Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003301

Physical Location & Seq

Genomic Coordinates Reverse (-)

49050803 .. 49055781

Gene Structure 4979 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0376900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2043 bp

ATGGGATTTTTCGGGAATGGCGATTGGTTGAGGATCCCATTGATCATCAAAATCTGGGGGTTTATCATGATCTCCGTCACCTTCTTCTACTTGGGCAAGAACTGGACCGGTGGGGCCCAGCAGCTCCTCTCCTTCACCACCGCCGCCGCCACGCGCCGATCTCCTCCTTCCGCCACGGTCTCCATTTCCCCCAATCTCAACAAGCCCTTCAACCTCTCCGCCCTCCTCAACGAAACCCTAGCCCCGCCGCCGCTGCCTTCTCCTCCTCCTCCTCCGCCGCCGACTCCCTCTCCTCCGCCCCCCGCGCCGCCGCCGTCGGACGTGATCCAGCGGTTCGGGATCGTGGACGAGAACGGGACCATGGCCGACGATTTCGAGGTCGGCGAGTTCGATCCCGATGAGGTGGTGGAGAATTGGGGCGGCCAGAATGGGACGGCGGCGGCGGAGAGTGGCGGGAGCGGGTCGGGTAGGTTCAGTGTGAAAAGGTTTGAGCTTTGTCGTAACGGTATGAGCGAGTACATACCGTGTTTGGATAATGTGGTGGCCGTTAGGAGGCTCAAATCCACCGATAAAGGCGAGCGCTTTGAGCGGCATTGTCCGGATTCCGGCAAGGGTTTGAATTGCTTGGTTCCGCCGCCCAAGAATTACAAGAGCCCCATTCCATGGCCGAAGAGCCGCGATGAGGTTTGGTTCTACAATGTACCTCATACTCGTCTGGTTGAGGATAAAGGGGGTCAGAACTGGATTACACGAGAAAAGAATAAGTTTAAGTTTCCGGGAGGTGGGACACAGTTTATACATGGGGCAAATGAGTACTTGGATCATATTTCTAAGATGATCCCTGACATCACATTTGGTCACCATATTCGAGTTGCATTGGATGTTGGATGTGGTGTTGCAAGTTTTGGTGCATACCTGCTGCAACGGAATGTCATCACTATGTCAATTGCTCCGAAAGATGTCCATGAGAATCAGATACAATTTGCTCTTGAGCGTGGAGTGCCTGCAATGGTAGCAGCATTTGCTACTCGCCGCTTATTGTACCCAAGTCAGGCATTTGACTTGATCCATTGCTCACGATGCAGGATTAATTGGACTCGTGACGATGGGATATTGCTACTTGAGGTTAATAGGATGCTCCGGGCAGGAGGATACTTTGTTTGGGCAGCACAGCCAGTTTATAAGCATGAAGAAGTCCTAGAGGAGCAGTGGCAAGAGATGCTTAACCTCACGACCCGTCTTTGCTGGGAGTTTGTGAAAAAGGATGGGTATGTTGCCGTATGGCAGAAGCCAGTTAACAACAGCTGCTATCTAGGTCGGGATGCTGAAACCAAACCTCCATTATGCGACTCAAGTGATGACCCGGACAAAGTTTGGTATGTTGATCTGAAGGCATGCATAACAAGACTCCCTGAAAATGGTTATGGAGCAAATGTCACAACATGGCCAGACCGCATGCAAACTCCCCCTGATAGGCTTCAGAGCATACAGTTTGATGCCTATATATCCAGAAAGGAGCTCTTCAAGGCAGAATCTAAATATTGGCATGAAATAATTGAAGGCTATGTCCGTGCTTTTAAATGGAAGAAGTTAAGATTAAGAAATGTAATGGATATGAGAGCTGGCTTTGGAGGATTTGCAGTGGCACTAATGGAACATAACTTAAATTCCTGGGTTATGAATGTGGTTCCTGTTAGCGGCCCCAACACCTTGCCTGTTATATATGACCGTGGATTTATTGGAGTTATGCATGACTGGTGTGAGCCATTTGATACATACCCAAGAACCTATGATTTATTACATGCAGCTGGCCTCTTCTCTATTGAGAAGAAAAGGTGCAATATGTCAACAATCATGCTTGAGATGGACCGTATGCTAAGACCAGGTGGACGTGTATACATCCGTGATGCTCTTGCGGTCATGGATGAGCTTCAAGCGATTGGAAATGCCATGGGCTGGAAAGTTAATTTGCGAGACACATCTGAGGGTCCTCATGCAAGTTATAGGCTCTTCATGGCTGAAAAACGCCTCTTGCATAGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_3 Ank_4 PGG

