Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004277

Physical Location & Seq

Genomic Coordinates Reverse (-)

5246789 .. 5249765

Gene Structure 2977 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ42251

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1986 bp

ATGAAGAACACCAGAGCATTGTCGTTGACGTTTTTGCTTCTCTTTCTTTCAGAATTCTTGTGTGGAATAGCATTGGCGGCAGAAAGTTCATCGAAGCCGGAGACCGTGATCGGAATCGATCTCGGAACCACGTATTCTTGTGTGGGGGTGTACAGGAATGGCAATGTAGATATCATAGTAAACGACCAGGGCAATAGGATCACACCCTCTTGGGTTGCATTCACGGACACCGAGCGGTTGATCGGAGAGGCGGCAAAGAATCAAGCCCCTCAGAACTCGGAACGTACAATTTTCGATGTCAAGCGGCTCATAGGGAGAAGGTTTAATGATCCAGAGGTTCAGAGAGACATTAAGTTTTTGCCTTATAAGGTTGTGAATAGGGACGGGAAGCCTTATATTCAGGTCAAGGTTAAAGGTGAGGACAAGGTGTTTAGCCCTGAGGAAATCAGTGCTATGATACTGAGTAAGATGAAGGAAACAGCTGAGGCTTATTTGGGGAAGAAGATCACAAGGGCTGTCGTAACAGTTCCAGCTTATTTCAATGATGCACAGAGGCAGGCTACCAAGGATGCAGGCATCATTTCCGGGCTCATAGTTGAGCGAATAATCAATGAGCCCACGGCCGCAGCCATCGCGTATGGTCTAGACAAAAAGGGGGAGAAGAACATATTGGTTTATGATCTTGGTGGTGGTACATTTGATGTAAGCATCTTGAGCATTGATAATGGTGTATTCGAGGTGAGGTCTACGAGTGGAGACACTCATTTGGGAGGAGAGGATTTCGACCACAGAGTGATGGACTATTTCATCAAGTTGATCAAGAAGAAGTACAACAAAGACATTAGCAAGGACAACAAGGCTATAGGGAAGCTTCGCAAGGAATGCGAGAGGGCTAAGAGGGCCTTGAGTAGCCAGCACCAGGTTCGAGTGGAGATTGAGTCACTTTTTGATGGCATTGATTTCTCGGAGCCATTGACAAGGGCGAGGTTTGAGGAGTTGAACATAGACTTGTTCAAGAAGACCATGGGCCCAGTCAAACAGGCTCTGCAAGATGCAGGGTTGAAGAAAACAGATATTGATGAGATTGTGCTTGTTGGAGGGAGCACTCGTATTCCGAAGGTGCAGCAGCTGTTGAAGGACTTCTTTGATGGGAAAGAACTGAACAAGGGTGTCAATCCTGATGAGGCTGTGGCCTATGGTGCGGCAGTTCAAGGTGGAGTCCTCAGCGGAGAAGGCGAGGAGGGTATCAAAGACCTTCTCTTGATTGAAGCTGCTCCTTTGAGTCTTGGAATCGAAACAGCTGGTGGTGTGATGACAAAATTGATTCCAAGGGGCACCACTATTCCAACCAAGAAGTCACAAATCTTCACCACTTATCAAGATCAGCAAACCACAGTGTCAATCAAGGTTTTTGAAGGTGAAAGAAGCTTAACAAAGGATTGTCATGAGCTCGGAAAATTTGATCTAACTGGCATTCCACCTGCTCCAAGGGGAGTGCCACAAATTGAAGTGACGTTTGAGCTTGATGCGAATGGAATCCTACAAGTGAAAGCAGAGGACAAGGCTGCAAAGAAGTCTCAATCCATTACGATTACTAATGACAAGGGGCGCCTCAGCCAGGAAGAGATAGAGAGGATGGTGAAGGAAGCCGAGGAGTTTGCTGAAGAGGATAAGAAATTGAGAGAAAAGATAGATGCTAGGAACAAGCTTGAGACCTACATATACAATATGAGGAGTACTATCGGTGATAAGGATAAGCTGGCAGATAAGATTGACTCGGATGACAAGGAGAACATCGAAAACACACTGAAGGAGGCTCTGGAATGGTTGGATGATAACCAAAACGCAGAAAAAGATGATTTTGATGAGAAGCTGAAGGAGGTAGAAGCAGTGTGCAATCCAGTCATAAAGCAGGTCTATGAGAAGAGTGGTGGAAGTTCTGCTGGTTCGCAGGAGGACGAAGATGAACCAAATGATGAGTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005783 GO:0005788 GO:0008150 GO:0009653 GO:0009826 GO:0009856 GO:0009860 GO:0009932 GO:0009987 GO:0012505 GO:0016043 GO:0016049 GO:0016592 GO:0022414 GO:0030154 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032989 GO:0032991 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044432 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0044706 GO:0048468 GO:0048588 GO:0048589 GO:0048856 GO:0048868 GO:0048869 GO:0051704 GO:0060560 GO:0070013 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko03060 ko04141 ko04918 ko05020 map03060 map04141 map04918 map05020

