Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0003063

Physical Location & Seq

Genomic Coordinates Reverse (-)

49558787 .. 49562285

Gene Structure 3499 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG330000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1833 bp

ATGGCATTGGTTGATCTCCTTCATTGTCTGATCCTCACCGTATTTCTGGCCTTTTCCTTTGCTGTATCTGTCCAAACTTCTGACATAGTCCCTTTCCAATGCTCTGCTGCAACAATCGCGAGGTGTAATGCCTCACTATACCACATCAACAGCGGTTTTCAGAAAGAAGAAATCGCCTCTTTTTACTCTGTCGATCCATCTCAAGTCAATCCTATAAAGTATCACAATAAAGACGATCAACTCATAAGTGTACCTTGTTCTTGCAAAAGCATATTCAACACTACTGGATATTTCTATGATACAATCTACAAAGTGAAACCGTCAGACGGATTTGATAATGTTTCGAATAATATCTACAGTGGGCAAGTTTTATCTGTCATAGAAGAACGAAAGAACAACTTTACAATAGGAGCTGATTTTCCCATTCATCTTCCTTGTGGGTGTGTAGATAGTGATTCTCAGATTGTGGTAACATACACAGTTCAGGACAAAGATACACTGACAGATATTGCCACTCTGCTGTCTGCCAAGATAGAAAACATAGAAAGCATGAACAAGAATCAGGTTGAGAACCCGTCATACATACAACCCGGTTGGGTGTTGTTTGTGCCCTCGGAAAAGAATGGACTTAAAAAGCCAGGAAGCAGACACAAGTGGGCAATATTGGTTGGCATACTATCAGCTGTGACATTGCTTTCACTAAGCACATTCATCCTCCTCCTTTTTAGGAGAAAAGCTACAGCCGAAGGAAATATGGAAGCTCCAAAAGTTGTGTCCAAAACTTTGTCTGCCAATAAATCCTTTTTGTTGCATAATCAGTTGCTTCATCAGCAATACATGGAAGATGCAACAGTTTTTGAATCAGACGGACCAGTAGTATTTTCTCTCGAGGAGATAGAAGAGGCTACCGGTTATTTTGATGAAAGTAAGATCATTGGAGAGGGTGGATATGGTAAAGTATACTTCGGAGTACTAGGGGAAAAGGAGGTCGCCATAAAGAAGATGAGATCTAATAAGTGCAAAGAATTCTTTGCAGAGCTAAAGGTCTTATGCAAGATCCATCACATTAATGTGGTGGAGCTTTTAGGGTACGCCAGTGGCCAGGACCACCTCTACCTGGTCTATGAGTATATTCAGAATGGATCATTGAGCGAACATCTTCATGATCCATTGCTTAAAGGTCATCAGCCTCTCTCCTGGACTGCAAGAACACAAATTGCACTGGATACTGCAAAAGGTATTGAATACATTCATGACCACACAAAAGCTCGATATGTGCACCGTGATATAAAGACAAGTAACATTCTACTTGATGAGGGTCTCAGAGCAAAGGTAGCAGATTTTGGTTTGGCAAAGCTTGTTGGAAGAACCAATGAAGAAGATATTATAGCCACAAGACTCGTTGGAACACCGGGCTATCTCCCCCCAGAATCTGTGCAGGAGCTCCAGGTGACTCACAAGACTGATGTATTTGCATTTGGAGTGGTACTTGGAGAACTGATTACAGGGCAACTTGCACTGTTCCGTGACAACCGGGAGCCTGCAAAGATGAAATCTTTGATTACAGTAATAAAAAAGGTGTTCCAAGATGGTGAACCAGAATTAACTTTGGAGGCTGTCACAGACCCTAGTCTCCAGGGCAACTATCCTATAGAAGAGATATTCAAGATGGCAGAAATATCAGAGTGGTGTTTGAGTGAAGAAGCAGTGGGAAGGCCAGAGATGAGAGAGATTGTTGTGCTGCTCTCACAAATTGTGACAACCTCTACTGAGTGGGAAGCATCACTTGGCGGTAACAGTCAAGTTTTCAGTGGCTTGTTTGATGGAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LysM Pkinase Pkinase_Tyr

