RLG00000014801

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006957
Physical Location & Seq
Forward (+)
57715094 .. 57724498
9405 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000014801

Sequence Viewer

Length: 1257 bp
ATGGAGTCACTGTTGACAGCTTCTATGAATAATGAACTTGAACCAGATTATGCAGATCATTACAGGTGGGTGTATAGGAGGAAGGCATGGCATAATGGACCAGTTTCCCTGTGCAACAAGGCAGCAGAAGAAAGAGCCAAGAGGGGATTAGTGGAAAGCTCAGCTGCTGAGCAACACCAGTGCTTGAAATGGCTTGATTCTAAGAAACCCAATTCAGTTGTATATGTATGTTTCGGAAGCATGATCAACTTTGCTGGCTGTCAGCTCCTAGAAATTGCAGCAGGCCTTGAGGCTTCTGGACAAGACTTCCTTTGGTTTGTGAAGAAACAAAAGAAAGAGATAGAAGAGTGGTGGCCTGAAGGATTTGCGAAGAGAATGGAAGGTAAGGGACTGATTATAAGAGATTGGGCTCCTCAAGTGCTAATTCTTGAGCATGAAGCAATACTCCATGTTGGGGTTGCTATTGGTGCTGAAAAATGGGTTTCATTTGTGGATAAAAGTTTGAAGAGTGAGGCCCGTGTGAAGAGGGAGGCCATTGAGAGGGCTGGGACAAGAATCATGGTGGGTGATGATGCAGAGGAAATGAGAAACAGAGTTAAAGTGCTTGGAGAGATGACAAACAGGGCTGTTGAAGAAGGTGGTTCACATTTTTCGGATTTAACTGCTCTAATTGAAGAGTTGAGGACCCTTGTCCGATACAGTGAGACGGTGGACAACTCGTCGGCGCCGCCGCAATGTATCCAGTGCATTCTCTCAGAAAAAGCCACCGGCTTCTCTTATCCTCGTCGGCTCCTCCTCCCTTTCTCAAAGGTTCCTAATCCGACTTTGGTGGCTACAAGGGCTTTTGTGGCTTCTTCAGAGTTTTTAACATCTCATGCTCTGTCTCTTACTTGCAATAGGCCTCCTCCTCCACCTTGGACTCTTCCTTGTTTGGATTTTGTTAAGATAAATACAGATGCTTCTTGGGATAAACAATCTCTGCAGGCTGGTTTGGCAGTGATAGTTCGAAATAGTTCTGGTGGGCTTCTTTATGGCAAGACGAGGATTGTTAGGGCCTCTTCGATCCTTCTTGCTAAAACTTTGGCCCTTTATCAAGCTAACAAAACTCTTGTACTTGCTGCTACATCTGCTATTACTGTCTACTCTATGCAAGCTATTAAGCTACATGCTTCTATCTTCAATAGCTTGATTGGCTTAACGGATCAAAATGGATTTGAGTCTGTGGGATGTGCGGCAAACAAGTACTTGACACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

419

Amino Acids

46.38

Weight (kDa)

8.47

Isoelectric Point (pI)

