RchiOBHm_Chr5g0031591

Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0001388
Physical Location & Seq
Reverse (-)
25269881 .. 25274709
4829 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ31084

Sequence Viewer

Length: 1749 bp
ATGTCCAGACTCCTCCTCCTACTCTCCCTCCTAATCCTCTGCGGCCACGTCCACGGCCGCTACAACCTCCCCGACCAATCGGATCTAATCTCCGATGGGGTCCGCCAATTCGGCACCTCCTCCTCATACTCATACTCACCGAACTTTCTCACTCTCCACCGCCCCTCCTTGAACGCCGACGACTCCACCTGCGACGAGACGTACGGCTTCTTGCCCTGCACCACCACCATCCTCGGTAACCTCTTCCTCATCATCGTCTATGGCGGCCTCATGTACTTGGCCGCCACCTACCTCTCCAATGGCAGCGAGCTCCTCCTTGAGATTCTCGGCCCCGGAATCATCGGAGGCCTCTTCCTCCCCATTCTCGGCGCTCTTCCCGACGCCATGCTCATTCTCGTATCCGGACTTTCTGGGAGTACAGAAACAGCTCAAGATCAGGTTTCTGTTGGAATGGGCTTGCTAGCTGGTTCGACTGTAATGCTCATAACAGTAGTATGGGGTTCATGTGTTTTTATTGGCAAGTGCGATATTGAGAATAATATTGCCGTAGATAACAAAGATACTAAAAAGTTGAGCTTAACAGGTTCTGGTGTCACTACTGATACCTTGACTAAATATTCTGCGATAATTATGGCTGTATCTGTCATCCCATTTATTGTTGTTCAACTACCACAGCTCCTCAGTTCCACCTATTTAAGGCAGTTGGCAGTTTTAATTGGACTAGTTCTTTCTCTTGCACTATTGATTTCCTACTGCATGTATCAGGTATTTCAGCCATGGATCCAGAGGAGACGCCTTGCTTATGCAAAGCACAAGCATGTTATATCAGGACTTCTAAAAGATCTAAAGAAGCGTGCATTGGGAAGGCTTCTTCACGATAATGGTGAACTCAATGAAGAAGTTGCAGAAAAGTTATTTGACACAATTGATATGAACAGAGATAATCATCTTTCACTCTCTGAGTTGAAAGCACTGATGGTTGGAATCCGGTTTGATGAAATAGAGTTGGATAAGGATGATGCTGCAGATAAAGTGATGAAAGATTTTGACACTTCTCATGATAGTCAGATATCGGTTCAGGAATTCAAAGATGGTATCAAAAAATGGCTTAATGAGGCAAAGCATGCAGGAAACTCCACTTCTTACTCTGGTAGTCGCACTGAGAAAATTTTAGATGACTTCCATGAGCAAACAAAGAAAGAGCATCAGCTTATTGTGAGGGGGGAAGAGCAAAGCGATGAGGTTGTCGAGGGTGTTGATAATCCCAAGAAAACCTCAATCAAAGCGGGGTTGATGTTGTTGGCTGGAACTCTGATTGCGGCTGCATTTGCTGATCCCCTGGTAGATGCTGTTGATAATTTCTCAGATGCCACAAGCATTCCAACTTTCTTCATTTCATTCATTGCACTACCTTTGGCTACTAATTCTAGTGAGGCTGTATCTGCGATAATCTTTGCCAGCCGTAAAAAGAAAAGGACTTCCTCGCTAACATTTTCTGAGTTGTATGGTGCAGTAACCATGAATAACGTCCTCTGCCTATCAGTATTTTTGGCCCTGGTTTATGTTAGGGGATTAACATGGGACTTCTCAGCTGAAGTCCTCATCATTGTTATCGTTTGCGTTGTGATGGGTGTTTTTGGCGGTTTACGCACCACCTTCCCTCTTTGGACAGCGTCCATCGCTTTCCTACTTTACCCGTTCTCCCTGGTACTGGTTTATGTTCTGGATTATATTTTTGGCTGGTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
