RLG00000002642

CD2 antigen cytoplasmic tail-binding protein

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Forward (+)
37421480 .. 37421875
396 bp
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UTR
Exon/CDS
Intron
RLM00000002642

Sequence Viewer

Length: 324 bp
ATGCCAAGAACCAAGTCAAGGACGCTTGGCTTGATAGCCTCGCAAGTGACGAAGGTTTCAGTTCCGATCGATGAGATTGGGAAGATCAAGAGGCGAATTTTGGATGAGACTGTTTTGCAGGCTCTGAGGAGGCTGAAGGGGAACAAGAAGGAGAAGACGAAGGTGGTGTTTGATCAGTTGACTGAGGATGCTATGACTCTGTCGATGAAGAGTGGGGAGAACAATGTGTGTGATGAGGAGGAGGAGTTTTCCAAAAGGGAGGCACAGGAGTATGAGAGTTCGGCTAAAGCAAGAATATGTAGGCTGCTACTGAGTCGGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

108

Amino Acids

12.23

Weight (kDa)

9.39

Isoelectric Point (pI)

59.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 96
AcuI CTGAAG 1 cut(s) 155
AfiI CCNNNNNNNGG 1 cut(s) 18
Alw26I GTCTC 1 cut(s) 101
AlwNI CAGNNNCTG 1 cut(s) 124
ApeKI GCWGC 1 cut(s) 304
ApoI RAATTY 1 cut(s) 96
BbsI GAAGAC 1 cut(s) 161
BbvI GCAGC 1 cut(s) 291
BclI TGATCA 1 cut(s) 172
BcoDI GTCTC 1 cut(s) 101
BisI GCNGC 1 cut(s) 305
BlsI GCNGC 1 cut(s) 306
BmsI GCATC 1 cut(s) 178
BpiI GAAGAC 1 cut(s) 161
Bsa29I ATCGAT 1 cut(s) 69
BsaXI ACNNNNNCTCC 2 cut(s) 230, 260
Bsc4I CCNNNNNNNGG 1 cut(s) 18
BseCI ATCGAT 1 cut(s) 69
BseGI GGATG 2 cut(s) 109, 193
BseLI CCNNNNNNNGG 1 cut(s) 18
BseMII CTCAG 3 cut(s) 116, 174, 302
BseRI GAGGAG 4 cut(s) 142, 251, 254, 257
BseXI GCAGC 1 cut(s) 291
Bsh1285I CGRYCG 1 cut(s) 69
BshVI ATCGAT 1 cut(s) 69
BsiEI CGRYCG 1 cut(s) 69
BslI CCNNNNNNNGG 1 cut(s) 18
BsmAI GTCTC 1 cut(s) 101
Bsp143I GATC 3 cut(s) 66, 84, 172
BspCNI CTCAG 3 cut(s) 117, 175, 303
BspDI ATCGAT 1 cut(s) 69
BssMI GATC 3 cut(s) 66, 84, 172
Bst4CI ACNGT 1 cut(s) 112
Bst6I CTCTTC 1 cut(s) 203
BstC8I GCNNGC 1 cut(s) 120
BstDEI CTNAG 3 cut(s) 125, 183, 311
BstF5I GGATG 2 cut(s) 109, 193
BstKTI GATC 3 cut(s) 69, 87, 175
BstMAI GTCTC 1 cut(s) 101
BstMBI GATC 3 cut(s) 66, 84, 172
BstMCI CGRYCG 1 cut(s) 69
BstV1I GCAGC 1 cut(s) 291
BstV2I GAAGAC 1 cut(s) 161
Bsu15I ATCGAT 1 cut(s) 69
BsuTUI ATCGAT 1 cut(s) 69
BtsCI GGATG 2 cut(s) 109, 193
Cac8I GCNNGC 1 cut(s) 120
CaiI CAGNNNCTG 1 cut(s) 124
ClaI ATCGAT 1 cut(s) 69
CseI GACGC 1 cut(s) 31
CviJI RGCY 7 cut(s) 30, 38, 122, 133, 284, 304, 319
CviKI_1 RGCY 7 cut(s) 30, 38, 122, 133, 284, 304, 319
DdeI CTNAG 3 cut(s) 125, 183, 311
DpnI GATC 3 cut(s) 68, 86, 174
DpnII GATC 3 cut(s) 66, 84, 172
Eam1104I CTCTTC 1 cut(s) 203
EarI CTCTTC 1 cut(s) 203
Eco57I CTGAAG 1 cut(s) 155
FaiI YATR 3 cut(s) 194, 273, 298
FbaI TGATCA 1 cut(s) 172
Fnu4HI GCNGC 1 cut(s) 305
FokI GGATG 2 cut(s) 116, 200
Fsp4HI GCNGC 1 cut(s) 305
GluI GCNGC 1 cut(s) 305
HgaI GACGC 1 cut(s) 31
HincII GTYRAC 1 cut(s) 180
HindII GTYRAC 1 cut(s) 180
HinfI GANTC 2 cut(s) 196, 313
Hpy166II GTNNAC 1 cut(s) 180
Hpy188I TCNGA 2 cut(s) 66, 126
Hpy188III TCNNGA 1 cut(s) 88
Hpy8I GTNNAC 1 cut(s) 180
HpyAV CCTTC 4 cut(s) 46, 130, 142, 154
HpyCH4III ACNGT 1 cut(s) 112
HpyCH4V TGCA 1 cut(s) 118
HpyF3I CTNAG 3 cut(s) 125, 183, 311
Ksp22I TGATCA 1 cut(s) 172
Kzo9I GATC 3 cut(s) 66, 84, 172
LpnPI CCDG 2 cut(s) 104, 251
Lsp1109I GCAGC 1 cut(s) 291
LweI GCATC 1 cut(s) 178
MaeIII GTNAC 1 cut(s) 46
MalI GATC 3 cut(s) 68, 86, 174
MboI GATC 3 cut(s) 66, 84, 172
MboII GAAGA 3 cut(s) 94, 166, 220
MluCI AATT 1 cut(s) 96
MlyI GAGTC 2 cut(s) 190, 322
MnlI CCTC 9 cut(s) 49, 84, 120, 123, 178, 229, 232, 235, 253
NdeII GATC 3 cut(s) 66, 84, 172
NmuCI GTSAC 1 cut(s) 46
PcsI WCGNNNNNNNCGW 1 cut(s) 47
PflFI GACNNNGTC 1 cut(s) 199
PkrI GCNGC 1 cut(s) 306
Ple19I CGATCG 1 cut(s) 69
PleI GAGTC 2 cut(s) 190, 321
PpsI GAGTC 2 cut(s) 190, 321
PstNI CAGNNNCTG 1 cut(s) 124
PsyI GACNNNGTC 1 cut(s) 199
PvuI CGATCG 1 cut(s) 69
SatI GCNGC 1 cut(s) 305
Sau3AI GATC 3 cut(s) 66, 84, 172
SchI GAGTC 2 cut(s) 190, 322
SetI ASST 2 cut(s) 57, 165
SfaNI GCATC 1 cut(s) 178
Sse9I AATT 1 cut(s) 96
TaaI ACNGT 1 cut(s) 112
TaqI TCGA 2 cut(s) 69, 203
TasI AATT 1 cut(s) 96
TseFI GTSAC 1 cut(s) 46
TseI GCWGC 1 cut(s) 304
Tsp45I GTSAC 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 221
Tth111I GACNNNGTC 1 cut(s) 199
XapI RAATTY 1 cut(s) 96
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.