Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003063

Physical Location & Seq

Genomic Coordinates Reverse (-)

57495640 .. 57499161

Gene Structure 3522 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ40183

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGCGTCGGTTGATCTCCTTCATTGTCTGATCCTCACCGTATTTCTGGCCTTTTCCTTTGCTGTATCTGTCCAAACTTCTGACATAGTCCCTTTCCAATGCTCTGCTGCAACAATCGCGAGGTGTAATGCCTCACTATACCACATCAACAGCGGTTTTCAGAAAGAAGAAATCGCCTCTTTTTACTCTGTCAATCCATCTCAAGTCAATCCTATAAAGTATCACAATAAAGACGATCATCTCATAAGTGTACCTTGTTCTTGCAAAAGCATATTCAACACTACTGGATATTTCTATGATACAATCTACAAAGTGAAACCGTCAGACACATTTGATGATGTTTCGAATAATATCTACAGTGGGCAAGTTTTATCTGTCATAGAAGAACGAAAGCACAACTTTACAATAGGAGCTGATTTTCCCATTCATCTTCCTTGTGGGTGTGTAGATAGTGATTCTCAGATTGTGGTAACATACACAGTTCAGGACAAAGATACACTGACAGATATTGCCACTCTGCTGTCTGCCAAGATAGAAAACATAGAAAGCATGAACAAGAATCAGGTTGAGAACCCGTCATACATACAACCCGGTTGGGTGTTGTTTGTGCCCTCGGAAAAGAATGGACTTAAAAAGCCAGCCCGATATAGAGATGTTATTTGTTGCATGCTGGTGTATCATGAATTTGTTGATGCAACAGTTTTTGAATCAGACGGACCGGTAGTATTTTCTCTCGAGGAGATAGAAGAGGCTACCGGTTATTTTGATGAAAGTAAGATCATTGGAGAGGGTGGATATGGTAAAGTATACTTCGGAGTACTAGGGGAAAAGGAGGTCGCCATAAAGAAGATGAGATCAAACATGTGCAAAGAATTCTTTGCAGAGCTAAAGGTCTTATGCAAGATCCATCACATTAATGTGGTTGAGCTTTTAGGGTACGCCAGTGGCCATGACCACCTCTACCTGGTCTATGAGTATATTCAGAATGGATCATTGAGCGAACATCTTCATGATCCATTGCTTAAAGGTCATCAGCCTCTCTCCTGGACTGCAAGAACACAAATTGCACTGGATACTGCAAAAGGTATTGAATACATTCATGACCACACAAAAGCTCGATATGTGCACCGTGATATAAAGACAAGTAACATTCTACTTGATGAGGGTCTCAGAGCAAAGGTAGCAGATTTTGGTTTGGCAAAGCTTGTTGGCAGAACCAATGAAGAAGATATTATAGCCACAAGACTCGTTGGAACACCGGGCTATCTCCCTCCAGAATCTGTGCAGGAGCTCCAGGTGACTCACAAGACTGATGTATTTGCATTTGGAGTGGTACTTGGAGAACTGATTACAGGGCAACTTGCACTGTTCCGTGACAACCGGGAGCCTGCAAAGATGAAATCTTTGATTACAGTAATAAAAAAGGTGTTCCAAGATGGTGAACCAGACTTAGCTTTGGAGGCTGTCACAGACCCTAGTCTCCAGGGCAACTATCCTATAGAAGAGATATTCAAGATGGCAGAAATATCAGAGTGGTGTTTGAGTGAAGAAGCAGTGGGAAGGCCAGAAATGAGAGAGATTGTTGTGCTGCTCTCACATATAGTGACAACCTCTACTGAGTGGGAAGCATCACTTGGCGGTAACAGTCAAGTTTTTAGTGGCTTGTTTAGTGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

559

Amino Acids

62.4

Weight (kDa)

5.19

Isoelectric Point (pI)

