Rroxscaffold_3G00252390

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0003301
Physical Location & Seq
Reverse (-)
46405463 .. 46408998
3536 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00252390.1

Sequence Viewer

Length: 2115 bp
ATGGACCAGAGGTTGAAGAAGGCTTCTCAATCTGGAGATATTGATTTCTTGTACAGATTGATTATGGAGGATGGTGAACTTCTAGATCACATTACTGGGGCATCATTTGTCGATACTCCTCTACACATAGCTGCTTCCGAAGGGCATATACAGTTTGCCATGGAGATAATGAGGCTAAAGCCATCATTTGCGAGGAAGCCGAACCAAGATGGATTTAATCCCATGCACTTGGCCCTTCAAAGTGGAAAAACCAGGATGGTGGTTCGTCTCTTAGATGCTGATAGAAGCCTTGTTCGTGTGCCAGGGAGGGAGGGTGTGACACCTTTGCACTATGTAGCCAGGGAAGGAAATATCGAACTCTTAGATGTGTTTCTATCGGCCTGCCCAAAATCTTTGGAGGATGTGACAATTCGAAACGAGACCTCTCTGCATATTGCGCTGAAAAATGACAAGGTCGAAGCATTTGAATTTGTGTTGAGATGGCTAAAAGAGGTCTGTTATGAAGAGGTCCATCAAATGGAGAAAAAGGTATTGAACTGGAAGGATGAGGATGGCAACACTTTGTTGCACATTGCAGCACTTAGAAATCAACCTGAGGCAGTTATGCTTTTATTGACCTCACAAGTTGATGTAAACTTCAAGAATTTGGCGGGTTGGACTCCCCTGGACATCATACAGCATCAACAGCCACTGAATGACAGACGAATAAGGACTATGCTATGTGGTGCTGGAGCTCTTGAAGGATCTTCACTTCTGTCTGTTCCAACCTTCACGTATTACAAAAGCACGGATCAAAGGTTGAAGCAGGCTGCGCAAGGGGGGAATATTGGTGGCCTGTATGCACTGTTACAGGAGGACTCATATATATTGGAGCGCATCAACCTTGTTCCATTTGTTGATACTCCTTTGCACATTGCTGCATCTTCAGGGCATACCGATTTTGCCATGGAGATGATGAGATTGAAGCCAGAATTTGCAAGGAAGCAAAACCCGGAAGGCTTCAGCGCAATGCACCTTGCTTTGAAGCAAGGAAAAACACAAACATTGCTTTTTCTCCTATCCGTCTATAGGGACCTTGTCCGAGTCAAAGGAAGGGAGGGAAAGACACTCTTGCATTATGCAGCCGAAATTGGAAACTTTGATCTTTTGGCTGAGTTTTTAGCAGCTTCCCCAGAGTCTATCATAGATCTGACAATTCGAAAAGAAACTGCACTTCATGTTGCTGCAAAGAATGACAAGTTGGAAGCACTTGAAGTCTTGATGGGATGGCTTCACCATGTTGATATGGATATGATCTTGCAGTGGACTGATGATGAAGGCAACACTGTACTGCACATTGCAATATTAAGAAATCAATTCCAGGTGGTGAGGTTGTTAATAAAAAGGGTTGATATAAATGCCAAAAATTTGGAGGGTTTAACAGCAATGGACATATCAGATCACCAAGGAATGCATAACAATAATACAGAAATAAGAAGTTTATTACTCCAAAGAGGAGCTTTGAGAGCTTCTTCACTCCCTAAACTTACTACTCTTGCAAATTTTCTAAGAACAGAGATGTCATTGCTCGAAAGATGGGTTATGTGTAGTTACCTCACTAAAAGTTGCATGTCAAATGAGAATCGCAATAATCTTCTAGTGGTAGCTGTCCTGATTGCAACAGCCACATTCCAAGCCGTGCTCAGCCCACCAGCCGGTATGCAGAGGGATTACTCCAGCACTCCATTTTGTCGTAAAACCAGCAGCGTCGACGCATCCAATAGTACTGGTGAACCCAATGTACCATCAAACACTGCCTCTCACTCCATGGTAGCATGGAGTTCTTTCCTGGCTCTGAACACCATAGCTTTCTTGACATCAATATCTGAGATATGGTTTCACCTCCCACGTGGCCTTTATTTTTTGACGAAATTGGGTTTACCACTTTTAGTCTGCTATATGATTTCATTGAGTCTCACGACACCAGTGCTAAGCGTGACGCCTTTTTACTTCGTTCTAATTATTTTATCTCAATTGAAACGCATAGTCAGGAACTTGTTTTTTAAGAGGTCATTGGACATAAAGCTATCCCTGTTGAAGTATTGTCCCGACTTACATAGAGAAATTAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

