Protein of unknown function (DUF789)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| DUF789 | PF05623 | 809 - 1005 | 7.9e-40 | Protein of unknown function (DUF789) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 99 |
| AccB1I | GGYRCC | 1 cut(s) | 99 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2604 |
| AccI | GTMKAC | 1 cut(s) | 940 |
| AciI | CCGC | 3 cut(s) | 64, 133, 3025 |
| AclWI | GGATC | 4 cut(s) | 1273, 1323, 1690, 2549 |
| AcsI | RAATTY | 4 cut(s) | 558, 580, 914, 2105 |
| AcuI | CTGAAG | 4 cut(s) | 1049, 1553, 2088, 2744 |
| AcyI | GRCGYC | 2 cut(s) | 45, 60 |
| AdeI | CACNNNGTG | 1 cut(s) | 463 |
| AfaI | GTAC | 8 cut(s) | 32, 101, 630, 787, 883, 1006, 1629, 2791 |
| AfeI | AGCGCT | 1 cut(s) | 107 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 54, 55, 865, 983, 2604, 2753, 2850 |
| AflIII | ACRYGT | 3 cut(s) | 12, 27, 1870 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2088 |
| AjiI | CACGTC | 1 cut(s) | 13 |
| AjnI | CCWGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| AleI | CACNNNNGTG | 1 cut(s) | 1696 |
| Alw26I | GTCTC | 8 cut(s) | 36, 1201, 1347, 1489, 1627, 2225, 2721, 2927 |
| AlwI | GGATC | 4 cut(s) | 1273, 1323, 1690, 2549 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 500 |
| Aor51HI | AGCGCT | 1 cut(s) | 107 |
| AoxI | GGCC | 1 cut(s) | 2852 |
| ApeKI | GCWGC | 8 cut(s) | 21, 1392, 1435, 1613, 1656, 1838, 1955, 2657 |
| ApoI | RAATTY | 4 cut(s) | 558, 580, 914, 2105 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 74, 106, 899, 931, 1860, 1892 |
| AseI | ATTAAT | 1 cut(s) | 1149 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2073, 2115 |
| Asp718I | GGTACC | 1 cut(s) | 99 |
| AspLEI | GCGC | 2 cut(s) | 108, 3030 |
| AspS9I | GGNCC | 3 cut(s) | 530, 1024, 2853 |
| AsuHPI | GGTGA | 6 cut(s) | 92, 142, 1067, 1360, 2142, 2534 |
| AsuNHI | GCTAGC | 1 cut(s) | 1274 |
| AvaII | GGWCC | 2 cut(s) | 530, 1024 |
| BaeGI | GKGCMC | 1 cut(s) | 2056 |
| BanI | GGYRCC | 1 cut(s) | 99 |
| BbsI | GAAGAC | 3 cut(s) | 231, 642, 2750 |
| BbvCI | CCTCAGC | 2 cut(s) | 2307, 2857 |
| BbvI | GCAGC | 8 cut(s) | 8, 1404, 1447, 1625, 1668, 1825, 1967, 2669 |
| BceAI | ACGGC | 4 cut(s) | 173, 385, 1392, 2952 |
| BciT130I | CCWGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| BciVI | GTATCC | 3 cut(s) | 1993, 2631, 2634 |
| BcoDI | GTCTC | 8 cut(s) | 36, 1201, 1347, 1489, 1627, 2225, 2721, 2927 |
| BfaI | CTAG | 8 cut(s) | 569, 1275, 1365, 1743, 2154, 2567, 3021, 3031 |
| BfmI | CTRYAG | 1 cut(s) | 1839 |
| BfoI | RGCGCY | 2 cut(s) | 109, 3031 |
| BfuI | GTATCC | 3 cut(s) | 1993, 2631, 2634 |
| BglII | AGATCT | 2 cut(s) | 1745, 2600 |
| BisI | GCNGC | 9 cut(s) | 22, 1393, 1436, 1614, 1657, 1839, 1956, 2658, 3026 |