Pfam Domains

Protein Families

HSP70

Protein Analysis

661

Amino Acids

73.39

Weight (kDa)

5.07

Isoelectric Point (pI)

35.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HSP70	PF00012	36 - 641	4e-259	Hsp70 protein
MreB_Mbl	PF06723	151 - 402	3.7e-17	MreB/Mbl protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0004277)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G09080 AT1G09080
fragaria_vesca	FvH4_6g06470
malus_domestica	MD12G1215200.v1.1
prunus_persica	Prupe.6G321700_v2.0.a1
pyrus_communis	pycom04g17760 pycom12g20120
rosa_chinensis	RchiOBHm_Chr2g0142601 RchiOBHm_Chr3g0455591 RchiOBHm_Chr3g0455611 RchiOBHm_Chr3g0455631
rosa_laevigata	RLG00000019973 RLG00000019974 RLG00000025345 RLG00000025351
rosa_multiflora	Rmu_co8491437.1_g000001 Rmu_sc0000223.1_g000003 Rmu_sc0005164.1_g000002 Rmu_sc0015502.1_g000002
rosa_roxburghii	Rroxscaffold_2G00102460
rosa_rugosa	Rorug03G0008500 Rorug03G0008700
rosa_samantha	Rh2AG426400 Rh2BG436000 Rh2CG412900 Rh2DG445800 Rh3AG067800 Rh3AG068000 Rh3DG070300
rosa_wichuraiana	Rw2G034940 Rw3G005440 Rw3G005460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	366
AarI	CACCTGC	1 cut(s)	1489
Acc36I	ACCTGC	2 cut(s)	1489, 1903
AccB1I	GGYRCC	2 cut(s)	1334, 1608
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	1 cut(s)	746
AccII	CGCG	1 cut(s)	635
AciI	CCGC	7 cut(s)	77, 235, 251, 304, 624, 1202, 1227
AclWI	GGATC	2 cut(s)	206, 323
AcoI	YGGCCR	1 cut(s)	621
AcsI	RAATTY	2 cut(s)	53, 1457
AcuI	CTGAAG	3 cut(s)	1683, 1829, 1895
AcyI	GRCGYC	1 cut(s)	1609
AdeI	CACNNNGTG	1 cut(s)	793
AfaI	GTAC	5 cut(s)	152, 286, 694, 830, 1738
AfiI	CCNNNNNNNGG	2 cut(s)	919, 1618
AgsI	TTSAA	9 cut(s)	541, 1000, 1015, 1063, 1135, 1211, 1268, 1415, 1508
AjnI	CCWGG	3 cut(s)	186, 918, 1617
AjuI	GAANNNNNNNTTGG	2 cut(s)	653, 685
Alw21I	GWGCWC	2 cut(s)	1106, 1452
Alw26I	GTCTC	5 cut(s)	95, 339, 750, 1581, 1706
AlwI	GGATC	2 cut(s)	206, 323
AlwNI	CAGNNNCTG	2 cut(s)	1045, 1129
AoxI	GGCC	4 cut(s)	621, 900, 1027, 1191
ApaI	GGGCCC	1 cut(s)	1031
ApeKI	GCWGC	5 cut(s)	626, 1123, 1126, 1271, 1565
ApoI	RAATTY	2 cut(s)	53, 1457
Asp700I	GAANNNNTTC	1 cut(s)	1139
AspLEI	GCGC	1 cut(s)	1611
AspS9I	GGNCC	3 cut(s)	900, 1027, 1028
