RchiOBHm_Chr7g0177561

Protein of unknown function (DUF789)

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
Physical Location & Seq
Reverse (-)
474211 .. 480435
6225 bp
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UTR
Exon/CDS
Intron
PRQ15817

Sequence Viewer

Length: 3474 bp
ATGCATTGTGCCCTTCCAAGAGCTAATAGTGATTTCCAGAAAGGTGCAGACAGAGGAAGAGATTCATTATCAAGGAAAGAACAAAGTAGTTTCAGGATATCTTCAGAGGAATGTGAAGTGCCTTCTGTCACATGGAGGAACTCCGATCATAGGTGTGCTATCTTTAAATTCCTTTCCCTTGAACCTGACGGACAATGGAGAATTGTGGCACTACCGTTGCAATGTAATGATAATATAAATAACTTGGTATCGGATGCTGTGGTGAATATGGAAAGTCTTCGTCTTGTTTACTCACCACCGATTAGTCATTTCAAGTTTAATCGACAGAAGATGCAGAAGGGTCCTCCCATGGATGTTGCTTATTCAGTCAAGTCATTTACAAATAGAAGATTTACTGGTTCAACTATGAGACACCAATATCGAAATAAGACCTTAGTAAATAAAGCTACCAAATGGAATGTTTCCAAAAAATTTCAGAAGTCATTAACCTCCAATGATCCCTCAGCTATGATCCTAAATGATTCTAATACTATTAAATCCTCAGATGTGGTTAGTAATAGAAAAATAGACGGCAATGTGAAGAGAAGTTCAAGAAAGAAGAGTAGAAAGAAGGGAAAGCAGAGCAAGAAAGTTTCATGCAATGTTGGCTCTACTGACCACGAAGTGATTTCTGAGGAATATGGCAATGTAAGCTCAGCTTCTGAAACCTGTGGTAACAAGGACGGGGATGGACCAGCACCATCTTCAACTGCACCAGAAATTTCATTGCTAGATTCTAAGAATTCCAGTGATGAGGTAGGCACTGTGAGTAATTTTGAAAATCATATTGTACTGGAAGACTCTGCGTTTCCCATCTTAGATGGGGTGGAGGCTATTCAGCGTACAAAGGCAAGCATTTACAATGATCTCTATACCAAAGGTTACTCTGAGATGCATGACTCCTACGTTTTGGATTCAATTTCAATTGGCTCAAACAGTGATGGTAGTACTAATCTTGGTCATGACGAAAAACATGCTGAGAAGGAAATGTACAACACAGATATATCTGACCCAGCGGATTTGAGTTCTAGAAAGGGATATTTTACTCGTCAAAGGTCACTGAATGATGTTGTAAACACCTATAATCACACTGAGGACGCAGGGCAGGGTACTCATGATTTTGGCAGTAGTAGTGACATGAAATTTGTTGTGCCTAACAAGAGAAGTAGACAAAACAAAGTAGGACAACGGAGTGCAAATGTTCCCAAATCTGGTAGTGTTGGGAATATGCGTACAGGGGTCTGGCAAAGGGTCCTGAAGAATGATGCCAATGATTGCACTGGTGAATTGAAGAAAGCAAGTTCTGTTTACTCAAGGCTTGATCTCCCTTTGAGAGGGGCTCCCATGCTCAATAAAACCTGCAATGCTGTTGATGTTAATGTCTTTTTGAAGAGTGAAAATAGGAAACAGCAAAAAGATAAGGTCTCAAAAAAGTTGAAAAGAAAAAATGCTCCAGCATTGAAACGAGAATACAATTGTTATTCCAGGAAGGGATCTCATGCTAGCTTGGCTGGCTCAGATGGTTCTTTGAAGCTTCGGATGGATCAGAGTGATATATCAGATATCTTGTCTCAGGCGAAGGACAAGAAACCTAGTCGTCCAACGGCTGGATTCCAGAGCAGAAAAGTAGAATGCATGAACTCCGTATCAGTTCAAAGCATGCAACTCTGTCCAAATGAGATTGGTCATCTTGAAAATGTGTGTAAAACCGTCTCAGGCATGAAGAATCAAAATGTAGGAAATCAGGATGGCTCAATGCAAAAAACATGCAATTCCTGGAAGGAACCAAGTCTGCTTCAGGTGCAATCTTCAGTCTACCTTCCTCATCTACTTCATGATGCAGCAAGTCAAGAAGTACAGAGACAAATCCCTCTTGCAGAAAGCAGCAAGCAAAACCGGAGTAGTTCTGGATCTCTTACACACAAGTGGATGCCAATCGGGTTGAAGGACTCTGAGTTGGCAGGCTCTGCTAGATCTGAGAGTTCATCGCTTGAACATTCTGATGAGGGAGCTTCTAAGAGATGGACGATTAAAGACACTGTTAAAGGCAATGTGGTTTCTAAAGCTGCAGTTGAGTCCATGGCTCAGGGTTCTGGACATGTAACTCGTTCTTCTGATGACACAGAGGGCAGGCTTCCTACATCAAATGCAGTTGAAGAGGTGACCAACAACAAGCTTCATGCAGCTAACTATGTGAATAGTTATGATGTATCCAAAGGTCTAAATGCTTTTGAAGCTTATTCAAACAGAGTATTAGAAGCAGTAAATAATGCTTGTAGGGCACAGCTGGCATCTGAAGCTGTTCAAATGACCAGTGGTCATCCAATTGCTGAATTTGAAAGACTTCTGTATTATTCATCTCCCGTTATCCATCAATCACCTAGCCACACAAGTTGTCACACTTGCTGTCCATGCAACCAGGTTGACCAGGTTGGTGGTGTGTCATTGTGCAGACATGAGACACCAAATATCACTTTAGGATGCCTATGGGAGTGGTATGAGAAATATGGGAGCTATGGGCTGGAAATAAGGGCTGAGGAACCTGGGAGTCCAAAGAGATTGGGTGCTGATCGTTTAGCATTTCGTGCTTATTTTGTCCCTTATTTGTCAGGAATTCAGCTTTTCAGGAATGTTAGGAGTACTGGTACTGGAGATGTTGACAATAGACTTCATAATCATCAAGTGTTAAGCTCATGCTGGAGTGGTGAGATATCCAGAAAATCCTCTAGTATTGGTAGTCTTCCAATATATTCACTACTTTTTTCTCATCTTGATTGCAAGGAAGATGCAGTCATCCCACCACTTGTAAACGAACTGGGTATTCCAGAAGCTTTTGCCAAAGATGTACCTGTTCAATCAGCTGACACAACAGGTTTCAGTGATTTAGAGCTACTTTTAGAATATTTTGAATATGAACAACCTCAACAAAGACGACCTCTATATGACAAGATAAAGGAGCTGGTTAGAGGTGATGGACATTCACATTCAAAAGTGTATGGCGATCCAACTACACTAGACTCTATAAATCTAAATGATCTACATCCCAGATCTTGGTATTCAGTGGCATGGTATCCTATTTATAGGATACCTGATGGTAACTTCCGTGCAGCATTTTTGACCTACCATTCACTTGGTTGTCTGGTTCGTAGAAATGCCAACTTTGAGTCTCGTAGTGTGGATGACTGTATTGTATCTCCAGTTGTGGGTCTTCAGAGTTACAACGCTCAGAGTGAATGCTGGTTCCAGTTAAGGCCCTCATCAGCACCAGCACAGACAACATTATCAAATTTTAACCCTTGTGAAATACTGGAGGAGCGTTTGAGGACACTTGAGGAGACGGCATCTCTTGTGTCAAGAGCTGTTGTGAGCAAAGGAAGTATGACATCTGTAAACAGGCATCCAGACTATGAGTTCTTCCTCTCTAGGCGGCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1157

Amino Acids

128.65

Weight (kDa)

8.66

Isoelectric Point (pI)

48.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 790 - 1152 8.8e-64 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1406
AccB7I CCANNNNNTGG 2 cut(s) 1646, 3090
AccI GTMKAC 2 cut(s) 1207, 1854
AciI CCGC 2 cut(s) 1055, 3466
AclWI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
AcsI RAATTY 8 cut(s) 167, 470, 759, 781, 1181, 2372, 2652, 3325
AcuI CTGAAG 6 cut(s) 87, 1316, 1820, 1833, 2355, 3233
AdeI CACNNNGTG 1 cut(s) 664
AfiI CCNNNNNNNGG 6 cut(s) 150, 1250, 1373, 1646, 3090, 3242
AflIII ACRYGT 1 cut(s) 2137
AhdI GACNNNNNGTC 1 cut(s) 2355
AjnI CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
AleI CACNNNNGTG 1 cut(s) 1963
Alw26I GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3368
AlwI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
AlwNI CAGNNNCTG 2 cut(s) 701, 2006
AoxI GGCC 1 cut(s) 3290
ApeKI GCWGC 5 cut(s) 1880, 1923, 2105, 2222, 3146
ApoI RAATTY 8 cut(s) 167, 470, 759, 781, 1181, 2372, 2652, 3325
ArsI GACNNNNNNTTYG 2 cut(s) 1166, 1198
Asp700I GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
AspLEI GCGC 1 cut(s) 3471
AspS9I GGNCC 4 cut(s) 341, 731, 1291, 3291
AsuHPI GGTGA 7 cut(s) 274, 285, 1334, 2212, 2409, 2756, 3020
AsuNHI GCTAGC 1 cut(s) 1541