Protein Analysis

610

Amino Acids

67.9

Weight (kDa)

5.37

Isoelectric Point (pI)

39.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pkinase	PF00069	307 - 578	3.7e-46	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	309 - 578	1.9e-44	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003063)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g25871 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950 FvH4_5g05950
malus_domestica	MD06G1169200.v1.1 MD13G1097500.v1.1 MD14G1174500.v1.1 MD16G1098600.v1.1
prunus_persica	Prupe.1G247900_v2.0.a1 Prupe.5G168000_v2.0.a1
pyrus_communis	pycom06g15070 pycom13g08510
rosa_chinensis	RchiOBHm_Chr4g0433311 RchiOBHm_Chr7g0192891
rosa_laevigata	RLG00000004315 RLG00000006764
rosa_multiflora	Rmu_co8450261.1_g000001 Rmu_sc0000354.1_g000008 Rmu_sc0002040.1_g000053
rosa_roxburghii	Rroxscaffold_3G00262570 Rroxscaffold_3G00262580 Rroxscaffold_5G00374870 Rroxscaffold_7G00191320
rosa_rugosa	Rorug04G0268000 Rorug07G0005400
rosa_samantha	Rh4AG322500 Rh4BG330000 Rh4CG345400 Rh4DG326700 Rh7AG131100 Rh7BG131900 Rh7CG135200 Rh7DG133000
rosa_wichuraiana	Rw0G023840 Rw4G027910 Rw7G011180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	960
AccII	CGCG	1 cut(s)	119
AciI	CCGC	2 cut(s)	153, 1791
AclWI	GGATC	5 cut(s)	25, 188, 1051, 1150, 1160
AcoI	YGGCCR	1 cut(s)	1099
AcsI	RAATTY	1 cut(s)	1025
AfaI	GTAC	4 cut(s)	252, 972, 1091, 1488
AfiI	CCNNNNNNNGG	2 cut(s)	326, 1117
AgeI	ACCGGT	1 cut(s)	908
AgsI	TTSAA	4 cut(s)	277, 860, 1244, 1666
AjnI	CCWGG	6 cut(s)	637, 1101, 1116, 1196, 1446, 1635
AjuI	GAANNNNNNNTTGG	2 cut(s)	1770, 1802
AluBI	AGCT	9 cut(s)	413, 683, 737, 761, 1039, 1081, 1268, 1357, 1444
AluI	AGCT	9 cut(s)	413, 683, 737, 761, 1039, 1081, 1268, 1357, 1444
Alw21I	GWGCWC	2 cut(s)	1281, 1446
Alw26I	GTCTC	2 cut(s)	1325, 1637
Alw44I	GTGCAC	1 cut(s)	1277
AlwI	GGATC	5 cut(s)	25, 188, 1051, 1150, 1160
AlwNI	CAGNNNCTG	1 cut(s)	1433
Ama87I	CYCGRG	1 cut(s)	887
AoxI	GGCC	3 cut(s)	48, 1099, 1715
ApaLI	GTGCAC	1 cut(s)	1277
ApeKI	GCWGC	2 cut(s)	107, 1741
ApoI	RAATTY	1 cut(s)	1025
