Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002616.1

Orthogroup ID

OG0003580

Physical Location & Seq

Genomic Coordinates Reverse (-)

65596 .. 68247

Gene Structure 2652 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002616.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

atgaatctctggacggacgacaacgcgtctctcatggaagccttcatgagcaactccgatctcacctccttctgggccgcccagccggcccagcccgcaacccaacccgcacatcccctccaccagcctcagtcctccgcttccacctccgactatccccgccctccggccgcgcagtcgcagtcgcagtcacagcctcctccgccgccgccggccgcggcgccgttcaaccaggagacgcttatgcagcggcttcaggcgctgatcgacggagccagggagagctggacctacgccatcttctggcagtcgtcgtacgagatgtccggagcttccgtgctcggatggggcgaggggttctacaaggacgagagggacaaggtgaaagcgaagcccaaaacgacggcgtcgttggtcgagcaggagtaccggaagaaagtgctgagagacctcaactctttgatttccggggccgacaacaccgccgaggacgacgtcgtggatcaggaagtcactgatacggaatggttcttcctcgtttccatgacccagaacttcgtcaacggcgtcgggttgccgggtcaggctttttttcagtccaacccggtctgggtcgccgggccggaccgcctcgccgactcggcgtgcgagcgggccagacaaggtcagatgttcggcctacagactatggtctgcgtcccgacggcgaatggggtcgtcgagttgggctcgacggagcttatataccagagcgcggatctgatgaacaaggtccgagtgttgtttgatttcaataaccttgaagtcggttcttggcccatgggtggcgccgccgatcagggagagaacgacccgtcgtcgctgtggatcaacgacaacccggccagcacaattgaagttgtcaaggactcagtgcacatgggtccggcgacttcaggacccagtactagtaaccatcaaatctccaagccgattcagttcgacagccacccaagttcgagtggcttatcggagaatccgagcgccgttctccaagtacaatctcagagcaatcaccaccccggggccgacaacaccgccgaggacgacgtcgtggatcaggaagtcactgatacggaatggttcttcctcgtttccatgacccagaacttcgtcaacggcgtcgggttgccgggtcaggctttttttcagtccaacccggtctgggtcgccgggccggaccgcctcgccgactcggcgtgcgagcgggccagacaaggtcagatgttcggcctacagactatggtctgcgtcccgacggcgaatggggtcgtcgagttgggctcgacggagcttatataccagagcgcggatctgatgaacaaggtccgagtgttgtttgatttcaataaccttgaagtcggttcttggcccatgggtggcgccgccgatcagggagagaacgacccgtcgtcgctgtggatcaacgacaacccggccagcacaattgaagttgtcaaggactcagtgcacatgggtccggcgacttcaggacccagtactagtaaccatcaaatctccaagccgattcagttcgacagccaccctagttcgagtggcttatcggagaatccgagcgccgttctccaagtacaatctcagagcaatcaccacaaccaagcccagcagcaagtacagactcagagcttcttcaccagggagctgaacttctccgattacaacggctacgacggcagcagcgtcaagaattcgaattcgaattctcattccttgaagccggaatccggcgagatattgaacttcggcgagagcaagaggacatcttacagtgccaacaacggcaagttgttttcggctcaatcccaaatcgccgccgaagacaacaacaaaaagaagagatcgccgccgtcgaggggcagcaacgacgaggggatcctgtcgtttagttcgggagtgattctaccgtcgagcagcggcgtcgtgaaatcgagcgccggcccagtagattccgaccactccgacctcgaagcctccgtggctagggaggccgacagtagcagagttgtggacccggaaaaacgaccccggaagagaggtcgtaaaccggcgaacggcagagaggagccgctgaaccacgtggaggcggagagacagagaagagagaagctcaaccagagattctatgctctccgagctgttgtcccaaatgtttcgaaaatggacaaggcatctctgcttggagacgccatctcttacatcaccgagctcaagacgaagctgcaaacgacggagtccgacaaggaggacctccacaagcaagtggagacgttaagtaaagagctacaagagtcccgaacgtcgtcgggtttggaccaagagcttaaagggtctaataagttgatcgatttggatattgatgtcaagatactcggatgggacgctaggattcaaattcaatgtagcaagaagaaccaccctgcggcgagactaatggcggcgctgatggagctggacttggatgtacaccatgccagcgtctcggtagtcaatgatttgatgatccagcaagccaccgtgaggatgggcagccgggtttacacgcaggagcagctcaggttagctctatcagccaaagtgggggatgccagataa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005509 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0006970 GO:0006972 GO:0008134 GO:0008150 GO:0008152 GO:0009058 GO:0009628 GO:0009651 GO:0009718 GO:0009719 GO:0009725 GO:0009753 GO:0009812 GO:0009813 GO:0009889 GO:0009891 GO:0009893 GO:0010033 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042221 GO:0042440 GO:0042538 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043425 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0046148 GO:0046283 GO:0046872 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901576 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

