Rh7AG120100

CD2 antigen cytoplasmic tail-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0003252
Physical Location & Seq
Forward (+)
9400960 .. 9402072
1113 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG120100.1

Sequence Viewer

Length: 1113 bp
ATGGCCGGAAAGCCTCCGCCGGCGAAGAAGGTTAGGTTTCCGAAGGGGAAGAAGGTGAAGCCGGAAGACGAACAAGCCAGAGTCGGTGGCGGTGGCGATGCGATCGGTCCGACGCCGCAGACGGACGCTAGCCTCGCTGCGAAAGAGCGCGCGAAGCGCCGCAGCAGCCGAATCTCCGAGCTCTGCAAGGACGACGACGCCTCCGCCGCTGAGGTCAGTTACCGGGGACTGGACTACGAGAACTTCGTCGAGGACGGCGTTCAGTTTGAGCCGTTTAACTTGGAGAAGGAGAGAGAAGAAGGCTATTTTGATGCGGATGGGAATTTTGTGGAGTATGTGGAGAAGAATCAAGTGAAGGATGCTTGGCTTGATAGCATCACCAAAGCTGTTGATCCAGAAACGACGAAGAAATTCGCTGAGAAAAACGGTGGTGGGGGTGAAGGTGATGATGAAGTTGGTCAGGATTTGAGTTCCGATGAGATTGGGAAGATTAAGAGGCGGATTGCGGATGTGCTGGAGCCGGAGGAGACTGTTTTGCAGGCTCTGAGGAGGCTGAAGGGGAACAAGAAGGAGAAGATGTTGGCGGAGACGAAGGCGGTGTTTGATCAGTTGACTGAGGATGCTATGGTGTTGATGATGAAGAATGGGGAGAACAATGTGTATGATGAGGAGAAGGAGGTTTTCGAGAGGGAGGCGCAGGGGTATGAGAGTTTGGCTAAGGCGAGAATGGGGGGAGGGAAGTCGATATTGGAGGAGCTCGAAACCGATGCTGGGACGTCAAATTCGATTGCGTCCATTGGTGGTGGTGGTGGTGGTGGTGTGGCTGATGATGATGCATTCGATATGTTTGGGGATGATGATGAGCCTGCAGTTGTGGCGAATGCTGCTGTGCCGGGTTTGGAGAATAATGGTGGAGGATTGGGGAATGATTATGTGTTTGATGATGCTTCTGGGTACTATTATAGCCACAGCTTGGGGTACTATTATGATCCAACTACAGGGTTGTATTGCTCAGCTGCTTCGGGGTTGTGGTACTCGTACAATGAGGAGACTGGGGCATATGATGAAGTTGCACACCAGGCACCTGAGGCTGCCGCTGCTGCTGTGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

370

Amino Acids

39.92

Weight (kDa)

4.43

Isoelectric Point (pI)