704

Amino Acids

79.34

Weight (kDa)

7.35

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 7 - 92 1.2e-07 Ankyrin repeats (3 copies)
Ank_5 PF13857 178 - 224 8.6e-07 Ankyrin repeats (many copies)
Ank_2 PF12796 268 - 354 2.8e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 365 - 421 9.4e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 371 - 469 7.2e-14 Ankyrin repeats (3 copies)
Ank_4 PF13637 405 - 460 5.8e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 428 - 478 4.3e-10 Ankyrin repeats (many copies)
Ank PF00023 440 - 469 6.1e-06 Ankyrin repeat
PGG PF13962 539 - 632 3.5e-11 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 813
AccB7I CCANNNNNTGG 1 cut(s) 517
AccI GTMKAC 1 cut(s) 1749
AciI CCGC 1 cut(s) 650
AclWI GGATC 2 cut(s) 751, 798
AcsI RAATTY 5 cut(s) 467, 643, 971, 1405, 1540
AcuI CTGAAG 2 cut(s) 909, 985
AcvI CACGTG 1 cut(s) 1889
AcyI GRCGYC 1 cut(s) 1979
AfaI GTAC 4 cut(s) 53, 1329, 1765, 1782
AfiI CCNNNNNNNGG 3 cut(s) 517, 1068, 1694
AjnI CCWGG 6 cut(s) 251, 301, 338, 663, 1359, 1827
AjuI GAANNNNNNNTTGG 2 cut(s) 1223, 1255
AluBI AGCT 8 cut(s) 131, 734, 1166, 1499, 1508, 1646, 1847, 2065
AluI AGCT 8 cut(s) 131, 734, 1166, 1499, 1508, 1646, 1847, 2065
Alw21I GWGCWC 2 cut(s) 736, 1683
Alw26I GTCTC 3 cut(s) 272, 413, 1958
AlwI GGATC 2 cut(s) 751, 798
AlwNI CAGNNNCTG 1 cut(s) 691
AoxI GGCC 4 cut(s) 231, 378, 832, 1891
ApeKI GCWGC 8 cut(s) 131, 575, 809, 917, 1121, 1163, 1223, 1743
ApoI RAATTY 5 cut(s) 467, 643, 971, 1405, 1540
AspLEI GCGC 4 cut(s) 439, 814, 876, 1007
AspS9I GGNCC 4 cut(s) 4, 232, 508, 1072
AsuC2I CCSGG 1 cut(s) 992
AsuHPI GGTGA 6 cut(s) 86, 1265, 1378, 1433, 1781, 1871
AsuII TTCGAA 2 cut(s) 412, 1198
AvaII GGWCC 3 cut(s) 4, 508, 1072
AxyI CCTNAGG 1 cut(s) 594
BanII GRGCYC 1 cut(s) 736
BarI GAAGNNNNNNTAC 2 cut(s) 132, 164
BbrPI CACGTG 1 cut(s) 1889
Bbv12I GWGCWC 2 cut(s) 736, 1683
BbvI GCAGC 8 cut(s) 118, 587, 796, 904, 1133, 1175, 1210, 1755
BceAI ACGGC 1 cut(s) 1661
BcgI CGANNNNNNTGC 2 cut(s) 1948, 1982
BciT130I CCWGG 6 cut(s) 253, 303, 340, 665, 1361, 1829
