Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0007554

Physical Location & Seq

Genomic Coordinates Reverse (-)

58526947 .. 58530896

Gene Structure 3950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0426400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2067 bp

ATGGCAGCCGAAGGTGAGACGAGCTCATACACACTGCGCAATAGAGAGTTTCTCCTGGAAATTGAGGCTAAAGTTCGAGAATGGTGGGAAAACAAGAAAGTTTTCAGTGCTGAATGTGAAAAGCCTGGGGACAAATTCTTTGGAAAATTCCCCTTTGATAGCTTTATGGGAAATCCATTCTCACTCTCCAAGCTAGACCAGTCTGCATATCTACCAGCTTTTCCTGTTGATGTCATGCGATTTGCTTTGGCGTATGTTTGTGATGGTACTGTTGATGAGGCGAAAATCAACTTTCTACAGAGCATTGCAGAATCTGTATTTGATACTGCAACTACTGCCATCCTAAAATTCACTGAAGAGATATCATGGCATGAAGAATTTTTGGCTGCAGATTTTGATTCTTGTTTGAGATGTGGTCCCCCTTCTACTTTCGCAGACAAGGTGTTTGCCAATGAGCTAAACATTGCTTTGAACAGGACCAAGCAGCAATACGAGGCTGACCAGTTTCGAGAAGCCCTGAATTCTATTTTTGAGCTTCAAGATGCCAGAAATCGGTACAAGAGTTCATGTGGTGGTACAAATGCAATGAACCGTGACTTAGTGTGGCGTTTTATGGATGTGCAGACATGTCTTATAACTCCAATCTGTCCACACTATGCGGAATATGTCTGGAGGGATCTTTTGTACAAGATAGACTTTGTGGTGAATGCAGACTGGCCTGTGGCTGATGCTTCAGATGATTCAACCCTCCAGAGTGCCAATAAGTATTTGAAAGACTTAATTGATTCAATGAAGAAGCAGATTGAAATTGAGAGAAATAAGAAGGGTACTGCTCCAGCTACATCTAGTTTGACAGAAGAAAGCCAAAACTTAGAAGCTCTTATATACGTTAATGAGGCATGTGATACTCTTACTTTTGCTACAGAGGGATTGCATACAGATTATGGACAAAACAAAGATGAGTTGAAGCAGAATGAGGGGGTTAAATTTGGGGCTCAAGCCTTAGACTTGAAGCTGCCATTTAGAGAGATTAGAGTGCTTCTACAGAATTTGGACTTTATTAAGAGGGAAGTTGGTCTTGACAAGGTGCAAATTTTATCAGCTACCAACCCTGATGATCTTGCTAAAGCTGGTTCTCCTGTTAAAATAATAGAAGCTGAATCTTCCTCACCTGGAAATCCAGCTATTCTCTTCTTGACATGTCCAAAAAGTGATTGTGGATCGTTTGGTACTTCTAAGACTACACCAATAATGGCCGCTCTATCCTCATCTGGTTGTGCGCGAACGCACATCAACCGTTTAACCAAGTTCATGTCGAAGCCAAAGTGTAATGATGAGAAAAGTCGGGGTCCAGAATGGACTGATGAGCAAAGGGAAGAAAAACATCTTGCATGGGAAACATCTGACCACCATGATACATCCACTATAGATGAGAAGTCTCGAAATAATCCTGCTTCCTTGTATCTCCCTCCCTCTAAGCTACTCTTCCAGAGTACCTTTGATGAGGCATTGGATACTGCTTGTAATCAAGACAAATGGCTCCTGGTGAACATGCAATGTGTGGATAATTTCAGCTCACATATGCATAATCAACACATCTGGGCTGAAGAAGCTGTCTCTGAGATCATTAGTACCAATTTTATCTTTTGGCACGAGTATTTTGATACACCTGAAGGTAAGATGGTTGCCAGAAAGTACTGGTTGGACTCAAGAACCATAGTACTCCTCATTGACCCCATGACTGGTGAAGCAATGTGTTCATGGAATGGAATGGTTCATCGGAATGATTTTGTGGAGGATCTAGTACCATACTTGGAGAGAAGCCCCAAGAATAATTTCGTAACTAAAGAAGAAGAGAAGGAACTACTCGCATTGGCAGCTTCCATGGAAAGCATGGAGTCGGAGACAAGTAGTGGAAGTACGTCCAAAGAGGATCTAGTACCATTCTGGAATAGTAGCCCGTGGAGTACTTCTCCAACTCAGGAAGACGAGGAATTGGCAGTTTTCACGGAAAGCATGAAGTTGGAAACAAGTAGTCCAAGTAGTTCCAAAGCAAAAGTCGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005681 GO:0005684 GO:0005686 GO:0005689 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016604 GO:0016607 GO:0030532 GO:0031974 GO:0031981 GO:0032991 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0070013 GO:0071011 GO:0071013 GO:0071704 GO:0090304 GO:0097525 GO:0120114 GO:1901360 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

