RLG00000003382

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
OG0003301
Physical Location & Seq
Reverse (-)
47840633 .. 47844157
3525 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000003382

Sequence Viewer

Length: 2103 bp
ATGGACCAGAGGTTGAAGAAGGCTTCTCAATCTGGAGATATTGATTTCTTGTACAGATTGATTATGGAGGATGGTGAACTTCTAGATCACATTACTGGGGCATCATTTGTCGATACTCCTCTACACATAGCTGCTGCCGAAGGGCATACACAGTTTGCCATGGAGATAATGAGGCTAAAGCCATCATTTGCTAGGAAGCCGAACCAAGATGGATTTAGTCCCATGCACTTGGCCCTGCAAAGTGGAAAAACCAGGATGGTGGTTCGTCTCCTAGATGCTGATAGAAGCCTTGTTCGGGTGCCAGGGAGGGAGGGTGTGACACCCTTGCACTATGTAGCCAAGGAAGGAAATATCGGACTCTTAGAAGTGTTTCTATCGGCCTGCCCAAAATCCTTGGAGGATGTGACAATTCGAAACGAGACCTCTCTGCATATTGCGCTGAAAAATGACAAGGTCGAAGCATTTGAATTTGTGTTGACATGGCTAAAAGAGGTCTGTTATGAAGAGGTACATCAACTGGAGAAAAAGGTATTGAACTGGAAGGATGAGGACGGCAACACTTTGTTGCACATTGCAACACTTAGAAATCAACCTGAGGCAGTTATGCTTTTATTGACCTCACAAGTTGATGTAAACTTAAAGAATTTGGCGGGTTGGACTCCCCTGGACATCATACAGCATCAACAGCCACTGAATGACAGACGAATAAGGACTATGCTATGTGGTGCTGGAGCTCTTGAAGGATCTTCAGTTCTGTCTGTTCCAACCTTTAGCACGGATCAAAGGTTGAAGCAGGCTGCGCAAGGGGGGAATATTGGTGGCCTGTATGCACTGTTACAGGAGGACTCATATATATTGGAGCGCATCAACCTTGTTCCATTTGCTGATACTCCTTTGCACATTGCTGCATCTTCGGGGCATACCGATTTTGCCATGGAGATGATGAGATTGAAGCCAGAATTTGCAAGGAAGCAAAACCCGGAAGGCTTCAGCGCAATGCACCTTGCTTTGAAGCAAGGAAAAACACAAACATTGCTTTTTCTCCTATCCGTCTATAGGGACCTTGTCCGAGTCAAAGGAAGGGAGGGAAAGACTCTCTTGCATTATGCAGCCGAAATTGGAAACTTTGATCTTTTGGCTGAGTTTTTAGCAGCTTCCCCAGAGTCTATCATAGATCTGACAATTCGAAAAGAAACTGCACTTCATGTTGCTGCAAAGAATGACAAGTTGGAAGCACTTGAAGTCTTGATGGGATGGCTTCACCATGTTGATATGGATATGATCTTGCAGTGGACTGATAATGAAGGCAACACTGTACTTCACATTGCAATATTAAGAAATCAATTCCAGGTGGTGAGGTTGTTAATAAAAAGGGTTGATATAAATGCCAAAAATTTGGAGGGTTTAACAGCAATGGACATATCAGATCACCAAGGAATGCATAACAATAATACAGAAATAAGAAGTTTATTACTCCAAAGAGGAGCTTTGAGAGCTTCTTCACTCCCTACACTTCCTACTCTTGCAAATTTTCTAAGAACAGAGATGTCATTGCTCGAAAGATGGGTTATGTGTAGTTACCTCACTAAAAGTTGCATGTCAAATGAGAATCGCAATAATCTTCTAGTGGTAGCTGTCCTGATTGCAACAGCCACATTCCAAGCCGTGCTCAGCCCACCAGCCGGTGTGCAGAAGGATAACTTCAGCACTCCATTTTGTCGTAAAACCAGCAGCGTCGTCGCATCCAATAGTACTGGTGAACCCAATGTACCATCAAACTTTGCCTCTCACTCCATGGTAGCATGGAGTTCTTTCCTGGCTCTGAACACCATGGCTTTCTTGACATCAATATCTGAGATATGGTTTCACCTCCCACGTGGCCTTTATTTTTTGACGAAATTGGGTTTACCACTTTTAGTCTGCTATATGATTTCATTGAGTCTCACGACACCAGTGCTAAGCGTGACGCCTTTTTACTTCGTTCTAATTATTTTATCTCAATTGAAACGCATAGTCAGGTACTTGTTTTTTAAGAGGTCATTGGACATAAAGCTATCCCTGTTGAAGTATTGTCCCGACTTACATAGAGAAATTAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