EF-hand_7 Na_Ca_ex

Protein Analysis

582

Amino Acids

63.77

Weight (kDa)

5.3

Isoelectric Point (pI)

29.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_Ca_ex PF01699 81 - 258 2.3e-09 Sodium/calcium exchanger protein
EF-hand_7 PF13499 300 - 366 5.6e-10 EF-hand domain pair
Na_Ca_ex PF01699 431 - 573 1e-15 Sodium/calcium exchanger protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 197
Acc36I ACCTGC 1 cut(s) 197
AccB1I GGYRCC 1 cut(s) 113
AccIII TCCGGA 1 cut(s) 401
AciI CCGC 9 cut(s) 42, 58, 103, 160, 264, 282, 1286, 1319, 1641
AclWI GGATC 4 cut(s) 90, 775, 788, 1328
AcoI YGGCCR 3 cut(s) 43, 55, 279
AcsI RAATTY 2 cut(s) 1082, 1167
AcuI CTGAAG 1 cut(s) 1614
AcyI GRCGYC 2 cut(s) 381, 793
AfaI GTAC 4 cut(s) 203, 275, 418, 1710
AfiI CCNNNNNNNGG 3 cut(s) 365, 696, 1711
AgsI TTSAA 4 cut(s) 172, 665, 967, 1087
AhlI ACTAGT 1 cut(s) 721
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 3 cut(s) 1338, 1554, 1704
AjuI GAANNNNNNNTTGG 2 cut(s) 842, 874
AluBI AGCT 7 cut(s) 310, 428, 464, 576, 676, 1210, 1592
AluI AGCT 7 cut(s) 310, 428, 464, 576, 676, 1210, 1592
Alw21I GWGCWC 1 cut(s) 312
Alw26I GTCTC 2 cut(s) 191, 784
AlwI GGATC 4 cut(s) 90, 775, 788, 1328
AlwNI CAGNNNCTG 1 cut(s) 587
Aor13HI TCCGGA 1 cut(s) 401
AoxI GGCC 7 cut(s) 43, 55, 265, 279, 328, 346, 1551
ApeKI GCWGC 3 cut(s) 303, 1022, 1322
ApoI RAATTY 2 cut(s) 1082, 1167
AspLEI GCGC 1 cut(s) 371
AspS9I GGNCC 3 cut(s) 100, 329, 1552
AsuC2I CCSGG 1 cut(s) 333
AsuHPI GGTGA 2 cut(s) 129, 896
AsuNHI GCTAGC 1 cut(s) 460
AvaII GGWCC 1 cut(s) 100
BamHI GGATCC 1 cut(s) 780
BanI GGYRCC 1 cut(s) 113
BanII GRGCYC 1 cut(s) 312
Bbv12I GWGCWC 1 cut(s) 312
BbvI GCAGC 3 cut(s) 315, 1009, 1309
BccI CCATC 6 cut(s) 89, 236, 970, 1085, 1621, 1685
BceAI ACGGC 4 cut(s) 70, 220, 530, 1446
BcgI CGANNNNNNTGC 2 cut(s) 460, 494
BciT130I CCWGG 3 cut(s) 1340, 1556, 1706
BciVI GTATCC 1 cut(s) 409
BcnI CCSGG 1 cut(s) 333
BcoDI GTCTC 2 cut(s) 191, 784
BcuI ACTAGT 1 cut(s) 721
BfaI CTAG 3 cut(s) 461, 722, 1428
BfmI CTRYAG 1 cut(s) 1023
BfoI RGCGCY 1 cut(s) 372