Protein Analysis

680

Amino Acids

76.86

Weight (kDa)

7.88

Isoelectric Point (pI)

43.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Methyltransf_29	PF03141	172 - 675	3e-231	Putative S-adenosyl-L-methionine-dependent methyltransferase
Methyltransf_11	PF08241	293 - 387	7.6e-07	Methyltransferase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003301)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G14480 AT1G14480 AT1G14500 AT4G10720 AT4G10720 AT5G15500 AT5G15500 AT5G54610 AT5G54620
fragaria_vesca	FvH4_7g26700
malus_domestica	MD04G1235200.v1.1
prunus_persica	Prupe.5G057700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0373291 RchiOBHm_Chr7g0205421
rosa_laevigata	RLG00000003382 RLG00000026829
rosa_multiflora	Rmu_sc0000170.1_g000001 Rmu_sc0006687.1_g000001 Rmu_sc0021015.1_g000001
rosa_roxburghii	Rroxscaffold_3G00252390 Rroxscaffold_4G00284290
rosa_rugosa	Rorug01G0376900 Rorug07G0091300
rosa_samantha	Rh1AG385800 Rh1AG386000 Rh1BG350000 Rh1DG380800 Rh1DG381000 Rh7AG221300 Rh7BG217400 Rh7CG234200 Rh7CG234300 Rh7DG228100
rosa_wichuraiana	Rw1G034910 Rw7G019110 Rw7G019120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1182
Acc36I	ACCTGC	1 cut(s)	924
AccB7I	CCANNNNNTGG	2 cut(s)	663, 1956
AccBSI	CCGCTC	2 cut(s)	459, 589
AccI	GTMKAC	1 cut(s)	1896
AccII	CGCG	3 cut(s)	154, 305, 678
AccIII	TCCGGA	1 cut(s)	598
AclWI	GGATC	8 cut(s)	28, 41, 319, 347, 386, 828, 832, 1060
AcoI	YGGCCR	5 cut(s)	363, 421, 543, 665, 1445
AcsI	RAATTY	1 cut(s)	1666
AcuI	CTGAAG	2 cut(s)	1409, 1463
AfaI	GTAC	4 cut(s)	518, 702, 815, 1043
AfeI	AGCGCT	1 cut(s)	581
AflIII	ACRYGT	1 cut(s)	1891
AgeI	ACCGGT	1 cut(s)	107
AgsI	TTSAA	5 cut(s)	211, 619, 1525, 1559, 1934
AjiI	CACGTC	2 cut(s)	322, 1892
AjnI	CCWGG	2 cut(s)	1670, 1882
AluBI	AGCT	7 cut(s)	124, 493, 1305, 1519, 1622, 1808, 1930
AluI	AGCT	7 cut(s)	124, 493, 1305, 1519, 1622, 1808, 1930
Alw21I	GWGCWC	1 cut(s)	1521
Alw26I	GTCTC	2 cut(s)	184, 1968
AlwI	GGATC	8 cut(s)	28, 41, 319, 347, 386, 828, 832, 1060
Aor13HI	TCCGGA	1 cut(s)	598
Aor51HI	AGCGCT	1 cut(s)	581
AoxI	GGCC	8 cut(s)	114, 363, 421, 543, 665, 1445, 1699, 1810
ApaI	GGGCCC	1 cut(s)	118
ApeKI	GCWGC	7 cut(s)	121, 253, 919, 1016, 1166, 1305, 1805