ArsI	GACNNNNNNTTYG	2 cut(s)	758, 790
AseI	ATTAAT	1 cut(s)	1068
AsiGI	ACCGGT	1 cut(s)	908
Asp700I	GAANNNNTTC	2 cut(s)	1158, 1248
AspS9I	GGNCC	2 cut(s)	869, 1105
AsuC2I	CCSGG	3 cut(s)	591, 1413, 1535
AsuHPI	GGTGA	3 cut(s)	28, 1462, 1604
AsuII	TTCGAA	1 cut(s)	344
AvaI	CYCGRG	1 cut(s)	887
AvaII	GGWCC	2 cut(s)	869, 1105
BaeGI	GKGCMC	2 cut(s)	612, 1281
BaeI	ACNNNNGTAYC	2 cut(s)	1081, 1114
BalI	TGGCCA	1 cut(s)	1101
BanII	GRGCYC	1 cut(s)	1446
Bbv12I	GWGCWC	2 cut(s)	1281, 1446
BbvI	GCAGC	2 cut(s)	94, 1728
BccI	CCATC	5 cut(s)	205, 1068, 1583, 1663, 1817
BciT130I	CCWGG	6 cut(s)	639, 1103, 1118, 1198, 1448, 1637
BciVI	GTATCC	1 cut(s)	1219
BcnI	CCSGG	3 cut(s)	591, 1413, 1535
BcoDI	GTCTC	2 cut(s)	1325, 1637
BfaI	CTAG	2 cut(s)	974, 1629
BfmI	CTRYAG	3 cut(s)	355, 738, 1650
BfuI	GTATCC	1 cut(s)	1219
BglII	AGATCT	1 cut(s)	1007
BisI	GCNGC	2 cut(s)	108, 1742
BlsI	GCNGC	2 cut(s)	109, 1743
BmcAI	AGTACT	1 cut(s)	972
Bme1390I	CCNGG	9 cut(s)	591, 639, 1103, 1118, 1198, 1413, 1448, 1535, 1637
Bme18I	GGWCC	2 cut(s)	869, 1105
BmeT110I	CYCGRG	1 cut(s)	887
BmgT120I	GGNCC	2 cut(s)	869, 1105
BmiI	GGNNCC	1 cut(s)	1539
BmrFI	CCNGG	9 cut(s)	591, 639, 1103, 1118, 1198, 1413, 1448, 1535, 1637
BmsI	GCATC	2 cut(s)	835, 1790
BoxI	GACNNNNGTC	1 cut(s)	1629
BpmI	CTGGAG	2 cut(s)	1430, 1619
Bpu14I	TTCGAA	1 cut(s)	344
BpuEI	CTTGAG	1 cut(s)	186
BpuMI	CCSGG	3 cut(s)	591, 1413, 1535
BsaI	GGTCTC	1 cut(s)	1325
BsaJI	CCNNGG	2 cut(s)	612, 1636
BsaWI	WCCGGW	1 cut(s)	908
Bsc4I	CCNNNNNNNGG	2 cut(s)	326, 1117
Bse118I	RCCGGY	1 cut(s)	908
Bse1I	ACTGG	4 cut(s)	289, 872, 1095, 1227
Bse3DI	GCAATG	2 cut(s)	689, 1169
BseBI	CCWGG	6 cut(s)	639, 1103, 1118, 1198, 1448, 1637
BseDI	CCNNGG	2 cut(s)	612, 1636
BseGI	GGATG	1 cut(s)	711
BseLI	CCNNNNNNNGG	2 cut(s)	326, 1117
BseMI	GCAATG	2 cut(s)	689, 1169
BseMII	CTCAG	3 cut(s)	473, 1336, 1761
BseNI	ACTGG	4 cut(s)	289, 872, 1095, 1227
BseRI	GAGGAG	2 cut(s)	707, 905
BseSI	GKGCMC	2 cut(s)	612, 1281
BseXI	GCAGC	2 cut(s)	94, 1728
BsgI	GTGCAG	1 cut(s)	1457
Bsh1236I	CGCG	1 cut(s)	119
BshFI	GGCC	3 cut(s)	50, 1101, 1717
BshTI	ACCGGT	1 cut(s)	908