BfuAI ACCTGC 1 cut(s) 197
BfuI GTATCC 1 cut(s) 409
BglI GCCNNNNNGGC 1 cut(s) 111
BglII AGATCT 1 cut(s) 841
BisI GCNGC 8 cut(s) 43, 58, 265, 282, 304, 1023, 1320, 1323
BlsI GCNGC 8 cut(s) 44, 59, 266, 283, 305, 1024, 1321, 1324
Bme1390I CCNGG 4 cut(s) 333, 1340, 1556, 1706
Bme18I GGWCC 1 cut(s) 100
BmgBI CACGTC 1 cut(s) 49
BmgT120I GGNCC 3 cut(s) 100, 329, 1552
BmiI GGNNCC 4 cut(s) 101, 115, 331, 782
BmrFI CCNGG 4 cut(s) 333, 1340, 1556, 1706
BmsI GCATC 4 cut(s) 1009, 1213, 1336, 1357
BmtI GCTAGC 1 cut(s) 464
BpuEI CTTGAG 2 cut(s) 338, 414
BpuMI CCSGG 1 cut(s) 333
BsaBI GATNNNNATC 1 cut(s) 945
BsaHI GRCGYC 2 cut(s) 381, 793
BsaJI CCNNGG 7 cut(s) 52, 232, 331, 776, 1338, 1554, 1704
BsaWI WCCGGW 2 cut(s) 401, 987
BsaXI ACNNNNNCTCC 9 cut(s) 12, 30, 42, 149, 179, 660, 690, 1685, 1715
Bsc4I CCNNNNNNNGG 3 cut(s) 365, 696, 1711
Bse1I ACTGG 1 cut(s) 1716
Bse3DI GCAATG 1 cut(s) 1401
Bse8I GATNNNNATC 1 cut(s) 945
BseAI TCCGGA 1 cut(s) 401
BseBI CCWGG 3 cut(s) 1340, 1556, 1706
BseDI CCNNGG 7 cut(s) 52, 232, 331, 776, 1338, 1554, 1704
BseGI GGATG 3 cut(s) 228, 645, 1021
BseJI GATNNNNATC 1 cut(s) 945
BseLI CCNNNNNNNGG 3 cut(s) 365, 696, 1711
BseMI GCAATG 1 cut(s) 1401
BseMII CTCAG 6 cut(s) 694, 951, 1152, 1377, 1488, 1602
BseNI ACTGG 1 cut(s) 1716
BseRI GAGGAG 6 cut(s) 5, 109, 112, 302, 668, 802
BseX3I CGGCCG 1 cut(s) 55
BseXI GCAGC 3 cut(s) 315, 1009, 1309
BsgI GTGCAG 2 cut(s) 202, 1530
Bsh1285I CGRYCG 1 cut(s) 58
BshFI GGCC 7 cut(s) 45, 57, 267, 281, 330, 348, 1553
BshNI GGYRCC 1 cut(s) 113
BsiEI CGRYCG 1 cut(s) 58
BsiHKAI GWGCWC 1 cut(s) 312
BsiSI CCGG 3 cut(s) 333, 402, 988
BsiWI CGTACG 1 cut(s) 201
BslFI GGGAC 1 cut(s) 1595
BslI CCNNNNNNNGG 3 cut(s) 365, 696, 1711
BsmAI GTCTC 2 cut(s) 191, 784
BsmBI CGTCTC 2 cut(s) 191, 784
BsmFI GGGAC 1 cut(s) 1595
BsmI GAATGC 1 cut(s) 1377
BsnI GGCC 7 cut(s) 45, 57, 267, 281, 330, 348, 1553
Bsp1286I GDGCHC 1 cut(s) 312
Bsp13I TCCGGA 1 cut(s) 401
Bsp143I GATC 5 cut(s) 82, 433, 780, 841, 1333
Bsp19I CCATGG 1 cut(s) 776
BspACI CCGC 9 cut(s) 42, 58, 103, 160, 264, 282, 1286, 1319, 1641