| BlpI | GCTNAGC | 1 cut(s) | 493 |
| BlsI | GCNGC | 9 cut(s) | 23, 1394, 1437, 1615, 1658, 1840, 1957, 2659, 3027 |
| BmcAI | AGTACT | 1 cut(s) | 787 |
| Bme1390I | CCNGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| Bme18I | GGWCC | 2 cut(s) | 530, 1024 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2088 |
| BmgBI | CACGTC | 1 cut(s) | 13 |
| BmgT120I | GGNCC | 3 cut(s) | 530, 1024, 2853 |
| BmiI | GGNNCC | 7 cut(s) | 101, 178, 1113, 1557, 2189, 2313, 2842 |
| BmrFI | CCNGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| BmrI | ACTGGG | 2 cut(s) | 64, 2378 |
| BmtI | GCTAGC | 1 cut(s) | 1278 |
| BmuI | ACTGGG | 2 cut(s) | 64, 2378 |
| BpiI | GAAGAC | 3 cut(s) | 231, 642, 2750 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1096, 1128 |
| BpmI | CTGGAG | 4 cut(s) | 1209, 1690, 2730, 2927 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1857, 2307, 2775, 2857 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 493 |
| BpuEI | CTTGAG | 2 cut(s) | 1069, 2948 |
| BsaAI | YACGTR | 1 cut(s) | 30 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1706, 2592 |
| BsaHI | GRCGYC | 2 cut(s) | 45, 60 |
| BsaI | GGTCTC | 1 cut(s) | 1201 |
| BsaJI | CCNNGG | 2 cut(s) | 1851, 2315 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 142, 172 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 54, 55, 865, 983, 2604, 2753, 2850 |
| Bse3DI | GCAATG | 7 cut(s) | 190, 379, 445, 490, 563, 1757, 1828 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1706, 2592 |
| BseBI | CCWGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| BseDI | CCNNGG | 2 cut(s) | 1851, 2315 |
| BseJI | GATNNNNATC | 2 cut(s) | 1706, 2592 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 54, 55, 865, 983, 2604, 2753, 2850 |
| BseMI | GCAATG | 7 cut(s) | 190, 379, 445, 490, 563, 1757, 1828 |
| BseRI | GAGGAG | 3 cut(s) | 145, 2924, 2945 |
| BseSI | GKGCMC | 1 cut(s) | 2056 |
| BseXI | GCAGC | 8 cut(s) | 8, 1404, 1447, 1625, 1668, 1825, 1967, 2669 |
| BsgI | GTGCAG | 4 cut(s) | 534, 2242, 2676, 2832 |
| BshFI | GGCC | 1 cut(s) | 2854 |
| BshNI | GGYRCC | 1 cut(s) | 99 |
| BsiSI | CCGG | 1 cut(s) | 180 |
| BsiWI | CGTACG | 1 cut(s) | 30 |
| BslFI | GGGAC | 2 cut(s) | 23, 71 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 54, 55, 865, 983, 2604, 2753, 2850 |
| BsmAI | GTCTC | 8 cut(s) | 36, 1201, 1347, 1489, 1627, 2225, 2721, 2927 |
| BsmBI | CGTCTC | 3 cut(s) | 36, 1489, 2927 |
| BsmFI | GGGAC | 2 cut(s) | 23, 71 |
| BsmI | GAATGC | 3 cut(s) | 1409, 1576, 2839 |
| BsnI | GGCC | 1 cut(s) | 2854 |
| Bso31I | GGTCTC | 1 cut(s) | 1201 |
| Bsp1286I | GDGCHC | 1 cut(s) | 2056 |
| Bsp143I | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 493 |
