Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0003580

Physical Location & Seq

Genomic Coordinates Reverse (-)

27189201 .. 27192104

Gene Structure 2904 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ18771

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2082 bp

ATGACGGACTACCGGATACCTCCCACCATGAATCTCTGGACGGACGACAACGCGTCTCTCATGGAAGCCTTCATGAGCAACTCCGATCTCACCTCCTTCTGGGCCGCCCAGCCGGCCCAGCCCGCAACCCAGCCCGCACATCCCCTCCACCAGCCTCAGTCCTCCGCTTCCACCTCCGACTATCCCCGCCCTCCGGCCGCGCAGTCGCAGTCGCAGTCGCAGCCTCCGCCGCCGCCGGCCGCTGCGCCGTTCAACCAGGAGACGCTTATGCAGCGGCTTCAGGCGCTGATCGAGGGAGCCAGGGAGAGCTGGACCTACGCCATCTTCTGGCAGTCGTCGTACGAGATGTCCGGAGCTTCCGTGCTCGGATGGGGCGAGGGGTTCTACAAGGACGAGAGGGACAAGGTGAAAGCGAAGCCCAAAACGACGACGTCGTTGGTCGAGCAGGAGTACCGGAAGAAGGTGCTGAGAGACCTCAACTCTTTGATTTCCGGGGCCGACAACACCGCCGAGGACGACGTCGTGGATCAGGAAGTCACTGATACGGAATGGTTCTTCCTCGTTTCCATGACCCAGAACTTCGTCAACGGCGTCGGGTTGCCGGGTCAGGCTTTTTTTCAGTCCAACCCGGTCTGGGTCGCCGGGCCGGACCGCCTCGCCGACTCGCCGTGCGAGCGGGCCAGACAAGGTCAGTTGTTCGGCCTACAGACTATGGTCTGCGTCCCGACGGCGAATGGGGTCGTCGAGTTGGGCTCGACGGAGCTTATATACCAGAGCGCGGATCTGATGAACAAGGTCCGAGTGTTGTTTGATTTCAATAACCTTGAAGTCGGTTCTTGGCCCATGGGTGGCGCCGCCGATCAGGGAGAGAACGACCCGTCGTCGCTGTGGATCAACGACAACCCGGCCAGCACAATTGAAGTTGTCAAGGACTCAGTGCACATGGGTCCGGCGACTTCAGGACCCAGTACTAGTAACCATCAAATCTCGAAGCCGATTCAGTTCGACAGCCACCCTAGTTCGAGTGGCTTATCCGAGAATCCGAGCGCCGTTCTCCAAGTACAATCTCAGAGCAATCACCACCACCAAGCCCAGCAGCAAGTACAGACGCAGAGCTTCTTCACCAGGGAGCTGAACTTCTCCGATTACAACGCCTACGACGGCAGCAGCGTCAAGAATTCGAATTCGAATTCTCATTCCTTGAAGCCGGAATCCGGCGAGATATTGAACTTCGGCGAGAGCAAGAGGACATCTTACAGTGCCAACAACGGGAAGTTGTTTTCGGCTCAATCCCAAATCGCCGCCGAAGACAACAACAAAAAGAAGAGATCGCCGCCGTCGAGGGGCAGCAACGACGAGGGGATCCTGTCGTTTAGTTCGGGAGTGATTCTACCGTCGAGCAGCGGCGTCGTGAAATCGAGCGCCGGCCCAGTAGATTCCGACCACTCCGACCTCGAAGCCTCCGTGGCTAAGGAGGCTGACAGTAGCAGAGTTGTGGACCCGGAAAAACGACCCCGGAAAAGAGGTCGTAAACCGGCGAACGGCAGAGAGGAGCCGCTGAACCACGTAGAGGCGGAGAGACAGAGAAGAGAGAAGCTCAACCAGAGATTCTATGCTCTCCGAGCTGTCGTCCCAAATGTTTCGAAAATGGACAAGGCATCTCTGCTTGGAGACGCCATCTCTTACATCACCGAGCTCAAGACGAAGCTGCAAACGACGGAGTCCGACAAGGAGGACCTCCACAAGCAAGTGGAGACGTTAAGTAAAGAGCTACAAGAGTCCCGAACGTCTTCGGGTTTGGACCAAGAGCTTAAAGGGTCTAATAAGTTGATCGATTTGGATATTGATGTGAAGATACTCGGATGGGACGCTAGGATTCAAATTCAATGTAGCAAGAAGAACCACCCTGCGGCGAGACTAATGGCGGCGCTGATGGAGCTGGACTTGGATGTACACCATGCCAGCGTCTCGGTAGTCAATGATTTGATGATCCAGCAAGCCACGGTGAGGATGGGCAGCCGGATTTACACGCAGGAGCAGCTCAGGTTAGCTCTATCAGCCAAAGTGGGGGATGCCAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009651 GO:0009718 GO:0009719 GO:0009725 GO:0009753 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042440 GO:0042538 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043425 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0046283 GO:0046872 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