37.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	256 - 527	8.8e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	258 - 477	4.6e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25871 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950
malus_domestica	MD06G1169200.v1.1 MD13G1097500.v1.1 MD14G1174500.v1.1 MD16G1098600.v1.1
prunus_persica	Prupe.1G247900_v2.0.a1 Prupe.5G168000_v2.0.a1
pyrus_communis	pycom06g15070 pycom13g08510
rosa_chinensis	RchiOBHm_Chr4g0433311 RchiOBHm_Chr7g0192891
rosa_laevigata	RLG00000004315 RLG00000006764
rosa_multiflora	Rmu_co8450261.1_g000001 Rmu_sc0000354.1_g000008 Rmu_sc0002040.1_g000053
rosa_roxburghii	Rroxscaffold_3G00262570 Rroxscaffold_3G00262580 Rroxscaffold_5G00374870 Rroxscaffold_7G00191320
rosa_rugosa	Rorug04G0268000 Rorug07G0005400
rosa_samantha	Rh4AG322500 Rh4BG330000 Rh4CG345400 Rh4DG326700 Rh7AG131100 Rh7BG131900 Rh7CG135200 Rh7DG133000
rosa_wichuraiana	Rw0G023840 Rw4G027910 Rw7G011180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	807
AccII	CGCG	1 cut(s)	119
AciI	CCGC	2 cut(s)	153, 1638
AclWI	GGATC	4 cut(s)	25, 898, 997, 1007
AcoI	YGGCCR	1 cut(s)	946
AcsI	RAATTY	2 cut(s)	683, 872
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	4 cut(s)	252, 819, 938, 1335
AfiI	CCNNNNNNNGG	1 cut(s)	964
AflIII	ACRYGT	1 cut(s)	861
AgeI	ACCGGT	2 cut(s)	718, 755
AgsI	TTSAA	4 cut(s)	277, 707, 1091, 1513
AjnI	CCWGG	4 cut(s)	963, 1043, 1293, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1617, 1649
AluBI	AGCT	7 cut(s)	413, 886, 928, 1115, 1204, 1291, 1454
AluI	AGCT	7 cut(s)	413, 886, 928, 1115, 1204, 1291, 1454
Alw21I	GWGCWC	2 cut(s)	1128, 1293
Alw26I	GTCTC	2 cut(s)	1172, 1484
Alw44I	GTGCAC	1 cut(s)	1124
AlwI	GGATC	4 cut(s)	25, 898, 997, 1007
AlwNI	CAGNNNCTG	1 cut(s)	1280
Ama87I	CYCGRG	1 cut(s)	734
AoxI	GGCC	3 cut(s)	48, 946, 1562
ApaLI	GTGCAC	1 cut(s)	1124
ApeKI	GCWGC	2 cut(s)	107, 1588
ApoI	RAATTY	2 cut(s)	683, 872
AseI	ATTAAT	1 cut(s)	915
AsiGI	ACCGGT	2 cut(s)	718, 755
Asp700I	GAANNNNTTC	2 cut(s)	1005, 1095
AspS9I	GGNCC	1 cut(s)	716
AsuC2I	CCSGG	3 cut(s)	591, 1260, 1382
AsuHPI	GGTGA	3 cut(s)	28, 1309, 1451
AsuII	TTCGAA	1 cut(s)	344
AvaI	CYCGRG	1 cut(s)	734
AvaII	GGWCC	1 cut(s)	716
BaeGI	GKGCMC	2 cut(s)	612, 1128
BaeI	ACNNNNGTAYC	2 cut(s)	928, 961
BalI	TGGCCA	1 cut(s)	948
BanII	GRGCYC	1 cut(s)	1293
Bbv12I	GWGCWC	2 cut(s)	1128, 1293
BbvI	GCAGC	2 cut(s)	94, 1575
BccI	CCATC	4 cut(s)	205, 915, 1430, 1510
BciT130I	CCWGG	4 cut(s)	965, 1045, 1295, 1484
