Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0006921 RchiOBHm_Chr5g0006931 RchiOBHm_Chr5g0007041 RchiOBHm_Chr5g0007191 RchiOBHm_Chr5g0007351 |
| rosa_laevigata | RLG00000031441 RLG00000031449 RLG00000031452 |
| rosa_roxburghii | Rroxscaffold_1G00069130 |
| rosa_rugosa | Rorug04G0425600 Rorug04G0425900 Rorug04G0426200 Rorug04G0426300 Rorug04G0426400 |
| rosa_samantha | Rh5AG053200 Rh5AG053500 Rh5AG053800 Rh5AG054700 Rh5CG060800 Rh5CG061100 Rh5CG061200 Rh5CG061400 |
| rosa_wichuraiana | Rw5G005120 Rw5G005160 Rw5G005530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 257 |
| AccB1I | GGYRCC | 1 cut(s) | 257 |
| AcuI | CTGAAG | 1 cut(s) | 72 |
| AfaI | GTAC | 4 cut(s) | 237, 259, 445, 532 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 395 |
| AgsI | TTSAA | 5 cut(s) | 87, 158, 184, 422, 441 |
| AluBI | AGCT | 3 cut(s) | 154, 190, 280 |
| AluI | AGCT | 3 cut(s) | 154, 190, 280 |
| Alw26I | GTCTC | 1 cut(s) | 11 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 50 |
| ApeKI | GCWGC | 2 cut(s) | 296, 490 |
| Asp718I | GGTACC | 1 cut(s) | 257 |
| AsuHPI | GGTGA | 1 cut(s) | 368 |
| BanI | GGYRCC | 1 cut(s) | 257 |
| BbvI | GCAGC | 2 cut(s) | 283, 502 |
| BccI | CCATC | 3 cut(s) | 385, 407, 529 |
| BceAI | ACGGC | 1 cut(s) | 176 |
| BcoDI | GTCTC | 1 cut(s) | 11 |
| BfaI | CTAG | 1 cut(s) | 407 |
| BfmI | CTRYAG | 1 cut(s) | 426 |
| BglII | AGATCT | 1 cut(s) | 403 |
| BisI | GCNGC | 2 cut(s) | 297, 491 |
| BlsI | GCNGC | 2 cut(s) | 298, 492 |
| BmcAI | AGTACT | 1 cut(s) | 445 |
| BmiI | GGNNCC | 3 cut(s) | 22, 259, 504 |
| BsaWI | WCCGGW | 1 cut(s) | 260 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 395 |
| Bse1I | ACTGG | 3 cut(s) | 307, 332, 457 |
| Bse3DI | GCAATG | 2 cut(s) | 291, 463 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BseMI | GCAATG | 2 cut(s) | 291, 463 |
| BseNI | ACTGG | 3 cut(s) | 307, 332, 457 |
| BseRI | GAGGAG | 1 cut(s) | 221 |
| BseXI | GCAGC | 2 cut(s) | 283, 502 |
| BshNI | GGYRCC | 1 cut(s) | 257 |
| BsiSI | CCGG | 1 cut(s) | 261 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 395 |
| BsmAI | GTCTC | 1 cut(s) | 11 |
| Bsp143I | GATC | 1 cut(s) | 403 |
| BspLI | GGNNCC | 3 cut(s) | 22, 259, 504 |
| BspQI | GCTCTTC | 1 cut(s) | 321 |
| BspT107I | GGYRCC | 1 cut(s) | 257 |
| BsrDI | GCAATG | 2 cut(s) | 291, 463 |
| BsrI | ACTGG | 3 cut(s) | 307, 332, 457 |
| BssMI | GATC | 1 cut(s) | 403 |
| Bst4CI | ACNGT | 2 cut(s) | 226, 273 |
| Bst6I | CTCTTC | 3 cut(s) | 48, 321, 372 |
| BstKTI | GATC | 1 cut(s) | 406 |
| BstMAI | GTCTC | 1 cut(s) | 11 |
| BstMBI | GATC | 1 cut(s) | 403 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 160 |
| BstSFI | CTRYAG | 1 cut(s) | 426 |
| BstV1I | GCAGC | 2 cut(s) | 283, 502 |
| BstX2I | RGATCY | 1 cut(s) | 403 |
| BstYI | RGATCY | 1 cut(s) | 403 |
| BtgZI | GCGATG | 1 cut(s) | 228 |
| BtsIMutI | CAGTG | 1 cut(s) | 450 |
| CaiI | CAGNNNCTG | 1 cut(s) | 50 |
| Csp6I | GTAC | 4 cut(s) | 236, 258, 444, 531 |
| CviQI | GTAC | 4 cut(s) | 236, 258, 444, 531 |
