMI	CCSGG	2 cut(s)	183, 670
Bsa29I	ATCGAT	1 cut(s)	201
BsaAI	YACGTR	1 cut(s)	216
BsaBI	GATNNNNATC	1 cut(s)	197
BsaHI	GRCGYC	1 cut(s)	1693
BsaI	GGTCTC	1 cut(s)	1790
BsaJI	CCNNGG	9 cut(s)	182, 271, 648, 702, 1107, 1200, 1412, 1571, 1734
BsaXI	ACNNNNNCTCC	4 cut(s)	1007, 1037, 1177, 1207
Bsc4I	CCNNNNNNNGG	3 cut(s)	640, 1003, 1702
Bse1I	ACTGG	4 cut(s)	759, 1115, 1422, 1985
Bse21I	CCTNAGG	1 cut(s)	522
Bse3DI	GCAATG	1 cut(s)	663
Bse8I	GATNNNNATC	1 cut(s)	197
BseBI	CCWGG	3 cut(s)	272, 1004, 1703
BseCI	ATCGAT	1 cut(s)	201
BseDI	CCNNGG	9 cut(s)	182, 271, 648, 702, 1107, 1200, 1412, 1571, 1734
BseGI	GGATG	3 cut(s)	658, 1725, 1921
BseJI	GATNNNNATC	1 cut(s)	197
BseLI	CCNNNNNNNGG	3 cut(s)	640, 1003, 1702
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	7 cut(s)	368, 513, 536, 558, 1321, 1711, 1875
BseNI	ACTGG	4 cut(s)	759, 1115, 1422, 1985
BseRI	GAGGAG	5 cut(s)	870, 1091, 1337, 1751, 1831
BseSI	GKGCMC	1 cut(s)	1421
BseX3I	CGGCCG	1 cut(s)	705
BseXI	GCAGC	6 cut(s)	722, 1219, 1222, 1273, 1342, 1636
BsgI	GTGCAG	1 cut(s)	1226
Bsh1236I	CGCG	1 cut(s)	719
Bsh1285I	CGRYCG	1 cut(s)	708
BshFI	GGCC	4 cut(s)	707, 986, 1114, 1277
BshNI	GGYRCC	2 cut(s)	1418, 1692
BshVI	ATCGAT	1 cut(s)	201
BsiEI	CGRYCG	1 cut(s)	708
BsiHKAI	GWGCWC	2 cut(s)	1190, 1536
BsiSI	CCGG	2 cut(s)	182, 669
BslFI	GGGAC	2 cut(s)	199, 479
BslI	CCNNNNNNNGG	3 cut(s)	640, 1003, 1702
BsmAI	GTCTC	4 cut(s)	423, 834, 1665, 1790
BsmFI	GGGAC	2 cut(s)	199, 479
BsmI	GAATGC	2 cut(s)	302, 1557
BsnI	GGCC	4 cut(s)	707, 986, 1114, 1277
Bso31I	GGTCTC	1 cut(s)	1790
Bsp1286I	GDGCHC	5 cut(s)	675, 702, 1190, 1421, 1536
Bsp1407I	TGTACA	1 cut(s)	234
Bsp19I	CCATGG	1 cut(s)	1107
BspACI	CCGC	6 cut(s)	161, 319, 335, 388, 708, 1311
BspANI	GGCC	4 cut(s)	707, 986, 1114, 1277
BspCNI	CTCAG	7 cut(s)	367, 514, 537, 559, 1320, 1710, 1874
BspDI	ATCGAT	1 cut(s)	201
BspFNI	CGCG	1 cut(s)	719
BspHI	TCATGA	1 cut(s)	1528
BspLI	GGNNCC	6 cut(s)	187, 211, 1053, 1113, 1420, 1694
BspMAI	CTGCAG	1 cut(s)	1291
BspMI	ACCTGC	1 cut(s)	1573
BspPI	GGATC	2 cut(s)	290, 407
BspT107I	GGYRCC	2 cut(s)	1418, 1692
