Tumour suppressing sub-chromosomal transferable candidate 4
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13970 |
| fragaria_vesca | FvH4_6g20211 FvH4_6g54290 |
| malus_domestica | MD09G1002700.v1.1 MD17G1006900.v1.1 |
| prunus_persica | Prupe.3G313500_v2.0.a1 |
| pyrus_communis | pycom111g00220 pycom17g00250 |
| rosa_chinensis | RchiOBHm_Chr2g0176501 RchiOBHm_Chr3g0475791 |
| rosa_laevigata | RLG00000022418 RLG00000023817 |
| rosa_multiflora | Rmu_sc0000539.1_g000083 Rmu_sc0011904.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00076360 Rroxscaffold_6G00405880 |
| rosa_rugosa | Rorug02G0595200 Rorug02G0595300 Rorug03G0151700 |
| rosa_samantha | Rh2AG673500 Rh2CG647500 Rh2DG698400 Rh3AG201200 Rh3CG226300 Rh3DG226800 |
| rosa_wichuraiana | Rw2G055240 Rw3G018300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 351 |
| Acc36I | ACCTGC | 1 cut(s) | 386 |
| AciI | CCGC | 1 cut(s) | 462 |
| AclI | AACGTT | 1 cut(s) | 35 |
| AcsI | RAATTY | 2 cut(s) | 190, 421 |
| AfaI | GTAC | 1 cut(s) | 397 |
| AgsI | TTSAA | 2 cut(s) | 189, 195 |
| AjiI | CACGTC | 1 cut(s) | 265 |
| AluBI | AGCT | 1 cut(s) | 220 |
| AluI | AGCT | 1 cut(s) | 220 |
| Alw21I | GWGCWC | 1 cut(s) | 82 |
| ApeKI | GCWGC | 1 cut(s) | 454 |
| ApoI | RAATTY | 2 cut(s) | 190, 421 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 191, 223 |
| AspS9I | GGNCC | 3 cut(s) | 99, 229, 238 |
| AsuHPI | GGTGA | 2 cut(s) | 51, 122 |
| AvaII | GGWCC | 3 cut(s) | 99, 229, 238 |
| BanII | GRGCYC | 1 cut(s) | 155 |
| BauI | CACGAG | 1 cut(s) | 407 |
| BbsI | GAAGAC | 2 cut(s) | 78, 291 |
| Bbv12I | GWGCWC | 1 cut(s) | 82 |
| BbvI | GCAGC | 1 cut(s) | 441 |
| BccI | CCATC | 2 cut(s) | 44, 70 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 19, 53, 319, 353 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BfmI | CTRYAG | 1 cut(s) | 455 |
| BfuAI | ACCTGC | 1 cut(s) | 386 |
| BisI | GCNGC | 1 cut(s) | 455 |
| BlpI | GCTNAGC | 1 cut(s) | 312 |
| BlsI | GCNGC | 1 cut(s) | 456 |
| Bme18I | GGWCC | 3 cut(s) | 99, 229, 238 |
| BmgBI | CACGTC | 1 cut(s) | 265 |
| BmgT120I | GGNCC | 3 cut(s) | 99, 229, 238 |
| BmiI | GGNNCC | 2 cut(s) | 101, 152 |
| BpiI | GAAGAC | 2 cut(s) | 78, 291 |
| BpmI | CTGGAG | 1 cut(s) | 242 |
| Bpu10I | CCTNAGC | 1 cut(s) | 318 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 312 |
| BseGI | GGATG | 1 cut(s) | 349 |
| BseRI | GAGGAG | 2 cut(s) | 314, 371 |
| BseXI | GCAGC | 1 cut(s) | 441 |
| BsiHKAI | GWGCWC | 1 cut(s) | 82 |
| BsiSI | CCGG | 1 cut(s) | 341 |
| BslFI | GGGAC | 2 cut(s) | 85, 155 |
| BsmFI | GGGAC | 2 cut(s) | 85, 155 |
| Bsp1286I | GDGCHC | 2 cut(s) | 82, 155 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 312 |
| BspACI | CCGC | 1 cut(s) | 462 |
| BspLI | GGNNCC | 2 cut(s) | 101, 152 |
| BspMAI | CTGCAG | 1 cut(s) | 459 |
| BspMI | ACCTGC | 1 cut(s) | 386 |
| BssSI | CACGAG | 1 cut(s) | 407 |
| Bst2BI | CACGAG | 1 cut(s) | 407 |
| Bst4CI | ACNGT | 1 cut(s) | 395 |
| Bst6I | CTCTTC | 1 cut(s) | 119 |
| BstDEI | CTNAG | 2 cut(s) | 312, 318 |
| BstF5I | GGATG | 1 cut(s) | 349 |
| BstSFI | CTRYAG | 1 cut(s) | 455 |
| BstV1I | GCAGC | 1 cut(s) | 441 |
| BstV2I | GAAGAC | 2 cut(s) | 78, 291 |
| BtrI | CACGTC | 1 cut(s) | 265 |
| BtsCI | GGATG | 1 cut(s) | 349 |
| BtsI | GCAGTG | 1 cut(s) | 368 |
| BtsIMutI | CAGTG | 1 cut(s) | 368 |
| BveI | ACCTGC | 1 cut(s) | 386 |
| Cfr13I | GGNCC | 3 cut(s) | 99, 229, 238 |