| DpnI | GATC | 1 cut(s) | 405 |
| DpnII | GATC | 1 cut(s) | 403 |
| Eam1104I | CTCTTC | 3 cut(s) | 48, 321, 372 |
| EarI | CTCTTC | 3 cut(s) | 48, 321, 372 |
| Eco57I | CTGAAG | 1 cut(s) | 72 |
| FaiI | YATR | 1 cut(s) | 520 |
| Fnu4HI | GCNGC | 2 cut(s) | 297, 491 |
| Fsp4HI | GCNGC | 2 cut(s) | 297, 491 |
| FspBI | CTAG | 1 cut(s) | 407 |
| GluI | GCNGC | 2 cut(s) | 297, 491 |
| HapII | CCGG | 1 cut(s) | 261 |
| HinfI | GANTC | 4 cut(s) | 4, 41, 47, 422 |
| HpaII | CCGG | 1 cut(s) | 261 |
| HphI | GGTGA | 1 cut(s) | 368 |
| Hpy188I | TCNGA | 2 cut(s) | 46, 52 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 284, 407 |
| HpyAV | CCTTC | 3 cut(s) | 11, 28, 491 |
| HpyCH4III | ACNGT | 2 cut(s) | 226, 273 |
| HpyCH4V | TGCA | 2 cut(s) | 176, 299 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 160 |
| KpnI | GGTACC | 1 cut(s) | 261 |
| Kzo9I | GATC | 1 cut(s) | 403 |
| LguI | GCTCTTC | 1 cut(s) | 321 |
| LmnI | GCTCC | 2 cut(s) | 20, 502 |
| LpnPI | CCDG | 9 cut(s) | 109, 274, 288, 297, 308, 345, 438, 480, 519 |
| Lsp1109I | GCAGC | 2 cut(s) | 283, 502 |
| MaeI | CTAG | 1 cut(s) | 407 |
| MalI | GATC | 1 cut(s) | 405 |
| MboI | GATC | 1 cut(s) | 403 |
| MboII | GAAGA | 8 cut(s) | 43, 65, 181, 338, 386, 389, 395, 422 |
| MflI | RGATCY | 1 cut(s) | 403 |
| MluCI | AATT | 3 cut(s) | 179, 306, 315 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 8 cut(s) | 34, 49, 94, 199, 223, 364, 373, 388 |
| MseI | TTAA | 1 cut(s) | 552 |
| MslI | CAYNNNNRTG | 1 cut(s) | 354 |
| MspI | CCGG | 1 cut(s) | 261 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 160 |
| NdeII | GATC | 1 cut(s) | 403 |
| NlaIV | GGNNCC | 3 cut(s) | 22, 259, 504 |
| PciSI | GCTCTTC | 1 cut(s) | 321 |
| PfeI | GAWTC | 3 cut(s) | 41, 47, 422 |
| PkrI | GCNGC | 2 cut(s) | 298, 492 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| PspN4I | GGNNCC | 3 cut(s) | 22, 259, 504 |
| PstNI | CAGNNNCTG | 1 cut(s) | 50 |
| PsuI | RGATCY | 1 cut(s) | 403 |
| RsaI | GTAC | 4 cut(s) | 237, 259, 445, 532 |
| RsaNI | GTAC | 4 cut(s) | 236, 258, 444, 531 |
| RseI | CAYNNNNRTG | 1 cut(s) | 354 |
| SapI | GCTCTTC | 1 cut(s) | 321 |
| SaqAI | TTAA | 1 cut(s) | 552 |
| SatI | GCNGC | 2 cut(s) | 297, 491 |
| Sau3AI | GATC | 1 cut(s) | 403 |
| ScaI | AGTACT | 1 cut(s) | 445 |
| SchI | GAGTC | 1 cut(s) | 13 |
| SetI | ASST | 8 cut(s) | 69, 156, 192, 247, 282, 469, 483, 517 |
| SfcI | CTRYAG | 1 cut(s) | 426 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 354 |
| Sse9I | AATT | 3 cut(s) | 179, 306, 315 |
| SspMI | CTAG | 1 cut(s) | 407 |
| TaaI | ACNGT | 2 cut(s) | 226, 273 |
| TasI | AATT | 3 cut(s) | 179, 306, 315 |
| TatI | WGTACW | 2 cut(s) | 235, 443 |
| TfiI | GAWTC | 3 cut(s) | 41, 47, 422 |
| Tru1I | TTAA | 1 cut(s) | 552 |
| Tru9I | TTAA | 1 cut(s) | 552 |
| TscAI | CASTG | 1 cut(s) | 457 |
| TseI | GCWGC | 2 cut(s) | 296, 490 |
| TspDTI | ATGAA | 2 cut(s) | 182, 280 |
| TspRI | CASTG | 1 cut(s) | 457 |
| XbaI | TCTAGA | 1 cut(s) | 406 |
| XspI | CTAG | 1 cut(s) | 407 |
| ZrmI | AGTACT | 1 cut(s) | 445 |