AsuC2I	CCSGG	1 cut(s)	586
AsuHPI	GGTGA	6 cut(s)	428, 751, 1360, 1430, 1651, 1757
AxyI	CCTNAGG	1 cut(s)	438
BaeGI	GKGCMC	2 cut(s)	1031, 1337
BanI	GGYRCC	2 cut(s)	1334, 1608
BanII	GRGCYC	4 cut(s)	591, 618, 1031, 1452
BbsI	GAAGAC	1 cut(s)	1025
Bbv12I	GWGCWC	2 cut(s)	1106, 1452
BbvCI	CCTCAGC	3 cut(s)	483, 1223, 1613
BbvI	GCAGC	5 cut(s)	638, 1135, 1138, 1258, 1552
BccI	CCATC	5 cut(s)	638, 790, 944, 1142, 1630
BceAI	ACGGC	1 cut(s)	636
BcgI	CGANNNNNNTGC	4 cut(s)	905, 939, 1640, 1674
BciT130I	CCWGG	3 cut(s)	188, 920, 1619
BclI	TGATCA	1 cut(s)	816
BcnI	CCSGG	1 cut(s)	586
BcoDI	GTCTC	5 cut(s)	95, 339, 750, 1581, 1706
BfaI	CTAG	2 cut(s)	644, 1698
BfmI	CTRYAG	1 cut(s)	861
BfoI	RGCGCY	1 cut(s)	1612
BfuAI	ACCTGC	2 cut(s)	1489, 1903
BmcAI	AGTACT	1 cut(s)	1738
Bme1390I	CCNGG	4 cut(s)	188, 586, 920, 1619
BmgT120I	GGNCC	3 cut(s)	900, 1027, 1028
BmiI	GGNNCC	5 cut(s)	127, 969, 1029, 1336, 1610
BmrFI	CCNGG	4 cut(s)	188, 586, 920, 1619
BmrI	ACTGGG	1 cut(s)	1025
BmsI	GCATC	7 cut(s)	535, 559, 585, 717, 1042, 1516, 1684
BmuI	ACTGGG	1 cut(s)	1025
BpiI	GAAGAC	1 cut(s)	1025
Bpu10I	CCTNAGC	3 cut(s)	483, 1223, 1613
BpuEI	CTTGAG	3 cut(s)	733, 925, 1730
BpuMI	CCSGG	1 cut(s)	586
Bsa29I	ATCGAT	1 cut(s)	117
BsaAI	YACGTR	1 cut(s)	132
BsaBI	GATNNNNATC	1 cut(s)	113
BsaHI	GRCGYC	1 cut(s)	1609
BsaI	GGTCTC	2 cut(s)	95, 1706
BsaJI	CCNNGG	7 cut(s)	187, 564, 618, 1023, 1328, 1487, 1650
BsaXI	ACNNNNNCTCC	4 cut(s)	923, 953, 1093, 1123
Bsc4I	CCNNNNNNNGG	2 cut(s)	919, 1618
Bse1I	ACTGG	3 cut(s)	1031, 1474, 1901
Bse21I	CCTNAGG	1 cut(s)	438
Bse3DI	GCAATG	1 cut(s)	169
Bse8I	GATNNNNATC	1 cut(s)	113
BseBI	CCWGG	3 cut(s)	188, 920, 1619
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	7 cut(s)	187, 564, 618, 1023, 1328, 1487, 1650
BseGI	GGATG	4 cut(s)	574, 1641, 1786, 1837
BseJI	GATNNNNATC	1 cut(s)	113
BseLI	CCNNNNNNNGG	2 cut(s)	919, 1618
BseMI	GCAATG	1 cut(s)	169
BseMII	CTCAG	6 cut(s)	284, 429, 452, 474, 1237, 1627
BseNI	ACTGG	3 cut(s)	1031, 1474, 1901
BseRI	GAGGAG	5 cut(s)	786, 1007, 1253, 1667, 1747
BseSI	GKGCMC	2 cut(s)	1031, 1337
BseX3I	CGGCCG	1 cut(s)	621
BseXI	GCAGC	5 cut(s)	638, 1135, 1138, 1258, 1552
BsgI	GTGCAG	1 cut(s)	1142
Bsh1236I	CGCG	1 cut(s)	635