AvaII GGWCC 3 cut(s) 341, 731, 1291
BaeGI GKGCMC 2 cut(s) 13, 2323
BanII GRGCYC 1 cut(s) 1381
BarI GAAGNNNNNNTAC 2 cut(s) 1013, 1045
BbsI GAAGAC 4 cut(s) 269, 843, 2771, 3239
BbvCI CCTCAGC 2 cut(s) 502, 2574
BbvI GCAGC 5 cut(s) 1892, 1935, 2092, 2234, 3158
BceAI ACGGC 3 cut(s) 586, 1659, 3393
BcgI CGANNNNNNTGC 2 cut(s) 995, 1029
BciT130I CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BciVI GTATCC 3 cut(s) 2260, 3117, 3120
BcoDI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3368
BfmI CTRYAG 1 cut(s) 2106
BfoI RGCGCY 1 cut(s) 3472
BfuAI ACCTGC 1 cut(s) 1406
BfuI GTATCC 3 cut(s) 2260, 3117, 3120
BglII AGATCT 2 cut(s) 2012, 3086
BisI GCNGC 6 cut(s) 1881, 1924, 2106, 2223, 3147, 3467
BlpI GCTNAGC 1 cut(s) 694
BlsI GCNGC 6 cut(s) 1882, 1925, 2107, 2224, 3148, 3468
BmcAI AGTACT 2 cut(s) 988, 2680
Bme1390I CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
Bme18I GGWCC 3 cut(s) 341, 731, 1291
BmeRI GACNNNNNGTC 1 cut(s) 2355
BmgT120I GGNCC 4 cut(s) 341, 731, 1291, 3291
BmiI GGNNCC 6 cut(s) 342, 1292, 1380, 1824, 2580, 3281
BmrFI CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BmrI ACTGGG 1 cut(s) 2864
BmtI GCTAGC 1 cut(s) 1545
BmuI ACTGGG 1 cut(s) 2864
BpiI GAAGAC 4 cut(s) 269, 843, 2771, 3239
BplI GAGNNNNNCTC 2 cut(s) 1363, 1395
BpmI CTGGAG 5 cut(s) 1476, 2709, 2758, 3219, 3368
Bpu10I CCTNAGC 3 cut(s) 502, 2124, 2574
Bpu1102I GCTNAGC 1 cut(s) 694
BpuEI CTTGAG 2 cut(s) 1336, 3389
BsaBI GATNNNNATC 2 cut(s) 1973, 3078
BsaI GGTCTC 1 cut(s) 1468
BsaJI CCNNGG 3 cut(s) 348, 2118, 2582
BsaWI WCCGGW 1 cut(s) 1935
BsaXI ACNNNNNCTCC 2 cut(s) 2668, 2698
Bsc4I CCNNNNNNNGG 6 cut(s) 150, 1250, 1373, 1646, 3090, 3242
Bse3DI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 1408, 2095
Bse8I GATNNNNATC 2 cut(s) 1973, 3078
BseBI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BseDI CCNNGG 3 cut(s) 348, 2118, 2582
BseJI GATNNNNATC 2 cut(s) 1973, 3078
BseLI CCNNNNNNNGG 6 cut(s) 150, 1250, 1373, 1646, 3090, 3242
BseMI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 1408, 2095
BseRI GAGGAG 2 cut(s) 3365, 3386
BseSI GKGCMC 2 cut(s) 13, 2323
BseXI GCAGC 5 cut(s) 1892, 1935, 2092, 2234, 3158
BseYI CCCAGC 1 cut(s) 1051
BsgI GTGCAG 4 cut(s) 66, 735, 2509, 3165
BshFI GGCC 1 cut(s) 3292
BsiSI CCGG 1 cut(s) 1936
BslFI GGGAC 1 cut(s) 2621
BslI CCNNNNNNNGG 6 cut(s) 150, 1250, 1373, 1646, 3090, 3242
BsmAI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3368
BsmBI CGTCTC 2 cut(s) 1756, 3368
BsmFI GGGAC 1 cut(s) 2621
BsmI GAATGC 2 cut(s) 1676, 3278
BsnI GGCC 1 cut(s) 3292
Bso31I GGTCTC 1 cut(s) 1468
Bsp1286I GDGCHC 3 cut(s) 13, 1381, 2323