HLH bHLH-MYC_N

Protein Analysis

883

Amino Acids

96.36

Weight (kDa)

5.01

Isoelectric Point (pI)

46.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003580)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32640
fragaria_vesca	FvH4_1g13600 FvH4_1g13601 FvH4_4g17280 FvH4_5g22100 FvH4_6g24370 FvH4_6g25910
prunus_persica	Prupe.5G035400_v2.0.a1
pyrus_communis	pycom06g02850 pycom16g24430
rosa_chinensis	RchiOBHm_Chr7g0209751
rosa_laevigata	RLG00000003096 RLG00000008856 RLG00000036489 RLG00000036838
rosa_multiflora	Rmu_sc0000161.1_g000024 Rmu_sc0002616.1_g000020
rosa_roxburghii	Rroxscaffold_1G00006980
rosa_rugosa	Rorug05G0432900 Rorug07G0116000
rosa_samantha	Rh4DG124100 Rh5AG516700 Rh5AG518900 Rh5AG519400 Rh5BG540600 Rh5CG563400 Rh5DG551100 Rh5DG551400 Rh5DG551800 Rh7AG249600 Rh7BG243500 Rh7CG265600 Rh7DG255400
rosa_wichuraiana	Rw0G022750 Rw7G021160

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	498, 1092
AccB1I	GGYRCC	3 cut(s)	220, 827, 1421
AccB7I	CCANNNNNTGG	1 cut(s)	303
AccBSI	CCGCTC	2 cut(s)	652, 1246
AccII	CGCG	5 cut(s)	26, 173, 218, 755, 1349
AccIII	TCCGGA	1 cut(s)	326
AclWI	GGATC	9 cut(s)	510, 765, 875, 1104, 1359, 1469, 1927, 1940, 2554
AcoI	YGGCCR	4 cut(s)	168, 213, 882, 1476
AcsI	RAATTY	4 cut(s)	1747, 1753, 1759, 2451
AcuI	CTGAAG	3 cut(s)	239, 918, 1512
AcvI	CACGTG	1 cut(s)	2137
AfaI	GTAC	8 cut(s)	317, 428, 946, 1038, 1540, 1632, 1674, 2523
AflIII	ACRYGT	1 cut(s)	24
AhdI	GACNNNNNGTC	3 cut(s)	25, 856, 1450
AhlI	ACTAGT	2 cut(s)	947, 1541
AjnI	CCWGG	3 cut(s)	231, 275, 1694
Alw21I	GWGCWC	4 cut(s)	342, 918, 1512, 2268
Alw26I	GTCTC	8 cut(s)	33, 230, 441, 2143, 2235, 2318, 2479, 2542
Alw44I	GTGCAC	2 cut(s)	914, 1508
AlwI	GGATC	9 cut(s)	510, 765, 875, 1104, 1359, 1469, 1927, 1940, 2554
AlwNI	CAGNNNCTG	1 cut(s)	262
Ama87I	CYCGRG	1 cut(s)	1061
Aor13HI	TCCGGA	1 cut(s)	326
ApaLI	GTGCAC	2 cut(s)	914, 1508
ApeKI	GCWGC	9 cut(s)	247, 1666, 1734, 1737, 1917, 1971, 2278, 2586, 2608
ApoI	RAATTY	4 cut(s)	1747, 1753, 1759, 2451
AsuHPI	GGTGA	6 cut(s)	55, 394, 1046, 1640, 1684, 2251
AsuII	TTCGAA	3 cut(s)	1751, 1757, 2213
AvaI	CYCGRG	1 cut(s)	1061
BaeGI	GKGCMC	2 cut(s)	918, 1512
BamHI	GGATCC	1 cut(s)	1932
BanI	GGYRCC	3 cut(s)	220, 827, 1421
BanII	GRGCYC	3 cut(s)	731, 1325, 2268
BbrPI	CACGTG	1 cut(s)	2137
