RLG00000013347

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0006957
Physical Location & Seq
Forward (+)
30190985 .. 30192381
1397 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000013347

Sequence Viewer

Length: 1188 bp
ATGGGTCTAGGCCACAGTTTACCCCTCTTGGACATTGCCAAACTATTTGCATCACGAGGTGTAAAATCCTCCATAATAACCACCCCTGTCAGTGCTGCACTTCTCTCCAAACAACTCCGAACAAGCAAAAGTTTGGGTTCTGGAATTGAATTTCTTGTCATCAAATTCCCATCGACTGAAGTAGGGTTGCCTGAAGGTATTGAAACTTCGAACTCAGCAACAACCCGAGAAATGATGGGAAAACTCATGGAAGCTACCGCTCTGCTTGAACCAAAGATGTTGCTGCCAAGTTTGGGATTCCGAGGCTCGTCTTTCATGAAGCTGGTTTTTTTCCCGTTGTGTGCTTCATTGAGTGTGATGTTGTACCACCCTCACATGAAGGTTTCATTTGATTTAGAATCTTTTGTTATTCCTAATCTCCCACATGAGATTAAGAGCACAAGAAACCAAGTACTTGCTTTTCTTAATGTGGATTCCAAAACAGAACTCTTCAAGCTGGTCAAAGCATCTATAGAGGTTGACGAAAGGAGCTTTGGGATTCTTGTTAACAGCTTCTACGAACTTGAACCAGAATATGCAGATCACTATAGGAAGGTGTTTGGGAGGAAGTCATGGCATATCGGCCCGCTTGTAGAAATTGCCTTGGCTCTTGAGTCTTCTTATCAGCAATTCATTTGGGTTGTCAGGAAAGAAAAGAATGATAAAGGAGAGTGGTTGCCTGATGAAGGATTTGAGCAGAGGTTAGAAGATAAGGGACTGATAATGAGAGGCTGGCCTCCCCAACAACTAATTCTTGAATATGAAGCAGTTGGGGCCTTTATGACTCATTGTGGTTGGAACTCTATCCTTAAAGGAGTGGCTTTTGGGGTGCCAATGATCAGCTGGCCAGTGTCCGCAGAGCAGTTCTACAATGAGAAGTTGGTGACTCAGTTGCTTGGGATTGGGGTTGTTGTTGGGGCTGAAAAGTGGGATACATTTGAGGATGATAGTCTGAAAAGCGAAGCCAGCGTGAAGATGGAGGCCATAGAGAAGGCTGTGACTGAAATCATGATGGGTGATGAAGCAGAGGAAATGAGAAGCAGTGTTAAAGAGGTTGAAGAGATAGGAAGACAGGCTGTTGAAGAAGGCGGTTCATCGTTCTTCGATTTAACAGCTCTTATTGAAGAGTTGAGGTTCCTTGGGATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00906 ko01100 ko01110 map00906 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

396

Amino Acids

44.15

Weight (kDa)

5.1

Isoelectric Point (pI)