701

Amino Acids

78.54

Weight (kDa)

7.35

Isoelectric Point (pI)

40.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 7 - 92 2e-07 Ankyrin repeats (3 copies)
Ank_5 PF13857 178 - 224 3.9e-06 Ankyrin repeats (many copies)
Ank_2 PF12796 264 - 350 9.8e-08 Ankyrin repeats (3 copies)
Ank_2 PF12796 361 - 417 9.7e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 367 - 465 4.4e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 401 - 456 1e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 424 - 474 2.6e-10 Ankyrin repeats (many copies)
Ank PF00023 436 - 465 6e-06 Ankyrin repeat
PGG PF13962 535 - 628 7.3e-11 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 801
AccB1I GGYRCC 1 cut(s) 298
AciI CCGC 1 cut(s) 650
AclWI GGATC 2 cut(s) 751, 786
AcsI RAATTY 5 cut(s) 467, 643, 959, 1393, 1528
AcuI CTGAAG 3 cut(s) 732, 973, 1687
AcvI CACGTG 1 cut(s) 1877
AcyI GRCGYC 1 cut(s) 1967
AfaI GTAC 6 cut(s) 53, 510, 1317, 1753, 1770, 2021
AfiI CCNNNNNNNGG 3 cut(s) 295, 1056, 1682
AjnI CCWGG 5 cut(s) 251, 301, 663, 1347, 1815
AjuI GAANNNNNNNTTGG 2 cut(s) 1211, 1243
AloI GAACNNNNNNTCC 2 cut(s) 735, 767
AluBI AGCT 7 cut(s) 131, 734, 1154, 1487, 1496, 1634, 2053
AluI AGCT 7 cut(s) 131, 734, 1154, 1487, 1496, 1634, 2053
Alw21I GWGCWC 2 cut(s) 736, 1671
Alw26I GTCTC 3 cut(s) 272, 413, 1946
AlwI GGATC 2 cut(s) 751, 786
AlwNI CAGNNNCTG 1 cut(s) 691
AoxI GGCC 4 cut(s) 231, 378, 820, 1879
ApeKI GCWGC 8 cut(s) 131, 134, 797, 905, 1109, 1151, 1211, 1731
ApoI RAATTY 5 cut(s) 467, 643, 959, 1393, 1528
Asp700I GAANNNNTTC 1 cut(s) 369
AspLEI GCGC 4 cut(s) 439, 802, 864, 995
AspS9I GGNCC 3 cut(s) 4, 232, 1060
AsuC2I CCSGG 1 cut(s) 980
AsuHPI GGTGA 6 cut(s) 86, 1253, 1366, 1421, 1769, 1859
AsuII TTCGAA 2 cut(s) 412, 1186
AvaII GGWCC 2 cut(s) 4, 1060
AxyI CCTNAGG 1 cut(s) 594
BanI GGYRCC 1 cut(s) 298
BanII GRGCYC 1 cut(s) 736
BbrPI CACGTG 1 cut(s) 1877
Bbv12I GWGCWC 2 cut(s) 736, 1671
BbvI GCAGC 8 cut(s) 118, 121, 784, 892, 1121, 1163, 1198, 1743
BccI CCATC 8 cut(s) 65, 190, 203, 250, 1243, 1248, 1557, 1780
BceAI ACGGC 2 cut(s) 568, 1649