Bsp1407I TGTACA 1 cut(s) 1029
Bsp1720I GCTNAGC 1 cut(s) 694
Bsp19I CCATGG 2 cut(s) 348, 2118
BspACI CCGC 2 cut(s) 1055, 3466
BspANI GGCC 1 cut(s) 3292
BspHI TCATGA 3 cut(s) 1000, 1153, 1873
BspLI GGNNCC 6 cut(s) 342, 1292, 1380, 1824, 2580, 3281
BspMAI CTGCAG 1 cut(s) 2110
BspMI ACCTGC 1 cut(s) 1406
BspOI GCTAGC 1 cut(s) 1545
BspPI GGATC 6 cut(s) 491, 505, 1540, 1590, 1957, 3035
BspTNI GGTCTC 1 cut(s) 1468
BsrDI GCAATG 7 cut(s) 227, 580, 646, 691, 764, 1408, 2095
BsrGI TGTACA 1 cut(s) 1029
BssECI CCNNGG 3 cut(s) 348, 2118, 2582
BssT1I CCWWGG 2 cut(s) 348, 2118
Bst2UI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
Bst4CI ACNGT 6 cut(s) 216, 805, 977, 1750, 2080, 3224
Bst6I CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
BstAPI GCANNNNNTGC 2 cut(s) 2006, 2624
BstAUI TGTACA 1 cut(s) 1029
BstC8I GCNNGC 8 cut(s) 892, 1543, 1552, 1700, 1928, 2002, 2171, 2328
BstDSI CCRYGG 2 cut(s) 348, 2118
BstEII GGTNACC 1 cut(s) 2200
BstENI CCTNNNNNAGG 1 cut(s) 1371
BstH2I RGCGCY 1 cut(s) 3472
BstHHI GCGC 1 cut(s) 3471
BstMAI GTCTC 8 cut(s) 403, 1468, 1614, 1756, 1894, 2492, 3210, 3368
BstNI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
BstNSI RCATGY 4 cut(s) 1016, 1702, 1809, 2141
BstPI GGTNACC 1 cut(s) 2200
BstSCI CCNGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
BstSFI CTRYAG 1 cut(s) 2106
BstSLI GKGCMC 2 cut(s) 13, 2323
BstV1I GCAGC 5 cut(s) 1892, 1935, 2092, 2234, 3158
BstV2I GAAGAC 4 cut(s) 269, 843, 2771, 3239
BstX2I RGATCY 4 cut(s) 1532, 1949, 2012, 3086
BstXI CCANNNNNNTGG 2 cut(s) 2474, 3170
BstYI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
BsuI GTATCC 3 cut(s) 2260, 3117, 3120
BsuRI GGCC 1 cut(s) 3292
BtgI CCRYGG 2 cut(s) 348, 2118
BtgZI GCGATG 1 cut(s) 2010
BveI ACCTGC 1 cut(s) 1406
Cac8I GCNNGC 8 cut(s) 892, 1543, 1552, 1700, 1928, 2002, 2171, 2328
CaiI CAGNNNCTG 2 cut(s) 701, 2006
CciI TCATGA 3 cut(s) 1000, 1153, 1873
CfoI GCGC 1 cut(s) 3471
Cfr13I GGNCC 4 cut(s) 341, 731, 1291, 3291
CseI GACGC 1 cut(s) 1145
CsiI ACCWGGT 2 cut(s) 2457, 2466
CspCI CAANNNNNGTGG 2 cut(s) 2414, 2449
DraI TTTAAA 1 cut(s) 166
DraIII CACNNNGTG 1 cut(s) 664
DriI GACNNNNNGTC 1 cut(s) 2355
Eam1104I CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
Eam1105I GACNNNNNGTC 1 cut(s) 2355
EarI CTCTTC 5 cut(s) 52, 575, 593, 1424, 2190
Eco130I CCWWGG 2 cut(s) 348, 2118
Eco24I GRGCYC 1 cut(s) 1381
Eco31I GGTCTC 1 cut(s) 1468
Eco32I GATATC 3 cut(s) 99, 1603, 2751
Eco47I GGWCC 3 cut(s) 341, 731, 1291
Eco57I CTGAAG 6 cut(s) 87, 1316, 1820, 1833, 2355, 3233
Eco91I GGTNACC 1 cut(s) 2200