BbsI	GAAGAC	1 cut(s)	1884
Bbv12I	GWGCWC	4 cut(s)	342, 918, 1512, 2268
BbvI	GCAGC	9 cut(s)	259, 1678, 1746, 1749, 1929, 1983, 2265, 2598, 2620
BccI	CCATC	8 cut(s)	305, 339, 963, 1557, 2255, 2427, 2497, 2575
BcgI	CGANNNNNNTGC	2 cut(s)	1960, 1994
BciT130I	CCWGG	3 cut(s)	233, 277, 1696
BcoDI	GTCTC	8 cut(s)	33, 230, 441, 2143, 2235, 2318, 2479, 2542
BcuI	ACTAGT	2 cut(s)	947, 1541
BfaI	CTAG	5 cut(s)	948, 1542, 1587, 2040, 2442
BfmI	CTRYAG	2 cut(s)	680, 1274
BfoI	RGCGCY	8 cut(s)	224, 263, 831, 1026, 1425, 1620, 1995, 2501
BglI	GCCNNNNNGGC	4 cut(s)	86, 641, 1235, 2036
BmcAI	AGTACT	2 cut(s)	946, 1540
BmeRI	GACNNNNNGTC	3 cut(s)	25, 856, 1450
BmeT110I	CYCGRG	1 cut(s)	1061
BmrI	ACTGGG	3 cut(s)	936, 1530, 1994
BmsI	GCATC	2 cut(s)	2237, 2632
BmuI	ACTGGG	3 cut(s)	936, 1530, 1994
BoxI	GACNNNNGTC	2 cut(s)	689, 1283
BpiI	GAAGAC	1 cut(s)	1884
BplI	GAGNNNNNCTC	6 cut(s)	713, 745, 1307, 1339, 2151, 2183
Bpu10I	CCTNAGC	1 cut(s)	2612
Bpu14I	TTCGAA	3 cut(s)	1751, 1757, 2213
BpuEI	CTTGAG	1 cut(s)	2252
Bsa29I	ATCGAT	1 cut(s)	2403
BsaAI	YACGTR	1 cut(s)	2137
BsaI	GGTCTC	1 cut(s)	441
BsaWI	WCCGGW	2 cut(s)	326, 429
BsaXI	ACNNNNNCTCC	4 cut(s)	102, 132, 321, 351
Bse118I	RCCGGY	4 cut(s)	85, 211, 1994, 2104
Bse1I	ACTGG	3 cut(s)	942, 1536, 2000
BseAI	TCCGGA	1 cut(s)	326
BseBI	CCWGG	3 cut(s)	233, 277, 1696
BseCI	ATCGAT	1 cut(s)	2403
BseGI	GGATG	6 cut(s)	112, 350, 2438, 2524, 2586, 2647
BseMII	CTCAG	8 cut(s)	143, 434, 924, 1058, 1518, 1652, 1694, 2626
BseNI	ACTGG	3 cut(s)	942, 1536, 2000
BseRI	GAGGAG	2 cut(s)	189, 2135
BseSI	GKGCMC	2 cut(s)	918, 1512
BseX3I	CGGCCG	2 cut(s)	168, 213
BseXI	GCAGC	9 cut(s)	259, 1678, 1746, 1749, 1929, 1983, 2265, 2598, 2620
BseYI	CCCAGC	3 cut(s)	81, 90, 1662
Bsh1236I	CGCG	5 cut(s)	26, 173, 218, 755, 1349
Bsh1285I	CGRYCG	2 cut(s)	171, 216
BshNI	GGYRCC	3 cut(s)	220, 827, 1421
BshVI	ATCGAT	1 cut(s)	2403
BsiEI	CGRYCG	2 cut(s)	171, 216
BsiHKAI	GWGCWC	4 cut(s)	342, 918, 1512, 2268
BsiHKCI	CYCGRG	1 cut(s)	1061
BsiWI	CGTACG	1 cut(s)	315
BslFI	GGGAC	6 cut(s)	389, 683, 1277, 2186, 2335, 2450
BsmAI	GTCTC	8 cut(s)	33, 230, 441, 2143, 2235, 2318, 2479, 2542
BsmBI	CGTCTC	5 cut(s)	33, 230, 2235, 2318, 2542
BsmFI	GGGAC	6 cut(s)	389, 683, 1277, 2186, 2335, 2450
Bso31I	GGTCTC	1 cut(s)	441
BsoBI	CYCGRG	1 cut(s)	1061