693

Amino Acids

76.2

Weight (kDa)

5.45

Isoelectric Point (pI)

48.86

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	89 - 270	1.3e-54	bHLH-MYC and R2R3-MYB transcription factors N-terminal
HLH	PF00010	521 - 567	1e-11	Helix-loop-helix DNA-binding domain
bHLH-TF_ACT-like_plant	PF22754	615 - 685	4e-07	Plant bHLH transcription factor, ACT-like domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32640
fragaria_vesca	FvH4_1g13600 FvH4_1g13601 FvH4_4g17280 FvH4_5g22100 FvH4_6g24370 FvH4_6g25910
prunus_persica	Prupe.5G035400_v2.0.a1
pyrus_communis	pycom06g02850 pycom16g24430
rosa_chinensis	RchiOBHm_Chr7g0209751
rosa_laevigata	RLG00000003096 RLG00000008856 RLG00000036489 RLG00000036838
rosa_multiflora	Rmu_sc0000161.1_g000024 Rmu_sc0002616.1_g000020
rosa_roxburghii	Rroxscaffold_1G00006980
rosa_rugosa	Rorug05G0432900 Rorug07G0116000
rosa_samantha	Rh4DG124100 Rh5AG516700 Rh5AG518900 Rh5AG519400 Rh5BG540600 Rh5CG563400 Rh5DG551100 Rh5DG551400 Rh5DG551800 Rh7AG249600 Rh7BG243500 Rh7CG265600 Rh7DG255400
rosa_wichuraiana	Rw0G022750 Rw7G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	434, 522
AccB1I	GGYRCC	1 cut(s)	851
AccB7I	CCANNNNNTGG	1 cut(s)	327
AccBSI	CCGCTC	1 cut(s)	676
AccII	CGCG	3 cut(s)	53, 200, 779
AccIII	TCCGGA	1 cut(s)	350
AclWI	GGATC	6 cut(s)	534, 789, 899, 1357, 1370, 1984
AcoI	YGGCCR	3 cut(s)	195, 237, 906
AcsI	RAATTY	4 cut(s)	1177, 1183, 1189, 1881
AcuI	CTGAAG	2 cut(s)	263, 942
AcyI	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
AfaI	GTAC	6 cut(s)	341, 452, 970, 1062, 1104, 1953
AflIII	ACRYGT	1 cut(s)	51
AgsI	TTSAA	8 cut(s)	253, 817, 827, 920, 1204, 1228, 1880, 1886
AhdI	GACNNNNNGTC	2 cut(s)	52, 880
AhlI	ACTAGT	1 cut(s)	971
AjnI	CCWGG	3 cut(s)	255, 299, 1124
Alw21I	GWGCWC	3 cut(s)	366, 942, 1698
Alw26I	GTCTC	8 cut(s)	60, 254, 465, 1573, 1665, 1748, 1909, 1972
Alw44I	GTGCAC	1 cut(s)	938
AlwI	GGATC	6 cut(s)	534, 789, 899, 1357, 1370, 1984
AlwNI	CAGNNNCTG	1 cut(s)	286
Aor13HI	TCCGGA	1 cut(s)	350
ApaLI	GTGCAC	1 cut(s)	938
ApoI	RAATTY	4 cut(s)	1177, 1183, 1189, 1881
Asp700I	GAANNNNTTC	1 cut(s)	1789
AspLEI	GCGC	8 cut(s)	202, 247, 286, 779, 854, 1049, 1424, 1930
AsuC2I	CCSGG	7 cut(s)	493, 603, 629, 643, 905, 1502, 1516
AsuHPI	GGTGA	6 cut(s)	82, 418, 1070, 1114, 1681, 2017