BciVI	GTATCC	1 cut(s)	1066
BcnI	CCSGG	3 cut(s)	591, 1260, 1382
BcoDI	GTCTC	2 cut(s)	1172, 1484
BfaI	CTAG	2 cut(s)	821, 1476
BfmI	CTRYAG	2 cut(s)	355, 1497
BfuI	GTATCC	1 cut(s)	1066
BisI	GCNGC	2 cut(s)	108, 1589
BlsI	GCNGC	2 cut(s)	109, 1590
BmcAI	AGTACT	1 cut(s)	819
Bme1390I	CCNGG	7 cut(s)	591, 965, 1045, 1260, 1295, 1382, 1484
Bme18I	GGWCC	1 cut(s)	716
BmeT110I	CYCGRG	1 cut(s)	734
BmgT120I	GGNCC	1 cut(s)	716
BmiI	GGNNCC	1 cut(s)	1386
BmrFI	CCNGG	7 cut(s)	591, 965, 1045, 1260, 1295, 1382, 1484
BmsI	GCATC	2 cut(s)	682, 1637
BoxI	GACNNNNGTC	1 cut(s)	1476
BpmI	CTGGAG	3 cut(s)	1257, 1277, 1466
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	186
BpuMI	CCSGG	3 cut(s)	591, 1260, 1382
BsaHI	GRCGYC	1 cut(s)	5
BsaI	GGTCTC	1 cut(s)	1172
BsaJI	CCNNGG	2 cut(s)	612, 1483
BsaWI	WCCGGW	2 cut(s)	718, 755
Bsc4I	CCNNNNNNNGG	1 cut(s)	964
Bse118I	RCCGGY	2 cut(s)	718, 755
Bse1I	ACTGG	3 cut(s)	289, 942, 1074
Bse3DI	GCAATG	1 cut(s)	1016
BseBI	CCWGG	4 cut(s)	965, 1045, 1295, 1484
BseDI	CCNNGG	2 cut(s)	612, 1483
BseLI	CCNNNNNNNGG	1 cut(s)	964
BseMI	GCAATG	1 cut(s)	1016
BseMII	CTCAG	3 cut(s)	473, 1183, 1608
BseNI	ACTGG	3 cut(s)	289, 942, 1074
BseRI	GAGGAG	1 cut(s)	752
BseSI	GKGCMC	2 cut(s)	612, 1128
BseXI	GCAGC	2 cut(s)	94, 1575
BsgI	GTGCAG	1 cut(s)	1304
Bsh1236I	CGCG	1 cut(s)	119
BshFI	GGCC	3 cut(s)	50, 948, 1564
BshTI	ACCGGT	2 cut(s)	718, 755
BsiHKAI	GWGCWC	2 cut(s)	1128, 1293
BsiHKCI	CYCGRG	1 cut(s)	734
BsiSI	CCGG	5 cut(s)	591, 719, 756, 1259, 1381
BslFI	GGGAC	1 cut(s)	74
BslI	CCNNNNNNNGG	1 cut(s)	964
BsmAI	GTCTC	2 cut(s)	1172, 1484
BsmFI	GGGAC	1 cut(s)	74
BsnI	GGCC	3 cut(s)	50, 948, 1564
Bso31I	GGTCTC	1 cut(s)	1172
BsoBI	CYCGRG	1 cut(s)	734
Bsp119I	TTCGAA	1 cut(s)	344
Bsp1286I	GDGCHC	3 cut(s)	612, 1128, 1293
Bsp143I	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
Bsp68I	TCGCGA	1 cut(s)	119
BspACI	CCGC	2 cut(s)	153, 1638
BspANI	GGCC	3 cut(s)	50, 948, 1564
BspCNI	CTCAG	3 cut(s)	472, 1182, 1609
BspFNI	CGCG	1 cut(s)	119
BspHI	TCATGA	3 cut(s)	679, 1009, 1099
BspLI	GGNNCC	1 cut(s)	1386
BspPI	GGATC	4 cut(s)	25, 898, 997, 1007
BspT104I	TTCGAA	1 cut(s)	344
BspTNI	GGTCTC	1 cut(s)	1172
BsrDI	GCAATG	1 cut(s)	1016
BsrFI	RCCGGY	2 cut(s)	718, 755
BsrI	ACTGG	3 cut(s)	289, 942, 1074
BssAI	RCCGGY	2 cut(s)	718, 755
BssECI	CCNNGG	2 cut(s)	612, 1483
BssMI	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
BssNAI	GTATAC	1 cut(s)	808
BssNI	GRCGYC	1 cut(s)	5
Bst1107I	GTATAC	1 cut(s)	808