BcgI CGANNNNNNTGC 4 cut(s) 1720, 1754, 1936, 1970
BciT130I CCWGG 5 cut(s) 253, 303, 665, 1349, 1817
BcnI CCSGG 1 cut(s) 980
BcoDI GTCTC 3 cut(s) 272, 413, 1946
BfaI CTAG 4 cut(s) 83, 192, 272, 1625
BfmI CTRYAG 1 cut(s) 1054
BglII AGATCT 1 cut(s) 1174
BisI GCNGC 8 cut(s) 132, 135, 798, 906, 1110, 1152, 1212, 1732
BlpI GCTNAGC 2 cut(s) 1670, 1958
BlsI GCNGC 8 cut(s) 133, 136, 799, 907, 1111, 1153, 1213, 1733
BmcAI AGTACT 1 cut(s) 1753
Bme1390I CCNGG 6 cut(s) 253, 303, 665, 980, 1349, 1817
Bme18I GGWCC 2 cut(s) 4, 1060
BmgT120I GGNCC 3 cut(s) 4, 232, 1060
BmiI GGNNCC 2 cut(s) 300, 1061
BmrFI CCNGG 6 cut(s) 253, 303, 665, 980, 1349, 1817
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 6 cut(s) 110, 265, 688, 873, 917, 1751
BmuI ACTGGG 1 cut(s) 105
BpmI CTGGAG 3 cut(s) 54, 539, 750
Bpu1102I GCTNAGC 2 cut(s) 1670, 1958
Bpu14I TTCGAA 2 cut(s) 412, 1186
BpuMI CCSGG 1 cut(s) 980
BsaAI YACGTR 1 cut(s) 1877
BsaHI GRCGYC 1 cut(s) 1967
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 9 cut(s) 159, 302, 339, 393, 663, 933, 1432, 1794, 1830
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 3 cut(s) 295, 1056, 1682
Bse118I RCCGGY 1 cut(s) 1682
Bse1I ACTGG 5 cut(s) 100, 522, 542, 1759, 1952
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 7 cut(s) 570, 900, 1002, 1031, 1323, 1419, 1550
BseBI CCWGG 5 cut(s) 253, 303, 665, 1349, 1817
BseDI CCNNGG 9 cut(s) 159, 302, 339, 393, 663, 933, 1432, 1794, 1830
BseGI GGATG 6 cut(s) 76, 261, 406, 550, 1259, 1742
BseLI CCNNNNNNNGG 3 cut(s) 295, 1056, 1682
BseMI GCAATG 7 cut(s) 570, 900, 1002, 1031, 1323, 1419, 1550
BseMII CTCAG 4 cut(s) 585, 1131, 1684, 1845
BseNI ACTGG 5 cut(s) 100, 522, 542, 1759, 1952
BseRI GAGGAG 2 cut(s) 108, 1497
BseXI GCAGC 8 cut(s) 118, 121, 784, 892, 1121, 1163, 1198, 1743
BsgI GTGCAG 2 cut(s) 1182, 1709
BshFI GGCC 4 cut(s) 233, 380, 822, 1881
BshNI GGYRCC 1 cut(s) 298
BsiHKAI GWGCWC 2 cut(s) 736, 1671
BsiSI CCGG 2 cut(s) 980, 1683
BslFI GGGAC 3 cut(s) 204, 1073, 2058
BslI CCNNNNNNNGG 3 cut(s) 295, 1056, 1682
BsmAI GTCTC 3 cut(s) 272, 413, 1946
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 3 cut(s) 204, 1073, 2058
BsmI GAATGC 1 cut(s) 1443
BsnI GGCC 4 cut(s) 233, 380, 822, 1881
Bso31I GGTCTC 1 cut(s) 413