| Bsp19I | CCATGG | 1 cut(s) | 1851 |
| BspACI | CCGC | 3 cut(s) | 64, 133, 3025 |
| BspANI | GGCC | 1 cut(s) | 2854 |
| BspHI | TCATGA | 2 cut(s) | 799, 886 |
| BspLI | GGNNCC | 7 cut(s) | 101, 178, 1113, 1557, 2189, 2313, 2842 |
| BspMAI | CTGCAG | 1 cut(s) | 1843 |
| BspOI | GCTAGC | 1 cut(s) | 1278 |
| BspPI | GGATC | 4 cut(s) | 1273, 1323, 1690, 2549 |
| BspT107I | GGYRCC | 1 cut(s) | 99 |
| BspTNI | GGTCTC | 1 cut(s) | 1201 |
| BsrDI | GCAATG | 7 cut(s) | 190, 379, 445, 490, 563, 1757, 1828 |
| BssECI | CCNNGG | 2 cut(s) | 1851, 2315 |
| BssMI | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| BssNI | GRCGYC | 2 cut(s) | 45, 60 |
| BssT1I | CCWWGG | 1 cut(s) | 1851 |
| Bst2UI | CCWGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| Bst4CI | ACNGT | 6 cut(s) | 329, 604, 776, 1483, 1813, 2735 |
| Bst6I | CTCTTC | 4 cut(s) | 374, 392, 1157, 1923 |
| BstACI | GRCGYC | 2 cut(s) | 45, 60 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1739 |
| BstBAI | YACGTR | 1 cut(s) | 30 |
| BstDSI | CCRYGG | 1 cut(s) | 1851 |
| BstH2I | RGCGCY | 2 cut(s) | 109, 3031 |
| BstHHI | GCGC | 2 cut(s) | 108, 3030 |
| BstKTI | GATC | 9 cut(s) | 706, 1096, 1268, 1318, 1685, 1748, 2557, 2590, 2603 |
| BstMAI | GTCTC | 8 cut(s) | 36, 1201, 1347, 1489, 1627, 2225, 2721, 2927 |
| BstMBI | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| BstNI | CCWGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| BstNSI | RCATGY | 4 cut(s) | 438, 1435, 1542, 1874 |
| BstSCI | CCNGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| BstSFI | CTRYAG | 1 cut(s) | 1839 |
| BstSLI | GKGCMC | 1 cut(s) | 2056 |
| BstV1I | GCAGC | 8 cut(s) | 8, 1404, 1447, 1625, 1668, 1825, 1967, 2669 |
| BstV2I | GAAGAC | 3 cut(s) | 231, 642, 2750 |
| BstX2I | RGATCY | 4 cut(s) | 1265, 1682, 1745, 2600 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2207, 2681 |
| BstYI | RGATCY | 4 cut(s) | 1265, 1682, 1745, 2600 |
| BsuI | GTATCC | 3 cut(s) | 1993, 2631, 2634 |
| BsuRI | GGCC | 1 cut(s) | 2854 |
| BtgI | CCRYGG | 1 cut(s) | 1851 |
| BtrI | CACGTC | 1 cut(s) | 13 |
| BtsI | GCAGTG | 2 cut(s) | 546, 2820 |
| CaiI | CAGNNNCTG | 1 cut(s) | 500 |
| CciI | TCATGA | 2 cut(s) | 799, 886 |
| CfoI | GCGC | 2 cut(s) | 108, 3030 |
| Cfr13I | GGNCC | 3 cut(s) | 530, 1024, 2853 |
| CseI | GACGC | 3 cut(s) | 53, 68, 878 |
| CsiI | ACCWGGT | 2 cut(s) | 2190, 2199 |
| Csp6I | GTAC | 8 cut(s) | 31, 100, 629, 786, 882, 1005, 1628, 2790 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2147, 2182 |
| CviQI | GTAC | 8 cut(s) | 31, 100, 629, 786, 882, 1005, 1628, 2790 |
| DpnI | GATC | 9 cut(s) | 705, 1095, 1267, 1317, 1684, 1747, 2556, 2589, 2602 |