AsuII	TTCGAA	3 cut(s)	1181, 1187, 1643
AvaII	GGWCC	8 cut(s)	312, 649, 796, 947, 962, 1498, 1735, 1801
BaeGI	GKGCMC	1 cut(s)	942
BamHI	GGATCC	1 cut(s)	1362
BanI	GGYRCC	1 cut(s)	851
BanII	GRGCYC	2 cut(s)	755, 1698
BbsI	GAAGAC	2 cut(s)	1314, 1782
Bbv12I	GWGCWC	3 cut(s)	366, 942, 1698
BccI	CCATC	7 cut(s)	329, 363, 987, 1685, 1857, 1927, 2005
BceAI	ACGGC	8 cut(s)	232, 604, 652, 744, 1034, 1177, 1321, 1558
BcgI	CGANNNNNNTGC	2 cut(s)	1390, 1424
BciT130I	CCWGG	3 cut(s)	257, 301, 1126
BciVI	GTATCC	1 cut(s)	9
BcnI	CCSGG	7 cut(s)	493, 603, 629, 643, 905, 1502, 1516
BcoDI	GTCTC	8 cut(s)	60, 254, 465, 1573, 1665, 1748, 1909, 1972
BcuI	ACTAGT	1 cut(s)	971
BfaI	CTAG	3 cut(s)	972, 1017, 1872
BfmI	CTRYAG	1 cut(s)	704
BfoI	RGCGCY	5 cut(s)	287, 855, 1050, 1425, 1931
BfuI	GTATCC	1 cut(s)	9
BglI	GCCNNNNNGGC	2 cut(s)	113, 1466
BmcAI	AGTACT	1 cut(s)	970
Bme18I	GGWCC	8 cut(s)	312, 649, 796, 947, 962, 1498, 1735, 1801
BmeRI	GACNNNNNGTC	2 cut(s)	52, 880
BmiI	GGNNCC	8 cut(s)	298, 496, 853, 948, 964, 1364, 1500, 1554
BmrI	ACTGGG	2 cut(s)	960, 1424
BmsI	GCATC	2 cut(s)	1667, 2062
BmuI	ACTGGG	2 cut(s)	960, 1424
BoxI	GACNNNNGTC	1 cut(s)	713
BpiI	GAAGAC	2 cut(s)	1314, 1782
BplI	GAGNNNNNCTC	4 cut(s)	737, 769, 1581, 1613
Bpu10I	CCTNAGC	2 cut(s)	1470, 2042
Bpu14I	TTCGAA	3 cut(s)	1181, 1187, 1643
BpuEI	CTTGAG	1 cut(s)	1682
BpuMI	CCSGG	7 cut(s)	493, 603, 629, 643, 905, 1502, 1516
Bsa29I	ATCGAT	1 cut(s)	1833
BsaAI	YACGTR	1 cut(s)	1567
BsaHI	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
BsaI	GGTCTC	1 cut(s)	465
BsaJI	CCNNGG	8 cut(s)	300, 492, 510, 843, 1125, 1464, 1514, 2001
BsaWI	WCCGGW	3 cut(s)	12, 350, 453
BsaXI	ACNNNNNCTCC	4 cut(s)	129, 159, 345, 375
Bse118I	RCCGGY	4 cut(s)	112, 235, 1424, 1534
Bse1I	ACTGG	2 cut(s)	966, 1430
BseAI	TCCGGA	1 cut(s)	350
BseBI	CCWGG	3 cut(s)	257, 301, 1126
BseCI	ATCGAT	1 cut(s)	1833
BseDI	CCNNGG	8 cut(s)	300, 492, 510, 843, 1125, 1464, 1514, 2001
BseGI	GGATG	6 cut(s)	139, 374, 1868, 1954, 2016, 2077
BseMII	CTCAG	5 cut(s)	170, 458, 948, 1082, 2056
BseNI	ACTGG	2 cut(s)	966, 1430
BseRI	GAGGAG	1 cut(s)	1565
BseSI	GKGCMC	1 cut(s)	942
BseX3I	CGGCCG	2 cut(s)	195, 237
BseYI	CCCAGC	4 cut(s)	108, 117, 129, 1092
Bsh1236I	CGCG	3 cut(s)	53, 200, 779
Bsh1285I	CGRYCG	2 cut(s)	198, 240
BshNI	GGYRCC	1 cut(s)	851
BshVI	ATCGAT	1 cut(s)	1833