DUF382 PSP

Protein Analysis

688

Amino Acids

77.86

Weight (kDa)

4.78

Isoelectric Point (pI)

51.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Anticodon_1	PF08264	146 - 275	1.2e-13	Anticodon-binding domain of tRNA ligase
Thioredoxin_7	PF13899	497 - 561	9.3e-08	Thioredoxin-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0007554)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr5g0006921 RchiOBHm_Chr5g0006931 RchiOBHm_Chr5g0007041 RchiOBHm_Chr5g0007191 RchiOBHm_Chr5g0007351
rosa_laevigata	RLG00000031441 RLG00000031449 RLG00000031452
rosa_roxburghii	Rroxscaffold_1G00069130
rosa_rugosa	Rorug04G0425600 Rorug04G0425900 Rorug04G0426200 Rorug04G0426300 Rorug04G0426400
rosa_samantha	Rh5AG053200 Rh5AG053500 Rh5AG053800 Rh5AG054700 Rh5CG060800 Rh5CG061100 Rh5CG061200 Rh5CG061400
rosa_wichuraiana	Rw5G005120 Rw5G005160 Rw5G005530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	635
Acc16I	TGCGCA	1 cut(s)	38
AccBSI	CCGCTC	1 cut(s)	1259
AccI	GTMKAC	1 cut(s)	2061
AccII	CGCG	1 cut(s)	1282
AciI	CCGC	2 cut(s)	659, 1257
AclWI	GGATC	4 cut(s)	684, 1228, 1806, 1941
AcoI	YGGCCR	1 cut(s)	1254
AcsI	RAATTY	8 cut(s)	134, 146, 347, 377, 520, 986, 1048, 1092
AcuI	CTGAAG	4 cut(s)	375, 717, 1626, 1692
AfiI	CCNNNNNNNGG	2 cut(s)	552, 1742
AflIII	ACRYGT	2 cut(s)	626, 1199
AgsI	TTSAA	8 cut(s)	472, 539, 744, 772, 789, 806, 967, 1012
AjnI	CCWGG	4 cut(s)	54, 124, 1171, 1542
AjuI	GAANNNNNNNTTGG	2 cut(s)	1820, 1852
Alw21I	GWGCWC	1 cut(s)	26
Alw26I	GTCTC	4 cut(s)	11, 1443, 1621, 1898
AlwI	GGATC	4 cut(s)	684, 1228, 1806, 1941
AlwNI	CAGNNNCTG	1 cut(s)	314
AoxI	GGCC	2 cut(s)	716, 1254
ApeKI	GCWGC	5 cut(s)	5, 386, 484, 1015, 1877
ApoI	RAATTY	8 cut(s)	134, 146, 347, 377, 520, 986, 1048, 1092
ArsI	GACNNNNNNTTYG	5 cut(s)	122, 154, 428, 460, 2043
Asp700I	GAANNNNTTC	2 cut(s)	101, 1835
AspLEI	GCGC	2 cut(s)	39, 1282
AspS9I	GGNCC	3 cut(s)	416, 477, 1349
AsuHPI	GGTGA	5 cut(s)	26, 715, 1161, 1558, 1757
AvaII	GGWCC	3 cut(s)	416, 477, 1349
BaeI	ACNNNNGTAYC	2 cut(s)	547, 580
BanII	GRGCYC	2 cut(s)	26, 997
BauI	CACGAG	1 cut(s)	1652
BbsI	GAAGAC	1 cut(s)	1992
Bbv12I	GWGCWC	1 cut(s)	26
BbvI	GCAGC	5 cut(s)	17, 373, 496, 1002, 1889
BccI	CCATC	3 cut(s)	257, 347, 1675
BciT130I	CCWGG	4 cut(s)	56, 126, 1173, 1544
BciVI	GTATCC	1 cut(s)	1507