Bsp119I	TTCGAA	3 cut(s)	1751, 1757, 2213
Bsp1286I	GDGCHC	6 cut(s)	342, 731, 918, 1325, 1512, 2268
Bsp13I	TCCGGA	1 cut(s)	326
Bsp1407I	TGTACA	1 cut(s)	2521
Bsp19I	CCATGG	2 cut(s)	819, 1413
BspCNI	CTCAG	8 cut(s)	142, 435, 923, 1057, 1517, 1651, 1693, 2625
BspDI	ATCGAT	1 cut(s)	2403
BspEI	TCCGGA	1 cut(s)	326
BspFNI	CGCG	5 cut(s)	26, 173, 218, 755, 1349
BspHI	TCATGA	1 cut(s)	45
BspPI	GGATC	9 cut(s)	510, 765, 875, 1104, 1359, 1469, 1927, 1940, 2554
BspT104I	TTCGAA	3 cut(s)	1751, 1757, 2213
BspT107I	GGYRCC	3 cut(s)	220, 827, 1421
BspTNI	GGTCTC	1 cut(s)	441
BsrBI	CCGCTC	2 cut(s)	652, 1246
BsrFI	RCCGGY	4 cut(s)	85, 211, 1994, 2104
BsrGI	TGTACA	1 cut(s)	2521
BsrI	ACTGG	3 cut(s)	942, 1536, 2000
BssAI	RCCGGY	4 cut(s)	85, 211, 1994, 2104
BssT1I	CCWWGG	2 cut(s)	819, 1413
Bst2UI	CCWGG	3 cut(s)	233, 277, 1696
Bst4CI	ACNGT	4 cut(s)	1829, 1965, 2054, 2575
Bst6I	CTCTTC	3 cut(s)	1889, 2084, 2152
BstAUI	TGTACA	1 cut(s)	2521
BstBAI	YACGTR	1 cut(s)	2137
BstBI	TTCGAA	3 cut(s)	1751, 1757, 2213
BstDEI	CTNAG	8 cut(s)	129, 443, 910, 1044, 1504, 1638, 1680, 2612
BstDSI	CCRYGG	4 cut(s)	216, 819, 1413, 2034
BstF5I	GGATG	6 cut(s)	112, 350, 2438, 2524, 2586, 2647
BstFNI	CGCG	5 cut(s)	26, 173, 218, 755, 1349
BstH2I	RGCGCY	8 cut(s)	224, 263, 831, 1026, 1425, 1620, 1995, 2501
BstMAI	GTCTC	8 cut(s)	33, 230, 441, 2143, 2235, 2318, 2479, 2542
BstMCI	CGRYCG	2 cut(s)	171, 216
BstNI	CCWGG	3 cut(s)	233, 277, 1696
BstPAI	GACNNNNGTC	2 cut(s)	689, 1283
BstSFI	CTRYAG	2 cut(s)	680, 1274
BstSLI	GKGCMC	2 cut(s)	918, 1512
BstUI	CGCG	5 cut(s)	26, 173, 218, 755, 1349
BstV1I	GCAGC	9 cut(s)	259, 1678, 1746, 1749, 1929, 1983, 2265, 2598, 2620
BstV2I	GAAGAC	1 cut(s)	1884
BstX2I	RGATCY	3 cut(s)	757, 1351, 1932
BstYI	RGATCY	3 cut(s)	757, 1351, 1932
BstZI	CGGCCG	2 cut(s)	168, 213
Bsu15I	ATCGAT	1 cut(s)	2403
BsuTUI	ATCGAT	1 cut(s)	2403
BtgI	CCRYGG	4 cut(s)	216, 819, 1413, 2034
BtsCI	GGATG	6 cut(s)	112, 350, 2438, 2524, 2586, 2647
BtsIMutI	CAGTG	5 cut(s)	513, 918, 1107, 1512, 1834
CaiI	CAGNNNCTG	1 cut(s)	262
CciI	TCATGA	1 cut(s)	45
Cfr10I	RCCGGY	4 cut(s)	85, 211, 1994, 2104
Cfr42I	CCGCGG	1 cut(s)	219
Cfr9I	CCCGGG	1 cut(s)	1061
ClaI	ATCGAT	1 cut(s)	2403
CpoI	CGGWCCG	2 cut(s)	625, 1219
Csp6I	GTAC	8 cut(s)	316, 427, 945, 1037, 1539, 1631, 1673, 2522