BsiEI	CGRYCG	2 cut(s)	198, 240
BsiHKAI	GWGCWC	3 cut(s)	366, 942, 1698
BsiWI	CGTACG	1 cut(s)	339
BslFI	GGGAC	5 cut(s)	413, 707, 1616, 1765, 1880
BsmAI	GTCTC	8 cut(s)	60, 254, 465, 1573, 1665, 1748, 1909, 1972
BsmBI	CGTCTC	5 cut(s)	60, 254, 1665, 1748, 1972
BsmFI	GGGAC	5 cut(s)	413, 707, 1616, 1765, 1880
Bso31I	GGTCTC	1 cut(s)	465
Bsp119I	TTCGAA	3 cut(s)	1181, 1187, 1643
Bsp1286I	GDGCHC	4 cut(s)	366, 755, 942, 1698
Bsp13I	TCCGGA	1 cut(s)	350
Bsp1407I	TGTACA	1 cut(s)	1951
Bsp19I	CCATGG	1 cut(s)	843
BspCNI	CTCAG	5 cut(s)	169, 459, 947, 1081, 2055
BspDI	ATCGAT	1 cut(s)	1833
BspEI	TCCGGA	1 cut(s)	350
BspFNI	CGCG	3 cut(s)	53, 200, 779
BspHI	TCATGA	1 cut(s)	72
BspLI	GGNNCC	8 cut(s)	298, 496, 853, 948, 964, 1364, 1500, 1554
BspPI	GGATC	6 cut(s)	534, 789, 899, 1357, 1370, 1984
BspT104I	TTCGAA	3 cut(s)	1181, 1187, 1643
BspT107I	GGYRCC	1 cut(s)	851
BspTNI	GGTCTC	1 cut(s)	465
BsrBI	CCGCTC	1 cut(s)	676
BsrFI	RCCGGY	4 cut(s)	112, 235, 1424, 1534
BsrGI	TGTACA	1 cut(s)	1951
BsrI	ACTGG	2 cut(s)	966, 1430
BssAI	RCCGGY	4 cut(s)	112, 235, 1424, 1534
BssECI	CCNNGG	8 cut(s)	300, 492, 510, 843, 1125, 1464, 1514, 2001
BssNI	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
BssT1I	CCWWGG	1 cut(s)	843
Bst2UI	CCWGG	3 cut(s)	257, 301, 1126
Bst4CI	ACNGT	4 cut(s)	1259, 1395, 1484, 2005
Bst6I	CTCTTC	2 cut(s)	1319, 1582
BstACI	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
BstAUI	TGTACA	1 cut(s)	1951
BstBAI	YACGTR	1 cut(s)	1567
BstBI	TTCGAA	3 cut(s)	1181, 1187, 1643
BstDEI	CTNAG	6 cut(s)	156, 467, 934, 1068, 1470, 2042
BstDSI	CCRYGG	3 cut(s)	843, 1464, 2001
BstF5I	GGATG	6 cut(s)	139, 374, 1868, 1954, 2016, 2077
BstFNI	CGCG	3 cut(s)	53, 200, 779
BstH2I	RGCGCY	5 cut(s)	287, 855, 1050, 1425, 1931
BstHHI	GCGC	8 cut(s)	202, 247, 286, 779, 854, 1049, 1424, 1930
BstMAI	GTCTC	8 cut(s)	60, 254, 465, 1573, 1665, 1748, 1909, 1972
BstMCI	CGRYCG	2 cut(s)	198, 240
BstNI	CCWGG	3 cut(s)	257, 301, 1126
BstPAI	GACNNNNGTC	1 cut(s)	713
BstSFI	CTRYAG	1 cut(s)	704
BstSLI	GKGCMC	1 cut(s)	942
BstUI	CGCG	3 cut(s)	53, 200, 779
BstV2I	GAAGAC	2 cut(s)	1314, 1782
BstX2I	RGATCY	2 cut(s)	781, 1362
BstYI	RGATCY	2 cut(s)	781, 1362
BstZI	CGGCCG	2 cut(s)	195, 237
Bsu15I	ATCGAT	1 cut(s)	1833
BsuI	GTATCC	1 cut(s)	9
BsuTUI	ATCGAT	1 cut(s)	1833
BtgI	CCRYGG	3 cut(s)	843, 1464, 2001
