RchiOBHm_Chr6g0256491

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
Physical Location & Seq
Reverse (-)
11674499 .. 11674792
294 bp
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UTR
Exon/CDS
Intron
PRQ23009

Sequence Viewer

Length: 294 bp
ATGGTGACATGGCCTCTGGCTGCTGAACAATTTTACAATGAGAAATTGGTGACCCAATTGCTGAAGATTGGAGTTGGGGTTGGGGCTCAGAAATGGATCAGGCGTTTTGGGGATAGTGTGAAGAAGGAAGCTATTGTGAAAGCTGTGAGTCAGATCATGGTGGGTGAAGAAGCAGAGGTAAGGAGAAGCAGAGCTAGGGAGCTTGGAAAGCAAGCAAGGAGGGCTGTTGAAGAAGGAGGATCATCATACCAGGATTTTAATAAGCTAATTGAAGAATTGAAATCCCACAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

97

Amino Acids

10.96

Weight (kDa)

9.57

Isoelectric Point (pI)

51.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 2 cut(s) 104, 247
AcuI CTGAAG 1 cut(s) 83
AgsI TTSAA 3 cut(s) 230, 272, 280
AjnI CCWGG 1 cut(s) 249
AluBI AGCT 5 cut(s) 131, 143, 194, 202, 265
AluI AGCT 5 cut(s) 131, 143, 194, 202, 265
AlwI GGATC 2 cut(s) 104, 247
AoxI GGCC 1 cut(s) 11
ApeKI GCWGC 1 cut(s) 20
AsuHPI GGTGA 3 cut(s) 16, 61, 176
BanII GRGCYC 1 cut(s) 88
BbvI GCAGC 1 cut(s) 7
BciT130I CCWGG 1 cut(s) 251
BfaI CTAG 1 cut(s) 195
BisI GCNGC 1 cut(s) 21
BlsI GCNGC 1 cut(s) 22
Bme1390I CCNGG 1 cut(s) 251
BmrFI CCNGG 1 cut(s) 251
BsaXI ACNNNNNCTCC 2 cut(s) 63, 93
BseBI CCWGG 1 cut(s) 251
BseMII CTCAG 1 cut(s) 101
BseXI GCAGC 1 cut(s) 7
BshFI GGCC 1 cut(s) 13
BsnI GGCC 1 cut(s) 13
Bsp1286I GDGCHC 1 cut(s) 88
Bsp143I GATC 3 cut(s) 96, 153, 239
BspANI GGCC 1 cut(s) 13
BspCNI CTCAG 1 cut(s) 100
BspPI GGATC 2 cut(s) 104, 247
BssMI GATC 3 cut(s) 96, 153, 239
Bst2UI CCWGG 1 cut(s) 251
Bst4CI ACNGT 1 cut(s) 290
BstC8I GCNNGC 1 cut(s) 213
BstDEI CTNAG 1 cut(s) 87
BstEII GGTNACC 1 cut(s) 49
BstKTI GATC 3 cut(s) 99, 156, 242
BstMBI GATC 3 cut(s) 96, 153, 239
BstMWI GCNNNNNNNGC 2 cut(s) 208, 221
BstNI CCWGG 1 cut(s) 251
BstPI GGTNACC 1 cut(s) 49
BstSCI CCNGG 1 cut(s) 249
BstV1I GCAGC 1 cut(s) 7
BsuRI GGCC 1 cut(s) 13
Cac8I GCNNGC 1 cut(s) 213
CviAII CATG 2 cut(s) 9, 157
CviJI RGCY 9 cut(s) 13, 20, 86, 131, 143, 194, 202, 224, 265
CviKI_1 RGCY 9 cut(s) 13, 20, 86, 131, 143, 194, 202, 224, 265