39.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OCRE PF17780 309 - 357 4e-17 OCRE domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 779
AccB1I GGYRCC 1 cut(s) 1081
AccB7I CCANNNNNTGG 1 cut(s) 973
AccII CGCG 2 cut(s) 150, 152
AclWI GGATC 2 cut(s) 386, 983
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 322, 410, 781
AcuI CTGAAG 1 cut(s) 575
AcyI GRCGYC 3 cut(s) 113, 198, 776
AfaI GTAC 4 cut(s) 956, 980, 1034, 1040
AfiI CCNNNNNNNGG 4 cut(s) 229, 771, 973, 998
AjnI CCWGG 1 cut(s) 1077
AjuI GAANNNNNNNTTGG 2 cut(s) 731, 763
AluBI AGCT 5 cut(s) 181, 386, 757, 972, 1016
AluI AGCT 5 cut(s) 181, 386, 757, 972, 1016
Alw21I GWGCWC 2 cut(s) 183, 759
Alw26I GTCTC 3 cut(s) 521, 581, 1043
AlwI GGATC 2 cut(s) 386, 983
AlwNI CAGNNNCTG 1 cut(s) 544
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 8 cut(s) 137, 162, 165, 884, 1016, 1091, 1097, 1100
ApoI RAATTY 3 cut(s) 322, 410, 781
ArsI GACNNNNNNTTYG 2 cut(s) 766, 798
Asp700I GAANNNNTTC 1 cut(s) 410
AspLEI GCGC 4 cut(s) 150, 152, 159, 697
AspS9I GGNCC 1 cut(s) 107
AsuC2I CCSGG 2 cut(s) 224, 894
AsuHPI GGTGA 4 cut(s) 67, 370, 449, 455
AsuNHI GCTAGC 1 cut(s) 128
AvaII GGWCC 1 cut(s) 107
AxyI CCTNAGG 1 cut(s) 1086
BanI GGYRCC 1 cut(s) 1081
BanII GRGCYC 2 cut(s) 183, 759
BbsI GAAGAC 1 cut(s) 72
Bbv12I GWGCWC 2 cut(s) 183, 759
BbvCI CCTCAGC 1 cut(s) 210
BbvI GCAGC 8 cut(s) 124, 174, 177, 871, 1003, 1078, 1084, 1087
BccI CCATC 1 cut(s) 311
BceAI ACGGC 2 cut(s) 256, 271
BcgI CGANNNNNNTGC 2 cut(s) 749, 783
BciT130I CCWGG 1 cut(s) 1079
BclI TGATCA 1 cut(s) 604
BcnI CCSGG 2 cut(s) 224, 894
BcoDI GTCTC 3 cut(s) 521, 581, 1043
BfaI CTAG 1 cut(s) 129
BfmI CTRYAG 2 cut(s) 867, 996
BfoI RGCGCY 1 cut(s) 160
BlpI GCTNAGC 1 cut(s) 1012
Bme1390I CCNGG 3 cut(s) 224, 894, 1079
Bme18I GGWCC 1 cut(s) 107
BmgT120I GGNCC 1 cut(s) 107
BmiI GGNNCC 2 cut(s) 519, 1083
BmrFI CCNGG 3 cut(s) 224, 894, 1079
BmrI ACTGGG 1 cut(s) 1062
BmsI GCATC 8 cut(s) 88, 301, 349, 384, 610, 757, 823, 934
BmtI GCTAGC 1 cut(s) 132
BmuI ACTGGG 1 cut(s) 1062
BpiI GAAGAC 1 cut(s) 72
BpmI CTGGAG 1 cut(s) 536
Bpu10I CCTNAGC 2 cut(s) 210, 717
Bpu1102I GCTNAGC 1 cut(s) 1012
BpuMI CCSGG 2 cut(s) 224, 894
BsaHI GRCGYC 3 cut(s) 113, 198, 776
BsaJI CCNNGG 1 cut(s) 223
BsaXI ACNNNNNCTCC 4 cut(s) 185, 215, 563, 593
Bsc4I CCNNNNNNNGG 4 cut(s) 229, 771, 973, 998
Bse118I RCCGGY 1 cut(s) 19
Bse1I ACTGG 2 cut(s) 234, 1057
Bse21I CCTNAGG 1 cut(s) 1086
BseBI CCWGG 1 cut(s) 1079
BseDI CCNNGG 1 cut(s) 223