42.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 212 - 310 1.4e-12 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 868
AccBSI CCGCTC 1 cut(s) 260
AciI CCGC 4 cut(s) 258, 626, 894, 1128
AcoI YGGCCR 1 cut(s) 884
AcsI RAATTY 2 cut(s) 149, 164
AcuI CTGAAG 2 cut(s) 198, 213
AdeI CACNNNGTG 1 cut(s) 59
AfaI GTAC 2 cut(s) 365, 453
AfiI CCNNNNNNNGG 2 cut(s) 293, 725
AgsI TTSAA 9 cut(s) 149, 203, 269, 493, 566, 797, 1097, 1121, 1163
AjuI GAANNNNNNNTTGG 4 cut(s) 516, 548, 774, 806
AluBI AGCT 7 cut(s) 254, 322, 496, 531, 552, 882, 1154
AluI AGCT 7 cut(s) 254, 322, 496, 531, 552, 882, 1154
Alw21I GWGCWC 1 cut(s) 440
Ama87I CYCGRG 1 cut(s) 225
AoxI GGCC 6 cut(s) 10, 622, 773, 813, 884, 1020
ApeKI GCWGC 2 cut(s) 95, 283
ApoI RAATTY 2 cut(s) 149, 164
AspS9I GGNCC 2 cut(s) 623, 813
AsuHPI GGTGA 2 cut(s) 934, 1067
AsuII TTCGAA 1 cut(s) 209
AvaI CYCGRG 1 cut(s) 225
BalI TGGCCA 1 cut(s) 886
BanI GGYRCC 1 cut(s) 868
BarI GAAGNNNNNNTAC 2 cut(s) 190, 222
BauI CACGAG 1 cut(s) 54
BbsI GAAGAC 2 cut(s) 648, 1114
Bbv12I GWGCWC 1 cut(s) 440
BbvI GCAGC 2 cut(s) 82, 270
BccI CCATC 4 cut(s) 178, 229, 1009, 1045
BciVI GTATCC 1 cut(s) 964
BclI TGATCA 1 cut(s) 876
BfaI CTAG 1 cut(s) 8
BfmI CTRYAG 2 cut(s) 510, 586
BfuI GTATCC 1 cut(s) 964
BisI GCNGC 2 cut(s) 96, 284
BlsI GCNGC 2 cut(s) 97, 285
BmcAI AGTACT 1 cut(s) 453
BmeT110I CYCGRG 1 cut(s) 225
BmgT120I GGNCC 2 cut(s) 623, 813
BmiI GGNNCC 3 cut(s) 814, 870, 1175
BmsI GCATC 2 cut(s) 59, 515
BpiI GAAGAC 2 cut(s) 648, 1114
Bpu14I TTCGAA 1 cut(s) 209
BpuEI CTTGAG 1 cut(s) 671
BsaJI CCNNGG 3 cut(s) 301, 642, 1177
Bsc4I CCNNNNNNNGG 2 cut(s) 293, 725
Bse1I ACTGG 1 cut(s) 887
Bse3DI GCAATG 1 cut(s) 33
BseDI CCNNGG 3 cut(s) 301, 642, 1177
BseGI GGATG 1 cut(s) 988
BseLI CCNNNNNNNGG 2 cut(s) 293, 725
BseMI GCAATG 1 cut(s) 33
BseMII CTCAG 2 cut(s) 228, 941
BseNI ACTGG 1 cut(s) 887
BseXI GCAGC 2 cut(s) 82, 270
BsgI GTGCAG 1 cut(s) 81
BshFI GGCC 6 cut(s) 12, 624, 775, 815, 886, 1022
BshNI GGYRCC 1 cut(s) 868
BsiHKAI GWGCWC 1 cut(s) 440
BsiHKCI CYCGRG 1 cut(s) 225
BslFI GGGAC 1 cut(s) 768
BslI CCNNNNNNNGG 2 cut(s) 293, 725
BsmFI GGGAC 1 cut(s) 768
BsnI GGCC 6 cut(s) 12, 624, 775, 815, 886, 1022
BsoBI CYCGRG 1 cut(s) 225
Bsp119I TTCGAA 1 cut(s) 209
Bsp1286I GDGCHC 1 cut(s) 440
Bsp143I GATC 3 cut(s) 580, 876, 1182
BspACI CCGC 4 cut(s) 258, 626, 894, 1128
BspANI GGCC 6 cut(s) 12, 624, 775, 815, 886, 1022
BspCNI CTCAG 2 cut(s) 227, 940
BspHI TCATGA 2 cut(s) 315, 1047
BspLI GGNNCC 3 cut(s) 814, 870, 1175
BspT104I TTCGAA 1 cut(s) 209
BspT107I GGYRCC 1 cut(s) 868