Bst2UI	CCWGG	4 cut(s)	965, 1045, 1295, 1484
Bst4CI	ACNGT	9 cut(s)	40, 321, 359, 481, 700, 1130, 1368, 1414, 1646
Bst6I	CTCTTC	2 cut(s)	741, 1497
BstACI	GRCGYC	1 cut(s)	5
BstBI	TTCGAA	1 cut(s)	344
BstC8I	GCNNGC	3 cut(s)	639, 668, 1389
BstDEI	CTNAG	4 cut(s)	459, 1169, 1450, 1617
BstFNI	CGCG	1 cut(s)	119
BstKTI	GATC	8 cut(s)	16, 33, 238, 780, 857, 906, 992, 1015
BstMAI	GTCTC	2 cut(s)	1172, 1484
BstMBI	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 1181, 1460
BstNI	CCWGG	4 cut(s)	965, 1045, 1295, 1484
BstNSI	RCATGY	2 cut(s)	670, 865
BstPAI	GACNNNNGTC	1 cut(s)	1476
BstSCI	CCNGG	7 cut(s)	589, 963, 1043, 1258, 1293, 1380, 1482
BstSFI	CTRYAG	2 cut(s)	355, 1497
BstSLI	GKGCMC	2 cut(s)	612, 1128
BstUI	CGCG	1 cut(s)	119
BstV1I	GCAGC	2 cut(s)	94, 1575
BstX2I	RGATCY	1 cut(s)	903
BstYI	RGATCY	1 cut(s)	903
BstZ17I	GTATAC	1 cut(s)	808
BsuI	GTATCC	1 cut(s)	1066
BsuRI	GGCC	3 cut(s)	50, 948, 1564
BtsI	GCAGTG	1 cut(s)	1560
BtsIMutI	CAGTG	6 cut(s)	364, 497, 949, 1067, 1364, 1560
BtuMI	TCGCGA	1 cut(s)	119
Cac8I	GCNNGC	3 cut(s)	639, 668, 1389
CaiI	CAGNNNCTG	1 cut(s)	1280
CciI	TCATGA	3 cut(s)	679, 1009, 1099
Cfr10I	RCCGGY	2 cut(s)	718, 755
Cfr13I	GGNCC	1 cut(s)	716
CpoI	CGGWCCG	1 cut(s)	716
CsiI	ACCWGGT	1 cut(s)	963
Csp6I	GTAC	4 cut(s)	251, 818, 937, 1334
CspAI	ACCGGT	2 cut(s)	718, 755
CspI	CGGWCCG	1 cut(s)	716
CviAII	CATG	7 cut(s)	550, 667, 680, 862, 950, 1010, 1100
CviQI	GTAC	4 cut(s)	251, 818, 937, 1334
DdeI	CTNAG	4 cut(s)	459, 1169, 1450, 1617
DpnI	GATC	8 cut(s)	15, 32, 237, 779, 856, 905, 991, 1014
DpnII	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
EaeI	YGGCCR	1 cut(s)	946
Eam1104I	CTCTTC	2 cut(s)	741, 1497
EarI	CTCTTC	2 cut(s)	741, 1497
Ecl136II	GAGCTC	1 cut(s)	1291
Eco24I	GRGCYC	1 cut(s)	1293
Eco31I	GGTCTC	1 cut(s)	1172
Eco47I	GGWCC	1 cut(s)	716
Eco53kI	GAGCTC	1 cut(s)	1291
Eco88I	CYCGRG	1 cut(s)	734
EcoICRI	GAGCTC	1 cut(s)	1291
EcoRI	GAATTC	1 cut(s)	872
EcoRII	CCWGG	4 cut(s)	963, 1043, 1293, 1482
EcoT38I	GRGCYC	1 cut(s)	1293
FaeI	CATG	7 cut(s)	553, 670, 683, 865, 953, 1013, 1103
FalI	AAGNNNNNCTT	6 cut(s)	238, 270, 383, 415, 1617, 1649
FaqI	GGGAC	1 cut(s)	74
FatI	CATG	7 cut(s)	549, 666, 679, 861, 949, 1009, 1099
FblI	GTMKAC	1 cut(s)	807
Fnu4HI	GCNGC	2 cut(s)	108, 1589
FriOI	GRGCYC	1 cut(s)	1293
Fsp4HI	GCNGC	2 cut(s)	108, 1589
FspBI	CTAG	2 cut(s)	821, 1476
GluI	GCNGC	2 cut(s)	108, 1589
GsuI	CTGGAG	3 cut(s)	1257, 1277, 1466
HaeIII	GGCC	3 cut(s)	50, 948, 1564
HapII	CCGG	5 cut(s)	591, 719, 756, 1259, 1381