38.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 398
AccB1I GGYRCC 1 cut(s) 724
AccI GTMKAC 1 cut(s) 1140
AciI CCGC 3 cut(s) 728, 731, 1232
AclWI GGATC 2 cut(s) 1057, 1209
AcuI CTGAAG 2 cut(s) 378, 840
AcyI GRCGYC 1 cut(s) 725
AfaI GTAC 2 cut(s) 1113, 1244
AfiI CCNNNNNNNGG 2 cut(s) 454, 540
AgsI TTSAA 6 cut(s) 41, 187, 505, 632, 674, 1180
AhdI GACNNNNNGTC 1 cut(s) 718
AluBI AGCT 8 cut(s) 20, 159, 164, 265, 1097, 1154, 1162, 1185
AluI AGCT 8 cut(s) 20, 159, 164, 265, 1097, 1154, 1162, 1185
Alw26I GTCTC 2 cut(s) 698, 888
AlwI GGATC 2 cut(s) 1057, 1209
AlwNI CAGNNNCTG 1 cut(s) 167
AoxI GGCC 7 cut(s) 283, 353, 513, 531, 899, 1053, 1083
ApeKI GCWGC 4 cut(s) 122, 164, 278, 1118
Asp700I GAANNNNTTC 1 cut(s) 1012
AspLEI GCGC 1 cut(s) 727
AspS9I GGNCC 5 cut(s) 98, 514, 684, 1053, 1084
AsuHPI GGTGA 1 cut(s) 578
AsuII TTCGAA 1 cut(s) 1006
AvaII GGWCC 2 cut(s) 98, 684
BanI GGYRCC 1 cut(s) 724
BanII GRGCYC 1 cut(s) 412
BbvI GCAGC 4 cut(s) 134, 151, 290, 1105
BciVI GTATCC 1 cut(s) 749
BclI TGATCA 1 cut(s) 243
BcoDI GTCTC 2 cut(s) 698, 888
BfaI CTAG 1 cut(s) 269
BfmI CTRYAG 1 cut(s) 980
BfoI RGCGCY 1 cut(s) 728
BfuI GTATCC 1 cut(s) 749
BisI GCNGC 7 cut(s) 123, 165, 279, 728, 731, 1119, 1233
BlpI GCTNAGC 2 cut(s) 160, 168
BlsI GCNGC 7 cut(s) 124, 166, 280, 729, 732, 1120, 1234
BmcAI AGTACT 1 cut(s) 1244
Bme18I GGWCC 2 cut(s) 98, 684
BmeRI GACNNNNNGTC 1 cut(s) 718
BmgT120I GGNCC 5 cut(s) 98, 514, 684, 1053, 1084
BmiI GGNNCC 5 cut(s) 411, 686, 726, 791, 813
BmsI GCATC 2 cut(s) 562, 946
BoxI GACNNNNGTC 1 cut(s) 689
Bpu1102I GCTNAGC 2 cut(s) 160, 168
Bpu14I TTCGAA 1 cut(s) 1006
BpuEI CTTGAG 3 cut(s) 308, 399, 449
BsaHI GRCGYC 1 cut(s) 725
BsaJI CCNNGG 1 cut(s) 914
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 454, 540
Bse118I RCCGGY 1 cut(s) 767
Bse1I ACTGG 3 cut(s) 101, 178, 742
Bse3DI GCAATG 1 cut(s) 740
BseDI CCNNGG 1 cut(s) 914
BseGI GGATG 1 cut(s) 1232
BseLI CCNNNNNNNGG 2 cut(s) 454, 540
BseMI GCAATG 1 cut(s) 740
BseMII CTCAG 3 cut(s) 159, 174, 768
BseNI ACTGG 3 cut(s) 101, 178, 742
BseRI GAGGAG 5 cut(s) 402, 782, 785, 894, 897
BseXI GCAGC 4 cut(s) 134, 151, 290, 1105
BseYI CCCAGC 1 cut(s) 545
BshFI GGCC 7 cut(s) 285, 355, 515, 533, 901, 1055, 1085
BshNI GGYRCC 1 cut(s) 724
BsiSI CCGG 1 cut(s) 768
BslFI GGGAC 2 cut(s) 402, 562
BslI CCNNNNNNNGG 2 cut(s) 454, 540
BsmAI GTCTC 2 cut(s) 698, 888
BsmBI CGTCTC 1 cut(s) 698
