Splicing factor 3B subunit
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| Species | Orthologous Gene IDs |
|---|---|
| rosa_chinensis | RchiOBHm_Chr5g0006921 RchiOBHm_Chr5g0006931 RchiOBHm_Chr5g0007041 RchiOBHm_Chr5g0007191 RchiOBHm_Chr5g0007351 |
| rosa_laevigata | RLG00000031441 RLG00000031449 RLG00000031452 |
| rosa_roxburghii | Rroxscaffold_1G00069130 |
| rosa_rugosa | Rorug04G0425600 Rorug04G0425900 Rorug04G0426200 Rorug04G0426300 Rorug04G0426400 |
| rosa_samantha | Rh5AG053200 Rh5AG053500 Rh5AG053800 Rh5AG054700 Rh5CG060800 Rh5CG061100 Rh5CG061200 Rh5CG061400 |
| rosa_wichuraiana | Rw5G005120 Rw5G005160 Rw5G005530 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 137, 184, 212 |
| AclWI | GGATC | 1 cut(s) | 95 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 205 |
| Alw21I | GWGCWC | 1 cut(s) | 9 |
| Alw26I | GTCTC | 2 cut(s) | 145, 192 |
| AlwI | GGATC | 1 cut(s) | 95 |
| ApeKI | GCWGC | 2 cut(s) | 181, 209 |
| AsuC2I | CCSGG | 1 cut(s) | 167 |
| Bbv12I | GWGCWC | 1 cut(s) | 9 |
| BbvI | GCAGC | 1 cut(s) | 193 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 170, 204 |
| BcnI | CCSGG | 1 cut(s) | 167 |
| BcoDI | GTCTC | 2 cut(s) | 145, 192 |
| BisI | GCNGC | 3 cut(s) | 137, 182, 210 |
| BlsI | GCNGC | 3 cut(s) | 138, 183, 211 |
| Bme1390I | CCNGG | 1 cut(s) | 167 |
| BmiI | GGNNCC | 1 cut(s) | 135 |
| BmrFI | CCNGG | 1 cut(s) | 167 |
| BmsI | GCATC | 1 cut(s) | 30 |
| BpuMI | CCSGG | 1 cut(s) | 167 |
| BsaI | GGTCTC | 1 cut(s) | 192 |
| BsaJI | CCNNGG | 1 cut(s) | 199 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 205 |
| Bse118I | RCCGGY | 1 cut(s) | 139 |
| BseDI | CCNNGG | 1 cut(s) | 199 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 205 |
| BseXI | GCAGC | 1 cut(s) | 193 |
| BsiHKAI | GWGCWC | 1 cut(s) | 9 |
| BsiSI | CCGG | 2 cut(s) | 140, 166 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 205 |
| BsmAI | GTCTC | 2 cut(s) | 145, 192 |
| BsmBI | CGTCTC | 1 cut(s) | 145 |
| Bso31I | GGTCTC | 1 cut(s) | 192 |
| Bsp1286I | GDGCHC | 1 cut(s) | 9 |
| Bsp143I | GATC | 1 cut(s) | 87 |
| BspACI | CCGC | 3 cut(s) | 137, 184, 212 |
| BspHI | TCATGA | 1 cut(s) | 81 |
| BspLI | GGNNCC | 1 cut(s) | 135 |
| BspPI | GGATC | 1 cut(s) | 95 |
| BspTNI | GGTCTC | 1 cut(s) | 192 |
| BsrFI | RCCGGY | 1 cut(s) | 139 |
| BssAI | RCCGGY | 1 cut(s) | 139 |
| BssECI | CCNNGG | 1 cut(s) | 199 |
| BssMI | GATC | 1 cut(s) | 87 |
| BstC8I | GCNNGC | 1 cut(s) | 141 |
| BstKTI | GATC | 1 cut(s) | 90 |
| BstMAI | GTCTC | 2 cut(s) | 145, 192 |
| BstMBI | GATC | 1 cut(s) | 87 |
| BstSCI | CCNGG | 1 cut(s) | 165 |
| BstV1I | GCAGC | 1 cut(s) | 193 |
| Cac8I | GCNNGC | 1 cut(s) | 141 |
| CciI | TCATGA | 1 cut(s) | 81 |