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	7 cut(s)	553, 670, 683, 865, 953, 1013, 1103
HindIII	AAGCTT	1 cut(s)	1202
HinfI	GANTC	6 cut(s)	455, 559, 707, 1245, 1277, 1300
HpaII	CCGG	5 cut(s)	591, 719, 756, 1259, 1381
HphI	GGTGA	3 cut(s)	28, 1309, 1451
Hpy166II	GTNNAC	4 cut(s)	251, 808, 1126, 1442
Hpy188III	TCNNGA	8 cut(s)	118, 485, 680, 734, 1010, 1100, 1274, 1513
Hpy8I	GTNNAC	4 cut(s)	251, 808, 1126, 1442
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	2 cut(s)	29, 1554
HpyCH4III	ACNGT	9 cut(s)	40, 321, 359, 481, 700, 1130, 1368, 1414, 1646
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 1181, 1460
HpyF3I	CTNAG	4 cut(s)	459, 1169, 1450, 1617
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	7 cut(s)	553, 670, 683, 865, 953, 1013, 1103
Kzo9I	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
LmnI	GCTCC	4 cut(s)	410, 1288, 1296, 1384
Lsp1109I	GCAGC	2 cut(s)	94, 1575
LweI	GCATC	2 cut(s)	682, 1637
MabI	ACCWGGT	1 cut(s)	963
MaeI	CTAG	2 cut(s)	821, 1476
MaeIII	GTNAC	7 cut(s)	469, 1145, 1297, 1373, 1465, 1603, 1640
MalI	GATC	8 cut(s)	15, 32, 237, 779, 856, 905, 991, 1014
MboI	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
MflI	RGATCY	1 cut(s)	903
MhlI	GDGCHC	3 cut(s)	612, 1128, 1293
MlsI	TGGCCA	1 cut(s)	948
MluCI	AATT	3 cut(s)	683, 872, 1062
MluNI	TGGCCA	1 cut(s)	948
MlyI	GAGTC	2 cut(s)	1239, 1294
MmeI	TCCRAC	1 cut(s)	1231
Mox20I	TGGCCA	1 cut(s)	948
MroXI	GAANNNNTTC	2 cut(s)	1005, 1095
MscI	TGGCCA	1 cut(s)	948
MseI	TTAA	3 cut(s)	630, 915, 1023
MslI	CAYNNNNRTG	4 cut(s)	671, 915, 917, 1008
Msp20I	TGGCCA	1 cut(s)	948
MspA1I	CMGCKG	1 cut(s)	153
MspI	CCGG	5 cut(s)	591, 719, 756, 1259, 1381
MspR9I	CCNGG	7 cut(s)	591, 965, 1045, 1260, 1295, 1382, 1484
MvaI	CCWGG	4 cut(s)	965, 1045, 1295, 1484
MvnI	CGCG	1 cut(s)	119
MwoI	GCNNNNNNNGC	3 cut(s)	116, 1181, 1460
NciI	CCSGG	3 cut(s)	591, 1260, 1382
NdeII	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
NlaIII	CATG	7 cut(s)	553, 670, 683, 865, 953, 1013, 1103
NlaIV	GGNNCC	1 cut(s)	1386
NmuCI	GTSAC	4 cut(s)	1297, 1373, 1465, 1603
NruI	TCGCGA	1 cut(s)	119
NspI	RCATGY	2 cut(s)	670, 865
NspV	TTCGAA	1 cut(s)	344
PaeI	GCATGC	1 cut(s)	670
PaeR7I	CTCGAG	1 cut(s)	734
PagI	TCATGA	3 cut(s)	679, 1009, 1099
PciI	ACATGT	1 cut(s)	861
PdmI	GAANNNNTTC	2 cut(s)	1005, 1095
PfeI	GAWTC	4 cut(s)	455, 559, 707, 1277
PflFI	GACNNNGTC	1 cut(s)	86
PfoI	TCCNGGA	1 cut(s)	1043
PinAI	ACCGGT	2 cut(s)	718, 755
PkrI	GCNGC	2 cut(s)	109, 1590