EcoNI CCTNNNNNAGG 1 cut(s) 1371
EcoO109I RGGNCCY 3 cut(s) 341, 1291, 3291
EcoO65I GGTNACC 1 cut(s) 2200
EcoRI GAATTC 2 cut(s) 781, 2652
EcoRII CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
EcoRV GATATC 3 cut(s) 99, 1603, 2751
EcoT14I CCWWGG 2 cut(s) 348, 2118
EcoT22I ATGCAT 3 cut(s) 6, 936, 1676
EcoT38I GRGCYC 1 cut(s) 1381
ErhI CCWWGG 2 cut(s) 348, 2118
Esp3I CGTCTC 2 cut(s) 1756, 3368
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FaqI GGGAC 1 cut(s) 2621
FblI GTMKAC 2 cut(s) 1207, 1854
Fnu4HI GCNGC 6 cut(s) 1881, 1924, 2106, 2223, 3147, 3467
FriOI GRGCYC 1 cut(s) 1381
Fsp4HI GCNGC 6 cut(s) 1881, 1924, 2106, 2223, 3147, 3467
GlaI GCGC 1 cut(s) 3470
GluI GCNGC 6 cut(s) 1881, 1924, 2106, 2223, 3147, 3467
GsaI CCCAGC 1 cut(s) 1055
GsuI CTGGAG 5 cut(s) 1476, 2709, 2758, 3219, 3368
HaeII RGCGCY 1 cut(s) 3472
HaeIII GGCC 1 cut(s) 3292
HapII CCGG 1 cut(s) 1936
HgaI GACGC 1 cut(s) 1145
HhaI GCGC 1 cut(s) 3471
Hin6I GCGC 1 cut(s) 3469
HinP1I GCGC 1 cut(s) 3469
HincII GTYRAC 2 cut(s) 2464, 2698
HindII GTYRAC 2 cut(s) 2464, 2698
HindIII AAGCTT 4 cut(s) 1571, 2213, 2274, 2868
HpaII CCGG 1 cut(s) 1936
HphI GGTGA 7 cut(s) 274, 285, 1334, 2212, 2409, 2756, 3020
Hpy166II GTNNAC 9 cut(s) 289, 1114, 1208, 1348, 1855, 2464, 2698, 2848, 3430
Hpy8I GTNNAC 9 cut(s) 289, 1114, 1208, 1348, 1855, 2464, 2698, 2848, 3430
HpyCH4III ACNGT 6 cut(s) 216, 805, 977, 1750, 2080, 3224
HpyCH4IV ACGT 1 cut(s) 945
HpySE526I ACGT 1 cut(s) 945
HspAI GCGC 1 cut(s) 3469
LmnI GCTCC 6 cut(s) 1384, 1495, 2048, 2550, 2995, 3352
Lsp1109I GCAGC 5 cut(s) 1892, 1935, 2092, 2234, 3158
MabI ACCWGGT 2 cut(s) 2457, 2466
MaeII ACGT 1 cut(s) 945
MfeI CAATTG 3 cut(s) 963, 1513, 2364
MflI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
MhlI GDGCHC 3 cut(s) 13, 1381, 2323
MlyI GAGTC 7 cut(s) 833, 932, 1982, 2123, 2596, 3050, 3212
MmeI TCCRAC 2 cut(s) 1664, 3068
Mph1103I ATGCAT 3 cut(s) 6, 936, 1676
MroXI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
MslI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
MspA1I CMGCKG 3 cut(s) 1055, 2326, 2900
MspI CCGG 1 cut(s) 1936
MspR9I CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
MunI CAATTG 3 cut(s) 963, 1513, 2364
Mva1269I GAATGC 2 cut(s) 1676, 3278
MvaI CCWGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
NcoI CCATGG 2 cut(s) 348, 2118
NheI GCTAGC 1 cut(s) 1541
NlaIV GGNNCC 6 cut(s) 342, 1292, 1380, 1824, 2580, 3281
NmuCI GTSAC 5 cut(s) 127, 1095, 1172, 2200, 2435
NsiI ATGCAT 3 cut(s) 6, 936, 1676
NspI RCATGY 4 cut(s) 1016, 1702, 1809, 2141
OliI CACNNNNGTG 1 cut(s) 1963
PaeI GCATGC 1 cut(s) 1702