BtsCI	GGATG	6 cut(s)	139, 374, 1868, 1954, 2016, 2077
BtsIMutI	CAGTG	3 cut(s)	537, 942, 1264
CaiI	CAGNNNCTG	1 cut(s)	286
CciI	TCATGA	1 cut(s)	72
CfoI	GCGC	8 cut(s)	202, 247, 286, 779, 854, 1049, 1424, 1930
Cfr10I	RCCGGY	4 cut(s)	112, 235, 1424, 1534
ClaI	ATCGAT	1 cut(s)	1833
CpoI	CGGWCCG	1 cut(s)	649
Csp6I	GTAC	6 cut(s)	340, 451, 969, 1061, 1103, 1952
CspI	CGGWCCG	1 cut(s)	649
CviAII	CATG	7 cut(s)	28, 61, 73, 568, 844, 943, 1958
CviQI	GTAC	6 cut(s)	340, 451, 969, 1061, 1103, 1952
DdeI	CTNAG	6 cut(s)	156, 467, 934, 1068, 1470, 2042
DinI	GGCGCC	1 cut(s)	853
DriI	GACNNNNNGTC	2 cut(s)	52, 880
EaeI	YGGCCR	3 cut(s)	195, 237, 906
EagI	CGGCCG	2 cut(s)	195, 237
Eam1104I	CTCTTC	2 cut(s)	1319, 1582
Eam1105I	GACNNNNNGTC	2 cut(s)	52, 880
EarI	CTCTTC	2 cut(s)	1319, 1582
EciI	GGCGGA	2 cut(s)	216, 1589
Ecl136II	GAGCTC	1 cut(s)	1696
EclXI	CGGCCG	2 cut(s)	195, 237
Eco130I	CCWWGG	1 cut(s)	843
Eco24I	GRGCYC	2 cut(s)	755, 1698
Eco31I	GGTCTC	1 cut(s)	465
Eco47I	GGWCC	8 cut(s)	312, 649, 796, 947, 962, 1498, 1735, 1801
Eco52I	CGGCCG	2 cut(s)	195, 237
Eco53kI	GAGCTC	1 cut(s)	1696
Eco57I	CTGAAG	2 cut(s)	263, 942
EcoICRI	GAGCTC	1 cut(s)	1696
EcoO109I	RGGNCCY	2 cut(s)	962, 1735
EcoRI	GAATTC	3 cut(s)	1177, 1183, 1189
EcoRII	CCWGG	3 cut(s)	255, 299, 1124
EcoT14I	CCWWGG	1 cut(s)	843
EcoT38I	GRGCYC	2 cut(s)	755, 1698
EgeI	GGCGCC	1 cut(s)	853
EheI	GGCGCC	1 cut(s)	853
ErhI	CCWWGG	1 cut(s)	843
Esp3I	CGTCTC	5 cut(s)	60, 254, 1665, 1748, 1972
FaeI	CATG	7 cut(s)	31, 64, 76, 571, 847, 946, 1961
FaqI	GGGAC	5 cut(s)	413, 707, 1616, 1765, 1880
FatI	CATG	7 cut(s)	27, 60, 72, 567, 843, 942, 1957
FauI	CCCGC	4 cut(s)	130, 142, 194, 669
FokI	GGATG	5 cut(s)	126, 381, 1875, 1961, 2023
FriOI	GRGCYC	2 cut(s)	755, 1698
FspBI	CTAG	3 cut(s)	972, 1017, 1872
GlaI	GCGC	8 cut(s)	201, 246, 285, 778, 853, 1048, 1423, 1929
GsaI	CCCAGC	4 cut(s)	112, 121, 133, 1096
HaeII	RGCGCY	5 cut(s)	287, 855, 1050, 1425, 1931
HhaI	GCGC	8 cut(s)	202, 247, 286, 779, 854, 1049, 1424, 1930
Hin1I	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
Hin1II	CATG	7 cut(s)	31, 64, 76, 571, 847, 946, 1961
Hin6I	GCGC	8 cut(s)	200, 245, 284, 777, 852, 1047, 1422, 1928
HinP1I	GCGC	8 cut(s)	200, 245, 284, 777, 852, 1047, 1422, 1928
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HphI	GGTGA	6 cut(s)	82, 418, 1070, 1114, 1681, 2017