Bsh1285I	CGRYCG	1 cut(s)	624
BshFI	GGCC	4 cut(s)	623, 902, 1029, 1193
BshNI	GGYRCC	2 cut(s)	1334, 1608
BshVI	ATCGAT	1 cut(s)	117
BsiEI	CGRYCG	1 cut(s)	624
BsiHKAI	GWGCWC	2 cut(s)	1106, 1452
BsiSI	CCGG	2 cut(s)	98, 585
BslFI	GGGAC	1 cut(s)	395
BslI	CCNNNNNNNGG	2 cut(s)	919, 1618
BsmAI	GTCTC	5 cut(s)	95, 339, 750, 1581, 1706
BsmFI	GGGAC	1 cut(s)	395
BsmI	GAATGC	3 cut(s)	218, 887, 1473
BsnI	GGCC	4 cut(s)	623, 902, 1029, 1193
Bso31I	GGTCTC	2 cut(s)	95, 1706
Bsp120I	GGGCCC	1 cut(s)	1027
Bsp1286I	GDGCHC	6 cut(s)	591, 618, 1031, 1106, 1337, 1452
Bsp1407I	TGTACA	1 cut(s)	150
Bsp19I	CCATGG	1 cut(s)	1023
BspACI	CCGC	7 cut(s)	77, 235, 251, 304, 624, 1202, 1227
BspANI	GGCC	4 cut(s)	623, 902, 1029, 1193
BspCNI	CTCAG	6 cut(s)	283, 430, 453, 475, 1236, 1626
BspDI	ATCGAT	1 cut(s)	117
BspFNI	CGCG	1 cut(s)	635
BspHI	TCATGA	1 cut(s)	1444
BspLI	GGNNCC	5 cut(s)	127, 969, 1029, 1336, 1610
BspMI	ACCTGC	2 cut(s)	1489, 1903
BspPI	GGATC	2 cut(s)	206, 323
BspT107I	GGYRCC	2 cut(s)	1334, 1608
BspTNI	GGTCTC	2 cut(s)	95, 1706
BsrBI	CCGCTC	1 cut(s)	235
BsrDI	GCAATG	1 cut(s)	169
BsrGI	TGTACA	1 cut(s)	150
BsrI	ACTGG	3 cut(s)	1031, 1474, 1901
BssECI	CCNNGG	7 cut(s)	187, 564, 618, 1023, 1328, 1487, 1650
BssNI	GRCGYC	1 cut(s)	1609
BssT1I	CCWWGG	4 cut(s)	564, 1023, 1328, 1487
Bst2UI	CCWGG	3 cut(s)	188, 920, 1619
Bst4CI	ACNGT	3 cut(s)	106, 526, 1396
Bst6I	CTCTTC	3 cut(s)	1617, 1659, 1919
BstACI	GRCGYC	1 cut(s)	1609
BstAPI	GCANNNNNTGC	1 cut(s)	882
BstAUI	TGTACA	1 cut(s)	150
BstBAI	YACGTR	1 cut(s)	132
BstC8I	GCNNGC	4 cut(s)	558, 574, 914, 1761
BstDEI	CTNAG	7 cut(s)	270, 438, 461, 483, 894, 1223, 1613
BstDSI	CCRYGG	2 cut(s)	618, 1023
BstENI	CCTNNNNNAGG	1 cut(s)	1616
BstF5I	GGATG	4 cut(s)	574, 1641, 1786, 1837
BstFNI	CGCG	1 cut(s)	635
BstH2I	RGCGCY	1 cut(s)	1612
BstHHI	GCGC	1 cut(s)	1611
BstMAI	GTCTC	5 cut(s)	95, 339, 750, 1581, 1706
BstMCI	CGRYCG	1 cut(s)	624
BstMWI	GCNNNNNNNGC	7 cut(s)	77, 632, 714, 882, 899, 1199, 1233
BstNI	CCWGG	3 cut(s)	188, 920, 1619
BstSCI	CCNGG	4 cut(s)	186, 584, 918, 1617
BstSFI	CTRYAG	1 cut(s)	861
BstSLI	GKGCMC	2 cut(s)	1031, 1337
BstUI	CGCG	1 cut(s)	635
BstV1I	GCAGC	5 cut(s)	638, 1135, 1138, 1258, 1552
BstV2I	GAAGAC	1 cut(s)	1025