BcoDI	GTCTC	4 cut(s)	11, 1443, 1621, 1898
BfaI	CTAG	5 cut(s)	194, 846, 1802, 1937, 2065
BfmI	CTRYAG	5 cut(s)	296, 387, 921, 1043, 1425
BfuI	GTATCC	1 cut(s)	1507
BisI	GCNGC	6 cut(s)	6, 387, 485, 1016, 1257, 1878
BlsI	GCNGC	6 cut(s)	7, 388, 486, 1017, 1258, 1879
BmcAI	AGTACT	3 cut(s)	1697, 1722, 1969
Bme1390I	CCNGG	4 cut(s)	56, 126, 1173, 1544
Bme18I	GGWCC	3 cut(s)	416, 477, 1349
BmgT120I	GGNCC	3 cut(s)	416, 477, 1349
BmiI	GGNNCC	3 cut(s)	418, 1350, 1541
BmrFI	CCNGG	4 cut(s)	56, 126, 1173, 1544
BmsI	GCATC	2 cut(s)	532, 718
BpiI	GAAGAC	1 cut(s)	1992
BplI	GAGNNNNNCTC	6 cut(s)	8, 40, 36, 68, 1957, 1989
BpmI	CTGGAG	3 cut(s)	691, 734, 819
BpuEI	CTTGAG	2 cut(s)	981, 1693
BsaJI	CCNNGG	3 cut(s)	125, 1884, 1961
Bsc4I	CCNNNNNNNGG	2 cut(s)	552, 1742
Bse1I	ACTGG	5 cut(s)	199, 502, 719, 1703, 1747
Bse3DI	GCAATG	5 cut(s)	303, 462, 591, 1562, 1758
BseBI	CCWGG	4 cut(s)	56, 126, 1173, 1544
BseDI	CCNNGG	3 cut(s)	125, 1884, 1961
BseGI	GGATG	3 cut(s)	339, 622, 1418
BseLI	CCNNNNNNNGG	2 cut(s)	552, 1742
BseMI	GCAATG	5 cut(s)	303, 462, 591, 1562, 1758
BseMII	CTCAG	2 cut(s)	1611, 1994
BseNI	ACTGG	5 cut(s)	199, 502, 719, 1703, 1747
BseRI	GAGGAG	1 cut(s)	1715
BseXI	GCAGC	5 cut(s)	17, 373, 496, 1002, 1889
BsgI	GTGCAG	1 cut(s)	641
Bsh1236I	CGCG	1 cut(s)	1282
BshFI	GGCC	2 cut(s)	718, 1256
BsiHKAI	GWGCWC	1 cut(s)	26
BslFI	GGGAC	2 cut(s)	143, 402
BslI	CCNNNNNNNGG	2 cut(s)	552, 1742
BsmAI	GTCTC	4 cut(s)	11, 1443, 1621, 1898
BsmBI	CGTCTC	1 cut(s)	11
BsmFI	GGGAC	2 cut(s)	143, 402
BsmI	GAATGC	1 cut(s)	712
BsnI	GGCC	2 cut(s)	718, 1256
Bsp1286I	GDGCHC	2 cut(s)	26, 997
Bsp1407I	TGTACA	1 cut(s)	684
Bsp143I	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
Bsp19I	CCATGG	1 cut(s)	1884
BspACI	CCGC	2 cut(s)	659, 1257
BspANI	GGCC	2 cut(s)	718, 1256
BspCNI	CTCAG	2 cut(s)	1612, 1993
BspFNI	CGCG	1 cut(s)	1282
BspLI	GGNNCC	3 cut(s)	418, 1350, 1541
BspMAI	CTGCAG	1 cut(s)	391
BspPI	GGATC	4 cut(s)	684, 1228, 1806, 1941
BsrBI	CCGCTC	1 cut(s)	1259
BsrDI	GCAATG	5 cut(s)	303, 462, 591, 1562, 1758
BsrGI	TGTACA	1 cut(s)	684
BsrI	ACTGG	5 cut(s)	199, 502, 719, 1703, 1747
BssECI	CCNNGG	3 cut(s)	125, 1884, 1961
BssMI	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
BssSI	CACGAG	1 cut(s)	1652
BssT1I	CCWWGG	1 cut(s)	1884
Bst2BI	CACGAG	1 cut(s)	1652