BseGI GGATG 5 cut(s) 322, 364, 514, 625, 859
BseLI CCNNNNNNNGG 4 cut(s) 229, 771, 973, 998
BseMII CTCAG 6 cut(s) 201, 408, 536, 606, 1026, 1077
BseNI ACTGG 2 cut(s) 234, 1057
BsePI GCGCGC 1 cut(s) 148
BseRI GAGGAG 5 cut(s) 539, 562, 683, 767, 1061
BseXI GCAGC 8 cut(s) 124, 174, 177, 871, 1003, 1078, 1084, 1087
BseYI CCCAGC 1 cut(s) 770
Bsh1236I CGCG 2 cut(s) 150, 152
Bsh1285I CGRYCG 1 cut(s) 105
BshFI GGCC 1 cut(s) 5
BshNI GGYRCC 1 cut(s) 1081
BsiEI CGRYCG 1 cut(s) 105
BsiHKAI GWGCWC 2 cut(s) 183, 759
BsiSI CCGG 6 cut(s) 6, 20, 62, 223, 521, 893
BslFI GGGAC 2 cut(s) 240, 787
BslI CCNNNNNNNGG 4 cut(s) 229, 771, 973, 998
BsmAI GTCTC 3 cut(s) 521, 581, 1043
BsmBI CGTCTC 1 cut(s) 581
BsmFI GGGAC 2 cut(s) 240, 787
BsmI GAATGC 2 cut(s) 836, 886
BsnI GGCC 1 cut(s) 5
Bsp1286I GDGCHC 2 cut(s) 183, 759
Bsp143I GATC 4 cut(s) 102, 391, 604, 988
Bsp1720I GCTNAGC 1 cut(s) 1012
BspANI GGCC 1 cut(s) 5
BspCNI CTCAG 6 cut(s) 202, 409, 537, 607, 1025, 1078
BspFNI CGCG 2 cut(s) 150, 152
BspLI GGNNCC 2 cut(s) 519, 1083
BspMAI CTGCAG 1 cut(s) 871
BspOI GCTAGC 1 cut(s) 132
BspPI GGATC 2 cut(s) 386, 983
BspT107I GGYRCC 1 cut(s) 1081
BsrFI RCCGGY 1 cut(s) 19
BsrI ACTGG 2 cut(s) 234, 1057
BssAI RCCGGY 1 cut(s) 19
BssECI CCNNGG 1 cut(s) 223
BssHII GCGCGC 1 cut(s) 148
BssMI GATC 4 cut(s) 102, 391, 604, 988
BssNI GRCGYC 3 cut(s) 113, 198, 776
Bst2UI CCWGG 1 cut(s) 1079
Bst4CI ACNGT 2 cut(s) 428, 532
BstACI GRCGYC 3 cut(s) 113, 198, 776
BstC8I GCNNGC 5 cut(s) 21, 130, 150, 540, 867
BstDEI CTNAG 7 cut(s) 210, 417, 545, 615, 717, 1012, 1086
BstF5I GGATG 5 cut(s) 322, 364, 514, 625, 859
BstFNI CGCG 2 cut(s) 150, 152
BstH2I RGCGCY 1 cut(s) 160
BstHHI GCGC 4 cut(s) 150, 152, 159, 697
BstKTI GATC 4 cut(s) 105, 394, 607, 991
BstMAI GTCTC 3 cut(s) 521, 581, 1043
BstMBI GATC 4 cut(s) 102, 391, 604, 988
BstMCI CGRYCG 1 cut(s) 105
BstNI CCWGG 1 cut(s) 1079
BstSCI CCNGG 3 cut(s) 222, 892, 1077
BstSFI CTRYAG 2 cut(s) 867, 996
BstUI CGCG 2 cut(s) 150, 152
BstV1I GCAGC 8 cut(s) 124, 174, 177, 871, 1003, 1078, 1084, 1087
BstV2I GAAGAC 1 cut(s) 72
Bsu36I CCTNAGG 1 cut(s) 1086
BsuRI GGCC 1 cut(s) 5
BtgZI GCGATG 1 cut(s) 111
BtsCI GGATG 5 cut(s) 322, 364, 514, 625, 859
Cac8I GCNNGC 5 cut(s) 21, 130, 150, 540, 867
CaiI CAGNNNCTG 1 cut(s) 544
CfoI GCGC 4 cut(s) 150, 152, 159, 697
Cfr10I RCCGGY 1 cut(s) 19
Cfr13I GGNCC 1 cut(s) 107
CpoI CGGWCCG 1 cut(s) 107
CseI GACGC 4 cut(s) 121, 134, 206, 780
Csp6I GTAC 4 cut(s) 955, 979, 1033, 1039