BsmFI GGGAC 2 cut(s) 402, 562
BsmI GAATGC 1 cut(s) 747
BsnI GGCC 7 cut(s) 285, 355, 515, 533, 901, 1055, 1085
Bsp119I TTCGAA 1 cut(s) 1006
Bsp1286I GDGCHC 1 cut(s) 412
Bsp143I GATC 4 cut(s) 55, 243, 1062, 1201
Bsp1720I GCTNAGC 2 cut(s) 160, 168
BspACI CCGC 3 cut(s) 728, 731, 1232
BspANI GGCC 7 cut(s) 285, 355, 515, 533, 901, 1055, 1085
BspCNI CTCAG 3 cut(s) 160, 173, 767
BspLI GGNNCC 5 cut(s) 411, 686, 726, 791, 813
BspMAI CTGCAG 1 cut(s) 984
BspPI GGATC 2 cut(s) 1057, 1209
BspT104I TTCGAA 1 cut(s) 1006
BspT107I GGYRCC 1 cut(s) 724
BsrDI GCAATG 1 cut(s) 740
BsrFI RCCGGY 1 cut(s) 767
BsrI ACTGG 3 cut(s) 101, 178, 742
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 1 cut(s) 914
BssMI GATC 4 cut(s) 55, 243, 1062, 1201
BssNI GRCGYC 1 cut(s) 725
BssT1I CCWWGG 1 cut(s) 914
Bst4CI ACNGT 4 cut(s) 12, 701, 709, 1138
Bst6I CTCTTC 7 cut(s) 339, 365, 500, 518, 669, 927, 1063
BstACI GRCGYC 1 cut(s) 725
BstBI TTCGAA 1 cut(s) 1006
BstC8I GCNNGC 4 cut(s) 256, 283, 984, 1152
BstDEI CTNAG 4 cut(s) 160, 168, 201, 754
BstF5I GGATG 1 cut(s) 1232
BstH2I RGCGCY 1 cut(s) 728
BstHHI GCGC 1 cut(s) 727
BstKTI GATC 4 cut(s) 58, 246, 1065, 1204
BstMAI GTCTC 2 cut(s) 698, 888
BstMBI GATC 4 cut(s) 55, 243, 1062, 1201
BstMWI GCNNNNNNNGC 6 cut(s) 467, 839, 848, 992, 1127, 1191
BstNSI RCATGY 1 cut(s) 1169
BstPAI GACNNNNGTC 1 cut(s) 689
BstSFI CTRYAG 1 cut(s) 980
BstV1I GCAGC 4 cut(s) 134, 151, 290, 1105
BsuI GTATCC 1 cut(s) 749
BsuRI GGCC 7 cut(s) 285, 355, 515, 533, 901, 1055, 1085
BtsCI GGATG 1 cut(s) 1232
BtsI GCAGTG 1 cut(s) 1002
BtsIMutI CAGTG 5 cut(s) 8, 185, 706, 749, 1002
Cac8I GCNNGC 4 cut(s) 256, 283, 984, 1152
CaiI CAGNNNCTG 1 cut(s) 167
CfoI GCGC 1 cut(s) 727
Cfr10I RCCGGY 1 cut(s) 767
Cfr13I GGNCC 5 cut(s) 98, 514, 684, 1053, 1084
Csp6I GTAC 2 cut(s) 1112, 1243
CviAII CATG 7 cut(s) 87, 241, 434, 449, 559, 875, 1166
CviQI GTAC 2 cut(s) 1112, 1243
DdeI CTNAG 4 cut(s) 160, 168, 201, 754
DinI GGCGCC 1 cut(s) 726
DpnI GATC 4 cut(s) 57, 245, 1064, 1203
DpnII GATC 4 cut(s) 55, 243, 1062, 1201
DriI GACNNNNNGTC 1 cut(s) 718
Eam1104I CTCTTC 7 cut(s) 339, 365, 500, 518, 669, 927, 1063
Eam1105I GACNNNNNGTC 1 cut(s) 718
EarI CTCTTC 7 cut(s) 339, 365, 500, 518, 669, 927, 1063
Eco130I CCWWGG 1 cut(s) 914
Eco147I AGGCCT 2 cut(s) 285, 901
Eco24I GRGCYC 1 cut(s) 412
Eco47I GGWCC 2 cut(s) 98, 684
Eco57I CTGAAG 2 cut(s) 378, 840
EcoO109I RGGNCCY 2 cut(s) 684, 1053