DdeI CTNAG 1 cut(s) 87
DpnI GATC 3 cut(s) 98, 155, 241
DpnII GATC 3 cut(s) 96, 153, 239
Eco24I GRGCYC 1 cut(s) 88
Eco57I CTGAAG 1 cut(s) 83
Eco91I GGTNACC 1 cut(s) 49
EcoO65I GGTNACC 1 cut(s) 49
EcoRII CCWGG 1 cut(s) 249
EcoT38I GRGCYC 1 cut(s) 88
FaeI CATG 2 cut(s) 12, 160
FaiI YATR 3 cut(s) 10, 158, 247
FatI CATG 2 cut(s) 8, 156
Fnu4HI GCNGC 1 cut(s) 21
FriOI GRGCYC 1 cut(s) 88
Fsp4HI GCNGC 1 cut(s) 21
FspBI CTAG 1 cut(s) 195
GluI GCNGC 1 cut(s) 21
HaeIII GGCC 1 cut(s) 13
Hin1II CATG 2 cut(s) 12, 160
HinfI GANTC 1 cut(s) 148
HphI GGTGA 3 cut(s) 16, 61, 176
Hpy188I TCNGA 2 cut(s) 90, 153
HpyAV CCTTC 2 cut(s) 118, 227
HpyCH4III ACNGT 1 cut(s) 290
HpyF10VI GCNNNNNNNGC 2 cut(s) 208, 221
HpyF3I CTNAG 1 cut(s) 87
Hsp92II CATG 2 cut(s) 12, 160
Kzo9I GATC 3 cut(s) 96, 153, 239
LmnI GCTCC 1 cut(s) 199
LpnPI CCDG 4 cut(s) 2, 85, 236, 263
Lsp1109I GCAGC 1 cut(s) 7
MaeI CTAG 1 cut(s) 195
MaeIII GTNAC 2 cut(s) 4, 49
MalI GATC 3 cut(s) 98, 155, 241
MboI GATC 3 cut(s) 96, 153, 239
MboII GAAGA 5 cut(s) 76, 133, 179, 242, 284
MfeI CAATTG 1 cut(s) 56
MhlI GDGCHC 1 cut(s) 88
MluCI AATT 5 cut(s) 29, 44, 56, 267, 275
MlyI GAGTC 1 cut(s) 157
MnlI CCTC 4 cut(s) 24, 169, 213, 230
MseI TTAA 1 cut(s) 258
MspR9I CCNGG 1 cut(s) 251
MunI CAATTG 1 cut(s) 56
MvaI CCWGG 1 cut(s) 251
MwoI GCNNNNNNNGC 2 cut(s) 208, 221
NdeII GATC 3 cut(s) 96, 153, 239
NlaIII CATG 2 cut(s) 12, 160
NmuCI GTSAC 2 cut(s) 4, 49
PkrI GCNGC 1 cut(s) 22
PleI GAGTC 1 cut(s) 156
PpsI GAGTC 1 cut(s) 156
Psp6I CCWGG 1 cut(s) 249
PspEI GGTNACC 1 cut(s) 49
PspGI CCWGG 1 cut(s) 249
SaqAI TTAA 1 cut(s) 258
SatI GCNGC 1 cut(s) 21
Sau3AI GATC 3 cut(s) 96, 153, 239
SchI GAGTC 1 cut(s) 157
ScrFI CCNGG 1 cut(s) 251
SduI GDGCHC 1 cut(s) 88
SetI ASST 6 cut(s) 133, 145, 180, 196, 204, 267
Sse9I AATT 5 cut(s) 29, 44, 56, 267, 275
SspMI CTAG 1 cut(s) 195
StyD4I CCNGG 1 cut(s) 249
TaaI ACNGT 1 cut(s) 290
TasI AATT 5 cut(s) 29, 44, 56, 267, 275
Tru1I TTAA 1 cut(s) 258
Tru9I TTAA 1 cut(s) 258
TseFI GTSAC 2 cut(s) 4, 49
TseI GCWGC 1 cut(s) 20
Tsp45I GTSAC 2 cut(s) 4, 49
XspI CTAG 1 cut(s) 195
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.