CspI	CGGWCCG	2 cut(s)	625, 1219
CviAII	CATG	9 cut(s)	34, 46, 544, 820, 919, 1138, 1414, 1513, 2528
CviQI	GTAC	8 cut(s)	316, 427, 945, 1037, 1539, 1631, 1673, 2522
DdeI	CTNAG	8 cut(s)	129, 443, 910, 1044, 1504, 1638, 1680, 2612
DinI	GGCGCC	3 cut(s)	222, 829, 1423
DriI	GACNNNNNGTC	3 cut(s)	25, 856, 1450
EaeI	YGGCCR	4 cut(s)	168, 213, 882, 1476
EagI	CGGCCG	2 cut(s)	168, 213
Eam1104I	CTCTTC	3 cut(s)	1889, 2084, 2152
Eam1105I	GACNNNNNGTC	3 cut(s)	25, 856, 1450
EarI	CTCTTC	3 cut(s)	1889, 2084, 2152
EciI	GGCGGA	2 cut(s)	192, 2159
Ecl136II	GAGCTC	1 cut(s)	2266
EclXI	CGGCCG	2 cut(s)	168, 213
Eco130I	CCWWGG	2 cut(s)	819, 1413
Eco24I	GRGCYC	3 cut(s)	731, 1325, 2268
Eco31I	GGTCTC	1 cut(s)	441
Eco52I	CGGCCG	2 cut(s)	168, 213
Eco53kI	GAGCTC	1 cut(s)	2266
Eco57I	CTGAAG	3 cut(s)	239, 918, 1512
Eco72I	CACGTG	1 cut(s)	2137
Eco88I	CYCGRG	1 cut(s)	1061
EcoICRI	GAGCTC	1 cut(s)	2266
EcoO109I	RGGNCCY	3 cut(s)	938, 1532, 2305
EcoRI	GAATTC	3 cut(s)	1747, 1753, 1759
EcoRII	CCWGG	3 cut(s)	231, 275, 1694
EcoT14I	CCWWGG	2 cut(s)	819, 1413
EcoT38I	GRGCYC	3 cut(s)	731, 1325, 2268
EgeI	GGCGCC	3 cut(s)	222, 829, 1423
EheI	GGCGCC	3 cut(s)	222, 829, 1423
ErhI	CCWWGG	2 cut(s)	819, 1413
Esp3I	CGTCTC	5 cut(s)	33, 230, 2235, 2318, 2542
FaeI	CATG	9 cut(s)	37, 49, 547, 823, 922, 1141, 1417, 1516, 2531
FaqI	GGGAC	6 cut(s)	389, 683, 1277, 2186, 2335, 2450
FatI	CATG	9 cut(s)	33, 45, 543, 819, 918, 1137, 1413, 1512, 2527
FauI	CCCGC	5 cut(s)	103, 115, 167, 645, 1239
FokI	GGATG	5 cut(s)	99, 357, 2445, 2531, 2593
FriOI	GRGCYC	3 cut(s)	731, 1325, 2268
FspBI	CTAG	5 cut(s)	948, 1542, 1587, 2040, 2442
GsaI	CCCAGC	3 cut(s)	85, 94, 1666
HaeII	RGCGCY	8 cut(s)	224, 263, 831, 1026, 1425, 1620, 1995, 2501
Hin1II	CATG	9 cut(s)	37, 49, 547, 823, 922, 1141, 1417, 1516, 2531
HincII	GTYRAC	2 cut(s)	562, 1156
HindII	GTYRAC	2 cut(s)	562, 1156
HphI	GGTGA	6 cut(s)	55, 394, 1046, 1640, 1684, 2251
Hpy166II	GTNNAC	8 cut(s)	562, 916, 1156, 1510, 2068, 2102, 2524, 2596
Hpy8I	GTNNAC	8 cut(s)	562, 916, 1156, 1510, 2068, 2102, 2524, 2596
HpyAV	CCTTC	2 cut(s)	52, 79
HpyCH4III	ACNGT	4 cut(s)	1829, 1965, 2054, 2575
HpyCH4IV	ACGT	5 cut(s)	495, 1089, 2136, 2327, 2357
HpyCH4V	TGCA	4 cut(s)	247, 916, 1510, 2281
HpyF3I	CTNAG	8 cut(s)	129, 443, 910, 1044, 1504, 1638, 1680, 2612