BspTNI	GGTCTC	1 cut(s)	1790
BsrBI	CCGCTC	1 cut(s)	319
BsrDI	GCAATG	1 cut(s)	663
BsrGI	TGTACA	1 cut(s)	234
BsrI	ACTGG	4 cut(s)	759, 1115, 1422, 1985
BssECI	CCNNGG	9 cut(s)	182, 271, 648, 702, 1107, 1200, 1412, 1571, 1734
BssNI	GRCGYC	1 cut(s)	1693
BssT1I	CCWWGG	5 cut(s)	648, 1107, 1200, 1412, 1571
Bst2UI	CCWGG	3 cut(s)	272, 1004, 1703
Bst4CI	ACNGT	3 cut(s)	190, 610, 1480
Bst6I	CTCTTC	3 cut(s)	1701, 1743, 2003
BstACI	GRCGYC	1 cut(s)	1693
BstAUI	TGTACA	1 cut(s)	234
BstBAI	YACGTR	1 cut(s)	216
BstC8I	GCNNGC	4 cut(s)	642, 658, 998, 1845
BstDEI	CTNAG	8 cut(s)	354, 522, 545, 567, 978, 1307, 1697, 1861
BstDSI	CCRYGG	2 cut(s)	702, 1107
BstENI	CCTNNNNNAGG	1 cut(s)	1700
BstF5I	GGATG	3 cut(s)	658, 1725, 1921
BstFNI	CGCG	1 cut(s)	719
BstH2I	RGCGCY	1 cut(s)	1696
BstHHI	GCGC	1 cut(s)	1695
BstMAI	GTCTC	4 cut(s)	423, 834, 1665, 1790
BstMCI	CGRYCG	1 cut(s)	708
BstMWI	GCNNNNNNNGC	5 cut(s)	161, 716, 983, 1283, 1317
BstNI	CCWGG	3 cut(s)	272, 1004, 1703
BstNSI	RCATGY	1 cut(s)	90
BstSCI	CCNGG	5 cut(s)	181, 270, 668, 1002, 1701
BstSFI	CTRYAG	2 cut(s)	945, 1287
BstSLI	GKGCMC	1 cut(s)	1421
BstUI	CGCG	1 cut(s)	719
BstV1I	GCAGC	6 cut(s)	722, 1219, 1222, 1273, 1342, 1636
BstV2I	GAAGAC	1 cut(s)	1109
BstX2I	RGATCY	1 cut(s)	1998
BstYI	RGATCY	1 cut(s)	1998
BstZI	CGGCCG	1 cut(s)	705
Bsu15I	ATCGAT	1 cut(s)	201
Bsu36I	CCTNAGG	1 cut(s)	522
BsuRI	GGCC	4 cut(s)	707, 986, 1114, 1277
BsuTUI	ATCGAT	1 cut(s)	201
BtgI	CCRYGG	2 cut(s)	702, 1107
BtgZI	GCGATG	1 cut(s)	700
BtsCI	GGATG	3 cut(s)	658, 1725, 1921
BtsI	GCAGTG	1 cut(s)	1980
BtsIMutI	CAGTG	4 cut(s)	538, 1485, 1889, 1980
BveI	ACCTGC	1 cut(s)	1573
Cac8I	GCNNGC	4 cut(s)	642, 658, 998, 1845
CaiI	CAGNNNCTG	2 cut(s)	1129, 1213
CciI	TCATGA	1 cut(s)	1528
CfoI	GCGC	1 cut(s)	1695
Cfr13I	GGNCC	3 cut(s)	186, 984, 1112
ClaI	ATCGAT	1 cut(s)	201
CsiI	ACCWGGT	1 cut(s)	1002
Csp6I	GTAC	5 cut(s)	235, 369, 777, 913, 1821
CviAII	CATG	3 cut(s)	87, 1108, 1529
CviQI	GTAC	5 cut(s)	235, 369, 777, 913, 1821
DdeI	CTNAG	8 cut(s)	354, 522, 545, 567, 978, 1307, 1697, 1861
DinI	GGCGCC	1 cut(s)	1694