Bsp119I TTCGAA 2 cut(s) 412, 1186
Bsp1286I GDGCHC 2 cut(s) 736, 1671
Bsp1407I TGTACA 1 cut(s) 51
Bsp143I GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
Bsp1720I GCTNAGC 2 cut(s) 1670, 1958
Bsp19I CCATGG 4 cut(s) 159, 933, 1794, 1830
BspACI CCGC 1 cut(s) 650
BspANI GGCC 4 cut(s) 233, 380, 822, 1881
BspCNI CTCAG 4 cut(s) 586, 1132, 1683, 1846
BspLI GGNNCC 2 cut(s) 300, 1061
BspPI GGATC 2 cut(s) 751, 786
BspT104I TTCGAA 2 cut(s) 412, 1186
BspT107I GGYRCC 1 cut(s) 298
BspTNI GGTCTC 1 cut(s) 413
BsrDI GCAATG 7 cut(s) 570, 900, 1002, 1031, 1323, 1419, 1550
BsrFI RCCGGY 1 cut(s) 1682
BsrGI TGTACA 1 cut(s) 51
BsrI ACTGG 5 cut(s) 100, 522, 542, 1759, 1952
BssAI RCCGGY 1 cut(s) 1682
BssECI CCNNGG 9 cut(s) 159, 302, 339, 393, 663, 933, 1432, 1794, 1830
BssMI GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
BssNI GRCGYC 1 cut(s) 1967
BssT1I CCWWGG 7 cut(s) 159, 339, 393, 933, 1432, 1794, 1830
Bst2UI CCWGG 5 cut(s) 253, 303, 665, 1349, 1817
Bst4CI ACNGT 3 cut(s) 153, 834, 1315
Bst6I CTCTTC 1 cut(s) 498
BstACI GRCGYC 1 cut(s) 1967
BstAUI TGTACA 1 cut(s) 51
BstBAI YACGTR 1 cut(s) 1877
BstBI TTCGAA 2 cut(s) 412, 1186
BstC8I GCNNGC 2 cut(s) 382, 795
BstDEI CTNAG 8 cut(s) 361, 581, 594, 1140, 1535, 1670, 1854, 1958
BstDSI CCRYGG 4 cut(s) 159, 933, 1794, 1830
BstF5I GGATG 6 cut(s) 76, 261, 406, 550, 1259, 1742
BstHHI GCGC 4 cut(s) 439, 802, 864, 995
BstKTI GATC 7 cut(s) 88, 746, 781, 1132, 1177, 1284, 1429
BstMAI GTCTC 3 cut(s) 272, 413, 1946
BstMBI GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
BstMWI GCNNNNNNNGC 4 cut(s) 436, 685, 799, 1493
BstNI CCWGG 5 cut(s) 253, 303, 665, 1349, 1817
BstNSI RCATGY 1 cut(s) 1600
BstSCI CCNGG 6 cut(s) 251, 301, 663, 978, 1347, 1815
BstSFI CTRYAG 1 cut(s) 1054
BstV1I GCAGC 8 cut(s) 118, 121, 784, 892, 1121, 1163, 1198, 1743
BstX2I RGATCY 2 cut(s) 743, 1174
BstXI CCANNNNNNTGG 3 cut(s) 229, 259, 1396
BstYI RGATCY 2 cut(s) 743, 1174
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 4 cut(s) 233, 380, 822, 1881
BtgI CCRYGG 4 cut(s) 159, 933, 1794, 1830
BtsCI GGATG 6 cut(s) 76, 261, 406, 550, 1259, 1742
BtsI GCAGTG 1 cut(s) 1295
BtsIMutI CAGTG 5 cut(s) 689, 830, 1295, 1311, 1959
Cac8I GCNNGC 2 cut(s) 382, 795
CaiI CAGNNNCTG 1 cut(s) 691
CfoI GCGC 4 cut(s) 439, 802, 864, 995