Hpy166II	GTNNAC	5 cut(s)	586, 940, 1498, 1532, 1954
Hpy8I	GTNNAC	5 cut(s)	586, 940, 1498, 1532, 1954
HpyAV	CCTTC	3 cut(s)	79, 106, 454
HpyCH4III	ACNGT	4 cut(s)	1259, 1395, 1484, 2005
HpyCH4IV	ACGT	5 cut(s)	431, 519, 1566, 1757, 1787
HpyCH4V	TGCA	3 cut(s)	271, 940, 1711
HpyF3I	CTNAG	6 cut(s)	156, 467, 934, 1068, 1470, 2042
HpySE526I	ACGT	5 cut(s)	431, 519, 1566, 1757, 1787
Hsp92I	GRCGYC	6 cut(s)	431, 519, 591, 852, 1407, 1674
Hsp92II	CATG	7 cut(s)	31, 64, 76, 571, 847, 946, 1961
HspAI	GCGC	8 cut(s)	200, 245, 284, 777, 852, 1047, 1422, 1928
KasI	GGCGCC	1 cut(s)	851
Kpn2I	TCCGGA	1 cut(s)	350
KroI	GCCGGC	3 cut(s)	112, 235, 1424
KroNI	GCCGGC	3 cut(s)	114, 237, 1426
LmnI	GCTCC	7 cut(s)	296, 353, 760, 1129, 1552, 1936, 2035
LweI	GCATC	2 cut(s)	1667, 2062
MaeI	CTAG	3 cut(s)	972, 1017, 1872
MaeII	ACGT	5 cut(s)	431, 519, 1566, 1757, 1787
MaeIII	GTNAC	2 cut(s)	535, 974
MbiI	CCGCTC	1 cut(s)	676
MfeI	CAATTG	1 cut(s)	915
MflI	RGATCY	2 cut(s)	781, 1362
MhlI	GDGCHC	4 cut(s)	366, 755, 942, 1698
MluCI	AATT	5 cut(s)	915, 1177, 1183, 1189, 1881
MluI	ACGCGT	1 cut(s)	51
Mly113I	GGCGCC	1 cut(s)	852
MlyI	GAGTC	4 cut(s)	656, 926, 1730, 1787
MmeI	TCCRAC	5 cut(s)	201, 648, 1464, 1473, 1749
MroI	TCCGGA	1 cut(s)	350
MroNI	GCCGGC	3 cut(s)	112, 235, 1424
MroXI	GAANNNNTTC	1 cut(s)	1789
MseI	TTAA	2 cut(s)	1760, 1812
MspA1I	CMGCKG	4 cut(s)	242, 274, 1404, 1558
MunI	CAATTG	1 cut(s)	915
MvaI	CCWGG	3 cut(s)	257, 301, 1126
MvnI	CGCG	3 cut(s)	53, 200, 779
NaeI	GCCGGC	3 cut(s)	114, 237, 1426
NarI	GGCGCC	1 cut(s)	852
NciI	CCSGG	7 cut(s)	493, 603, 629, 643, 905, 1502, 1516
NcoI	CCATGG	1 cut(s)	843
NgoMIV	GCCGGC	3 cut(s)	112, 235, 1424
NlaIII	CATG	7 cut(s)	31, 64, 76, 571, 847, 946, 1961
NlaIV	GGNNCC	8 cut(s)	298, 496, 853, 948, 964, 1364, 1500, 1554
NmeAIII	GCCGAG	1 cut(s)	535
NmuCI	GTSAC	1 cut(s)	535
NspV	TTCGAA	3 cut(s)	1181, 1187, 1643
PagI	TCATGA	1 cut(s)	72
PcsI	WCGNNNNNNNCGW	6 cut(s)	372, 431, 588, 1167, 1337, 1461
PdiI	GCCGGC	3 cut(s)	114, 237, 1426
PdmI	GAANNNNTTC	1 cut(s)	1789
PfeI	GAWTC	8 cut(s)	31, 997, 1039, 1211, 1387, 1436, 1608, 1876
Pfl23II	CGTACG	1 cut(s)	339
PflFI	GACNNNGTC	4 cut(s)	430, 518, 687, 1720
PflMI	CCANNNNNTGG	1 cut(s)	327
PleI	GAGTC	4 cut(s)	656, 926, 1729, 1786
PluTI	GGCGCC	1 cut(s)	855