PleI	GAGTC	2 cut(s)	1239, 1294
PpsI	GAGTC	2 cut(s)	1239, 1294
PscI	ACATGT	1 cut(s)	861
PshAI	GACNNNNGTC	1 cut(s)	1476
PshBI	ATTAAT	1 cut(s)	915
Psp124BI	GAGCTC	1 cut(s)	1293
Psp6I	CCWGG	4 cut(s)	963, 1043, 1293, 1482
PspGI	CCWGG	4 cut(s)	963, 1043, 1293, 1482
PspN4I	GGNNCC	1 cut(s)	1386
PspPI	GGNCC	1 cut(s)	716
PsrI	GAACNNNNNNTAC	2 cut(s)	563, 595
PstNI	CAGNNNCTG	1 cut(s)	1280
PsuI	RGATCY	1 cut(s)	903
PsyI	GACNNNGTC	1 cut(s)	86
RruI	TCGCGA	1 cut(s)	119
RsaI	GTAC	4 cut(s)	252, 819, 938, 1335
RsaNI	GTAC	4 cut(s)	251, 818, 937, 1334
RseI	CAYNNNNRTG	4 cut(s)	671, 915, 917, 1008
Rsr2I	CGGWCCG	1 cut(s)	716
RsrII	CGGWCCG	1 cut(s)	716
SacI	GAGCTC	1 cut(s)	1293
SaqAI	TTAA	3 cut(s)	630, 915, 1023
SatI	GCNGC	2 cut(s)	108, 1589
Sau3AI	GATC	8 cut(s)	13, 30, 235, 777, 854, 903, 989, 1012
Sau96I	GGNCC	1 cut(s)	716
ScaI	AGTACT	1 cut(s)	819
SchI	GAGTC	2 cut(s)	1239, 1294
ScrFI	CCNGG	7 cut(s)	591, 965, 1045, 1260, 1295, 1382, 1484
SduI	GDGCHC	3 cut(s)	612, 1128, 1293
SexAI	ACCWGGT	1 cut(s)	963
SfaNI	GCATC	2 cut(s)	682, 1637
SfcI	CTRYAG	2 cut(s)	355, 1497
Sfr274I	CTCGAG	1 cut(s)	734
SfuI	TTCGAA	1 cut(s)	344
SinI	GGWCC	1 cut(s)	716
SlaI	CTCGAG	1 cut(s)	734
SmiMI	CAYNNNNRTG	4 cut(s)	671, 915, 917, 1008
SmlI	CTYRAG	2 cut(s)	201, 734
SmoI	CTYRAG	2 cut(s)	201, 734
SphI	GCATGC	1 cut(s)	670
Sse9I	AATT	3 cut(s)	683, 872, 1062
SsiI	CCGC	2 cut(s)	153, 1638
SspMI	CTAG	2 cut(s)	821, 1476
SstI	GAGCTC	1 cut(s)	1293
StyD4I	CCNGG	7 cut(s)	589, 963, 1043, 1258, 1293, 1380, 1482
TaaI	ACNGT	9 cut(s)	40, 321, 359, 481, 700, 1130, 1368, 1414, 1646
TaqI	TCGA	3 cut(s)	344, 735, 1117
TasI	AATT	3 cut(s)	683, 872, 1062
TatI	WGTACW	1 cut(s)	817
TfiI	GAWTC	4 cut(s)	455, 559, 707, 1277
Tru1I	TTAA	3 cut(s)	630, 915, 1023
Tru9I	TTAA	3 cut(s)	630, 915, 1023
TscAI	CASTG	6 cut(s)	364, 504, 949, 1074, 1371, 1560
TseFI	GTSAC	4 cut(s)	1297, 1373, 1465, 1603
TseI	GCWGC	2 cut(s)	107, 1588
Tsp45I	GTSAC	4 cut(s)	1297, 1373, 1465, 1603
TspDTI	ATGAA	9 cut(s)	11, 416, 566, 696, 783, 998, 1088, 1236, 1412
TspGWI	ACGGA	2 cut(s)	729, 1361
TspRI	CASTG	6 cut(s)	364, 504, 949, 1074, 1371, 1560
Tth111I	GACNNNGTC	1 cut(s)	86
VneI	GTGCAC	1 cut(s)	1124
VpaK11BI	GGWCC	1 cut(s)	716
VspI	ATTAAT	1 cut(s)	915
XapI	RAATTY	2 cut(s)	683, 872
XceI	RCATGY	2 cut(s)	670, 865
XhoI	CTCGAG	1 cut(s)	734
XmiI	GTMKAC	1 cut(s)	807
XmnI	GAANNNNTTC	2 cut(s)	1005, 1095
XspI	CTAG	2 cut(s)	821, 1476
ZrmI	AGTACT	1 cut(s)	819

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.