RchiOBHm_Chr3g0476741

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Forward (+)
22714804 .. 22716499
1696 bp
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UTR
Exon/CDS
Intron
PRQ44213

Sequence Viewer

Length: 195 bp
ATGTTCTTATCTGAGACATTATCAATGTCAGTCTCTTTCGCATTTCTGATAAAAAGTCCCAGTGGTGTACTTCCAACAACTAGGGAAGAGAAAAAAGAGTTCAAGGGTTGGCACTATGTAGCTTTACAGAAAACCTACCAAGCCAAGGCTGAGGCTGATTTTCTAGTATTGACCAAAGGGTTAGGACTCTTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

64

Amino Acids

7.22

Weight (kDa)

9.1

Isoelectric Point (pI)

46.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 69
AfiI CCNNNNNNNGG 1 cut(s) 145
AgsI TTSAA 1 cut(s) 103
AluBI AGCT 1 cut(s) 122
AluI AGCT 1 cut(s) 122
Alw26I GTCTC 2 cut(s) 8, 37
BbvCI CCTCAGC 1 cut(s) 150
BcoDI GTCTC 2 cut(s) 8, 37
BfaI CTAG 2 cut(s) 81, 164
BmrI ACTGGG 1 cut(s) 54
BmuI ACTGGG 1 cut(s) 54
Bpu10I CCTNAGC 1 cut(s) 150
BsaJI CCNNGG 1 cut(s) 144
Bsc4I CCNNNNNNNGG 1 cut(s) 145
Bse1I ACTGG 1 cut(s) 60
BseDI CCNNGG 1 cut(s) 144
BseLI CCNNNNNNNGG 1 cut(s) 145
BseMII CTCAG 1 cut(s) 141
BseNI ACTGG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 42
BslI CCNNNNNNNGG 1 cut(s) 145
BsmAI GTCTC 2 cut(s) 8, 37
BsmFI GGGAC 1 cut(s) 42
BspCNI CTCAG 2 cut(s) 4, 142
BsrI ACTGG 1 cut(s) 60
BssECI CCNNGG 1 cut(s) 144
BssT1I CCWWGG 1 cut(s) 144
Bst6I CTCTTC 1 cut(s) 81
BstDEI CTNAG 2 cut(s) 12, 150
BstMAI GTCTC 2 cut(s) 8, 37
BtsIMutI CAGTG 1 cut(s) 67
Csp6I GTAC 1 cut(s) 68
CviJI RGCY 4 cut(s) 122, 143, 149, 155
CviKI_1 RGCY 4 cut(s) 122, 143, 149, 155
CviQI GTAC 1 cut(s) 68
DdeI CTNAG 2 cut(s) 12, 150
Eam1104I CTCTTC 1 cut(s) 81
EarI CTCTTC 1 cut(s) 81
Eco130I CCWWGG 1 cut(s) 144
EcoT14I CCWWGG 1 cut(s) 144
ErhI CCWWGG 1 cut(s) 144
FaiI YATR 1 cut(s) 117
FaqI GGGAC 1 cut(s) 42
FspBI CTAG 2 cut(s) 81, 164
HinfI GANTC 1 cut(s) 186
Hpy166II GTNNAC 1 cut(s) 68
Hpy188I TCNGA 2 cut(s) 13, 48
Hpy8I GTNNAC 1 cut(s) 68
HpyF3I CTNAG 2 cut(s) 12, 150
LpnPI CCDG 1 cut(s) 73
MaeI CTAG 2 cut(s) 81, 164
MboII GAAGA 2 cut(s) 98, 181
MlyI GAGTC 1 cut(s) 180
MmeI TCCRAC 1 cut(s) 98
MnlI CCTC 1 cut(s) 145
PleI GAGTC 1 cut(s) 180
PpsI GAGTC 1 cut(s) 180
RsaI GTAC 1 cut(s) 69
RsaNI GTAC 1 cut(s) 68
SchI GAGTC 1 cut(s) 180
SetI ASST 2 cut(s) 124, 137
SgeI CNNG 6 cut(s) 72, 93, 115, 152, 157, 176
SspMI CTAG 2 cut(s) 81, 164
StyI CCWWGG 1 cut(s) 144
TatI WGTACW 1 cut(s) 67
TscAI CASTG 1 cut(s) 67
TspRI CASTG 1 cut(s) 67
XspI CTAG 2 cut(s) 81, 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.