PpsI	GAGTC	4 cut(s)	656, 926, 1729, 1786
Ppu21I	YACGTR	1 cut(s)	1567
PpuMI	RGGWCCY	2 cut(s)	962, 1735
PshAI	GACNNNNGTC	1 cut(s)	713
Psp124BI	GAGCTC	1 cut(s)	1698
Psp5II	RGGWCCY	2 cut(s)	962, 1735
Psp6I	CCWGG	3 cut(s)	255, 299, 1124
PspFI	CCCAGC	4 cut(s)	108, 117, 129, 1092
PspGI	CCWGG	3 cut(s)	255, 299, 1124
PspLI	CGTACG	1 cut(s)	339
PspN4I	GGNNCC	8 cut(s)	298, 496, 853, 948, 964, 1364, 1500, 1554
PspPPI	RGGWCCY	2 cut(s)	962, 1735
PstNI	CAGNNNCTG	1 cut(s)	286
PsuI	RGATCY	2 cut(s)	781, 1362
PsyI	GACNNNGTC	4 cut(s)	430, 518, 687, 1720
RsaI	GTAC	6 cut(s)	341, 452, 970, 1062, 1104, 1953
RsaNI	GTAC	6 cut(s)	340, 451, 969, 1061, 1103, 1952
Rsr2I	CGGWCCG	1 cut(s)	649
RsrII	CGGWCCG	1 cut(s)	649
SacI	GAGCTC	1 cut(s)	1698
SaqAI	TTAA	2 cut(s)	1760, 1812
ScaI	AGTACT	1 cut(s)	970
SchI	GAGTC	4 cut(s)	656, 926, 1730, 1787
SduI	GDGCHC	4 cut(s)	366, 755, 942, 1698
SfaNI	GCATC	2 cut(s)	1667, 2062
SfcI	CTRYAG	1 cut(s)	704
SfoI	GGCGCC	1 cut(s)	853
SfuI	TTCGAA	3 cut(s)	1181, 1187, 1643
SinI	GGWCC	8 cut(s)	312, 649, 796, 947, 962, 1498, 1735, 1801
SmlI	CTYRAG	1 cut(s)	1697
SmoI	CTYRAG	1 cut(s)	1697
SpeI	ACTAGT	1 cut(s)	971
Sse9I	AATT	5 cut(s)	915, 1177, 1183, 1189, 1881
SspDI	GGCGCC	1 cut(s)	851
SspMI	CTAG	3 cut(s)	972, 1017, 1872
SstI	GAGCTC	1 cut(s)	1698
StyI	CCWWGG	1 cut(s)	843
TaaI	ACNGT	4 cut(s)	1259, 1395, 1484, 2005
TaiI	ACGT	5 cut(s)	434, 522, 1569, 1760, 1790
TasI	AATT	5 cut(s)	915, 1177, 1183, 1189, 1881
TatI	WGTACW	4 cut(s)	968, 1060, 1102, 1951
TfiI	GAWTC	8 cut(s)	31, 997, 1039, 1211, 1387, 1436, 1608, 1876
Tru1I	TTAA	2 cut(s)	1760, 1812
Tru9I	TTAA	2 cut(s)	1760, 1812
TscAI	CASTG	3 cut(s)	544, 942, 1264
TseFI	GTSAC	1 cut(s)	535
Tsp45I	GTSAC	1 cut(s)	535
TspDTI	ATGAA	3 cut(s)	44, 61, 803
TspGWI	ACGGA	7 cut(s)	20, 56, 349, 560, 773, 1453, 1733
TspRI	CASTG	3 cut(s)	544, 942, 1264
Tth111I	GACNNNGTC	4 cut(s)	430, 518, 687, 1720
Van91I	CCANNNNNTGG	1 cut(s)	327
VneI	GTGCAC	1 cut(s)	938
VpaK11BI	GGWCC	8 cut(s)	312, 649, 796, 947, 962, 1498, 1735, 1801
XapI	RAATTY	4 cut(s)	1177, 1183, 1189, 1881
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2008
XmnI	GAANNNNTTC	1 cut(s)	1789
XspI	CTAG	3 cut(s)	972, 1017, 1872
ZraI	GACGTC	2 cut(s)	432, 520
ZrmI	AGTACT	1 cut(s)	970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.