| Csp6I | GTAC | 1 cut(s) | 396 |
| CviJI | RGCY | 9 cut(s) | 54, 153, 220, 316, 322, 328, 334, 387, 436 |
| CviKI_1 | RGCY | 9 cut(s) | 54, 153, 220, 316, 322, 328, 334, 387, 436 |
| CviQI | GTAC | 1 cut(s) | 396 |
| DdeI | CTNAG | 2 cut(s) | 312, 318 |
| Eam1104I | CTCTTC | 1 cut(s) | 119 |
| EarI | CTCTTC | 1 cut(s) | 119 |
| Eco24I | GRGCYC | 1 cut(s) | 155 |
| Eco47I | GGWCC | 3 cut(s) | 99, 229, 238 |
| EcoO109I | RGGNCCY | 1 cut(s) | 229 |
| EcoT38I | GRGCYC | 1 cut(s) | 155 |
| FaiI | YATR | 4 cut(s) | 338, 351, 470, 472 |
| FaqI | GGGAC | 2 cut(s) | 85, 155 |
| Fnu4HI | GCNGC | 1 cut(s) | 455 |
| FokI | GGATG | 1 cut(s) | 356 |
| FriOI | GRGCYC | 1 cut(s) | 155 |
| Fsp4HI | GCNGC | 1 cut(s) | 455 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GluI | GCNGC | 1 cut(s) | 455 |
| GsuI | CTGGAG | 1 cut(s) | 242 |
| HapII | CCGG | 1 cut(s) | 341 |
| HinfI | GANTC | 1 cut(s) | 185 |
| HpaII | CCGG | 1 cut(s) | 341 |
| HphI | GGTGA | 2 cut(s) | 51, 122 |
| Hpy188III | TCNNGA | 4 cut(s) | 47, 121, 236, 401 |
| Hpy99I | CGWCG | 5 cut(s) | 94, 251, 254, 257, 260 |
| HpyAV | CCTTC | 2 cut(s) | 220, 242 |
| HpyCH4III | ACNGT | 1 cut(s) | 395 |
| HpyCH4IV | ACGT | 2 cut(s) | 35, 264 |
| HpyCH4V | TGCA | 3 cut(s) | 177, 381, 457 |
| HpyF3I | CTNAG | 2 cut(s) | 312, 318 |
| HpySE526I | ACGT | 2 cut(s) | 35, 264 |
| LmnI | GCTCC | 4 cut(s) | 85, 150, 301, 358 |
| LpnPI | CCDG | 8 cut(s) | 93, 124, 187, 195, 206, 221, 354, 391 |
| Lsp1109I | GCAGC | 1 cut(s) | 441 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MaeII | ACGT | 2 cut(s) | 35, 264 |
| MaeIII | GTNAC | 1 cut(s) | 212 |
| MhlI | GDGCHC | 2 cut(s) | 82, 155 |
| MluCI | AATT | 3 cut(s) | 190, 369, 421 |
| MnlI | CCTC | 5 cut(s) | 106, 283, 292, 349, 405 |
| MseI | TTAA | 1 cut(s) | 372 |
| MspI | CCGG | 1 cut(s) | 341 |
| NlaIV | GGNNCC | 2 cut(s) | 101, 152 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 252, 255, 261 |
| PfeI | GAWTC | 1 cut(s) | 185 |
| PkrI | GCNGC | 1 cut(s) | 456 |
| PpuMI | RGGWCCY | 1 cut(s) | 229 |
| PsiI | TTATAA | 1 cut(s) | 351 |
| Psp1406I | AACGTT | 1 cut(s) | 35 |
| Psp5II | RGGWCCY | 1 cut(s) | 229 |
| PspN4I | GGNNCC | 2 cut(s) | 101, 152 |
| PspPI | GGNCC | 3 cut(s) | 99, 229, 238 |
| PspPPI | RGGWCCY | 1 cut(s) | 229 |
| PstI | CTGCAG | 1 cut(s) | 459 |
| RsaI | GTAC | 1 cut(s) | 397 |
| RsaNI | GTAC | 1 cut(s) | 396 |
| SaqAI | TTAA | 1 cut(s) | 372 |
| SatI | GCNGC | 1 cut(s) | 455 |
| Sau96I | GGNCC | 3 cut(s) | 99, 229, 238 |
| SduI | GDGCHC | 2 cut(s) | 82, 155 |
| SetI | ASST | 8 cut(s) | 38, 112, 222, 234, 243, 267, 294, 380 |
| SfcI | CTRYAG | 1 cut(s) | 455 |
| SinI | GGWCC | 3 cut(s) | 99, 229, 238 |
| Sse9I | AATT | 3 cut(s) | 190, 369, 421 |
| SsiI | CCGC | 1 cut(s) | 462 |
| SspMI | CTAG | 1 cut(s) | 47 |
| TaaI | ACNGT | 1 cut(s) | 395 |
| TaiI | ACGT | 2 cut(s) | 38, 267 |
| TaqI | TCGA | 4 cut(s) | 22, 39, 120, 402 |
| TasI | AATT | 3 cut(s) | 190, 369, 421 |
| TatI | WGTACW | 1 cut(s) | 395 |
| TfiI | GAWTC | 1 cut(s) | 185 |
| Tru1I | TTAA | 1 cut(s) | 372 |
| Tru9I | TTAA | 1 cut(s) | 372 |
| TscAI | CASTG | 1 cut(s) | 368 |
| TseI | GCWGC | 1 cut(s) | 454 |
| TspDTI | ATGAA | 1 cut(s) | 434 |
| TspGWI | ACGGA | 1 cut(s) | 72 |
| TspRI | CASTG | 1 cut(s) | 368 |
| VpaK11BI | GGWCC | 3 cut(s) | 99, 229, 238 |
| XapI | RAATTY | 2 cut(s) | 190, 421 |
| XbaI | TCTAGA | 1 cut(s) | 46 |
| XspI | CTAG | 1 cut(s) | 47 |