BstZI	CGGCCG	1 cut(s)	621
Bsu15I	ATCGAT	1 cut(s)	117
Bsu36I	CCTNAGG	1 cut(s)	438
BsuRI	GGCC	4 cut(s)	623, 902, 1029, 1193
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	2 cut(s)	618, 1023
BtgZI	GCGATG	1 cut(s)	616
BtsCI	GGATG	4 cut(s)	574, 1641, 1786, 1837
BtsI	GCAGTG	1 cut(s)	1896
BtsIMutI	CAGTG	4 cut(s)	454, 1401, 1805, 1896
BveI	ACCTGC	2 cut(s)	1489, 1903
Cac8I	GCNNGC	4 cut(s)	558, 574, 914, 1761
CaiI	CAGNNNCTG	2 cut(s)	1045, 1129
CciI	TCATGA	1 cut(s)	1444
CfoI	GCGC	1 cut(s)	1611
Cfr13I	GGNCC	3 cut(s)	900, 1027, 1028
ClaI	ATCGAT	1 cut(s)	117
CsiI	ACCWGGT	1 cut(s)	918
Csp6I	GTAC	5 cut(s)	151, 285, 693, 829, 1737
CviAII	CATG	2 cut(s)	1024, 1445
CviQI	GTAC	5 cut(s)	151, 285, 693, 829, 1737
DdeI	CTNAG	7 cut(s)	270, 438, 461, 483, 894, 1223, 1613
DinI	GGCGCC	1 cut(s)	1610
DraIII	CACNNNGTG	1 cut(s)	793
EaeI	YGGCCR	1 cut(s)	621
EagI	CGGCCG	1 cut(s)	621
Eam1104I	CTCTTC	3 cut(s)	1617, 1659, 1919
EarI	CTCTTC	3 cut(s)	1617, 1659, 1919
Ecl136II	GAGCTC	1 cut(s)	1450
EclXI	CGGCCG	1 cut(s)	621
Eco130I	CCWWGG	4 cut(s)	564, 1023, 1328, 1487
Eco24I	GRGCYC	4 cut(s)	591, 618, 1031, 1452
Eco31I	GGTCTC	2 cut(s)	95, 1706
Eco32I	GATATC	1 cut(s)	172
Eco52I	CGGCCG	1 cut(s)	621
Eco53kI	GAGCTC	1 cut(s)	1450
Eco57I	CTGAAG	3 cut(s)	1683, 1829, 1895
Eco81I	CCTNAGG	1 cut(s)	438
EcoICRI	GAGCTC	1 cut(s)	1450
EcoNI	CCTNNNNNAGG	1 cut(s)	1616
EcoO109I	RGGNCCY	1 cut(s)	900
EcoRI	GAATTC	1 cut(s)	53
EcoRII	CCWGG	3 cut(s)	186, 918, 1617
EcoRV	GATATC	1 cut(s)	172
EcoT14I	CCWWGG	4 cut(s)	564, 1023, 1328, 1487
EcoT38I	GRGCYC	4 cut(s)	591, 618, 1031, 1452
EgeI	GGCGCC	1 cut(s)	1610
EheI	GGCGCC	1 cut(s)	1610
ErhI	CCWWGG	4 cut(s)	564, 1023, 1328, 1487
FaeI	CATG	2 cut(s)	1027, 1448
FalI	AAGNNNNNCTT	4 cut(s)	887, 919, 1127, 1159
FaqI	GGGAC	1 cut(s)	395
FatI	CATG	2 cut(s)	1023, 1444
FbaI	TGATCA	1 cut(s)	816
FblI	GTMKAC	1 cut(s)	746
FokI	GGATG	4 cut(s)	581, 1648, 1793, 1844
FriOI	GRGCYC	4 cut(s)	591, 618, 1031, 1452
FspBI	CTAG	2 cut(s)	644, 1698
GlaI	GCGC	1 cut(s)	1610
HaeII	RGCGCY	1 cut(s)	1612
HaeIII	GGCC	4 cut(s)	623, 902, 1029, 1193
HapII	CCGG	2 cut(s)	98, 585
HhaI	GCGC	1 cut(s)	1611
Hin1I	GRCGYC	1 cut(s)	1609
Hin1II	CATG	2 cut(s)	1027, 1448