HpySE526I	ACGT	5 cut(s)	495, 1089, 2136, 2327, 2357
Hsp92II	CATG	9 cut(s)	37, 49, 547, 823, 922, 1141, 1417, 1516, 2531
KasI	GGCGCC	3 cut(s)	220, 827, 1421
Kpn2I	TCCGGA	1 cut(s)	326
KroI	GCCGGC	3 cut(s)	85, 211, 1994
KroNI	GCCGGC	3 cut(s)	87, 213, 1996
KspI	CCGCGG	1 cut(s)	219
LmnI	GCTCC	8 cut(s)	272, 329, 736, 1330, 1699, 2122, 2506, 2605
Lsp1109I	GCAGC	9 cut(s)	259, 1678, 1746, 1749, 1929, 1983, 2265, 2598, 2620
LweI	GCATC	2 cut(s)	2237, 2632
MaeI	CTAG	5 cut(s)	948, 1542, 1587, 2040, 2442
MaeII	ACGT	5 cut(s)	495, 1089, 2136, 2327, 2357
MaeIII	GTNAC	5 cut(s)	189, 511, 950, 1105, 1544
MbiI	CCGCTC	2 cut(s)	652, 1246
MfeI	CAATTG	2 cut(s)	891, 1485
MflI	RGATCY	3 cut(s)	757, 1351, 1932
MhlI	GDGCHC	6 cut(s)	342, 731, 918, 1325, 1512, 2268
MluCI	AATT	6 cut(s)	891, 1485, 1747, 1753, 1759, 2451
MluI	ACGCGT	1 cut(s)	24
Mly113I	GGCGCC	3 cut(s)	221, 828, 1422
MlyI	GAGTC	7 cut(s)	632, 902, 1226, 1496, 1672, 2300, 2357
MmeI	TCCRAC	6 cut(s)	174, 624, 1218, 2034, 2043, 2319
MroI	TCCGGA	1 cut(s)	326
MroNI	GCCGGC	3 cut(s)	85, 211, 1994
MseI	TTAA	2 cut(s)	2330, 2382
MspA1I	CMGCKG	4 cut(s)	218, 250, 1974, 2128
MunI	CAATTG	2 cut(s)	891, 1485
MvaI	CCWGG	3 cut(s)	233, 277, 1696
MvnI	CGCG	5 cut(s)	26, 173, 218, 755, 1349
NaeI	GCCGGC	3 cut(s)	87, 213, 1996
NarI	GGCGCC	3 cut(s)	221, 828, 1422
NcoI	CCATGG	2 cut(s)	819, 1413
NgoMIV	GCCGGC	3 cut(s)	85, 211, 1994
NlaIII	CATG	9 cut(s)	37, 49, 547, 823, 922, 1141, 1417, 1516, 2531
NmeAIII	GCCGAG	4 cut(s)	511, 620, 1105, 1214
NmuCI	GTSAC	3 cut(s)	189, 511, 1105
NspV	TTCGAA	3 cut(s)	1751, 1757, 2213
PagI	TCATGA	1 cut(s)	45
PcsI	WCGNNNNNNNCGW	9 cut(s)	348, 407, 564, 1016, 1158, 1610, 1737, 1907, 2031
PdiI	GCCGGC	3 cut(s)	87, 213, 1996
Pfl23II	CGTACG	1 cut(s)	315
PflFI	GACNNNGTC	6 cut(s)	406, 494, 663, 1088, 1257, 2290
PflMI	CCANNNNNTGG	1 cut(s)	303
PleI	GAGTC	7 cut(s)	632, 902, 1226, 1496, 1672, 2299, 2356
PluTI	GGCGCC	3 cut(s)	224, 831, 1425
PmaCI	CACGTG	1 cut(s)	2137
PmlI	CACGTG	1 cut(s)	2137
PpsI	GAGTC	7 cut(s)	632, 902, 1226, 1496, 1672, 2299, 2356
Ppu21I	YACGTR	1 cut(s)	2137
PpuMI	RGGWCCY	3 cut(s)	938, 1532, 2305
PshAI	GACNNNNGTC	2 cut(s)	689, 1283
Psp124BI	GAGCTC	1 cut(s)	2268
Psp5II	RGGWCCY	3 cut(s)	938, 1532, 2305
Psp6I	CCWGG	3 cut(s)	231, 275, 1694
PspCI	CACGTG	1 cut(s)	2137