BcnI CCSGG 1 cut(s) 992
BcoDI GTCTC 3 cut(s) 272, 413, 1958
BfaI CTAG 2 cut(s) 83, 1637
BfmI CTRYAG 1 cut(s) 1066
BglII AGATCT 1 cut(s) 1186
BisI GCNGC 8 cut(s) 132, 576, 810, 918, 1122, 1164, 1224, 1744
BlpI GCTNAGC 2 cut(s) 1682, 1970
BlsI GCNGC 8 cut(s) 133, 577, 811, 919, 1123, 1165, 1225, 1745
BmcAI AGTACT 1 cut(s) 1765
Bme1390I CCNGG 7 cut(s) 253, 303, 340, 665, 992, 1361, 1829
Bme18I GGWCC 3 cut(s) 4, 508, 1072
BmgT120I GGNCC 4 cut(s) 4, 232, 508, 1072
BmiI GGNNCC 1 cut(s) 1073
BmrFI CCNGG 7 cut(s) 253, 303, 340, 665, 992, 1361, 1829
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 6 cut(s) 110, 265, 688, 885, 929, 1763
BmuI ACTGGG 1 cut(s) 105
BpmI CTGGAG 3 cut(s) 54, 750, 1699
Bpu1102I GCTNAGC 2 cut(s) 1682, 1970
Bpu14I TTCGAA 2 cut(s) 412, 1198
BpuMI CCSGG 1 cut(s) 992
BsaAI YACGTR 2 cut(s) 774, 1889
BsaHI GRCGYC 1 cut(s) 1979
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 7 cut(s) 159, 302, 339, 663, 945, 1444, 1806
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 3 cut(s) 517, 1068, 1694
Bse118I RCCGGY 1 cut(s) 1694
Bse1I ACTGG 4 cut(s) 100, 542, 1771, 1964
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 7 cut(s) 570, 912, 1014, 1043, 1335, 1431, 1562
BseBI CCWGG 6 cut(s) 253, 303, 340, 665, 1361, 1829
BseDI CCNNGG 7 cut(s) 159, 302, 339, 663, 945, 1444, 1806
BseGI GGATG 7 cut(s) 76, 261, 406, 550, 556, 1271, 1754
BseLI CCNNNNNNNGG 3 cut(s) 517, 1068, 1694
BseMI GCAATG 7 cut(s) 570, 912, 1014, 1043, 1335, 1431, 1562
BseMII CTCAG 4 cut(s) 585, 1143, 1696, 1857
BseNI ACTGG 4 cut(s) 100, 542, 1771, 1964
BseRI GAGGAG 2 cut(s) 108, 1509
BseXI GCAGC 8 cut(s) 118, 587, 796, 904, 1133, 1175, 1210, 1755
BsgI GTGCAG 2 cut(s) 1194, 1316
BshFI GGCC 4 cut(s) 233, 380, 834, 1893
BsiHKAI GWGCWC 2 cut(s) 736, 1683
BsiSI CCGG 2 cut(s) 992, 1695
BslFI GGGAC 2 cut(s) 1085, 2070
BslI CCNNNNNNNGG 3 cut(s) 517, 1068, 1694
BsmAI GTCTC 3 cut(s) 272, 413, 1958
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 2 cut(s) 1085, 2070
BsmI GAATGC 1 cut(s) 1455
BsnI GGCC 4 cut(s) 233, 380, 834, 1893
Bso31I GGTCTC 1 cut(s) 413
Bsp119I TTCGAA 2 cut(s) 412, 1198
Bsp1286I GDGCHC 2 cut(s) 736, 1683
Bsp1407I TGTACA 1 cut(s) 51
Bsp143I GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