Cfr10I RCCGGY 1 cut(s) 1682
Cfr13I GGNCC 3 cut(s) 4, 232, 1060
CseI GACGC 2 cut(s) 1723, 1975
Csp6I GTAC 6 cut(s) 52, 509, 1316, 1752, 1769, 2020
CviQI GTAC 6 cut(s) 52, 509, 1316, 1752, 1769, 2020
DdeI CTNAG 8 cut(s) 361, 581, 594, 1140, 1535, 1670, 1854, 1958
DpnI GATC 7 cut(s) 87, 745, 780, 1131, 1176, 1283, 1428
DpnII GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
Ecl136II GAGCTC 1 cut(s) 734
Eco130I CCWWGG 7 cut(s) 159, 339, 393, 933, 1432, 1794, 1830
Eco24I GRGCYC 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 2 cut(s) 4, 1060
Eco53kI GAGCTC 1 cut(s) 734
Eco57I CTGAAG 3 cut(s) 732, 973, 1687
Eco72I CACGTG 1 cut(s) 1877
Eco81I CCTNAGG 1 cut(s) 594
EcoICRI GAGCTC 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 1060
EcoRII CCWGG 5 cut(s) 251, 301, 663, 1347, 1815
EcoT14I CCWWGG 7 cut(s) 159, 339, 393, 933, 1432, 1794, 1830
EcoT22I ATGCAT 1 cut(s) 1443
EcoT38I GRGCYC 1 cut(s) 736
ErhI CCWWGG 7 cut(s) 159, 339, 393, 933, 1432, 1794, 1830
Esp3I CGTCTC 1 cut(s) 272
FalI AAGNNNNNCTT 6 cut(s) 1082, 1114, 1471, 1503, 1685, 1717
FaqI GGGAC 3 cut(s) 204, 1073, 2058
FauI CCCGC 1 cut(s) 643
Fnu4HI GCNGC 8 cut(s) 132, 135, 798, 906, 1110, 1152, 1212, 1732
FokI GGATG 6 cut(s) 83, 268, 413, 557, 1266, 1729
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 8 cut(s) 132, 135, 798, 906, 1110, 1152, 1212, 1732
FspBI CTAG 4 cut(s) 83, 192, 272, 1625
FspI TGCGCA 1 cut(s) 801
GlaI GCGC 4 cut(s) 438, 801, 863, 994
GluI GCNGC 8 cut(s) 132, 135, 798, 906, 1110, 1152, 1212, 1732
GsuI CTGGAG 3 cut(s) 54, 539, 750
HaeIII GGCC 4 cut(s) 233, 380, 822, 1881
HapII CCGG 2 cut(s) 980, 1683
HgaI GACGC 2 cut(s) 1723, 1975
HhaI GCGC 4 cut(s) 439, 802, 864, 995
Hin1I GRCGYC 1 cut(s) 1967
Hin6I GCGC 4 cut(s) 437, 800, 862, 993
HinP1I GCGC 4 cut(s) 437, 800, 862, 993
HincII GTYRAC 1 cut(s) 477
HindII GTYRAC 1 cut(s) 477
HinfI GANTC 8 cut(s) 357, 658, 845, 1071, 1093, 1163, 1609, 1939
HpaII CCGG 2 cut(s) 980, 1683
HphI GGTGA 6 cut(s) 86, 1253, 1366, 1421, 1769, 1859
Hpy166II GTNNAC 6 cut(s) 77, 477, 634, 1293, 1760, 1907
Hpy188I TCNGA 6 cut(s) 356, 1070, 1179, 1426, 1824, 1855
Hpy188III TCNNGA 8 cut(s) 33, 83, 737, 1246, 1639, 1840, 1945, 2075
Hpy8I GTNNAC 6 cut(s) 77, 477, 634, 1293, 1760, 1907