BsiHKAI	GWGCWC	2 cut(s)	1281, 1446
BsiHKCI	CYCGRG	1 cut(s)	887
BsiSI	CCGG	4 cut(s)	591, 909, 1412, 1534
BslFI	GGGAC	1 cut(s)	74
BslI	CCNNNNNNNGG	2 cut(s)	326, 1117
BsmAI	GTCTC	2 cut(s)	1325, 1637
BsmFI	GGGAC	1 cut(s)	74
BsnI	GGCC	3 cut(s)	50, 1101, 1717
Bso31I	GGTCTC	1 cut(s)	1325
BsoBI	CYCGRG	1 cut(s)	887
Bsp119I	TTCGAA	1 cut(s)	344
Bsp1286I	GDGCHC	3 cut(s)	612, 1281, 1446
Bsp143I	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
Bsp68I	TCGCGA	1 cut(s)	119
BspACI	CCGC	2 cut(s)	153, 1791
BspANI	GGCC	3 cut(s)	50, 1101, 1717
BspCNI	CTCAG	3 cut(s)	472, 1335, 1762
BspFNI	CGCG	1 cut(s)	119
BspHI	TCATGA	2 cut(s)	1162, 1252
BspLI	GGNNCC	1 cut(s)	1539
BspPI	GGATC	5 cut(s)	25, 188, 1051, 1150, 1160
BspT104I	TTCGAA	1 cut(s)	344
BspTNI	GGTCTC	1 cut(s)	1325
BsrDI	GCAATG	2 cut(s)	689, 1169
BsrFI	RCCGGY	1 cut(s)	908
BsrI	ACTGG	4 cut(s)	289, 872, 1095, 1227
BssAI	RCCGGY	1 cut(s)	908
BssECI	CCNNGG	2 cut(s)	612, 1636
BssMI	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
BssNAI	GTATAC	1 cut(s)	961
Bst1107I	GTATAC	1 cut(s)	961
Bst2UI	CCWGG	6 cut(s)	639, 1103, 1118, 1198, 1448, 1637
Bst4CI	ACNGT	9 cut(s)	40, 321, 359, 481, 853, 1283, 1521, 1567, 1799
Bst6I	CTCTTC	2 cut(s)	894, 1650
BstBI	TTCGAA	1 cut(s)	344
BstC8I	GCNNGC	1 cut(s)	1542
BstDEI	CTNAG	4 cut(s)	459, 701, 1322, 1770
BstF5I	GGATG	1 cut(s)	711
BstFNI	CGCG	1 cut(s)	119
BstKTI	GATC	9 cut(s)	16, 33, 196, 238, 933, 1010, 1059, 1145, 1168
BstMAI	GTCTC	2 cut(s)	1325, 1637
BstMBI	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
BstMWI	GCNNNNNNNGC	3 cut(s)	116, 829, 1334
BstNI	CCWGG	6 cut(s)	639, 1103, 1118, 1198, 1448, 1637
BstPAI	GACNNNNGTC	1 cut(s)	1629
BstSCI	CCNGG	9 cut(s)	589, 637, 1101, 1116, 1196, 1411, 1446, 1533, 1635
BstSFI	CTRYAG	3 cut(s)	355, 738, 1650
BstSLI	GKGCMC	2 cut(s)	612, 1281
BstUI	CGCG	1 cut(s)	119
BstV1I	GCAGC	2 cut(s)	94, 1728
BstX2I	RGATCY	2 cut(s)	1007, 1056
BstYI	RGATCY	2 cut(s)	1007, 1056
BstZ17I	GTATAC	1 cut(s)	961
BsuI	GTATCC	1 cut(s)	1219
BsuRI	GGCC	3 cut(s)	50, 1101, 1717
BtsCI	GGATG	1 cut(s)	711
BtsI	GCAGTG	1 cut(s)	1713