Bsp1720I GCTNAGC 2 cut(s) 1682, 1970
Bsp19I CCATGG 3 cut(s) 159, 945, 1806
BspACI CCGC 1 cut(s) 650
BspANI GGCC 4 cut(s) 233, 380, 834, 1893
BspCNI CTCAG 4 cut(s) 586, 1144, 1695, 1858
BspLI GGNNCC 1 cut(s) 1073
BspPI GGATC 2 cut(s) 751, 798
BspT104I TTCGAA 2 cut(s) 412, 1198
BspTNI GGTCTC 1 cut(s) 413
BsrDI GCAATG 7 cut(s) 570, 912, 1014, 1043, 1335, 1431, 1562
BsrFI RCCGGY 1 cut(s) 1694
BsrGI TGTACA 1 cut(s) 51
BsrI ACTGG 4 cut(s) 100, 542, 1771, 1964
BssAI RCCGGY 1 cut(s) 1694
BssECI CCNNGG 7 cut(s) 159, 302, 339, 663, 945, 1444, 1806
BssMI GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
BssNI GRCGYC 1 cut(s) 1979
BssT1I CCWWGG 4 cut(s) 159, 945, 1444, 1806
Bst2UI CCWGG 6 cut(s) 253, 303, 340, 665, 1361, 1829
Bst4CI ACNGT 3 cut(s) 153, 846, 1327
Bst6I CTCTTC 1 cut(s) 498
BstACI GRCGYC 1 cut(s) 1979
BstAUI TGTACA 1 cut(s) 51
BstBAI YACGTR 2 cut(s) 774, 1889
BstBI TTCGAA 2 cut(s) 412, 1198
BstC8I GCNNGC 2 cut(s) 382, 807
BstDEI CTNAG 9 cut(s) 271, 361, 581, 594, 1152, 1547, 1682, 1866, 1970
BstDSI CCRYGG 3 cut(s) 159, 945, 1806
BstF5I GGATG 7 cut(s) 76, 261, 406, 550, 556, 1271, 1754
BstHHI GCGC 4 cut(s) 439, 814, 876, 1007
BstKTI GATC 7 cut(s) 88, 746, 793, 1144, 1189, 1296, 1441
BstMAI GTCTC 3 cut(s) 272, 413, 1958
BstMBI GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
BstMWI GCNNNNNNNGC 4 cut(s) 436, 685, 811, 1505
BstNI CCWGG 6 cut(s) 253, 303, 340, 665, 1361, 1829
BstNSI RCATGY 1 cut(s) 1612
BstSCI CCNGG 7 cut(s) 251, 301, 338, 663, 990, 1359, 1827
BstSFI CTRYAG 1 cut(s) 1066
BstV1I GCAGC 8 cut(s) 118, 587, 796, 904, 1133, 1175, 1210, 1755
BstX2I RGATCY 2 cut(s) 743, 1186
BstXI CCANNNNNNTGG 3 cut(s) 229, 259, 1408
BstYI RGATCY 2 cut(s) 743, 1186
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 4 cut(s) 233, 380, 834, 1893
BtgI CCRYGG 3 cut(s) 159, 945, 1806
BtsCI GGATG 7 cut(s) 76, 261, 406, 550, 556, 1271, 1754
BtsI GCAGTG 2 cut(s) 1307, 1791
BtsIMutI CAGTG 6 cut(s) 689, 842, 1307, 1323, 1791, 1971
Cac8I GCNNGC 2 cut(s) 382, 807
CaiI CAGNNNCTG 1 cut(s) 691
CfoI GCGC 4 cut(s) 439, 814, 876, 1007
Cfr10I RCCGGY 1 cut(s) 1694
Cfr13I GGNCC 4 cut(s) 4, 232, 508, 1072
CseI GACGC 3 cut(s) 1735, 1760, 1987
Csp6I GTAC 4 cut(s) 52, 1328, 1764, 1781