ApoI	RAATTY	1 cut(s)	1666
ArsI	GACNNNNNNTTYG	2 cut(s)	836, 868
AseI	ATTAAT	1 cut(s)	1089
AsiGI	ACCGGT	1 cut(s)	107
AspLEI	GCGC	3 cut(s)	156, 307, 582
AspS9I	GGNCC	7 cut(s)	105, 114, 115, 357, 1700, 1867, 1988
AsuC2I	CCSGG	3 cut(s)	777, 1142, 1364
AsuHPI	GGTGA	3 cut(s)	70, 127, 851
AvaII	GGWCC	4 cut(s)	105, 357, 1867, 1988
BaeGI	GKGCMC	1 cut(s)	118
BalI	TGGCCA	1 cut(s)	1447
BamHI	GGATCC	1 cut(s)	33
BanII	GRGCYC	3 cut(s)	118, 656, 1521
BauI	CACGAG	2 cut(s)	750, 1098
Bbv12I	GWGCWC	1 cut(s)	1521
BbvI	GCAGC	7 cut(s)	133, 240, 906, 1028, 1178, 1292, 1817
BccI	CCATC	3 cut(s)	1100, 1259, 1858
BceAI	ACGGC	4 cut(s)	298, 450, 530, 1262
BciT130I	CCWGG	2 cut(s)	1672, 1884
BciVI	GTATCC	1 cut(s)	1145
BclI	TGATCA	1 cut(s)	42
BcnI	CCSGG	3 cut(s)	777, 1142, 1364
BcoDI	GTCTC	2 cut(s)	184, 1968
BfaI	CTAG	3 cut(s)	239, 1199, 1313
BfoI	RGCGCY	1 cut(s)	583
BfuAI	ACCTGC	1 cut(s)	924
BfuI	GTATCC	1 cut(s)	1145
BmcAI	AGTACT	1 cut(s)	815
Bme1390I	CCNGG	5 cut(s)	777, 1142, 1364, 1672, 1884
Bme18I	GGWCC	4 cut(s)	105, 357, 1867, 1988
BmgBI	CACGTC	2 cut(s)	322, 1892
BmgT120I	GGNCC	7 cut(s)	105, 114, 115, 357, 1700, 1867, 1988
BmiI	GGNNCC	8 cut(s)	35, 115, 116, 358, 630, 1689, 1702, 1989
BmrFI	CCNGG	5 cut(s)	777, 1142, 1364, 1672, 1884
BmsI	GCATC	6 cut(s)	1070, 1125, 1209, 1312, 1486, 1897
BpuEI	CTTGAG	4 cut(s)	1010, 1142, 1336, 1880
BpuMI	CCSGG	3 cut(s)	777, 1142, 1364
BsaI	GGTCTC	1 cut(s)	184
BsaJI	CCNNGG	6 cut(s)	174, 360, 662, 1671, 1729, 1950
BsaWI	WCCGGW	2 cut(s)	107, 598
BsaXI	ACNNNNNCTCC	6 cut(s)	274, 304, 1321, 1351, 1419, 1449
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	5 cut(s)	107, 746, 1175, 1292, 1760
Bse3DI	GCAATG	2 cut(s)	1014, 1069
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	2 cut(s)	1672, 1884
BseDI	CCNNGG	6 cut(s)	174, 360, 662, 1671, 1729, 1950
BseGI	GGATG	7 cut(s)	886, 893, 1140, 1270, 1327, 1899, 1930
BseMI	GCAATG	2 cut(s)	1014, 1069
BseMII	CTCAG	1 cut(s)	1974
BseNI	ACTGG	5 cut(s)	107, 746, 1175, 1292, 1760
BseRI	GAGGAG	9 cut(s)	116, 153, 215, 252, 255, 258, 261, 282, 1217
BseSI	GKGCMC	1 cut(s)	118
BseXI	GCAGC	7 cut(s)	133, 240, 906, 1028, 1178, 1292, 1817
BseYI	CCCAGC	2 cut(s)	117, 1245
Bsh1236I	CGCG	3 cut(s)	154, 305, 678