DraIII	CACNNNGTG	1 cut(s)	877
EaeI	YGGCCR	1 cut(s)	705
EagI	CGGCCG	1 cut(s)	705
Eam1104I	CTCTTC	3 cut(s)	1701, 1743, 2003
EarI	CTCTTC	3 cut(s)	1701, 1743, 2003
Ecl136II	GAGCTC	1 cut(s)	1534
EclXI	CGGCCG	1 cut(s)	705
Eco130I	CCWWGG	5 cut(s)	648, 1107, 1200, 1412, 1571
Eco24I	GRGCYC	3 cut(s)	675, 702, 1536
Eco31I	GGTCTC	1 cut(s)	1790
Eco47I	GGWCC	1 cut(s)	186
Eco52I	CGGCCG	1 cut(s)	705
Eco53kI	GAGCTC	1 cut(s)	1534
Eco57I	CTGAAG	3 cut(s)	1767, 1913, 1979
Eco81I	CCTNAGG	1 cut(s)	522
EcoICRI	GAGCTC	1 cut(s)	1534
EcoNI	CCTNNNNNAGG	1 cut(s)	1700
EcoO109I	RGGNCCY	1 cut(s)	984
EcoRI	GAATTC	1 cut(s)	137
EcoRII	CCWGG	3 cut(s)	270, 1002, 1701
EcoT14I	CCWWGG	5 cut(s)	648, 1107, 1200, 1412, 1571
EcoT38I	GRGCYC	3 cut(s)	675, 702, 1536
EgeI	GGCGCC	1 cut(s)	1694
EheI	GGCGCC	1 cut(s)	1694
ErhI	CCWWGG	5 cut(s)	648, 1107, 1200, 1412, 1571
FaeI	CATG	3 cut(s)	90, 1111, 1532
FalI	AAGNNNNNCTT	4 cut(s)	971, 1003, 1211, 1243
FaqI	GGGAC	2 cut(s)	199, 479
FatI	CATG	3 cut(s)	86, 1107, 1528
FbaI	TGATCA	1 cut(s)	900
FblI	GTMKAC	1 cut(s)	830
FokI	GGATG	3 cut(s)	665, 1732, 1928
FriOI	GRGCYC	3 cut(s)	675, 702, 1536
FspBI	CTAG	3 cut(s)	134, 728, 1782
GlaI	GCGC	1 cut(s)	1694
HaeII	RGCGCY	1 cut(s)	1696
HaeIII	GGCC	4 cut(s)	707, 986, 1114, 1277
HapII	CCGG	2 cut(s)	182, 669
HhaI	GCGC	1 cut(s)	1695
Hin1I	GRCGYC	1 cut(s)	1693
Hin1II	CATG	3 cut(s)	90, 1111, 1532
Hin6I	GCGC	1 cut(s)	1693
HinP1I	GCGC	1 cut(s)	1693
HincII	GTYRAC	1 cut(s)	27
HindII	GTYRAC	1 cut(s)	27
HindIII	AAGCTT	4 cut(s)	70, 953, 1510, 1790
HinfI	GANTC	9 cut(s)	198, 343, 1022, 1302, 1366, 1374, 1408, 1620, 1859
HpaII	CCGG	2 cut(s)	182, 669
HphI	GGTGA	6 cut(s)	512, 835, 1444, 1514, 1735, 1841
Hpy166II	GTNNAC	4 cut(s)	27, 235, 265, 831
Hpy188I	TCNGA	9 cut(s)	197, 209, 329, 357, 364, 426, 1051, 1538, 1864
Hpy8I	GTNNAC	4 cut(s)	27, 235, 265, 831
HpyAV	CCTTC	9 cut(s)	396, 550, 1213, 1310, 1349, 1493, 1720, 1888, 1954
HpyCH4III	ACNGT	3 cut(s)	190, 610, 1480
HpyCH4IV	ACGT	4 cut(s)	29, 215, 367, 1598
HpyCH4V	TGCA	8 cut(s)	302, 656, 1132, 1139, 1207, 1289, 1652, 1980