PagI TCATGA 3 cut(s) 1000, 1153, 1873
PciI ACATGT 1 cut(s) 2137
PctI GAATGC 2 cut(s) 1676, 3278
PdmI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
PfeI GAWTC 6 cut(s) 62, 521, 773, 953, 1650, 1765
PflMI CCANNNNNTGG 2 cut(s) 1646, 3090
PfoI TCCNGGA 2 cut(s) 1523, 1814
PkrI GCNGC 6 cut(s) 1882, 1925, 2107, 2224, 3148, 3468
PleI GAGTC 7 cut(s) 833, 932, 1982, 2122, 2595, 3050, 3211
PpsI GAGTC 7 cut(s) 833, 932, 1982, 2122, 2595, 3050, 3211
PpuMI RGGWCCY 2 cut(s) 341, 1291
PscI ACATGT 1 cut(s) 2137
Psp5II RGGWCCY 2 cut(s) 341, 1291
Psp6I CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
PspEI GGTNACC 1 cut(s) 2200
PspFI CCCAGC 1 cut(s) 1051
PspGI CCWGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
PspN4I GGNNCC 6 cut(s) 342, 1292, 1380, 1824, 2580, 3281
PspPI GGNCC 4 cut(s) 341, 731, 1291, 3291
PspPPI RGGWCCY 2 cut(s) 341, 1291
PstI CTGCAG 1 cut(s) 2110
PstNI CAGNNNCTG 2 cut(s) 701, 2006
PsuI RGATCY 4 cut(s) 1532, 1949, 2012, 3086
PvuII CAGCTG 2 cut(s) 2326, 2900
RseI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
SatI GCNGC 6 cut(s) 1881, 1924, 2106, 2223, 3147, 3467
Sau96I GGNCC 4 cut(s) 341, 731, 1291, 3291
ScaI AGTACT 2 cut(s) 988, 2680
SchI GAGTC 7 cut(s) 833, 932, 1982, 2123, 2596, 3050, 3212
ScrFI CCNGG 5 cut(s) 1525, 1816, 2459, 2468, 2583
SduI GDGCHC 3 cut(s) 13, 1381, 2323
SexAI ACCWGGT 2 cut(s) 2457, 2466
SfcI CTRYAG 1 cut(s) 2106
SinI GGWCC 3 cut(s) 341, 731, 1291
SmiMI CAYNNNNRTG 3 cut(s) 153, 1963, 2040
SmlI CTYRAG 2 cut(s) 1351, 3368
SmoI CTYRAG 2 cut(s) 1351, 3368
SphI GCATGC 1 cut(s) 1702
SsiI CCGC 2 cut(s) 1055, 3466
SspI AATATT 1 cut(s) 2942
StyD4I CCNGG 5 cut(s) 1523, 1814, 2457, 2466, 2581
StyI CCWWGG 2 cut(s) 348, 2118
TaaI ACNGT 6 cut(s) 216, 805, 977, 1750, 2080, 3224
TaiI ACGT 1 cut(s) 948
TaqI TCGA 2 cut(s) 322, 421
TatI WGTACW 5 cut(s) 829, 986, 1029, 1894, 2678
TauI GCSGC 1 cut(s) 3469
TfiI GAWTC 6 cut(s) 62, 521, 773, 953, 1650, 1765
TseFI GTSAC 5 cut(s) 127, 1095, 1172, 2200, 2435
TseI GCWGC 5 cut(s) 1880, 1923, 2105, 2222, 3146
Tsp45I GTSAC 5 cut(s) 127, 1095, 1172, 2200, 2435
TspGWI ACGGA 4 cut(s) 204, 1243, 1672, 3131
Van91I CCANNNNNTGG 2 cut(s) 1646, 3090
VpaK11BI GGWCC 3 cut(s) 341, 731, 1291
XagI CCTNNNNNAGG 1 cut(s) 1371
XapI RAATTY 8 cut(s) 167, 470, 759, 781, 1181, 2372, 2652, 3325
XbaI TCTAGA 1 cut(s) 1067
XceI RCATGY 4 cut(s) 1016, 1702, 1809, 2141
XmiI GTMKAC 2 cut(s) 1207, 1854
XmnI GAANNNNTTC 4 cut(s) 61, 276, 2340, 2382
ZrmI AGTACT 2 cut(s) 988, 2680
Zsp2I ATGCAT 3 cut(s) 6, 936, 1676
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.