| DpnII | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| DraIII | CACNNNGTG | 1 cut(s) | 463 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2088 |
| Eam1104I | CTCTTC | 4 cut(s) | 374, 392, 1157, 1923 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2088 |
| EarI | CTCTTC | 4 cut(s) | 374, 392, 1157, 1923 |
| Eco130I | CCWWGG | 1 cut(s) | 1851 |
| Eco31I | GGTCTC | 1 cut(s) | 1201 |
| Eco32I | GATATC | 1 cut(s) | 1336 |
| Eco47I | GGWCC | 2 cut(s) | 530, 1024 |
| Eco47III | AGCGCT | 1 cut(s) | 107 |
| Eco57I | CTGAAG | 4 cut(s) | 1049, 1553, 2088, 2744 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1024, 2853 |
| EcoRI | GAATTC | 1 cut(s) | 580 |
| EcoRII | CCWGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| EcoRV | GATATC | 1 cut(s) | 1336 |
| EcoT14I | CCWWGG | 1 cut(s) | 1851 |
| EcoT22I | ATGCAT | 2 cut(s) | 735, 1409 |
| ErhI | CCWWGG | 1 cut(s) | 1851 |
| Esp3I | CGTCTC | 3 cut(s) | 36, 1489, 2927 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 481, 513 |
| FaqI | GGGAC | 2 cut(s) | 23, 71 |
| FauI | CCCGC | 1 cut(s) | 71 |
| FblI | GTMKAC | 1 cut(s) | 940 |
| Fnu4HI | GCNGC | 9 cut(s) | 22, 1393, 1436, 1614, 1657, 1839, 1956, 2658, 3026 |
| Fsp4HI | GCNGC | 9 cut(s) | 22, 1393, 1436, 1614, 1657, 1839, 1956, 2658, 3026 |
| FspBI | CTAG | 8 cut(s) | 569, 1275, 1365, 1743, 2154, 2567, 3021, 3031 |
| GlaI | GCGC | 2 cut(s) | 107, 3029 |
| GluI | GCNGC | 9 cut(s) | 22, 1393, 1436, 1614, 1657, 1839, 1956, 2658, 3026 |
| GsuI | CTGGAG | 4 cut(s) | 1209, 1690, 2730, 2927 |
| HaeII | RGCGCY | 2 cut(s) | 109, 3031 |
| HaeIII | GGCC | 1 cut(s) | 2854 |
| HapII | CCGG | 1 cut(s) | 180 |
| HgaI | GACGC | 3 cut(s) | 53, 68, 878 |
| HhaI | GCGC | 2 cut(s) | 108, 3030 |
| Hin1I | GRCGYC | 2 cut(s) | 45, 60 |
| Hin6I | GCGC | 2 cut(s) | 106, 3028 |
| HinP1I | GCGC | 2 cut(s) | 106, 3028 |
| HincII | GTYRAC | 1 cut(s) | 2197 |
| HindII | GTYRAC | 1 cut(s) | 2197 |
| HindIII | AAGCTT | 4 cut(s) | 1304, 1946, 2007, 2382 |
| HpaII | CCGG | 1 cut(s) | 180 |
| HphI | GGTGA | 6 cut(s) | 92, 142, 1067, 1360, 2142, 2534 |
| Hpy166II | GTNNAC | 6 cut(s) | 847, 941, 1081, 2197, 2362, 2989 |
| Hpy8I | GTNNAC | 6 cut(s) | 847, 941, 1081, 2197, 2362, 2989 |
| Hpy99I | CGWCG | 2 cut(s) | 173, 176 |
| HpyAV | CCTTC | 8 cut(s) | 71, 403, 814, 1255, 1345, 1546, 1601, 1711 |
| HpyCH4III | ACNGT | 6 cut(s) | 329, 604, 776, 1483, 1813, 2735 |
| HpyCH4IV | ACGT | 4 cut(s) | 12, 29, 69, 744 |
| HpySE526I | ACGT | 4 cut(s) | 12, 29, 69, 744 |
| Hsp92I | GRCGYC | 2 cut(s) | 45, 60 |
| HspAI | GCGC | 2 cut(s) | 106, 3028 |
| KpnI | GGTACC | 1 cut(s) | 103 |
| Kzo9I | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| LmnI | GCTCC | 7 cut(s) | 182, 1117, 1228, 1781, 2283, 2509, 2911 |
| Lsp1109I | GCAGC | 8 cut(s) | 8, 1404, 1447, 1625, 1668, 1825, 1967, 2669 |