CviAII CATG 8 cut(s) 160, 223, 946, 1217, 1277, 1609, 1807, 1815
CviQI GTAC 4 cut(s) 52, 1328, 1764, 1781
DdeI CTNAG 9 cut(s) 271, 361, 581, 594, 1152, 1547, 1682, 1866, 1970
DpnI GATC 7 cut(s) 87, 745, 792, 1143, 1188, 1295, 1440
DpnII GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
Ecl136II GAGCTC 1 cut(s) 734
Eco130I CCWWGG 4 cut(s) 159, 945, 1444, 1806
Eco24I GRGCYC 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 3 cut(s) 4, 508, 1072
Eco53kI GAGCTC 1 cut(s) 734
Eco57I CTGAAG 2 cut(s) 909, 985
Eco72I CACGTG 1 cut(s) 1889
Eco81I CCTNAGG 1 cut(s) 594
EcoICRI GAGCTC 1 cut(s) 734
EcoO109I RGGNCCY 1 cut(s) 1072
EcoRII CCWGG 6 cut(s) 251, 301, 338, 663, 1359, 1827
EcoT14I CCWWGG 4 cut(s) 159, 945, 1444, 1806
EcoT22I ATGCAT 1 cut(s) 1455
EcoT38I GRGCYC 1 cut(s) 736
ErhI CCWWGG 4 cut(s) 159, 945, 1444, 1806
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 8 cut(s) 163, 226, 949, 1220, 1280, 1612, 1810, 1818
FalI AAGNNNNNCTT 4 cut(s) 1094, 1126, 1483, 1515
FaqI GGGAC 2 cut(s) 1085, 2070
FatI CATG 8 cut(s) 159, 222, 945, 1216, 1276, 1608, 1806, 1814
FauI CCCGC 1 cut(s) 643
FblI GTMKAC 1 cut(s) 1749
Fnu4HI GCNGC 8 cut(s) 132, 576, 810, 918, 1122, 1164, 1224, 1744
FokI GGATG 7 cut(s) 83, 268, 413, 557, 563, 1278, 1741
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 8 cut(s) 132, 576, 810, 918, 1122, 1164, 1224, 1744
FspBI CTAG 2 cut(s) 83, 1637
FspI TGCGCA 1 cut(s) 813
GlaI GCGC 4 cut(s) 438, 813, 875, 1006
GluI GCNGC 8 cut(s) 132, 576, 810, 918, 1122, 1164, 1224, 1744
GsuI CTGGAG 3 cut(s) 54, 750, 1699
HaeIII GGCC 4 cut(s) 233, 380, 834, 1893
HapII CCGG 2 cut(s) 992, 1695
HgaI GACGC 3 cut(s) 1735, 1760, 1987
HhaI GCGC 4 cut(s) 439, 814, 876, 1007
Hin1I GRCGYC 1 cut(s) 1979
Hin1II CATG 8 cut(s) 163, 226, 949, 1220, 1280, 1612, 1810, 1818
Hin6I GCGC 4 cut(s) 437, 812, 874, 1005
HinP1I GCGC 4 cut(s) 437, 812, 874, 1005
HincII GTYRAC 1 cut(s) 1750
HindII GTYRAC 1 cut(s) 1750
HinfI GANTC 6 cut(s) 658, 857, 1083, 1175, 1621, 1951
HpaII CCGG 2 cut(s) 992, 1695
HphI GGTGA 6 cut(s) 86, 1265, 1378, 1433, 1781, 1871
Hpy166II GTNNAC 6 cut(s) 77, 634, 1305, 1750, 1772, 1919
Hpy188I TCNGA 6 cut(s) 139, 1082, 1191, 1438, 1836, 1867
Hpy8I GTNNAC 6 cut(s) 77, 634, 1305, 1750, 1772, 1919
Hpy99I CGWCG 2 cut(s) 1751, 1754