CspI CGGWCCG 1 cut(s) 107
CviQI GTAC 4 cut(s) 955, 979, 1033, 1039
DdeI CTNAG 7 cut(s) 210, 417, 545, 615, 717, 1012, 1086
DpnI GATC 4 cut(s) 104, 393, 606, 990
DpnII GATC 4 cut(s) 102, 391, 604, 988
EaeI YGGCCR 1 cut(s) 3
EciI GGCGGA 4 cut(s) 6, 193, 514, 599
Ecl136II GAGCTC 2 cut(s) 181, 757
Eco24I GRGCYC 2 cut(s) 183, 759
Eco47I GGWCC 1 cut(s) 107
Eco53kI GAGCTC 2 cut(s) 181, 757
Eco57I CTGAAG 1 cut(s) 575
Eco81I CCTNAGG 1 cut(s) 1086
EcoICRI GAGCTC 2 cut(s) 181, 757
EcoRII CCWGG 1 cut(s) 1077
EcoT22I ATGCAT 1 cut(s) 838
EcoT38I GRGCYC 2 cut(s) 183, 759
Esp3I CGTCTC 1 cut(s) 581
FaqI GGGAC 2 cut(s) 240, 787
FauNDI CATATG 1 cut(s) 1060
FbaI TGATCA 1 cut(s) 604
FokI GGATG 5 cut(s) 329, 371, 521, 632, 866
FriOI GRGCYC 2 cut(s) 183, 759
FspBI CTAG 1 cut(s) 129
GlaI GCGC 4 cut(s) 149, 151, 158, 696
GsaI CCCAGC 1 cut(s) 774
GsuI CTGGAG 1 cut(s) 536
HaeII RGCGCY 1 cut(s) 160
HaeIII GGCC 1 cut(s) 5
HapII CCGG 6 cut(s) 6, 20, 62, 223, 521, 893
HgaI GACGC 4 cut(s) 121, 134, 206, 780
HhaI GCGC 4 cut(s) 150, 152, 159, 697
Hin1I GRCGYC 3 cut(s) 113, 198, 776
Hin6I GCGC 4 cut(s) 148, 150, 157, 695
HinP1I GCGC 4 cut(s) 148, 150, 157, 695
HincII GTYRAC 1 cut(s) 612
HindII GTYRAC 1 cut(s) 612
HinfI GANTC 3 cut(s) 81, 171, 346
HpaII CCGG 6 cut(s) 6, 20, 62, 223, 521, 893
HphI GGTGA 4 cut(s) 67, 370, 449, 455
Hpy166II GTNNAC 1 cut(s) 612
Hpy188I TCNGA 5 cut(s) 42, 111, 178, 475, 546
Hpy188III TCNNGA 3 cut(s) 395, 461, 685
Hpy8I GTNNAC 1 cut(s) 612
Hpy99I CGWCG 5 cut(s) 115, 197, 200, 251, 406
HpyCH4III ACNGT 2 cut(s) 428, 532
HpyCH4IV ACGT 1 cut(s) 776
HpyCH4V TGCA 5 cut(s) 186, 538, 836, 869, 1073
HpyF3I CTNAG 7 cut(s) 210, 417, 545, 615, 717, 1012, 1086
HpySE526I ACGT 1 cut(s) 776
Hsp92I GRCGYC 3 cut(s) 113, 198, 776
HspAI GCGC 4 cut(s) 148, 150, 157, 695
KroI GCCGGC 1 cut(s) 19
KroNI GCCGGC 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 604
Kzo9I GATC 4 cut(s) 102, 391, 604, 988
LmnI GCTCC 2 cut(s) 517, 754
Lsp1109I GCAGC 8 cut(s) 124, 174, 177, 871, 1003, 1078, 1084, 1087
LweI GCATC 8 cut(s) 88, 301, 349, 384, 610, 757, 823, 934
MaeI CTAG 1 cut(s) 129
MaeII ACGT 1 cut(s) 776
MaeIII GTNAC 1 cut(s) 218
MalI GATC 4 cut(s) 104, 393, 606, 990
MboI GATC 4 cut(s) 102, 391, 604, 988
MboII GAAGA 9 cut(s) 37, 61, 77, 308, 355, 418, 499, 586, 652
MhlI GDGCHC 2 cut(s) 183, 759
MluCI AATT 4 cut(s) 322, 410, 781, 1108
MlyI GAGTC 1 cut(s) 90
MmeI TCCRAC 2 cut(s) 134, 1016
Mph1103I ATGCAT 1 cut(s) 838