PspFI	CCCAGC	3 cut(s)	81, 90, 1662
PspGI	CCWGG	3 cut(s)	231, 275, 1694
PspLI	CGTACG	1 cut(s)	315
PspPPI	RGGWCCY	3 cut(s)	938, 1532, 2305
PstNI	CAGNNNCTG	1 cut(s)	262
PsuI	RGATCY	3 cut(s)	757, 1351, 1932
PsyI	GACNNNGTC	6 cut(s)	406, 494, 663, 1088, 1257, 2290
RsaI	GTAC	8 cut(s)	317, 428, 946, 1038, 1540, 1632, 1674, 2523
RsaNI	GTAC	8 cut(s)	316, 427, 945, 1037, 1539, 1631, 1673, 2522
Rsr2I	CGGWCCG	2 cut(s)	625, 1219
RsrII	CGGWCCG	2 cut(s)	625, 1219
SacI	GAGCTC	1 cut(s)	2268
SacII	CCGCGG	1 cut(s)	219
SaqAI	TTAA	2 cut(s)	2330, 2382
ScaI	AGTACT	2 cut(s)	946, 1540
SchI	GAGTC	7 cut(s)	632, 902, 1226, 1496, 1672, 2300, 2357
SduI	GDGCHC	6 cut(s)	342, 731, 918, 1325, 1512, 2268
SfaNI	GCATC	2 cut(s)	2237, 2632
SfcI	CTRYAG	2 cut(s)	680, 1274
SfoI	GGCGCC	3 cut(s)	222, 829, 1423
Sfr303I	CCGCGG	1 cut(s)	219
SfuI	TTCGAA	3 cut(s)	1751, 1757, 2213
SgrBI	CCGCGG	1 cut(s)	219
SmaI	CCCGGG	1 cut(s)	1063
SmlI	CTYRAG	1 cut(s)	2267
SmoI	CTYRAG	1 cut(s)	2267
SpeI	ACTAGT	2 cut(s)	947, 1541
Sse9I	AATT	6 cut(s)	891, 1485, 1747, 1753, 1759, 2451
SspDI	GGCGCC	3 cut(s)	220, 827, 1421
SspMI	CTAG	5 cut(s)	948, 1542, 1587, 2040, 2442
SstI	GAGCTC	1 cut(s)	2268
StyI	CCWWGG	2 cut(s)	819, 1413
TaaI	ACNGT	4 cut(s)	1829, 1965, 2054, 2575
TaiI	ACGT	5 cut(s)	498, 1092, 2139, 2330, 2360
TasI	AATT	6 cut(s)	891, 1485, 1747, 1753, 1759, 2451
TatI	WGTACW	6 cut(s)	944, 1036, 1538, 1630, 1672, 2521
Tru1I	TTAA	2 cut(s)	2330, 2382
Tru9I	TTAA	2 cut(s)	2330, 2382
TscAI	CASTG	5 cut(s)	520, 918, 1114, 1512, 1834
TseFI	GTSAC	3 cut(s)	189, 511, 1105
TseI	GCWGC	9 cut(s)	247, 1666, 1734, 1737, 1917, 1971, 2278, 2586, 2608
Tsp45I	GTSAC	3 cut(s)	189, 511, 1105
TspDTI	ATGAA	4 cut(s)	17, 34, 779, 1373
TspGWI	ACGGA	9 cut(s)	29, 285, 325, 536, 749, 1130, 1343, 2023, 2303
TspMI	CCCGGG	1 cut(s)	1061
TspRI	CASTG	5 cut(s)	520, 918, 1114, 1512, 1834
Tth111I	GACNNNGTC	6 cut(s)	406, 494, 663, 1088, 1257, 2290
Van91I	CCANNNNNTGG	1 cut(s)	303
VneI	GTGCAC	2 cut(s)	914, 1508
XapI	RAATTY	4 cut(s)	1747, 1753, 1759, 2451
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2578
XmaI	CCCGGG	1 cut(s)	1061
XspI	CTAG	5 cut(s)	948, 1542, 1587, 2040, 2442
ZraI	GACGTC	2 cut(s)	496, 1090
ZrmI	AGTACT	2 cut(s)	946, 1540

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.