BspANI GGCC 7 cut(s) 45, 57, 267, 281, 330, 348, 1553
BspCNI CTCAG 6 cut(s) 693, 952, 1153, 1376, 1489, 1601
BspEI TCCGGA 1 cut(s) 401
BspHI TCATGA 1 cut(s) 1057
BspLI GGNNCC 4 cut(s) 101, 115, 331, 782
BspMAI CTGCAG 1 cut(s) 1027
BspMI ACCTGC 1 cut(s) 197
BspOI GCTAGC 1 cut(s) 464
BspPI GGATC 4 cut(s) 90, 775, 788, 1328
BspQI GCTCTTC 2 cut(s) 378, 1221
BspT107I GGYRCC 1 cut(s) 113
BsrDI GCAATG 1 cut(s) 1401
BsrI ACTGG 1 cut(s) 1716
BssECI CCNNGG 7 cut(s) 52, 232, 331, 776, 1338, 1554, 1704
BssMI GATC 5 cut(s) 82, 433, 780, 841, 1333
BssNI GRCGYC 2 cut(s) 381, 793
BssT1I CCWWGG 1 cut(s) 776
Bst2UI CCWGG 3 cut(s) 1340, 1556, 1706
Bst4CI ACNGT 2 cut(s) 475, 490
Bst6I CTCTTC 4 cut(s) 248, 356, 378, 1221
BstACI GRCGYC 2 cut(s) 381, 793
BstAPI GCANNNNNTGC 1 cut(s) 1124
BstC8I GCNNGC 6 cut(s) 308, 458, 462, 855, 1125, 1459
BstDEI CTNAG 6 cut(s) 680, 960, 1161, 1363, 1497, 1588
BstDSI CCRYGG 2 cut(s) 52, 776
BstEII GGTNACC 1 cut(s) 236
BstENI CCTNNNNNAGG 1 cut(s) 694
BstF5I GGATG 3 cut(s) 228, 645, 1021
BstH2I RGCGCY 1 cut(s) 372
BstHHI GCGC 1 cut(s) 371
BstKTI GATC 5 cut(s) 85, 436, 783, 844, 1336
BstMAI GTCTC 2 cut(s) 191, 784
BstMBI GATC 5 cut(s) 82, 433, 780, 841, 1333
BstMCI CGRYCG 1 cut(s) 58
BstMWI GCNNNNNNNGC 6 cut(s) 111, 1124, 1328, 1442, 1647, 1679
BstNI CCWGG 3 cut(s) 1340, 1556, 1706
BstNSI RCATGY 3 cut(s) 760, 821, 1127
BstPI GGTNACC 1 cut(s) 236
BstSCI CCNGG 4 cut(s) 331, 1338, 1554, 1704
BstSFI CTRYAG 1 cut(s) 1023
BstV1I GCAGC 3 cut(s) 315, 1009, 1309
BstX2I RGATCY 3 cut(s) 82, 780, 841
BstYI RGATCY 3 cut(s) 82, 780, 841
BstZI CGGCCG 1 cut(s) 55
BsuI GTATCC 1 cut(s) 409
BsuRI GGCC 7 cut(s) 45, 57, 267, 281, 330, 348, 1553
BtgI CCRYGG 2 cut(s) 52, 776
BtgZI GCGATG 2 cut(s) 1251, 1663
BtrI CACGTC 1 cut(s) 49
BtsCI GGATG 3 cut(s) 228, 645, 1021
BtsIMutI CAGTG 2 cut(s) 971, 1158
BveI ACCTGC 1 cut(s) 197
Cac8I GCNNGC 6 cut(s) 308, 458, 462, 855, 1125, 1459
CaiI CAGNNNCTG 1 cut(s) 587
CciI TCATGA 1 cut(s) 1057
CfoI GCGC 1 cut(s) 371
Cfr13I GGNCC 3 cut(s) 100, 329, 1552
CseI GACGC 3 cut(s) 389, 801, 1662