BtsIMutI	CAGTG	7 cut(s)	364, 497, 1102, 1220, 1517, 1713, 1816
BtuMI	TCGCGA	1 cut(s)	119
Cac8I	GCNNGC	1 cut(s)	1542
CaiI	CAGNNNCTG	1 cut(s)	1433
CciI	TCATGA	2 cut(s)	1162, 1252
Cfr10I	RCCGGY	1 cut(s)	908
Cfr13I	GGNCC	2 cut(s)	869, 1105
CsiI	ACCWGGT	1 cut(s)	1116
Csp6I	GTAC	4 cut(s)	251, 971, 1090, 1487
CspAI	ACCGGT	1 cut(s)	908
CviAII	CATG	4 cut(s)	550, 838, 1163, 1253
CviQI	GTAC	4 cut(s)	251, 971, 1090, 1487
DdeI	CTNAG	4 cut(s)	459, 701, 1322, 1770
DpnI	GATC	9 cut(s)	15, 32, 195, 237, 932, 1009, 1058, 1144, 1167
DpnII	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
EaeI	YGGCCR	1 cut(s)	1099
Eam1104I	CTCTTC	2 cut(s)	894, 1650
EarI	CTCTTC	2 cut(s)	894, 1650
Ecl136II	GAGCTC	1 cut(s)	1444
Eco24I	GRGCYC	1 cut(s)	1446
Eco31I	GGTCTC	1 cut(s)	1325
Eco47I	GGWCC	2 cut(s)	869, 1105
Eco53kI	GAGCTC	1 cut(s)	1444
Eco88I	CYCGRG	1 cut(s)	887
EcoICRI	GAGCTC	1 cut(s)	1444
EcoRI	GAATTC	1 cut(s)	1025
EcoRII	CCWGG	6 cut(s)	637, 1101, 1116, 1196, 1446, 1635
EcoT38I	GRGCYC	1 cut(s)	1446
FaeI	CATG	4 cut(s)	553, 841, 1166, 1256
FalI	AAGNNNNNCTT	6 cut(s)	238, 270, 383, 415, 1770, 1802
FaqI	GGGAC	1 cut(s)	74
FatI	CATG	4 cut(s)	549, 837, 1162, 1252
FblI	GTMKAC	1 cut(s)	960
Fnu4HI	GCNGC	2 cut(s)	108, 1742
FokI	GGATG	1 cut(s)	698
FriOI	GRGCYC	1 cut(s)	1446
Fsp4HI	GCNGC	2 cut(s)	108, 1742
FspBI	CTAG	2 cut(s)	974, 1629
GluI	GCNGC	2 cut(s)	108, 1742
GsuI	CTGGAG	2 cut(s)	1430, 1619
HaeIII	GGCC	3 cut(s)	50, 1101, 1717
HapII	CCGG	4 cut(s)	591, 909, 1412, 1534
Hin1II	CATG	4 cut(s)	553, 841, 1166, 1256
HindIII	AAGCTT	1 cut(s)	1355
HinfI	GANTC	6 cut(s)	455, 559, 860, 1398, 1430, 1453
HpaII	CCGG	4 cut(s)	591, 909, 1412, 1534
HphI	GGTGA	3 cut(s)	28, 1462, 1604
Hpy166II	GTNNAC	4 cut(s)	251, 961, 1279, 1595
Hpy188III	TCNNGA	6 cut(s)	118, 485, 887, 1163, 1253, 1666
Hpy8I	GTNNAC	4 cut(s)	251, 961, 1279, 1595
HpyAV	CCTTC	3 cut(s)	29, 740, 1707
HpyCH4III	ACNGT	9 cut(s)	40, 321, 359, 481, 853, 1283, 1521, 1567, 1799
HpyF10VI	GCNNNNNNNGC	3 cut(s)	116, 829, 1334
HpyF3I	CTNAG	4 cut(s)	459, 701, 1322, 1770
Hsp92II	CATG	4 cut(s)	553, 841, 1166, 1256
