Rmu_sc0001896.1_g000038

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001896.1
Physical Location & Seq
Forward (+)
113472 .. 113792
321 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001896.1_g000038.1.cds

Sequence Viewer

Length: 321 bp
atgatcacgtggccggtgttcggtgatcagttttacaatgagaagttggtgaccgagatacataggattggcgttcctgttggttctgaaaaatgggttttatcatttgtggatgcaagtgtagaaacagaagcgagtgtgaggagggaggccatagaggaggctgtgactagaatcatggtgggtgatgaagcagtggaaataagaagcagagttaaagaacttggagagaaggcaaggagggctgttgaagaaggtggctcatctttcttggatttatctgctctagttggagagttgaaccaccttctggaggcctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.8

Weight (kDa)

4.74

Isoelectric Point (pI)

47.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 310
AcoI YGGCCR 1 cut(s) 11
AcvI CACGTG 1 cut(s) 9
AfiI CCNNNNNNNGG 3 cut(s) 20, 310, 313
AgsI TTSAA 2 cut(s) 251, 301
AoxI GGCC 3 cut(s) 11, 150, 315
AsuHPI GGTGA 3 cut(s) 35, 61, 197
BbrPI CACGTG 1 cut(s) 9
BclI TGATCA 2 cut(s) 3, 25
BfaI CTAG 3 cut(s) 171, 287, 319
BmsI GCATC 1 cut(s) 103
BsaAI YACGTR 1 cut(s) 9
Bsc4I CCNNNNNNNGG 3 cut(s) 20, 310, 313
Bse118I RCCGGY 1 cut(s) 13
BseGI GGATG 1 cut(s) 118
BseLI CCNNNNNNNGG 3 cut(s) 20, 310, 313
BseRI GAGGAG 2 cut(s) 157, 173
BshFI GGCC 3 cut(s) 13, 152, 317
BsiSI CCGG 1 cut(s) 14
BslI CCNNNNNNNGG 3 cut(s) 20, 310, 313
BsnI GGCC 3 cut(s) 13, 152, 317
Bsp143I GATC 2 cut(s) 3, 25
BspANI GGCC 3 cut(s) 13, 152, 317
BsrFI RCCGGY 1 cut(s) 13
BssAI RCCGGY 1 cut(s) 13
BssMI GATC 2 cut(s) 3, 25
BstBAI YACGTR 1 cut(s) 9
BstEII GGTNACC 1 cut(s) 49
BstENI CCTNNNNNAGG 1 cut(s) 311
BstF5I GGATG 1 cut(s) 118
BstKTI GATC 2 cut(s) 6, 28
BstMBI GATC 2 cut(s) 3, 25
BstMWI GCNNNNNNNGC 1 cut(s) 242
BstPI GGTNACC 1 cut(s) 49
BsuRI GGCC 3 cut(s) 13, 152, 317
BtsCI GGATG 1 cut(s) 118
BtsI GCAGTG 1 cut(s) 201
BtsIMutI CAGTG 1 cut(s) 201
Cfr10I RCCGGY 1 cut(s) 13
CviAII CATG 1 cut(s) 178
CviJI RGCY 6 cut(s) 13, 152, 164, 245, 261, 317
CviKI_1 RGCY 6 cut(s) 13, 152, 164, 245, 261, 317
DpnI GATC 2 cut(s) 5, 27
DpnII GATC 2 cut(s) 3, 25
EaeI YGGCCR 1 cut(s) 11
Eco147I AGGCCT 1 cut(s) 317
Eco72I CACGTG 1 cut(s) 9
Eco91I GGTNACC 1 cut(s) 49
EcoNI CCTNNNNNAGG 1 cut(s) 311
EcoO65I GGTNACC 1 cut(s) 49
FaeI CATG 1 cut(s) 181
FaiI YATR 3 cut(s) 63, 155, 179
FatI CATG 1 cut(s) 177
FbaI TGATCA 2 cut(s) 3, 25
FokI GGATG 1 cut(s) 125
FspBI CTAG 3 cut(s) 171, 287, 319
HaeIII GGCC 3 cut(s) 13, 152, 317
HapII CCGG 1 cut(s) 14
Hin1II CATG 1 cut(s) 181
HinfI GANTC 1 cut(s) 174
HpaII CCGG 1 cut(s) 14
HphI GGTGA 3 cut(s) 35, 61, 197
Hpy188I TCNGA 1 cut(s) 88
Hpy188III TCNNGA 1 cut(s) 311
HpyAV CCTTC 3 cut(s) 226, 248, 317
HpyCH4IV ACGT 1 cut(s) 8
HpyCH4V TGCA 1 cut(s) 116
HpyF10VI GCNNNNNNNGC 1 cut(s) 242
HpySE526I ACGT 1 cut(s) 8
Hsp92II CATG 1 cut(s) 181
Ksp22I TGATCA 2 cut(s) 3, 25
Kzo9I GATC 2 cut(s) 3, 25
LpnPI CCDG 3 cut(s) 27, 90, 296
LweI GCATC 1 cut(s) 103
MaeI CTAG 3 cut(s) 171, 287, 319
MaeII ACGT 1 cut(s) 8
MaeIII GTNAC 2 cut(s) 49, 166
MalI GATC 2 cut(s) 5, 27
MboI GATC 2 cut(s) 3, 25
MboII GAAGA 1 cut(s) 263
MmeI TCCRAC 1 cut(s) 271
MnlI CCTC 7 cut(s) 135, 138, 142, 151, 154, 234, 307
MseI TTAA 1 cut(s) 216
MspI CCGG 1 cut(s) 14
MwoI GCNNNNNNNGC 1 cut(s) 242
NdeII GATC 2 cut(s) 3, 25
NlaIII CATG 1 cut(s) 181
NmuCI GTSAC 2 cut(s) 49, 166
PceI AGGCCT 1 cut(s) 317
PfeI GAWTC 1 cut(s) 174
PflMI CCANNNNNTGG 1 cut(s) 310
PmaCI CACGTG 1 cut(s) 9
PmlI CACGTG 1 cut(s) 9
Ppu21I YACGTR 1 cut(s) 9
PspCI CACGTG 1 cut(s) 9
PspEI GGTNACC 1 cut(s) 49
SaqAI TTAA 1 cut(s) 216
Sau3AI GATC 2 cut(s) 3, 25
SetI ASST 3 cut(s) 11, 259, 309
SfaNI GCATC 1 cut(s) 103
SseBI AGGCCT 1 cut(s) 317
SspMI CTAG 3 cut(s) 171, 287, 319
StuI AGGCCT 1 cut(s) 317
TaiI ACGT 1 cut(s) 11
TaqII GACCGA 1 cut(s) 68
TfiI GAWTC 1 cut(s) 174
Tru1I TTAA 1 cut(s) 216
Tru9I TTAA 1 cut(s) 216
TscAI CASTG 1 cut(s) 201
TseFI GTSAC 2 cut(s) 49, 166
Tsp45I GTSAC 2 cut(s) 49, 166
TspDTI ATGAA 1 cut(s) 204
TspRI CASTG 1 cut(s) 201
Van91I CCANNNNNTGG 1 cut(s) 310
XagI CCTNNNNNAGG 1 cut(s) 311
XspI CTAG 3 cut(s) 171, 287, 319
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.