EcoT14I CCWWGG 1 cut(s) 914
EcoT38I GRGCYC 1 cut(s) 412
EgeI GGCGCC 1 cut(s) 726
EheI GGCGCC 1 cut(s) 726
ErhI CCWWGG 1 cut(s) 914
Esp3I CGTCTC 1 cut(s) 698
FaeI CATG 7 cut(s) 90, 244, 437, 452, 562, 878, 1169
FalI AAGNNNNNCTT 2 cut(s) 294, 326
FaqI GGGAC 2 cut(s) 402, 562
FatI CATG 7 cut(s) 86, 240, 433, 448, 558, 874, 1165
FbaI TGATCA 1 cut(s) 243
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 7 cut(s) 123, 165, 279, 728, 731, 1119, 1233
FokI GGATG 1 cut(s) 1239
FriOI GRGCYC 1 cut(s) 412
Fsp4HI GCNGC 7 cut(s) 123, 165, 279, 728, 731, 1119, 1233
FspBI CTAG 1 cut(s) 269
GlaI GCGC 1 cut(s) 726
GluI GCNGC 7 cut(s) 123, 165, 279, 728, 731, 1119, 1233
GsaI CCCAGC 1 cut(s) 549
HaeII RGCGCY 1 cut(s) 728
HaeIII GGCC 7 cut(s) 285, 355, 515, 533, 901, 1055, 1085
HapII CCGG 1 cut(s) 768
HhaI GCGC 1 cut(s) 727
Hin1I GRCGYC 1 cut(s) 725
Hin1II CATG 7 cut(s) 90, 244, 437, 452, 562, 878, 1169
Hin6I GCGC 1 cut(s) 725
HinP1I GCGC 1 cut(s) 725
HincII GTYRAC 1 cut(s) 15
HindII GTYRAC 1 cut(s) 15
HinfI GANTC 5 cut(s) 5, 197, 555, 919, 1217
HpaII CCGG 1 cut(s) 768
HphI GGTGA 1 cut(s) 578
Hpy166II GTNNAC 4 cut(s) 15, 644, 712, 1141
Hpy188I TCNGA 6 cut(s) 236, 655, 695, 757, 822, 859
Hpy188III TCNNGA 2 cut(s) 297, 428
Hpy8I GTNNAC 4 cut(s) 15, 644, 712, 1141
Hpy99I CGWCG 2 cut(s) 724, 789
HpyAV CCTTC 5 cut(s) 76, 353, 374, 629, 1076
HpyCH4III ACNGT 4 cut(s) 12, 701, 709, 1138
HpyCH4V TGCA 8 cut(s) 53, 114, 278, 575, 747, 894, 982, 1150
HpyF10VI GCNNNNNNNGC 6 cut(s) 467, 839, 848, 992, 1127, 1191
HpyF3I CTNAG 4 cut(s) 160, 168, 201, 754
Hsp92I GRCGYC 1 cut(s) 725
Hsp92II CATG 7 cut(s) 90, 244, 437, 452, 562, 878, 1169
HspAI GCGC 1 cut(s) 725
KasI GGCGCC 1 cut(s) 724
Ksp22I TGATCA 1 cut(s) 243
Kzo9I GATC 4 cut(s) 55, 243, 1062, 1201
LmnI GCTCC 3 cut(s) 270, 415, 795
Lsp1109I GCAGC 4 cut(s) 134, 151, 290, 1105
LweI GCATC 2 cut(s) 562, 946
MaeI CTAG 1 cut(s) 269
MaeIII GTNAC 1 cut(s) 6
MalI GATC 4 cut(s) 57, 245, 1064, 1203
MboI GATC 4 cut(s) 55, 243, 1062, 1201
MhlI GDGCHC 1 cut(s) 412
MluCI AATT 4 cut(s) 211, 273, 423, 669
Mly113I GGCGCC 1 cut(s) 725
MlyI GAGTC 3 cut(s) 14, 913, 1226
MmeI TCCRAC 1 cut(s) 845
MroXI GAANNNNTTC 1 cut(s) 1012
MseI TTAA 6 cut(s) 597, 659, 866, 942, 1158, 1196
MspA1I CMGCKG 1 cut(s) 164
MspI CCGG 1 cut(s) 768
Mva1269I GAATGC 1 cut(s) 747
MwoI GCNNNNNNNGC 6 cut(s) 467, 839, 848, 992, 1127, 1191