Hpy99I CGWCG 2 cut(s) 1739, 1742
HpyAV CCTTC 9 cut(s) 13, 134, 338, 535, 734, 977, 1074, 1298, 1687
HpyCH4III ACNGT 3 cut(s) 153, 834, 1315
HpyCH4IV ACGT 1 cut(s) 1876
HpyF10VI GCNNNNNNNGC 4 cut(s) 436, 685, 799, 1493
HpyF3I CTNAG 8 cut(s) 361, 581, 594, 1140, 1535, 1670, 1854, 1958
HpySE526I ACGT 1 cut(s) 1876
Hsp92I GRCGYC 1 cut(s) 1967
HspAI GCGC 4 cut(s) 437, 800, 862, 993
Kzo9I GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
LmnI GCTCC 3 cut(s) 731, 859, 1484
Lsp1109I GCAGC 8 cut(s) 118, 121, 784, 892, 1121, 1163, 1198, 1743
LweI GCATC 6 cut(s) 110, 265, 688, 873, 917, 1751
MaeI CTAG 4 cut(s) 83, 192, 272, 1625
MaeII ACGT 1 cut(s) 1876
MaeIII GTNAC 5 cut(s) 316, 403, 834, 1577, 1963
MalI GATC 7 cut(s) 87, 745, 780, 1131, 1176, 1283, 1428
MboI GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
MboII GAAGA 6 cut(s) 28, 515, 738, 903, 1491, 1613
MfeI CAATTG 1 cut(s) 2000
MflI RGATCY 2 cut(s) 743, 1174
MhlI GDGCHC 2 cut(s) 736, 1671
MlyI GAGTC 7 cut(s) 351, 652, 839, 1080, 1087, 1172, 1948
MmeI TCCRAC 3 cut(s) 635, 788, 1209
Mph1103I ATGCAT 1 cut(s) 1443
MroXI GAANNNNTTC 1 cut(s) 369
MseI TTAA 6 cut(s) 638, 1334, 1364, 1406, 2031, 2094
MslI CAYNNNNRTG 1 cut(s) 938
MspI CCGG 2 cut(s) 980, 1683
MspR9I CCNGG 6 cut(s) 253, 303, 665, 980, 1349, 1817
MunI CAATTG 1 cut(s) 2000
Mva1269I GAATGC 1 cut(s) 1443
MvaI CCWGG 5 cut(s) 253, 303, 665, 1349, 1817
MwoI GCNNNNNNNGC 4 cut(s) 436, 685, 799, 1493
NciI CCSGG 1 cut(s) 980
NcoI CCATGG 4 cut(s) 159, 933, 1794, 1830
NdeII GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
NlaIV GGNNCC 2 cut(s) 300, 1061
NmuCI GTSAC 3 cut(s) 316, 403, 1963
NsbI TGCGCA 1 cut(s) 801
NsiI ATGCAT 1 cut(s) 1443
NspI RCATGY 1 cut(s) 1600
NspV TTCGAA 2 cut(s) 412, 1186
PctI GAATGC 1 cut(s) 1443
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 1 cut(s) 1609
PflFI GACNNNGTC 2 cut(s) 452, 1064
PkrI GCNGC 8 cut(s) 133, 136, 799, 907, 1111, 1153, 1213, 1733
PleI GAGTC 7 cut(s) 351, 652, 839, 1079, 1087, 1171, 1947
PmaCI CACGTG 1 cut(s) 1877
PmlI CACGTG 1 cut(s) 1877
PpsI GAGTC 7 cut(s) 351, 652, 839, 1079, 1087, 1171, 1947
Ppu21I YACGTR 1 cut(s) 1877
PpuMI RGGWCCY 1 cut(s) 1060
Psp124BI GAGCTC 1 cut(s) 736
Psp5II RGGWCCY 1 cut(s) 1060