Bst2UI	CCWGG	4 cut(s)	56, 126, 1173, 1544
Bst4CI	ACNGT	3 cut(s)	271, 593, 1298
Bst6I	CTCTTC	4 cut(s)	351, 1196, 1490, 1848
BstAPI	GCANNNNNTGC	1 cut(s)	335
BstAUI	TGTACA	1 cut(s)	684
BstDEI	CTNAG	7 cut(s)	598, 871, 1003, 1236, 1476, 1620, 1980
BstDSI	CCRYGG	2 cut(s)	1884, 1961
BstF5I	GGATG	3 cut(s)	339, 622, 1418
BstFNI	CGCG	1 cut(s)	1282
BstHHI	GCGC	2 cut(s)	39, 1282
BstKTI	GATC	6 cut(s)	679, 1120, 1223, 1626, 1801, 1936
BstMAI	GTCTC	4 cut(s)	11, 1443, 1621, 1898
BstMBI	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
BstMWI	GCNNNNNNNGC	3 cut(s)	335, 1610, 1877
BstNI	CCWGG	4 cut(s)	56, 126, 1173, 1544
BstNSI	RCATGY	4 cut(s)	630, 903, 1203, 1555
BstSCI	CCNGG	4 cut(s)	54, 124, 1171, 1542
BstSFI	CTRYAG	5 cut(s)	296, 387, 921, 1043, 1425
BstUI	CGCG	1 cut(s)	1282
BstV1I	GCAGC	5 cut(s)	17, 373, 496, 1002, 1889
BstV2I	GAAGAC	1 cut(s)	1992
BstX2I	RGATCY	3 cut(s)	676, 1798, 1933
BstYI	RGATCY	3 cut(s)	676, 1798, 1933
BsuI	GTATCC	1 cut(s)	1507
BsuRI	GGCC	2 cut(s)	718, 1256
BtgI	CCRYGG	2 cut(s)	1884, 1961
BtsCI	GGATG	3 cut(s)	339, 622, 1418
BtsI	GCAGTG	1 cut(s)	32
BtsIMutI	CAGTG	3 cut(s)	32, 112, 351
CaiI	CAGNNNCTG	1 cut(s)	314
CfoI	GCGC	2 cut(s)	39, 1282
Cfr13I	GGNCC	3 cut(s)	416, 477, 1349
DdeI	CTNAG	7 cut(s)	598, 871, 1003, 1236, 1476, 1620, 1980
DpnI	GATC	6 cut(s)	678, 1119, 1222, 1625, 1800, 1935
DpnII	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
EaeI	YGGCCR	1 cut(s)	1254
Eam1104I	CTCTTC	4 cut(s)	351, 1196, 1490, 1848
EarI	CTCTTC	4 cut(s)	351, 1196, 1490, 1848
Ecl136II	GAGCTC	1 cut(s)	24
Eco130I	CCWWGG	1 cut(s)	1884
Eco24I	GRGCYC	2 cut(s)	26, 997
Eco32I	GATATC	1 cut(s)	363
Eco47I	GGWCC	3 cut(s)	416, 477, 1349
Eco53kI	GAGCTC	1 cut(s)	24
Eco57I	CTGAAG	4 cut(s)	375, 717, 1626, 1692
EcoICRI	GAGCTC	1 cut(s)	24
EcoRI	GAATTC	1 cut(s)	520
EcoRII	CCWGG	4 cut(s)	54, 124, 1171, 1542
EcoRV	GATATC	1 cut(s)	363
EcoT14I	CCWWGG	1 cut(s)	1884
EcoT22I	ATGCAT	1 cut(s)	1587
EcoT38I	GRGCYC	2 cut(s)	26, 997
ErhI	CCWWGG	1 cut(s)	1884
Esp3I	CGTCTC	1 cut(s)	11
FalI	AAGNNNNNCTT	6 cut(s)	680, 712, 1062, 1094, 1469, 1501
FaqI	GGGAC	2 cut(s)	143, 402
FauNDI	CATATG	1 cut(s)	1581
FblI	GTMKAC	1 cut(s)	2061
Fnu4HI	GCNGC	6 cut(s)	6, 387, 485, 1016, 1257, 1878
FokI	GGATG	3 cut(s)	326, 629, 1405
FriOI	GRGCYC	2 cut(s)	26, 997