Hin6I	GCGC	1 cut(s)	1609
HinP1I	GCGC	1 cut(s)	1609
HincII	GTYRAC	1 cut(s)	27
HindII	GTYRAC	1 cut(s)	27
HindIII	AAGCTT	3 cut(s)	869, 1426, 1706
HinfI	GANTC	9 cut(s)	114, 259, 938, 1218, 1282, 1290, 1324, 1536, 1775
HpaII	CCGG	2 cut(s)	98, 585
HphI	GGTGA	6 cut(s)	428, 751, 1360, 1430, 1651, 1757
Hpy166II	GTNNAC	4 cut(s)	27, 151, 181, 747
Hpy8I	GTNNAC	4 cut(s)	27, 151, 181, 747
HpyCH4III	ACNGT	3 cut(s)	106, 526, 1396
HpyCH4IV	ACGT	4 cut(s)	29, 131, 283, 1514
HpyCH4V	TGCA	8 cut(s)	218, 548, 572, 1048, 1055, 1123, 1568, 1896
HpyF10VI	GCNNNNNNNGC	7 cut(s)	77, 632, 714, 882, 899, 1199, 1233
HpyF3I	CTNAG	7 cut(s)	270, 438, 461, 483, 894, 1223, 1613
HpySE526I	ACGT	4 cut(s)	29, 131, 283, 1514
Hsp92I	GRCGYC	1 cut(s)	1609
Hsp92II	CATG	2 cut(s)	1027, 1448
HspAI	GCGC	1 cut(s)	1609
KasI	GGCGCC	1 cut(s)	1608
Ksp22I	TGATCA	1 cut(s)	816
LmnI	GCTCC	4 cut(s)	967, 1101, 1279, 1489
Lsp1109I	GCAGC	5 cut(s)	638, 1135, 1138, 1258, 1552
LweI	GCATC	7 cut(s)	535, 559, 585, 717, 1042, 1516, 1684
MabI	ACCWGGT	1 cut(s)	918
MaeI	CTAG	2 cut(s)	644, 1698
MaeII	ACGT	4 cut(s)	29, 131, 283, 1514
MaeIII	GTNAC	4 cut(s)	520, 939, 1356, 1510
MbiI	CCGCTC	1 cut(s)	235
MhlI	GDGCHC	6 cut(s)	591, 618, 1031, 1106, 1337, 1452
MluCI	AATT	6 cut(s)	53, 288, 1319, 1457, 1503, 1676
Mly113I	GGCGCC	1 cut(s)	1609
MlyI	GAGTC	4 cut(s)	947, 1227, 1291, 1769
MmeI	TCCRAC	3 cut(s)	1075, 1370, 1809
MroXI	GAANNNNTTC	1 cut(s)	1139
MseI	TTAA	4 cut(s)	324, 351, 411, 1430
MspA1I	CMGCKG	4 cut(s)	482, 1129, 1227, 1301
MspI	CCGG	2 cut(s)	98, 585
MspR9I	CCNGG	4 cut(s)	188, 586, 920, 1619
Mva1269I	GAATGC	3 cut(s)	218, 887, 1473
MvaI	CCWGG	3 cut(s)	188, 920, 1619
MvnI	CGCG	1 cut(s)	635
MwoI	GCNNNNNNNGC	7 cut(s)	77, 632, 714, 882, 899, 1199, 1233
NarI	GGCGCC	1 cut(s)	1609
NciI	CCSGG	1 cut(s)	586
NcoI	CCATGG	1 cut(s)	1023
NlaIII	CATG	2 cut(s)	1027, 1448
NlaIV	GGNNCC	5 cut(s)	127, 969, 1029, 1336, 1610
NmeAIII	GCCGAG	1 cut(s)	1675
NmuCI	GTSAC	3 cut(s)	939, 1356, 1510
PagI	TCATGA	1 cut(s)	1444
PaqCI	CACCTGC	1 cut(s)	1489
PctI	GAATGC	3 cut(s)	218, 887, 1473
PdmI	GAANNNNTTC	1 cut(s)	1139
PfeI	GAWTC	5 cut(s)	114, 259, 1290, 1324, 1536
PleI	GAGTC	4 cut(s)	946, 1226, 1290, 1769
PluTI	GGCGCC	1 cut(s)	1612