Kzo9I	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
LmnI	GCTCC	6 cut(s)	410, 766, 1078, 1441, 1449, 1537
Lsp1109I	GCAGC	2 cut(s)	94, 1728
LweI	GCATC	2 cut(s)	835, 1790
MabI	ACCWGGT	1 cut(s)	1116
MaeI	CTAG	2 cut(s)	974, 1629
MaeIII	GTNAC	8 cut(s)	469, 685, 1298, 1450, 1526, 1618, 1756, 1793
MalI	GATC	9 cut(s)	15, 32, 195, 237, 932, 1009, 1058, 1144, 1167
MboI	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
MflI	RGATCY	2 cut(s)	1007, 1056
MhlI	GDGCHC	3 cut(s)	612, 1281, 1446
MlsI	TGGCCA	1 cut(s)	1101
MluCI	AATT	4 cut(s)	1025, 1215, 1601, 1752
MluNI	TGGCCA	1 cut(s)	1101
MlyI	GAGTC	2 cut(s)	1392, 1447
MmeI	TCCRAC	2 cut(s)	1342, 1384
Mox20I	TGGCCA	1 cut(s)	1101
MroXI	GAANNNNTTC	2 cut(s)	1158, 1248
MscI	TGGCCA	1 cut(s)	1101
MseI	TTAA	4 cut(s)	630, 1068, 1176, 1604
MslI	CAYNNNNRTG	3 cut(s)	1068, 1070, 1161
Msp20I	TGGCCA	1 cut(s)	1101
MspA1I	CMGCKG	2 cut(s)	153, 683
MspI	CCGG	4 cut(s)	591, 909, 1412, 1534
MspR9I	CCNGG	9 cut(s)	591, 639, 1103, 1118, 1198, 1413, 1448, 1535, 1637
MvaI	CCWGG	6 cut(s)	639, 1103, 1118, 1198, 1448, 1637
MvnI	CGCG	1 cut(s)	119
MwoI	GCNNNNNNNGC	3 cut(s)	116, 829, 1334
NciI	CCSGG	3 cut(s)	591, 1413, 1535
NdeII	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
NlaIII	CATG	4 cut(s)	553, 841, 1166, 1256
NlaIV	GGNNCC	1 cut(s)	1539
NmuCI	GTSAC	5 cut(s)	685, 1450, 1526, 1618, 1756
NruI	TCGCGA	1 cut(s)	119
NspV	TTCGAA	1 cut(s)	344
PaeR7I	CTCGAG	1 cut(s)	887
PagI	TCATGA	2 cut(s)	1162, 1252
PdmI	GAANNNNTTC	2 cut(s)	1158, 1248
PfeI	GAWTC	4 cut(s)	455, 559, 860, 1430
PflFI	GACNNNGTC	1 cut(s)	86
PfoI	TCCNGGA	1 cut(s)	1196
PinAI	ACCGGT	1 cut(s)	908
PkrI	GCNGC	2 cut(s)	109, 1743
PleI	GAGTC	2 cut(s)	1392, 1447
PpsI	GAGTC	2 cut(s)	1392, 1447
PshAI	GACNNNNGTC	1 cut(s)	1629
PshBI	ATTAAT	1 cut(s)	1068
Psp124BI	GAGCTC	1 cut(s)	1446
Psp6I	CCWGG	6 cut(s)	637, 1101, 1116, 1196, 1446, 1635
PspGI	CCWGG	6 cut(s)	637, 1101, 1116, 1196, 1446, 1635
PspN4I	GGNNCC	1 cut(s)	1539
PspPI	GGNCC	2 cut(s)	869, 1105
PsrI	GAACNNNNNNTAC	2 cut(s)	563, 595
PstNI	CAGNNNCTG	1 cut(s)	1433