Csp6I GTAC 4 cut(s) 202, 274, 417, 1709
CviQI GTAC 4 cut(s) 202, 274, 417, 1709
DdeI CTNAG 6 cut(s) 680, 960, 1161, 1363, 1497, 1588
DpnI GATC 5 cut(s) 84, 435, 782, 843, 1335
DpnII GATC 5 cut(s) 82, 433, 780, 841, 1333
EaeI YGGCCR 3 cut(s) 43, 55, 279
EagI CGGCCG 1 cut(s) 55
Eam1104I CTCTTC 4 cut(s) 248, 356, 378, 1221
EarI CTCTTC 4 cut(s) 248, 356, 378, 1221
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 310
EclXI CGGCCG 1 cut(s) 55
Eco130I CCWWGG 1 cut(s) 776
Eco147I AGGCCT 1 cut(s) 348
Eco24I GRGCYC 1 cut(s) 312
Eco32I GATATC 1 cut(s) 1071
Eco47I GGWCC 1 cut(s) 100
Eco52I CGGCCG 1 cut(s) 55
Eco53kI GAGCTC 1 cut(s) 310
Eco57I CTGAAG 1 cut(s) 1614
Eco91I GGTNACC 1 cut(s) 236
EcoICRI GAGCTC 1 cut(s) 310
EcoNI CCTNNNNNAGG 1 cut(s) 694
EcoO65I GGTNACC 1 cut(s) 236
EcoRI GAATTC 1 cut(s) 1082
EcoRII CCWGG 3 cut(s) 1338, 1554, 1704
EcoRV GATATC 1 cut(s) 1071
EcoT14I CCWWGG 1 cut(s) 776
EcoT38I GRGCYC 1 cut(s) 312
ErhI CCWWGG 1 cut(s) 776
Esp3I CGTCTC 2 cut(s) 191, 784
FalI AAGNNNNNCTT 2 cut(s) 560, 592
FaqI GGGAC 1 cut(s) 1595
FauI CCCGC 1 cut(s) 1279
Fnu4HI GCNGC 8 cut(s) 43, 58, 265, 282, 304, 1023, 1320, 1323
FokI GGATG 3 cut(s) 215, 632, 1028
FriOI GRGCYC 1 cut(s) 312
Fsp4HI GCNGC 8 cut(s) 43, 58, 265, 282, 304, 1023, 1320, 1323
FspBI CTAG 3 cut(s) 461, 722, 1428
GlaI GCGC 1 cut(s) 370
GluI GCNGC 8 cut(s) 43, 58, 265, 282, 304, 1023, 1320, 1323
HaeII RGCGCY 1 cut(s) 372
HaeIII GGCC 7 cut(s) 45, 57, 267, 281, 330, 348, 1553
HapII CCGG 3 cut(s) 333, 402, 988
HgaI GACGC 3 cut(s) 389, 801, 1662
HhaI GCGC 1 cut(s) 371
Hin1I GRCGYC 2 cut(s) 381, 793
Hin6I GCGC 1 cut(s) 369
HinP1I GCGC 1 cut(s) 369
HinfI GANTC 5 cut(s) 9, 182, 322, 336, 984
HpaII CCGG 3 cut(s) 333, 402, 988
HphI GGTGA 2 cut(s) 129, 896
Hpy166II GTNNAC 3 cut(s) 52, 887, 1646
Hpy188I TCNGA 8 cut(s) 82, 94, 344, 961, 1068, 1314, 1366, 1498
Hpy8I GTNNAC 3 cut(s) 52, 887, 1646
Hpy99I CGWCG 3 cut(s) 182, 197, 383
HpyAV CCTTC 2 cut(s) 858, 1666
HpyCH4III ACNGT 2 cut(s) 475, 490
HpyCH4IV ACGT 3 cut(s) 48, 200, 1527