Fsp4HI	GCNGC	6 cut(s)	6, 387, 485, 1016, 1257, 1878
FspBI	CTAG	5 cut(s)	194, 846, 1802, 1937, 2065
FspI	TGCGCA	1 cut(s)	38
GlaI	GCGC	2 cut(s)	38, 1281
GluI	GCNGC	6 cut(s)	6, 387, 485, 1016, 1257, 1878
GsuI	CTGGAG	3 cut(s)	691, 734, 819
HaeIII	GGCC	2 cut(s)	718, 1256
HhaI	GCGC	2 cut(s)	39, 1282
Hin6I	GCGC	2 cut(s)	37, 1280
HinP1I	GCGC	2 cut(s)	37, 1280
HincII	GTYRAC	1 cut(s)	2062
HindII	GTYRAC	1 cut(s)	2062
HinfI	GANTC	7 cut(s)	311, 398, 740, 785, 1160, 1706, 1898
HphI	GGTGA	5 cut(s)	26, 715, 1161, 1558, 1757
Hpy166II	GTNNAC	3 cut(s)	650, 1549, 2062
Hpy188I	TCNGA	5 cut(s)	736, 1405, 1621, 1782, 1903
Hpy8I	GTNNAC	3 cut(s)	650, 1549, 2062
HpyAV	CCTTC	5 cut(s)	5, 432, 817, 1667, 1852
HpyCH4III	ACNGT	3 cut(s)	271, 593, 1298
HpyCH4IV	ACGT	2 cut(s)	888, 1922
HpyF10VI	GCNNNNNNNGC	3 cut(s)	335, 1610, 1877
HpyF3I	CTNAG	7 cut(s)	598, 871, 1003, 1236, 1476, 1620, 1980
HpySE526I	ACGT	2 cut(s)	888, 1922
HspAI	GCGC	2 cut(s)	37, 1280
Kzo9I	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
LmnI	GCTCC	2 cut(s)	838, 1545
Lsp1109I	GCAGC	5 cut(s)	17, 373, 496, 1002, 1889
LweI	GCATC	2 cut(s)	532, 718
MaeI	CTAG	5 cut(s)	194, 846, 1802, 1937, 2065
MaeII	ACGT	2 cut(s)	888, 1922
MaeIII	GTNAC	2 cut(s)	593, 1840
MalI	GATC	6 cut(s)	678, 1119, 1222, 1625, 1800, 1935
MbiI	CCGCTC	1 cut(s)	1259
MboI	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
MflI	RGATCY	3 cut(s)	676, 1798, 1933
MhlI	GDGCHC	2 cut(s)	26, 997
MlyI	GAGTC	2 cut(s)	1700, 1907
MmeI	TCCRAC	4 cut(s)	1683, 1881, 2000, 2004
Mph1103I	ATGCAT	1 cut(s)	1587
MroXI	GAANNNNTTC	2 cut(s)	101, 1835
MseI	TTAA	6 cut(s)	779, 891, 984, 1062, 1143, 1301
MslI	CAYNNNNRTG	1 cut(s)	1782
MspR9I	CCNGG	4 cut(s)	56, 126, 1173, 1544
Mva1269I	GAATGC	1 cut(s)	712
MvaI	CCWGG	4 cut(s)	56, 126, 1173, 1544
MvnI	CGCG	1 cut(s)	1282
MwoI	GCNNNNNNNGC	3 cut(s)	335, 1610, 1877
NcoI	CCATGG	1 cut(s)	1884
NdeI	CATATG	1 cut(s)	1581
NdeII	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
NlaIV	GGNNCC	3 cut(s)	418, 1350, 1541
NmuCI	GTSAC	1 cut(s)	593
NsbI	TGCGCA	1 cut(s)	38
NsiI	ATGCAT	1 cut(s)	1587
NspI	RCATGY	4 cut(s)	630, 903, 1203, 1555
PciI	ACATGT	2 cut(s)	626, 1199
PctI	GAATGC	1 cut(s)	712
PdmI	GAANNNNTTC	2 cut(s)	101, 1835
PfeI	GAWTC	5 cut(s)	311, 398, 740, 785, 1160
PfoI	TCCNGGA	1 cut(s)	54