BshFI	GGCC	8 cut(s)	116, 365, 423, 545, 667, 1447, 1701, 1812
BshTI	ACCGGT	1 cut(s)	107
BsiHKAI	GWGCWC	1 cut(s)	1521
BsiSI	CCGG	6 cut(s)	108, 599, 606, 776, 1141, 1364
BslFI	GGGAC	3 cut(s)	370, 445, 799
BsmAI	GTCTC	2 cut(s)	184, 1968
BsmFI	GGGAC	3 cut(s)	370, 445, 799
BsnI	GGCC	8 cut(s)	116, 365, 423, 545, 667, 1447, 1701, 1812
Bso31I	GGTCTC	1 cut(s)	184
Bsp120I	GGGCCC	1 cut(s)	114
Bsp1286I	GDGCHC	3 cut(s)	118, 656, 1521
Bsp13I	TCCGGA	1 cut(s)	598
Bsp19I	CCATGG	3 cut(s)	360, 662, 1950
BspANI	GGCC	8 cut(s)	116, 365, 423, 545, 667, 1447, 1701, 1812
BspCNI	CTCAG	1 cut(s)	1975
BspEI	TCCGGA	1 cut(s)	598
BspFNI	CGCG	3 cut(s)	154, 305, 678
BspHI	TCATGA	1 cut(s)	66
BspLI	GGNNCC	8 cut(s)	35, 115, 116, 358, 630, 1689, 1702, 1989
BspMI	ACCTGC	1 cut(s)	924
BspPI	GGATC	8 cut(s)	28, 41, 319, 347, 386, 828, 832, 1060
BspQI	GCTCTTC	3 cut(s)	665, 1526, 2015
BspTNI	GGTCTC	1 cut(s)	184
BsrBI	CCGCTC	2 cut(s)	459, 589
BsrDI	GCAATG	2 cut(s)	1014, 1069
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	5 cut(s)	107, 746, 1175, 1292, 1760
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	6 cut(s)	174, 360, 662, 1671, 1729, 1950
BssNAI	GTATAC	1 cut(s)	1897
BssSI	CACGAG	2 cut(s)	750, 1098
BssT1I	CCWWGG	3 cut(s)	360, 662, 1950
Bst1107I	GTATAC	1 cut(s)	1897
Bst2BI	CACGAG	2 cut(s)	750, 1098
Bst2UI	CCWGG	2 cut(s)	1672, 1884
Bst4CI	ACNGT	7 cut(s)	178, 506, 525, 792, 1491, 1730, 1871
Bst6I	CTCTTC	4 cut(s)	665, 1526, 1820, 2015
BstAPI	GCANNNNNTGC	2 cut(s)	1022, 1219
BstC8I	GCNNGC	6 cut(s)	578, 1005, 1396, 1457, 1624, 1810
BstDEI	CTNAG	3 cut(s)	831, 1877, 1983
BstDSI	CCRYGG	5 cut(s)	174, 360, 662, 1729, 1950
BstEII	GGTNACC	1 cut(s)	857
BstF5I	GGATG	7 cut(s)	886, 893, 1140, 1270, 1327, 1899, 1930
BstFNI	CGCG	3 cut(s)	154, 305, 678
BstH2I	RGCGCY	1 cut(s)	583
BstHHI	GCGC	3 cut(s)	156, 307, 582
BstMAI	GTCTC	2 cut(s)	184, 1968
BstMWI	GCNNNNNNNGC	8 cut(s)	253, 304, 586, 1000, 1013, 1022, 1080, 1219
BstNI	CCWGG	2 cut(s)	1672, 1884
BstNSI	RCATGY	3 cut(s)	1398, 1459, 1805
BstPI	GGTNACC	1 cut(s)	857
BstSCI	CCNGG	5 cut(s)	775, 1140, 1362, 1670, 1882
BstSLI	GKGCMC	1 cut(s)	118
BstUI	CGCG	3 cut(s)	154, 305, 678
BstV1I	GCAGC	7 cut(s)	133, 240, 906, 1028, 1178, 1292, 1817
BstX2I	RGATCY	1 cut(s)	33