HpyF10VI GCNNNNNNNGC 6 cut(s) 111, 1124, 1328, 1442, 1647, 1679
HpyF3I CTNAG 6 cut(s) 680, 960, 1161, 1363, 1497, 1588
HpySE526I ACGT 3 cut(s) 48, 200, 1527
Hsp92I GRCGYC 2 cut(s) 381, 793
HspAI GCGC 1 cut(s) 369
Kpn2I TCCGGA 1 cut(s) 401
Kzo9I GATC 5 cut(s) 82, 433, 780, 841, 1333
LguI GCTCTTC 2 cut(s) 378, 1221
LmnI GCTCC 2 cut(s) 315, 681
Lsp1109I GCAGC 3 cut(s) 315, 1009, 1309
LweI GCATC 4 cut(s) 1009, 1213, 1336, 1357
MaeI CTAG 3 cut(s) 461, 722, 1428
MaeII ACGT 3 cut(s) 48, 200, 1527
MaeIII GTNAC 3 cut(s) 236, 592, 1513
MalI GATC 5 cut(s) 84, 435, 782, 843, 1335
MboI GATC 5 cut(s) 82, 433, 780, 841, 1333
MboII GAAGA 7 cut(s) 235, 343, 365, 863, 908, 1238, 1381
MfeI CAATTG 1 cut(s) 924
MflI RGATCY 3 cut(s) 82, 780, 841
MhlI GDGCHC 1 cut(s) 312
MluCI AATT 8 cut(s) 107, 627, 714, 924, 1082, 1167, 1357, 1423
MlyI GAGTC 2 cut(s) 3, 176
MmeI TCCRAC 4 cut(s) 427, 961, 987, 1406
MroI TCCGGA 1 cut(s) 401
MseI TTAA 5 cut(s) 578, 695, 713, 1110, 1574
MslI CAYNNNNRTG 2 cut(s) 816, 879
MspA1I CMGCKG 1 cut(s) 1592
MspI CCGG 3 cut(s) 333, 402, 988
MspR9I CCNGG 4 cut(s) 333, 1340, 1556, 1706
MunI CAATTG 1 cut(s) 924
Mva1269I GAATGC 1 cut(s) 1377
MvaI CCWGG 3 cut(s) 1340, 1556, 1706
MwoI GCNNNNNNNGC 6 cut(s) 111, 1124, 1328, 1442, 1647, 1679
NciI CCSGG 1 cut(s) 333
NcoI CCATGG 1 cut(s) 776
NdeII GATC 5 cut(s) 82, 433, 780, 841, 1333
NheI GCTAGC 1 cut(s) 460
NlaIV GGNNCC 4 cut(s) 101, 115, 331, 782
NmeAIII GCCGAG 2 cut(s) 306, 345
NmuCI GTSAC 1 cut(s) 592
NspI RCATGY 3 cut(s) 760, 821, 1127
PaeI GCATGC 1 cut(s) 1127
PagI TCATGA 1 cut(s) 1057
PaqCI CACCTGC 1 cut(s) 197
PceI AGGCCT 1 cut(s) 348
PciSI GCTCTTC 2 cut(s) 378, 1221
PctI GAATGC 1 cut(s) 1377
PfeI GAWTC 3 cut(s) 322, 336, 984
Pfl23II CGTACG 1 cut(s) 201
PflFI GACNNNGTC 1 cut(s) 1672
PkrI GCNGC 8 cut(s) 44, 59, 266, 283, 305, 1024, 1321, 1324
PleI GAGTC 2 cut(s) 3, 176
PpsI GAGTC 2 cut(s) 3, 176
Psp124BI GAGCTC 1 cut(s) 312
Psp6I CCWGG 3 cut(s) 1338, 1554, 1704
PspEI GGTNACC 1 cut(s) 236
PspGI CCWGG 3 cut(s) 1338, 1554, 1704
PspLI CGTACG 1 cut(s) 201
PspN4I GGNNCC 4 cut(s) 101, 115, 331, 782