MreI CGCCGGCG 1 cut(s) 19
MroNI GCCGGC 1 cut(s) 19
MroXI GAANNNNTTC 1 cut(s) 410
MseI TTAA 2 cut(s) 276, 492
MspA1I CMGCKG 3 cut(s) 209, 1016, 1097
MspI CCGG 6 cut(s) 6, 20, 62, 223, 521, 893
MspR9I CCNGG 3 cut(s) 224, 894, 1079
Mva1269I GAATGC 2 cut(s) 836, 886
MvaI CCWGG 1 cut(s) 1079
MvnI CGCG 2 cut(s) 150, 152
NaeI GCCGGC 1 cut(s) 21
NciI CCSGG 2 cut(s) 224, 894
NdeI CATATG 1 cut(s) 1060
NdeII GATC 4 cut(s) 102, 391, 604, 988
NgoMIV GCCGGC 1 cut(s) 19
NheI GCTAGC 1 cut(s) 128
NlaIV GGNNCC 2 cut(s) 519, 1083
NsiI ATGCAT 1 cut(s) 838
PauI GCGCGC 1 cut(s) 148
PcsI WCGNNNNNNNCGW 3 cut(s) 243, 255, 782
PctI GAATGC 2 cut(s) 836, 886
PdiI GCCGGC 1 cut(s) 21
PdmI GAANNNNTTC 1 cut(s) 410
PfeI GAWTC 2 cut(s) 171, 346
PflMI CCANNNNNTGG 1 cut(s) 973
Ple19I CGATCG 1 cut(s) 105
PleI GAGTC 1 cut(s) 89
PpsI GAGTC 1 cut(s) 89
Psp124BI GAGCTC 2 cut(s) 183, 759
Psp6I CCWGG 1 cut(s) 1077
PspFI CCCAGC 1 cut(s) 770
PspGI CCWGG 1 cut(s) 1077
PspN4I GGNNCC 2 cut(s) 519, 1083
PspPI GGNCC 1 cut(s) 107
PstI CTGCAG 1 cut(s) 871
PstNI CAGNNNCTG 1 cut(s) 544
PteI GCGCGC 1 cut(s) 148
PvuI CGATCG 1 cut(s) 105
PvuII CAGCTG 1 cut(s) 1016
RsaI GTAC 4 cut(s) 956, 980, 1034, 1040
RsaNI GTAC 4 cut(s) 955, 979, 1033, 1039
Rsr2I CGGWCCG 1 cut(s) 107
RsrII CGGWCCG 1 cut(s) 107
SacI GAGCTC 2 cut(s) 183, 759
SaqAI TTAA 2 cut(s) 276, 492
Sau3AI GATC 4 cut(s) 102, 391, 604, 988
Sau96I GGNCC 1 cut(s) 107
SchI GAGTC 1 cut(s) 90
ScrFI CCNGG 3 cut(s) 224, 894, 1079
SduI GDGCHC 2 cut(s) 183, 759
SfaNI GCATC 8 cut(s) 88, 301, 349, 384, 610, 757, 823, 934
SfcI CTRYAG 2 cut(s) 867, 996
SgrAI CRCCGGYG 1 cut(s) 19
SinI GGWCC 1 cut(s) 107
Sse9I AATT 4 cut(s) 322, 410, 781, 1108
SspMI CTAG 1 cut(s) 129
SstI GAGCTC 2 cut(s) 183, 759
StyD4I CCNGG 3 cut(s) 222, 892, 1077
TaaI ACNGT 2 cut(s) 428, 532
TaiI ACGT 1 cut(s) 779
TaqI TCGA 6 cut(s) 249, 684, 743, 759, 785, 840
TaqII GACCGA 1 cut(s) 95
TasI AATT 4 cut(s) 322, 410, 781, 1108
TauI GCSGC 4 cut(s) 118, 162, 209, 1097
TfiI GAWTC 2 cut(s) 171, 346
Tru1I TTAA 2 cut(s) 276, 492
Tru9I TTAA 2 cut(s) 276, 492
TseI GCWGC 8 cut(s) 137, 162, 165, 884, 1016, 1091, 1097, 1100
TspDTI ATGAA 3 cut(s) 465, 653, 1080
TspGWI ACGGA 1 cut(s) 137
Van91I CCANNNNNTGG 1 cut(s) 973
VpaK11BI GGWCC 1 cut(s) 107
XapI RAATTY 3 cut(s) 322, 410, 781
XmnI GAANNNNTTC 1 cut(s) 410
XspI CTAG 1 cut(s) 129
ZraI GACGTC 1 cut(s) 777
Zsp2I ATGCAT 1 cut(s) 838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.