| Cfr10I | RCCGGY | 1 cut(s) | 139 |
| CviAII | CATG | 2 cut(s) | 34, 82 |
| CviJI | RGCY | 1 cut(s) | 136 |
| CviKI_1 | RGCY | 1 cut(s) | 136 |
| DpnI | GATC | 1 cut(s) | 89 |
| DpnII | GATC | 1 cut(s) | 87 |
| Eco31I | GGTCTC | 1 cut(s) | 192 |
| Esp3I | CGTCTC | 1 cut(s) | 145 |
| FaeI | CATG | 2 cut(s) | 37, 85 |
| FaiI | YATR | 5 cut(s) | 35, 72, 74, 83, 131 |
| FatI | CATG | 2 cut(s) | 33, 81 |
| FauNDI | CATATG | 1 cut(s) | 72 |
| Fnu4HI | GCNGC | 3 cut(s) | 137, 182, 210 |
| Fsp4HI | GCNGC | 3 cut(s) | 137, 182, 210 |
| GluI | GCNGC | 3 cut(s) | 137, 182, 210 |
| HapII | CCGG | 2 cut(s) | 140, 166 |
| Hin1II | CATG | 2 cut(s) | 37, 85 |
| HpaII | CCGG | 2 cut(s) | 140, 166 |
| Hpy188I | TCNGA | 1 cut(s) | 203 |
| Hpy188III | TCNNGA | 2 cut(s) | 82, 103 |
| HpyAV | CCTTC | 2 cut(s) | 32, 129 |
| HpyCH4IV | ACGT | 2 cut(s) | 57, 154 |
| HpyCH4V | TGCA | 1 cut(s) | 76 |
| HpySE526I | ACGT | 2 cut(s) | 57, 154 |
| Hsp92II | CATG | 2 cut(s) | 37, 85 |
| KroI | GCCGGC | 1 cut(s) | 139 |
| KroNI | GCCGGC | 1 cut(s) | 141 |
| Kzo9I | GATC | 1 cut(s) | 87 |
| LmnI | GCTCC | 2 cut(s) | 4, 133 |
| LpnPI | CCDG | 4 cut(s) | 29, 78, 153, 179 |
| Lsp1109I | GCAGC | 1 cut(s) | 193 |
| LweI | GCATC | 1 cut(s) | 30 |
| MaeII | ACGT | 2 cut(s) | 57, 154 |
| MaeIII | GTNAC | 1 cut(s) | 50 |
| MalI | GATC | 1 cut(s) | 89 |
| MboI | GATC | 1 cut(s) | 87 |
| MhlI | GDGCHC | 1 cut(s) | 9 |
| MnlI | CCTC | 3 cut(s) | 40, 78, 209 |
| MroNI | GCCGGC | 1 cut(s) | 139 |
| MseI | TTAA | 2 cut(s) | 174, 217 |
| MspA1I | CMGCKG | 2 cut(s) | 184, 212 |
| MspI | CCGG | 2 cut(s) | 140, 166 |
| MspR9I | CCNGG | 1 cut(s) | 167 |
| NaeI | GCCGGC | 1 cut(s) | 141 |
| NciI | CCSGG | 1 cut(s) | 167 |
| NdeI | CATATG | 1 cut(s) | 72 |
| NdeII | GATC | 1 cut(s) | 87 |
| NgoMIV | GCCGGC | 1 cut(s) | 139 |
| NlaIII | CATG | 2 cut(s) | 37, 85 |
| NlaIV | GGNNCC | 1 cut(s) | 135 |
| PagI | TCATGA | 1 cut(s) | 81 |
| PdiI | GCCGGC | 1 cut(s) | 141 |
| PfoI | TCCNGGA | 1 cut(s) | 165 |
| PkrI | GCNGC | 3 cut(s) | 138, 183, 211 |
| PspN4I | GGNNCC | 1 cut(s) | 135 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 51, 83 |
| SaqAI | TTAA | 2 cut(s) | 174, 217 |
| SatI | GCNGC | 3 cut(s) | 137, 182, 210 |
| Sau3AI | GATC | 1 cut(s) | 87 |
| ScrFI | CCNGG | 1 cut(s) | 167 |
| SduI | GDGCHC | 1 cut(s) | 9 |
| SetI | ASST | 2 cut(s) | 60, 157 |
| SfaNI | GCATC | 1 cut(s) | 30 |
| SsiI | CCGC | 3 cut(s) | 137, 184, 212 |
| StyD4I | CCNGG | 1 cut(s) | 165 |
| TaiI | ACGT | 2 cut(s) | 60, 157 |
| TaqI | TCGA | 1 cut(s) | 102 |
| TauI | GCSGC | 1 cut(s) | 139 |
| Tru1I | TTAA | 2 cut(s) | 174, 217 |
| Tru9I | TTAA | 2 cut(s) | 174, 217 |
| TseI | GCWGC | 2 cut(s) | 181, 209 |
| TspDTI | ATGAA | 1 cut(s) | 59 |