Psp6I CCWGG 5 cut(s) 251, 301, 663, 1347, 1815
PspCI CACGTG 1 cut(s) 1877
PspGI CCWGG 5 cut(s) 251, 301, 663, 1347, 1815
PspN4I GGNNCC 2 cut(s) 300, 1061
PspPI GGNCC 3 cut(s) 4, 232, 1060
PspPPI RGGWCCY 1 cut(s) 1060
PsrI GAACNNNNNNTAC 2 cut(s) 1752, 1784
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 2 cut(s) 743, 1174
PsyI GACNNNGTC 2 cut(s) 452, 1064
RsaI GTAC 6 cut(s) 53, 510, 1317, 1753, 1770, 2021
RsaNI GTAC 6 cut(s) 52, 509, 1316, 1752, 1769, 2020
RseI CAYNNNNRTG 1 cut(s) 938
SacI GAGCTC 1 cut(s) 736
SaqAI TTAA 6 cut(s) 638, 1334, 1364, 1406, 2031, 2094
SatI GCNGC 8 cut(s) 132, 135, 798, 906, 1110, 1152, 1212, 1732
Sau3AI GATC 7 cut(s) 85, 743, 778, 1129, 1174, 1281, 1426
Sau96I GGNCC 3 cut(s) 4, 232, 1060
ScaI AGTACT 1 cut(s) 1753
SchI GAGTC 7 cut(s) 351, 652, 839, 1080, 1087, 1172, 1948
ScrFI CCNGG 6 cut(s) 253, 303, 665, 980, 1349, 1817
SduI GDGCHC 2 cut(s) 736, 1671
SfaNI GCATC 6 cut(s) 110, 265, 688, 873, 917, 1751
SfcI CTRYAG 1 cut(s) 1054
SfuI TTCGAA 2 cut(s) 412, 1186
SinI GGWCC 2 cut(s) 4, 1060
SmiMI CAYNNNNRTG 1 cut(s) 938
SsiI CCGC 1 cut(s) 650
SspI AATATT 2 cut(s) 814, 1332
SspMI CTAG 4 cut(s) 83, 192, 272, 1625
SstI GAGCTC 1 cut(s) 736
StyD4I CCNGG 6 cut(s) 251, 301, 663, 978, 1347, 1815
StyI CCWWGG 7 cut(s) 159, 339, 393, 933, 1432, 1794, 1830
TaaI ACNGT 3 cut(s) 153, 834, 1315
TaiI ACGT 1 cut(s) 1879
TaqI TCGA 5 cut(s) 111, 412, 456, 1186, 1557
TatI WGTACW 3 cut(s) 51, 1315, 1751
TfiI GAWTC 1 cut(s) 1609
Tru1I TTAA 6 cut(s) 638, 1334, 1364, 1406, 2031, 2094
Tru9I TTAA 6 cut(s) 638, 1334, 1364, 1406, 2031, 2094
TscAI CASTG 5 cut(s) 696, 837, 1295, 1318, 1959
TseFI GTSAC 3 cut(s) 316, 403, 1963
TseI GCWGC 8 cut(s) 131, 134, 797, 905, 1109, 1151, 1211, 1731
Tsp45I GTSAC 3 cut(s) 316, 403, 1963
TspDTI ATGAA 4 cut(s) 516, 1193, 1317, 1923
TspGWI ACGGA 2 cut(s) 791, 1039
TspRI CASTG 5 cut(s) 696, 837, 1295, 1318, 1959
Tth111I GACNNNGTC 2 cut(s) 452, 1064
VpaK11BI GGWCC 2 cut(s) 4, 1060
XapI RAATTY 5 cut(s) 467, 643, 959, 1393, 1528
XbaI TCTAGA 1 cut(s) 82
XceI RCATGY 1 cut(s) 1600
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 4 cut(s) 83, 192, 272, 1625
ZrmI AGTACT 1 cut(s) 1753
Zsp2I ATGCAT 1 cut(s) 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.