PkrI	GCNGC	6 cut(s)	7, 388, 486, 1017, 1258, 1879
PleI	GAGTC	2 cut(s)	1700, 1906
PpsI	GAGTC	2 cut(s)	1700, 1906
PscI	ACATGT	2 cut(s)	626, 1199
PsiI	TTATAA	1 cut(s)	635
Psp124BI	GAGCTC	1 cut(s)	26
Psp6I	CCWGG	4 cut(s)	54, 124, 1171, 1542
PspGI	CCWGG	4 cut(s)	54, 124, 1171, 1542
PspN4I	GGNNCC	3 cut(s)	418, 1350, 1541
PspPI	GGNCC	3 cut(s)	416, 477, 1349
PstI	CTGCAG	1 cut(s)	391
PstNI	CAGNNNCTG	1 cut(s)	314
PsuI	RGATCY	3 cut(s)	676, 1798, 1933
RseI	CAYNNNNRTG	1 cut(s)	1782
SacI	GAGCTC	1 cut(s)	26
SalI	GTCGAC	1 cut(s)	2060
SaqAI	TTAA	6 cut(s)	779, 891, 984, 1062, 1143, 1301
SatI	GCNGC	6 cut(s)	6, 387, 485, 1016, 1257, 1878
Sau3AI	GATC	6 cut(s)	676, 1117, 1220, 1623, 1798, 1933
Sau96I	GGNCC	3 cut(s)	416, 477, 1349
ScaI	AGTACT	3 cut(s)	1697, 1722, 1969
SchI	GAGTC	2 cut(s)	1700, 1907
ScrFI	CCNGG	4 cut(s)	56, 126, 1173, 1544
SduI	GDGCHC	2 cut(s)	26, 997
SfaNI	GCATC	2 cut(s)	532, 718
SfcI	CTRYAG	5 cut(s)	296, 387, 921, 1043, 1425
SinI	GGWCC	3 cut(s)	416, 477, 1349
SmiMI	CAYNNNNRTG	1 cut(s)	1782
SmlI	CTYRAG	2 cut(s)	996, 1708
SmoI	CTYRAG	2 cut(s)	996, 1708
SsiI	CCGC	2 cut(s)	659, 1257
SspMI	CTAG	5 cut(s)	194, 846, 1802, 1937, 2065
SstI	GAGCTC	1 cut(s)	26
StyD4I	CCNGG	4 cut(s)	54, 124, 1171, 1542
StyI	CCWWGG	1 cut(s)	1884
TaaI	ACNGT	3 cut(s)	271, 593, 1298
TaiI	ACGT	2 cut(s)	891, 1925
TaqI	TCGA	5 cut(s)	76, 508, 1316, 1441, 2061
TatI	WGTACW	4 cut(s)	684, 1695, 1720, 1967
TauI	GCSGC	1 cut(s)	1259
TfiI	GAWTC	5 cut(s)	311, 398, 740, 785, 1160
Tru1I	TTAA	6 cut(s)	779, 891, 984, 1062, 1143, 1301
Tru9I	TTAA	6 cut(s)	779, 891, 984, 1062, 1143, 1301
TscAI	CASTG	3 cut(s)	39, 112, 358
TseFI	GTSAC	1 cut(s)	593
TseI	GCWGC	5 cut(s)	5, 386, 484, 1015, 1877
Tsp45I	GTSAC	1 cut(s)	593
TspDTI	ATGAA	8 cut(s)	387, 555, 602, 806, 1300, 1749, 1766, 2033
TspGWI	ACGGA	1 cut(s)	2024
TspRI	CASTG	3 cut(s)	39, 112, 358
VpaK11BI	GGWCC	3 cut(s)	416, 477, 1349
XapI	RAATTY	8 cut(s)	134, 146, 347, 377, 520, 986, 1048, 1092
XceI	RCATGY	4 cut(s)	630, 903, 1203, 1555
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1891
XmiI	GTMKAC	1 cut(s)	2061
XmnI	GAANNNNTTC	2 cut(s)	101, 1835
XspI	CTAG	5 cut(s)	194, 846, 1802, 1937, 2065
ZrmI	AGTACT	3 cut(s)	1697, 1722, 1969
Zsp2I	ATGCAT	1 cut(s)	1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.