BsrBI CCGCTC 1 cut(s) 260
BsrDI GCAATG 1 cut(s) 33
BsrI ACTGG 1 cut(s) 887
BssECI CCNNGG 3 cut(s) 301, 642, 1177
BssMI GATC 3 cut(s) 580, 876, 1182
BssSI CACGAG 1 cut(s) 54
BssT1I CCWWGG 2 cut(s) 642, 1177
Bst2BI CACGAG 1 cut(s) 54
Bst4CI ACNGT 1 cut(s) 17
Bst6I CTCTTC 3 cut(s) 494, 1092, 1158
BstBI TTCGAA 1 cut(s) 209
BstC8I GCNNGC 4 cut(s) 626, 773, 884, 1006
BstDEI CTNAG 2 cut(s) 214, 927
BstENI CCTNNNNNAGG 1 cut(s) 723
BstF5I GGATG 1 cut(s) 988
BstKTI GATC 3 cut(s) 583, 879, 1185
BstMBI GATC 3 cut(s) 580, 876, 1182
BstMWI GCNNNNNNNGC 2 cut(s) 812, 1005
BstSFI CTRYAG 2 cut(s) 510, 586
BstV1I GCAGC 2 cut(s) 82, 270
BstV2I GAAGAC 2 cut(s) 648, 1114
BstX2I RGATCY 1 cut(s) 1182
BstYI RGATCY 1 cut(s) 1182
BsuI GTATCC 1 cut(s) 964
BsuRI GGCC 6 cut(s) 12, 624, 775, 815, 886, 1022
BtsCI GGATG 1 cut(s) 988
BtsI GCAGTG 1 cut(s) 1087
BtsIMutI CAGTG 3 cut(s) 97, 894, 1087
Cac8I GCNNGC 4 cut(s) 626, 773, 884, 1006
CciI TCATGA 2 cut(s) 315, 1047
Cfr13I GGNCC 2 cut(s) 623, 813
Csp6I GTAC 2 cut(s) 364, 452
CviAII CATG 6 cut(s) 247, 316, 376, 425, 612, 1048
CviQI GTAC 2 cut(s) 364, 452
DdeI CTNAG 2 cut(s) 214, 927
DpnI GATC 3 cut(s) 582, 878, 1184
DpnII GATC 3 cut(s) 580, 876, 1182
DraIII CACNNNGTG 1 cut(s) 59
EaeI YGGCCR 1 cut(s) 884
Eam1104I CTCTTC 3 cut(s) 494, 1092, 1158
EarI CTCTTC 3 cut(s) 494, 1092, 1158
Eco130I CCWWGG 2 cut(s) 642, 1177
Eco57I CTGAAG 2 cut(s) 198, 213
Eco88I CYCGRG 1 cut(s) 225
EcoNI CCTNNNNNAGG 1 cut(s) 723
EcoO109I RGGNCCY 1 cut(s) 813
EcoT14I CCWWGG 2 cut(s) 642, 1177
ErhI CCWWGG 2 cut(s) 642, 1177
FaeI CATG 6 cut(s) 250, 319, 379, 428, 615, 1051
FaqI GGGAC 1 cut(s) 768
FatI CATG 6 cut(s) 246, 315, 375, 424, 611, 1047
FauI CCCGC 1 cut(s) 633
FbaI TGATCA 1 cut(s) 876
Fnu4HI GCNGC 2 cut(s) 96, 284
FokI GGATG 1 cut(s) 995
Fsp4HI GCNGC 2 cut(s) 96, 284
FspBI CTAG 1 cut(s) 8
GluI GCNGC 2 cut(s) 96, 284
HaeIII GGCC 6 cut(s) 12, 624, 775, 815, 886, 1022
Hin1II CATG 6 cut(s) 250, 319, 379, 428, 615, 1051
HincII GTYRAC 2 cut(s) 520, 547
HindII GTYRAC 2 cut(s) 520, 547
HinfI GANTC 7 cut(s) 297, 398, 473, 538, 653, 823, 925
HpaI GTTAAC 1 cut(s) 547
HphI GGTGA 2 cut(s) 934, 1067
Hpy166II GTNNAC 3 cut(s) 20, 520, 547
Hpy188I TCNGA 4 cut(s) 119, 302, 993, 1187
Hpy188III TCNNGA 7 cut(s) 54, 141, 316, 650, 685, 794, 1048
Hpy8I GTNNAC 3 cut(s) 20, 520, 547
HpyAV CCTTC 6 cut(s) 188, 373, 586, 719, 1024, 1118
HpyCH4III ACNGT 1 cut(s) 17
HpyCH4V TGCA 3 cut(s) 50, 98, 578
HpyF10VI GCNNNNNNNGC 2 cut(s) 812, 1005
HpyF3I CTNAG 2 cut(s) 214, 927