PsuI	RGATCY	2 cut(s)	1007, 1056
PsyI	GACNNNGTC	1 cut(s)	86
PvuII	CAGCTG	1 cut(s)	683
RruI	TCGCGA	1 cut(s)	119
RsaI	GTAC	4 cut(s)	252, 972, 1091, 1488
RsaNI	GTAC	4 cut(s)	251, 971, 1090, 1487
RseI	CAYNNNNRTG	3 cut(s)	1068, 1070, 1161
SacI	GAGCTC	1 cut(s)	1446
SaqAI	TTAA	4 cut(s)	630, 1068, 1176, 1604
SatI	GCNGC	2 cut(s)	108, 1742
Sau3AI	GATC	9 cut(s)	13, 30, 193, 235, 930, 1007, 1056, 1142, 1165
Sau96I	GGNCC	2 cut(s)	869, 1105
ScaI	AGTACT	1 cut(s)	972
SchI	GAGTC	2 cut(s)	1392, 1447
ScrFI	CCNGG	9 cut(s)	591, 639, 1103, 1118, 1198, 1413, 1448, 1535, 1637
SduI	GDGCHC	3 cut(s)	612, 1281, 1446
SexAI	ACCWGGT	1 cut(s)	1116
SfaNI	GCATC	2 cut(s)	835, 1790
SfcI	CTRYAG	3 cut(s)	355, 738, 1650
Sfr274I	CTCGAG	1 cut(s)	887
SfuI	TTCGAA	1 cut(s)	344
SinI	GGWCC	2 cut(s)	869, 1105
SlaI	CTCGAG	1 cut(s)	887
SmiMI	CAYNNNNRTG	3 cut(s)	1068, 1070, 1161
SmlI	CTYRAG	2 cut(s)	201, 887
SmoI	CTYRAG	2 cut(s)	201, 887
Sse9I	AATT	4 cut(s)	1025, 1215, 1601, 1752
SsiI	CCGC	2 cut(s)	153, 1791
SspI	AATATT	1 cut(s)	663
SspMI	CTAG	2 cut(s)	974, 1629
SstI	GAGCTC	1 cut(s)	1446
StyD4I	CCNGG	9 cut(s)	589, 637, 1101, 1116, 1196, 1411, 1446, 1533, 1635
TaaI	ACNGT	9 cut(s)	40, 321, 359, 481, 853, 1283, 1521, 1567, 1799
TaqI	TCGA	4 cut(s)	192, 344, 888, 1270
TasI	AATT	4 cut(s)	1025, 1215, 1601, 1752
TatI	WGTACW	1 cut(s)	970
TfiI	GAWTC	4 cut(s)	455, 559, 860, 1430
Tru1I	TTAA	4 cut(s)	630, 1068, 1176, 1604
Tru9I	TTAA	4 cut(s)	630, 1068, 1176, 1604
TscAI	CASTG	7 cut(s)	364, 504, 1102, 1227, 1524, 1713, 1816
TseFI	GTSAC	5 cut(s)	685, 1450, 1526, 1618, 1756
TseI	GCWGC	2 cut(s)	107, 1741
Tsp45I	GTSAC	5 cut(s)	685, 1450, 1526, 1618, 1756
TspGWI	ACGGA	3 cut(s)	342, 882, 1514
TspRI	CASTG	7 cut(s)	364, 504, 1102, 1227, 1524, 1713, 1816
Tth111I	GACNNNGTC	1 cut(s)	86
VneI	GTGCAC	1 cut(s)	1277
VpaK11BI	GGWCC	2 cut(s)	869, 1105
VspI	ATTAAT	1 cut(s)	1068
XapI	RAATTY	1 cut(s)	1025
XhoI	CTCGAG	1 cut(s)	887
XmiI	GTMKAC	1 cut(s)	960
XmnI	GAANNNNTTC	2 cut(s)	1158, 1248
XspI	CTAG	2 cut(s)	974, 1629
ZrmI	AGTACT	1 cut(s)	972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.