HpyF10VI	GCNNNNNNNGC	5 cut(s)	161, 716, 983, 1283, 1317
HpyF3I	CTNAG	8 cut(s)	354, 522, 545, 567, 978, 1307, 1697, 1861
HpySE526I	ACGT	4 cut(s)	29, 215, 367, 1598
Hsp92I	GRCGYC	1 cut(s)	1693
Hsp92II	CATG	3 cut(s)	90, 1111, 1532
HspAI	GCGC	1 cut(s)	1693
KasI	GGCGCC	1 cut(s)	1692
Ksp22I	TGATCA	1 cut(s)	900
LmnI	GCTCC	4 cut(s)	1051, 1185, 1363, 1573
Lsp1109I	GCAGC	6 cut(s)	722, 1219, 1222, 1273, 1342, 1636
LweI	GCATC	7 cut(s)	619, 643, 669, 801, 1126, 1600, 1768
MabI	ACCWGGT	1 cut(s)	1002
MaeI	CTAG	3 cut(s)	134, 728, 1782
MaeII	ACGT	4 cut(s)	29, 215, 367, 1598
MaeIII	GTNAC	5 cut(s)	64, 604, 1023, 1440, 1594
MbiI	CCGCTC	1 cut(s)	319
MflI	RGATCY	1 cut(s)	1998
MhlI	GDGCHC	5 cut(s)	675, 702, 1190, 1421, 1536
MluCI	AATT	7 cut(s)	118, 137, 372, 1403, 1541, 1587, 1760
Mly113I	GGCGCC	1 cut(s)	1693
MlyI	GAGTC	4 cut(s)	1031, 1311, 1375, 1853
MmeI	TCCRAC	3 cut(s)	1159, 1454, 1893
MroXI	GAANNNNTTC	1 cut(s)	1223
MseI	TTAA	4 cut(s)	408, 435, 495, 1514
MspA1I	CMGCKG	4 cut(s)	566, 1213, 1311, 1385
MspI	CCGG	2 cut(s)	182, 669
MspR9I	CCNGG	5 cut(s)	183, 272, 670, 1004, 1703
Mva1269I	GAATGC	2 cut(s)	302, 1557
MvaI	CCWGG	3 cut(s)	272, 1004, 1703
MvnI	CGCG	1 cut(s)	719
MwoI	GCNNNNNNNGC	5 cut(s)	161, 716, 983, 1283, 1317
NarI	GGCGCC	1 cut(s)	1693
NciI	CCSGG	2 cut(s)	183, 670
NcoI	CCATGG	1 cut(s)	1107
NlaIII	CATG	3 cut(s)	90, 1111, 1532
NlaIV	GGNNCC	6 cut(s)	187, 211, 1053, 1113, 1420, 1694
NmeAIII	GCCGAG	1 cut(s)	1759
NmuCI	GTSAC	3 cut(s)	1023, 1440, 1594
NspI	RCATGY	1 cut(s)	90
PagI	TCATGA	1 cut(s)	1528
PaqCI	CACCTGC	1 cut(s)	1573
PciI	ACATGT	1 cut(s)	86
PctI	GAATGC	2 cut(s)	302, 1557
PdmI	GAANNNNTTC	1 cut(s)	1223
PfeI	GAWTC	5 cut(s)	198, 343, 1374, 1408, 1620
PleI	GAGTC	4 cut(s)	1030, 1310, 1374, 1853
PluTI	GGCGCC	1 cut(s)	1696
PpsI	GAGTC	4 cut(s)	1030, 1310, 1374, 1853
Ppu21I	YACGTR	1 cut(s)	216
PscI	ACATGT	1 cut(s)	86
PsiI	TTATAA	1 cut(s)	450
Psp124BI	GAGCTC	1 cut(s)	1536
Psp6I	CCWGG	3 cut(s)	270, 1002, 1701
PspGI	CCWGG	3 cut(s)	270, 1002, 1701
PspN4I	GGNNCC	6 cut(s)	187, 211, 1053, 1113, 1420, 1694
PspPI	GGNCC	3 cut(s)	186, 984, 1112