PpsI	GAGTC	4 cut(s)	946, 1226, 1290, 1769
Ppu21I	YACGTR	1 cut(s)	132
PsiI	TTATAA	1 cut(s)	366
Psp124BI	GAGCTC	1 cut(s)	1452
Psp6I	CCWGG	3 cut(s)	186, 918, 1617
PspGI	CCWGG	3 cut(s)	186, 918, 1617
PspN4I	GGNNCC	5 cut(s)	127, 969, 1029, 1336, 1610
PspOMI	GGGCCC	1 cut(s)	1027
PspPI	GGNCC	3 cut(s)	900, 1027, 1028
PstNI	CAGNNNCTG	2 cut(s)	1045, 1129
PvuII	CAGCTG	3 cut(s)	482, 1129, 1301
RsaI	GTAC	5 cut(s)	152, 286, 694, 830, 1738
RsaNI	GTAC	5 cut(s)	151, 285, 693, 829, 1737
SacI	GAGCTC	1 cut(s)	1452
SaqAI	TTAA	4 cut(s)	324, 351, 411, 1430
Sau96I	GGNCC	3 cut(s)	900, 1027, 1028
ScaI	AGTACT	1 cut(s)	1738
SchI	GAGTC	4 cut(s)	947, 1227, 1291, 1769
ScrFI	CCNGG	4 cut(s)	188, 586, 920, 1619
SduI	GDGCHC	6 cut(s)	591, 618, 1031, 1106, 1337, 1452
SexAI	ACCWGGT	1 cut(s)	918
SfaNI	GCATC	7 cut(s)	535, 559, 585, 717, 1042, 1516, 1684
SfcI	CTRYAG	1 cut(s)	861
SfoI	GGCGCC	1 cut(s)	1610
SmlI	CTYRAG	3 cut(s)	712, 904, 1709
SmoI	CTYRAG	3 cut(s)	712, 904, 1709
Sse9I	AATT	6 cut(s)	53, 288, 1319, 1457, 1503, 1676
SsiI	CCGC	7 cut(s)	77, 235, 251, 304, 624, 1202, 1227
SspDI	GGCGCC	1 cut(s)	1608
SspMI	CTAG	2 cut(s)	644, 1698
SstI	GAGCTC	1 cut(s)	1452
StyD4I	CCNGG	4 cut(s)	186, 584, 918, 1617
StyI	CCWWGG	4 cut(s)	564, 1023, 1328, 1487
TaaI	ACNGT	3 cut(s)	106, 526, 1396
TaiI	ACGT	4 cut(s)	32, 134, 286, 1517
TaqI	TCGA	8 cut(s)	92, 117, 294, 735, 783, 925, 1293, 1797
TasI	AATT	6 cut(s)	53, 288, 1319, 1457, 1503, 1676
TatI	WGTACW	3 cut(s)	150, 828, 1736
TauI	GCSGC	5 cut(s)	80, 254, 307, 626, 1205
TfiI	GAWTC	5 cut(s)	114, 259, 1290, 1324, 1536
Tru1I	TTAA	4 cut(s)	324, 351, 411, 1430
Tru9I	TTAA	4 cut(s)	324, 351, 411, 1430
TscAI	CASTG	4 cut(s)	454, 1401, 1812, 1896
TseFI	GTSAC	3 cut(s)	939, 1356, 1510
TseI	GCWGC	5 cut(s)	626, 1123, 1126, 1271, 1565
Tsp45I	GTSAC	3 cut(s)	939, 1356, 1510
TspDTI	ATGAA	5 cut(s)	17, 78, 485, 796, 1980
TspGWI	ACGGA	1 cut(s)	239
TspRI	CASTG	4 cut(s)	454, 1401, 1812, 1896
XagI	CCTNNNNNAGG	1 cut(s)	1616
XapI	RAATTY	2 cut(s)	53, 1457
XbaI	TCTAGA	1 cut(s)	643
XmiI	GTMKAC	1 cut(s)	746
XmnI	GAANNNNTTC	1 cut(s)	1139
XspI	CTAG	2 cut(s)	644, 1698
ZrmI	AGTACT	1 cut(s)	1738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.