| MabI | ACCWGGT | 2 cut(s) | 2190, 2199 |
| MaeI | CTAG | 8 cut(s) | 569, 1275, 1365, 1743, 2154, 2567, 3021, 3031 |
| MaeII | ACGT | 4 cut(s) | 12, 29, 69, 744 |
| MaeIII | GTNAC | 8 cut(s) | 80, 512, 695, 719, 828, 2168, 2242, 2765 |
| MalI | GATC | 9 cut(s) | 705, 1095, 1267, 1317, 1684, 1747, 2556, 2589, 2602 |
| MboI | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| MfeI | CAATTG | 3 cut(s) | 762, 1246, 2097 |
| MflI | RGATCY | 4 cut(s) | 1265, 1682, 1745, 2600 |
| MhlI | GDGCHC | 1 cut(s) | 2056 |
| MlyI | GAGTC | 8 cut(s) | 77, 632, 731, 1715, 1856, 2329, 2564, 2723 |
| MmeI | TCCRAC | 3 cut(s) | 177, 1397, 2582 |
| Mph1103I | ATGCAT | 2 cut(s) | 735, 1409 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2073, 2115 |
| MseI | TTAA | 8 cut(s) | 1149, 1803, 1815, 2406, 2784, 2823, 2849, 2888 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1696, 1773 |
| MspA1I | CMGCKG | 2 cut(s) | 2059, 2414 |
| MspI | CCGG | 1 cut(s) | 180 |
| MspR9I | CCNGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| MunI | CAATTG | 3 cut(s) | 762, 1246, 2097 |
| Mva1269I | GAATGC | 3 cut(s) | 1409, 1576, 2839 |
| MvaI | CCWGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| NcoI | CCATGG | 1 cut(s) | 1851 |
| NdeII | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| NheI | GCTAGC | 1 cut(s) | 1274 |
| NlaIV | GGNNCC | 7 cut(s) | 101, 178, 1113, 1557, 2189, 2313, 2842 |
| NmuCI | GTSAC | 4 cut(s) | 80, 828, 2168, 2242 |
| NsiI | ATGCAT | 2 cut(s) | 735, 1409 |
| NspI | RCATGY | 4 cut(s) | 438, 1435, 1542, 1874 |
| OliI | CACNNNNGTG | 1 cut(s) | 1696 |
| PaeI | GCATGC | 2 cut(s) | 438, 1435 |
| PagI | TCATGA | 2 cut(s) | 799, 886 |
| PciI | ACATGT | 1 cut(s) | 1870 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 66 |
| PctI | GAATGC | 3 cut(s) | 1409, 1576, 2839 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2073, 2115 |
| PfeI | GAWTC | 5 cut(s) | 317, 572, 752, 1383, 1498 |
| Pfl23II | CGTACG | 1 cut(s) | 30 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2604 |
| PfoI | TCCNGGA | 1 cut(s) | 1547 |
| PkrI | GCNGC | 9 cut(s) | 23, 1394, 1437, 1615, 1658, 1840, 1957, 2659, 3027 |
| PleI | GAGTC | 8 cut(s) | 77, 632, 731, 1715, 1855, 2328, 2564, 2722 |
| PpsI | GAGTC | 8 cut(s) | 77, 632, 731, 1715, 1855, 2328, 2564, 2722 |
| Ppu21I | YACGTR | 1 cut(s) | 30 |
| PpuMI | RGGWCCY | 1 cut(s) | 1024 |
| PscI | ACATGT | 1 cut(s) | 1870 |
| PshBI | ATTAAT | 1 cut(s) | 1149 |
| Psp5II | RGGWCCY | 1 cut(s) | 1024 |
| Psp6I | CCWGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| PspGI | CCWGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| PspLI | CGTACG | 1 cut(s) | 30 |
| PspN4I | GGNNCC | 7 cut(s) | 101, 178, 1113, 1557, 2189, 2313, 2842 |