HpyCH4III ACNGT 3 cut(s) 153, 846, 1327
HpyCH4IV ACGT 2 cut(s) 773, 1888
HpyF10VI GCNNNNNNNGC 4 cut(s) 436, 685, 811, 1505
HpyF3I CTNAG 9 cut(s) 271, 361, 581, 594, 1152, 1547, 1682, 1866, 1970
HpySE526I ACGT 2 cut(s) 773, 1888
Hsp92I GRCGYC 1 cut(s) 1979
Hsp92II CATG 8 cut(s) 163, 226, 949, 1220, 1280, 1612, 1810, 1818
HspAI GCGC 4 cut(s) 437, 812, 874, 1005
Kzo9I GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
LmnI GCTCC 3 cut(s) 731, 871, 1496
Lsp1109I GCAGC 8 cut(s) 118, 587, 796, 904, 1133, 1175, 1210, 1755
LweI GCATC 6 cut(s) 110, 265, 688, 885, 929, 1763
MaeI CTAG 2 cut(s) 83, 1637
MaeII ACGT 2 cut(s) 773, 1888
MaeIII GTNAC 5 cut(s) 316, 403, 846, 1589, 1975
MalI GATC 7 cut(s) 87, 745, 792, 1143, 1188, 1295, 1440
MboI GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
MboII GAAGA 6 cut(s) 28, 515, 738, 915, 1503, 1625
MfeI CAATTG 1 cut(s) 2012
MflI RGATCY 2 cut(s) 743, 1186
MhlI GDGCHC 2 cut(s) 736, 1683
MlyI GAGTC 5 cut(s) 652, 851, 1092, 1184, 1960
MmeI TCCRAC 3 cut(s) 635, 788, 1221
Mph1103I ATGCAT 1 cut(s) 1455
MseI TTAA 6 cut(s) 216, 1346, 1376, 1418, 2043, 2106
MslI CAYNNNNRTG 1 cut(s) 950
MspI CCGG 2 cut(s) 992, 1695
MspR9I CCNGG 7 cut(s) 253, 303, 340, 665, 992, 1361, 1829
MunI CAATTG 1 cut(s) 2012
Mva1269I GAATGC 1 cut(s) 1455
MvaI CCWGG 6 cut(s) 253, 303, 340, 665, 1361, 1829
MwoI GCNNNNNNNGC 4 cut(s) 436, 685, 811, 1505
NciI CCSGG 1 cut(s) 992
NcoI CCATGG 3 cut(s) 159, 945, 1806
NdeII GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
NlaIII CATG 8 cut(s) 163, 226, 949, 1220, 1280, 1612, 1810, 1818
NlaIV GGNNCC 1 cut(s) 1073
NmuCI GTSAC 3 cut(s) 316, 403, 1975
NsbI TGCGCA 1 cut(s) 813
NsiI ATGCAT 1 cut(s) 1455
NspI RCATGY 1 cut(s) 1612
NspV TTCGAA 2 cut(s) 412, 1198
PctI GAATGC 1 cut(s) 1455
PfeI GAWTC 1 cut(s) 1621
PflFI GACNNNGTC 2 cut(s) 452, 1076
PflMI CCANNNNNTGG 1 cut(s) 517
PkrI GCNGC 8 cut(s) 133, 577, 811, 919, 1123, 1165, 1225, 1745
PleI GAGTC 5 cut(s) 652, 851, 1091, 1183, 1959
PmaCI CACGTG 1 cut(s) 1889
PmlI CACGTG 1 cut(s) 1889
PpsI GAGTC 5 cut(s) 652, 851, 1091, 1183, 1959
Ppu21I YACGTR 2 cut(s) 774, 1889
PpuMI RGGWCCY 1 cut(s) 1072
Psp124BI GAGCTC 1 cut(s) 736
Psp5II RGGWCCY 1 cut(s) 1072
Psp6I CCWGG 6 cut(s) 251, 301, 338, 663, 1359, 1827