Hsp92II CATG 6 cut(s) 250, 319, 379, 428, 615, 1051
Ksp22I TGATCA 1 cut(s) 876
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 3 cut(s) 580, 876, 1182
LmnI GCTCC 1 cut(s) 528
Lsp1109I GCAGC 2 cut(s) 82, 270
LweI GCATC 2 cut(s) 59, 515
MaeI CTAG 1 cut(s) 8
MaeIII GTNAC 2 cut(s) 922, 1036
MalI GATC 3 cut(s) 582, 878, 1184
MbiI CCGCTC 1 cut(s) 260
MboI GATC 3 cut(s) 580, 876, 1182
MboII GAAGA 9 cut(s) 481, 648, 758, 1024, 1109, 1119, 1132, 1133, 1175
MflI RGATCY 1 cut(s) 1182
MhlI GDGCHC 1 cut(s) 440
MlsI TGGCCA 1 cut(s) 886
MluCI AATT 6 cut(s) 144, 149, 164, 636, 668, 789
MluNI TGGCCA 1 cut(s) 886
MlyI GAGTC 3 cut(s) 662, 817, 919
MmeI TCCRAC 1 cut(s) 815
Mox20I TGGCCA 1 cut(s) 886
MscI TGGCCA 1 cut(s) 886
MseI TTAA 6 cut(s) 432, 465, 546, 849, 1086, 1148
Msp20I TGGCCA 1 cut(s) 886
MspA1I CMGCKG 1 cut(s) 882
MwoI GCNNNNNNNGC 2 cut(s) 812, 1005
NdeII GATC 3 cut(s) 580, 876, 1182
NlaIII CATG 6 cut(s) 250, 319, 379, 428, 615, 1051
NlaIV GGNNCC 3 cut(s) 814, 870, 1175
NmuCI GTSAC 2 cut(s) 922, 1036
NspV TTCGAA 1 cut(s) 209
PagI TCATGA 2 cut(s) 315, 1047
PfeI GAWTC 4 cut(s) 297, 398, 473, 538
PkrI GCNGC 2 cut(s) 97, 285
PleI GAGTC 3 cut(s) 661, 817, 919
PpsI GAGTC 3 cut(s) 661, 817, 919
PspN4I GGNNCC 3 cut(s) 814, 870, 1175
PspPI GGNCC 2 cut(s) 623, 813
PsuI RGATCY 1 cut(s) 1182
PvuII CAGCTG 1 cut(s) 882
RsaI GTAC 2 cut(s) 365, 453
RsaNI GTAC 2 cut(s) 364, 452
SaqAI TTAA 6 cut(s) 432, 465, 546, 849, 1086, 1148
SatI GCNGC 2 cut(s) 96, 284
Sau3AI GATC 3 cut(s) 580, 876, 1182
Sau96I GGNCC 2 cut(s) 623, 813
ScaI AGTACT 1 cut(s) 453
SchI GAGTC 3 cut(s) 662, 817, 919
SduI GDGCHC 1 cut(s) 440
SfaNI GCATC 2 cut(s) 59, 515
SfcI CTRYAG 2 cut(s) 510, 586
SfuI TTCGAA 1 cut(s) 209
SmlI CTYRAG 1 cut(s) 650
SmoI CTYRAG 1 cut(s) 650
Sse9I AATT 6 cut(s) 144, 149, 164, 636, 668, 789
SsiI CCGC 4 cut(s) 258, 626, 894, 1128
SspMI CTAG 1 cut(s) 8
StyI CCWWGG 2 cut(s) 642, 1177
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 3 cut(s) 173, 209, 1143
TasI AATT 6 cut(s) 144, 149, 164, 636, 668, 789
TatI WGTACW 1 cut(s) 451
TfiI GAWTC 4 cut(s) 297, 398, 473, 538
Tru1I TTAA 6 cut(s) 432, 465, 546, 849, 1086, 1148
Tru9I TTAA 6 cut(s) 432, 465, 546, 849, 1086, 1148
TscAI CASTG 3 cut(s) 97, 894, 1087
TseFI GTSAC 2 cut(s) 922, 1036
TseI GCWGC 2 cut(s) 95, 283
Tsp45I GTSAC 2 cut(s) 922, 1036
TspRI CASTG 3 cut(s) 97, 894, 1087
XagI CCTNNNNNAGG 1 cut(s) 723
XapI RAATTY 2 cut(s) 149, 164
XcmI CCANNNNNNNNNTGG 2 cut(s) 879, 1012
XspI CTAG 1 cut(s) 8
ZrmI AGTACT 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.