| PspPI | GGNCC | 3 cut(s) | 530, 1024, 2853 |
| PspPPI | RGGWCCY | 1 cut(s) | 1024 |
| PstI | CTGCAG | 1 cut(s) | 1843 |
| PstNI | CAGNNNCTG | 1 cut(s) | 500 |
| PsuI | RGATCY | 4 cut(s) | 1265, 1682, 1745, 2600 |
| PvuII | CAGCTG | 2 cut(s) | 2059, 2414 |
| RsaI | GTAC | 8 cut(s) | 32, 101, 630, 787, 883, 1006, 1629, 2791 |
| RsaNI | GTAC | 8 cut(s) | 31, 100, 629, 786, 882, 1005, 1628, 2790 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1696, 1773 |
| SaqAI | TTAA | 8 cut(s) | 1149, 1803, 1815, 2406, 2784, 2823, 2849, 2888 |
| SatI | GCNGC | 9 cut(s) | 22, 1393, 1436, 1614, 1657, 1839, 1956, 2658, 3026 |
| Sau3AI | GATC | 9 cut(s) | 703, 1093, 1265, 1315, 1682, 1745, 2554, 2587, 2600 |
| Sau96I | GGNCC | 3 cut(s) | 530, 1024, 2853 |
| ScaI | AGTACT | 1 cut(s) | 787 |
| SchI | GAGTC | 8 cut(s) | 77, 632, 731, 1715, 1856, 2329, 2564, 2723 |
| ScrFI | CCNGG | 4 cut(s) | 1549, 2192, 2201, 2316 |
| SduI | GDGCHC | 1 cut(s) | 2056 |
| SexAI | ACCWGGT | 2 cut(s) | 2190, 2199 |
| SfcI | CTRYAG | 1 cut(s) | 1839 |
| SinI | GGWCC | 2 cut(s) | 530, 1024 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1696, 1773 |
| SmlI | CTYRAG | 2 cut(s) | 1084, 2927 |
| SmoI | CTYRAG | 2 cut(s) | 1084, 2927 |
| SphI | GCATGC | 2 cut(s) | 438, 1435 |
| SsiI | CCGC | 3 cut(s) | 64, 133, 3025 |
| SspI | AATATT | 2 cut(s) | 2456, 2807 |
| SspMI | CTAG | 8 cut(s) | 569, 1275, 1365, 1743, 2154, 2567, 3021, 3031 |
| StyD4I | CCNGG | 4 cut(s) | 1547, 2190, 2199, 2314 |
| StyI | CCWWGG | 1 cut(s) | 1851 |
| TaaI | ACNGT | 6 cut(s) | 329, 604, 776, 1483, 1813, 2735 |
| TaiI | ACGT | 4 cut(s) | 15, 32, 72, 747 |
| TaqI | TCGA | 4 cut(s) | 17, 93, 1256, 1381 |
| TatI | WGTACW | 3 cut(s) | 628, 785, 1627 |
| TauI | GCSGC | 1 cut(s) | 3028 |
| TfiI | GAWTC | 5 cut(s) | 317, 572, 752, 1383, 1498 |
| Tru1I | TTAA | 8 cut(s) | 1149, 1803, 1815, 2406, 2784, 2823, 2849, 2888 |
| Tru9I | TTAA | 8 cut(s) | 1149, 1803, 1815, 2406, 2784, 2823, 2849, 2888 |
| TseFI | GTSAC | 4 cut(s) | 80, 828, 2168, 2242 |
| TseI | GCWGC | 8 cut(s) | 21, 1392, 1435, 1613, 1656, 1838, 1955, 2657 |
| Tsp45I | GTSAC | 4 cut(s) | 80, 828, 2168, 2242 |
| TspGWI | ACGGA | 4 cut(s) | 54, 976, 1405, 2642 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2604 |
| VpaK11BI | GGWCC | 2 cut(s) | 530, 1024 |
| VspI | ATTAAT | 1 cut(s) | 1149 |
| XapI | RAATTY | 4 cut(s) | 558, 580, 914, 2105 |
| XceI | RCATGY | 4 cut(s) | 438, 1435, 1542, 1874 |
| XmiI | GTMKAC | 1 cut(s) | 940 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2073, 2115 |
| XspI | CTAG | 8 cut(s) | 569, 1275, 1365, 1743, 2154, 2567, 3021, 3031 |
| ZrmI | AGTACT | 1 cut(s) | 787 |
| Zsp2I | ATGCAT | 2 cut(s) | 735, 1409 |