PspCI CACGTG 1 cut(s) 1889
PspGI CCWGG 6 cut(s) 251, 301, 338, 663, 1359, 1827
PspN4I GGNNCC 1 cut(s) 1073
PspPI GGNCC 4 cut(s) 4, 232, 508, 1072
PspPPI RGGWCCY 1 cut(s) 1072
PsrI GAACNNNNNNTAC 2 cut(s) 1764, 1796
PstNI CAGNNNCTG 1 cut(s) 691
PsuI RGATCY 2 cut(s) 743, 1186
PsyI GACNNNGTC 2 cut(s) 452, 1076
RsaI GTAC 4 cut(s) 53, 1329, 1765, 1782
RsaNI GTAC 4 cut(s) 52, 1328, 1764, 1781
RseI CAYNNNNRTG 1 cut(s) 950
SacI GAGCTC 1 cut(s) 736
SalI GTCGAC 1 cut(s) 1748
SaqAI TTAA 6 cut(s) 216, 1346, 1376, 1418, 2043, 2106
SatI GCNGC 8 cut(s) 132, 576, 810, 918, 1122, 1164, 1224, 1744
Sau3AI GATC 7 cut(s) 85, 743, 790, 1141, 1186, 1293, 1438
Sau96I GGNCC 4 cut(s) 4, 232, 508, 1072
ScaI AGTACT 1 cut(s) 1765
SchI GAGTC 5 cut(s) 652, 851, 1092, 1184, 1960
ScrFI CCNGG 7 cut(s) 253, 303, 340, 665, 992, 1361, 1829
SduI GDGCHC 2 cut(s) 736, 1683
SfaNI GCATC 6 cut(s) 110, 265, 688, 885, 929, 1763
SfcI CTRYAG 1 cut(s) 1066
SfuI TTCGAA 2 cut(s) 412, 1198
SgrDI CGTCGACG 1 cut(s) 1748
SinI GGWCC 3 cut(s) 4, 508, 1072
SmiMI CAYNNNNRTG 1 cut(s) 950
SsiI CCGC 1 cut(s) 650
SspI AATATT 2 cut(s) 826, 1344
SspMI CTAG 2 cut(s) 83, 1637
SstI GAGCTC 1 cut(s) 736
StyD4I CCNGG 7 cut(s) 251, 301, 338, 663, 990, 1359, 1827
StyI CCWWGG 4 cut(s) 159, 945, 1444, 1806
TaaI ACNGT 3 cut(s) 153, 846, 1327
TaiI ACGT 2 cut(s) 776, 1891
TaqI TCGA 7 cut(s) 111, 354, 412, 456, 1198, 1569, 1749
TatI WGTACW 3 cut(s) 51, 1327, 1763
TfiI GAWTC 1 cut(s) 1621
Tru1I TTAA 6 cut(s) 216, 1346, 1376, 1418, 2043, 2106
Tru9I TTAA 6 cut(s) 216, 1346, 1376, 1418, 2043, 2106
TscAI CASTG 6 cut(s) 696, 849, 1307, 1330, 1798, 1971
TseFI GTSAC 3 cut(s) 316, 403, 1975
TseI GCWGC 8 cut(s) 131, 575, 809, 917, 1121, 1163, 1223, 1743
Tsp45I GTSAC 3 cut(s) 316, 403, 1975
TspDTI ATGAA 4 cut(s) 516, 1205, 1329, 1935
TspGWI ACGGA 2 cut(s) 803, 1051
TspRI CASTG 6 cut(s) 696, 849, 1307, 1330, 1798, 1971
Tth111I GACNNNGTC 2 cut(s) 452, 1076
Van91I CCANNNNNTGG 1 cut(s) 517
VpaK11BI GGWCC 3 cut(s) 4, 508, 1072
XapI RAATTY 5 cut(s) 467, 643, 971, 1405, 1540
XbaI TCTAGA 1 cut(s) 82
XceI RCATGY 1 cut(s) 1612
XmiI GTMKAC 1 cut(s) 1749
XspI CTAG 2 cut(s) 83, 1637
ZrmI AGTACT 1 cut(s) 1765
Zsp2I ATGCAT 1 cut(s) 1455
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.