PspPI GGNCC 3 cut(s) 100, 329, 1552
PstI CTGCAG 1 cut(s) 1027
PstNI CAGNNNCTG 1 cut(s) 587
PsuI RGATCY 3 cut(s) 82, 780, 841
PsyI GACNNNGTC 1 cut(s) 1672
PvuII CAGCTG 1 cut(s) 1592
RsaI GTAC 4 cut(s) 203, 275, 418, 1710
RsaNI GTAC 4 cut(s) 202, 274, 417, 1709
RseI CAYNNNNRTG 2 cut(s) 816, 879
SacI GAGCTC 1 cut(s) 312
SapI GCTCTTC 2 cut(s) 378, 1221
SaqAI TTAA 5 cut(s) 578, 695, 713, 1110, 1574
SatI GCNGC 8 cut(s) 43, 58, 265, 282, 304, 1023, 1320, 1323
Sau3AI GATC 5 cut(s) 82, 433, 780, 841, 1333
Sau96I GGNCC 3 cut(s) 100, 329, 1552
SchI GAGTC 2 cut(s) 3, 176
ScrFI CCNGG 4 cut(s) 333, 1340, 1556, 1706
SduI GDGCHC 1 cut(s) 312
SfaNI GCATC 4 cut(s) 1009, 1213, 1336, 1357
SfcI CTRYAG 1 cut(s) 1023
SinI GGWCC 1 cut(s) 100
SmiMI CAYNNNNRTG 2 cut(s) 816, 879
SmlI CTYRAG 2 cut(s) 317, 429
SmoI CTYRAG 2 cut(s) 317, 429
SpeI ACTAGT 1 cut(s) 721
SphI GCATGC 1 cut(s) 1127
Sse9I AATT 8 cut(s) 107, 627, 714, 924, 1082, 1167, 1357, 1423
SseBI AGGCCT 1 cut(s) 348
SsiI CCGC 9 cut(s) 42, 58, 103, 160, 264, 282, 1286, 1319, 1641
SspI AATATT 2 cut(s) 541, 617
SspMI CTAG 3 cut(s) 461, 722, 1428
SstI GAGCTC 1 cut(s) 312
StuI AGGCCT 1 cut(s) 348
StyD4I CCNGG 4 cut(s) 331, 1338, 1554, 1704
StyI CCWWGG 1 cut(s) 776
TaaI ACNGT 2 cut(s) 475, 490
TaiI ACGT 3 cut(s) 51, 203, 1530
TaqI TCGA 2 cut(s) 470, 1248
TasI AATT 8 cut(s) 107, 627, 714, 924, 1082, 1167, 1357, 1423
TatI WGTACW 2 cut(s) 273, 416
TauI GCSGC 5 cut(s) 45, 60, 267, 284, 1322
TfiI GAWTC 3 cut(s) 322, 336, 984
Tru1I TTAA 5 cut(s) 578, 695, 713, 1110, 1574
Tru9I TTAA 5 cut(s) 578, 695, 713, 1110, 1574
TscAI CASTG 2 cut(s) 978, 1165
TseFI GTSAC 1 cut(s) 592
TseI GCWGC 3 cut(s) 303, 1022, 1322
Tsp45I GTSAC 1 cut(s) 592
TspDTI ATGAA 9 cut(s) 492, 909, 947, 1011, 1052, 1381, 1386, 1390, 1535
TspRI CASTG 2 cut(s) 978, 1165
Tth111I GACNNNGTC 1 cut(s) 1672
VpaK11BI GGWCC 1 cut(s) 100
XagI CCTNNNNNAGG 1 cut(s) 694
XapI RAATTY 2 cut(s) 1082, 1167
XceI RCATGY 3 cut(s) 760, 821, 1127
XspI CTAG 3 cut(s) 461, 722, 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.