PstI	CTGCAG	1 cut(s)	1291
PstNI	CAGNNNCTG	2 cut(s)	1129, 1213
PsuI	RGATCY	1 cut(s)	1998
PvuII	CAGCTG	3 cut(s)	566, 1213, 1385
RsaI	GTAC	5 cut(s)	236, 370, 778, 914, 1822
RsaNI	GTAC	5 cut(s)	235, 369, 777, 913, 1821
SacI	GAGCTC	1 cut(s)	1536
SaqAI	TTAA	4 cut(s)	408, 435, 495, 1514
Sau96I	GGNCC	3 cut(s)	186, 984, 1112
ScaI	AGTACT	1 cut(s)	1822
SchI	GAGTC	4 cut(s)	1031, 1311, 1375, 1853
ScrFI	CCNGG	5 cut(s)	183, 272, 670, 1004, 1703
SduI	GDGCHC	5 cut(s)	675, 702, 1190, 1421, 1536
SexAI	ACCWGGT	1 cut(s)	1002
SfaNI	GCATC	7 cut(s)	619, 643, 669, 801, 1126, 1600, 1768
SfcI	CTRYAG	2 cut(s)	945, 1287
SfoI	GGCGCC	1 cut(s)	1694
SinI	GGWCC	1 cut(s)	186
SmlI	CTYRAG	3 cut(s)	796, 988, 1793
SmoI	CTYRAG	3 cut(s)	796, 988, 1793
Sse9I	AATT	7 cut(s)	118, 137, 372, 1403, 1541, 1587, 1760
SsiI	CCGC	6 cut(s)	161, 319, 335, 388, 708, 1311
SspDI	GGCGCC	1 cut(s)	1692
SspMI	CTAG	3 cut(s)	134, 728, 1782
SstI	GAGCTC	1 cut(s)	1536
StyD4I	CCNGG	5 cut(s)	181, 270, 668, 1002, 1701
StyI	CCWWGG	5 cut(s)	648, 1107, 1200, 1412, 1571
TaaI	ACNGT	3 cut(s)	190, 610, 1480
TaiI	ACGT	4 cut(s)	32, 218, 370, 1601
TaqI	TCGA	8 cut(s)	83, 176, 201, 378, 819, 1009, 1377, 1881
TasI	AATT	7 cut(s)	118, 137, 372, 1403, 1541, 1587, 1760
TatI	WGTACW	3 cut(s)	234, 912, 1820
TauI	GCSGC	4 cut(s)	164, 338, 391, 710
TfiI	GAWTC	5 cut(s)	198, 343, 1374, 1408, 1620
Tru1I	TTAA	4 cut(s)	408, 435, 495, 1514
Tru9I	TTAA	4 cut(s)	408, 435, 495, 1514
TscAI	CASTG	4 cut(s)	538, 1485, 1896, 1980
TseFI	GTSAC	3 cut(s)	1023, 1440, 1594
TseI	GCWGC	6 cut(s)	710, 1207, 1210, 1286, 1355, 1649
Tsp45I	GTSAC	3 cut(s)	1023, 1440, 1594
TspDTI	ATGAA	6 cut(s)	17, 71, 162, 569, 880, 2064
TspGWI	ACGGA	1 cut(s)	323
TspRI	CASTG	4 cut(s)	538, 1485, 1896, 1980
VpaK11BI	GGWCC	1 cut(s)	186
XagI	CCTNNNNNAGG	1 cut(s)	1700
XapI	RAATTY	3 cut(s)	118, 137, 1541
XbaI	TCTAGA	1 cut(s)	727
XceI	RCATGY	1 cut(s)	90
XmiI	GTMKAC	1 cut(s)	830
XmnI	GAANNNNTTC	1 cut(s)	1223
XspI	CTAG	3 cut(s)	134, 728, 1782
ZrmI	AGTACT	1 cut(s)	1822

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.