NarI GGCGCC 1 cut(s) 725
NdeII GATC 4 cut(s) 55, 243, 1062, 1201
NlaIII CATG 7 cut(s) 90, 244, 437, 452, 562, 878, 1169
NlaIV GGNNCC 5 cut(s) 411, 686, 726, 791, 813
NmuCI GTSAC 1 cut(s) 6
NspI RCATGY 1 cut(s) 1169
NspV TTCGAA 1 cut(s) 1006
PceI AGGCCT 2 cut(s) 285, 901
PctI GAATGC 1 cut(s) 747
PdmI GAANNNNTTC 1 cut(s) 1012
PfeI GAWTC 2 cut(s) 197, 555
PkrI GCNGC 7 cut(s) 124, 166, 280, 729, 732, 1120, 1234
PleI GAGTC 3 cut(s) 13, 913, 1225
PluTI GGCGCC 1 cut(s) 728
PpsI GAGTC 3 cut(s) 13, 913, 1225
PpuMI RGGWCCY 1 cut(s) 684
PshAI GACNNNNGTC 1 cut(s) 689
PsiI TTATAA 1 cut(s) 398
Psp5II RGGWCCY 1 cut(s) 684
PspFI CCCAGC 1 cut(s) 545
PspN4I GGNNCC 5 cut(s) 411, 686, 726, 791, 813
PspPI GGNCC 5 cut(s) 98, 514, 684, 1053, 1084
PspPPI RGGWCCY 1 cut(s) 684
PstI CTGCAG 1 cut(s) 984
PstNI CAGNNNCTG 1 cut(s) 167
PvuII CAGCTG 1 cut(s) 164
RsaI GTAC 2 cut(s) 1113, 1244
RsaNI GTAC 2 cut(s) 1112, 1243
SaqAI TTAA 6 cut(s) 597, 659, 866, 942, 1158, 1196
SatI GCNGC 7 cut(s) 123, 165, 279, 728, 731, 1119, 1233
Sau3AI GATC 4 cut(s) 55, 243, 1062, 1201
Sau96I GGNCC 5 cut(s) 98, 514, 684, 1053, 1084
ScaI AGTACT 1 cut(s) 1244
SchI GAGTC 3 cut(s) 14, 913, 1226
SduI GDGCHC 1 cut(s) 412
SfaNI GCATC 2 cut(s) 562, 946
SfcI CTRYAG 1 cut(s) 980
SfoI GGCGCC 1 cut(s) 726
SfuI TTCGAA 1 cut(s) 1006
SinI GGWCC 2 cut(s) 98, 684
SmlI CTYRAG 3 cut(s) 287, 414, 428
SmoI CTYRAG 3 cut(s) 287, 414, 428
Sse9I AATT 4 cut(s) 211, 273, 423, 669
SseBI AGGCCT 2 cut(s) 285, 901
SsiI CCGC 3 cut(s) 728, 731, 1232
SspDI GGCGCC 1 cut(s) 724
SspMI CTAG 1 cut(s) 269
StuI AGGCCT 2 cut(s) 285, 901
StyI CCWWGG 1 cut(s) 914
TaaI ACNGT 4 cut(s) 12, 701, 709, 1138
TaqI TCGA 2 cut(s) 1006, 1061
TasI AATT 4 cut(s) 211, 273, 423, 669
TatI WGTACW 2 cut(s) 1111, 1242
TauI GCSGC 3 cut(s) 730, 733, 1235
TfiI GAWTC 2 cut(s) 197, 555
Tru1I TTAA 6 cut(s) 597, 659, 866, 942, 1158, 1196
Tru9I TTAA 6 cut(s) 597, 659, 866, 942, 1158, 1196
TscAI CASTG 5 cut(s) 15, 185, 706, 749, 1002
TseFI GTSAC 1 cut(s) 6
TseI GCWGC 4 cut(s) 122, 164, 278, 1118
Tsp45I GTSAC 1 cut(s) 6
TspDTI ATGAA 4 cut(s) 41, 48, 450, 474
TspGWI ACGGA 1 cut(s) 1214
TspRI CASTG 5 cut(s) 15, 185, 706, 749, 1002
VpaK11BI GGWCC 2 cut(s) 98, 684
XceI RCATGY 1 cut(s) 1169
XmiI GTMKAC 1 cut(s) 1140
XmnI GAANNNNTTC 1 cut(s) 1012
XspI CTAG 1 cut(s) 269
ZrmI AGTACT 1 cut(s) 1244
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.