BstYI	RGATCY	1 cut(s)	33
BstZ17I	GTATAC	1 cut(s)	1897
BsuI	GTATCC	1 cut(s)	1145
BsuRI	GGCC	8 cut(s)	116, 365, 423, 545, 667, 1447, 1701, 1812
BtgI	CCRYGG	5 cut(s)	174, 360, 662, 1729, 1950
BtgZI	GCGATG	1 cut(s)	693
BtrI	CACGTC	2 cut(s)	322, 1892
BtsCI	GGATG	7 cut(s)	886, 893, 1140, 1270, 1327, 1899, 1930
BtsI	GCAGTG	2 cut(s)	1214, 1647
BtsIMutI	CAGTG	3 cut(s)	481, 1214, 1647
BveI	ACCTGC	1 cut(s)	924
Cac8I	GCNNGC	6 cut(s)	578, 1005, 1396, 1457, 1624, 1810
CciI	TCATGA	1 cut(s)	66
CfoI	GCGC	3 cut(s)	156, 307, 582
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	7 cut(s)	105, 114, 115, 357, 1700, 1867, 1988
CsiI	ACCWGGT	1 cut(s)	1882
Csp6I	GTAC	4 cut(s)	517, 701, 814, 1042
CspAI	ACCGGT	1 cut(s)	107
CviQI	GTAC	4 cut(s)	517, 701, 814, 1042
DdeI	CTNAG	3 cut(s)	831, 1877, 1983
DraI	TTTAAA	1 cut(s)	1579
EaeI	YGGCCR	5 cut(s)	363, 421, 543, 665, 1445
Eam1104I	CTCTTC	4 cut(s)	665, 1526, 1820, 2015
EarI	CTCTTC	4 cut(s)	665, 1526, 1820, 2015
EciI	GGCGGA	6 cut(s)	160, 208, 264, 285, 458, 621
Ecl136II	GAGCTC	1 cut(s)	1519
Eco130I	CCWWGG	3 cut(s)	360, 662, 1950
Eco24I	GRGCYC	3 cut(s)	118, 656, 1521
Eco31I	GGTCTC	1 cut(s)	184
Eco47I	GGWCC	4 cut(s)	105, 357, 1867, 1988
Eco47III	AGCGCT	1 cut(s)	581
Eco53kI	GAGCTC	1 cut(s)	1519
Eco57I	CTGAAG	2 cut(s)	1409, 1463
Eco91I	GGTNACC	1 cut(s)	857
EcoICRI	GAGCTC	1 cut(s)	1519
EcoO109I	RGGNCCY	2 cut(s)	114, 1988
EcoO65I	GGTNACC	1 cut(s)	857
EcoRII	CCWGG	2 cut(s)	1670, 1882
EcoT14I	CCWWGG	3 cut(s)	360, 662, 1950
EcoT22I	ATGCAT	2 cut(s)	1400, 1752
EcoT38I	GRGCYC	3 cut(s)	118, 656, 1521
ErhI	CCWWGG	3 cut(s)	360, 662, 1950
FalI	AAGNNNNNCTT	4 cut(s)	1206, 1238, 1505, 1537
FaqI	GGGAC	3 cut(s)	370, 445, 799
FauI	CCCGC	4 cut(s)	252, 310, 446, 452
FbaI	TGATCA	1 cut(s)	42
FblI	GTMKAC	1 cut(s)	1896
FokI	GGATG	7 cut(s)	893, 900, 1147, 1277, 1334, 1886, 1937
FriOI	GRGCYC	3 cut(s)	118, 656, 1521
FspBI	CTAG	3 cut(s)	239, 1199, 1313
GlaI	GCGC	3 cut(s)	155, 306, 581
GsaI	CCCAGC	2 cut(s)	121, 1249
HaeII	RGCGCY	1 cut(s)	583
HaeIII	GGCC	8 cut(s)	116, 365, 423, 545, 667, 1447, 1701, 1812
HapII	CCGG	6 cut(s)	108, 599, 606, 776, 1141, 1364
HhaI	GCGC	3 cut(s)	156, 307, 582
Hin6I	GCGC	3 cut(s)	154, 305, 580
HinP1I	GCGC	3 cut(s)	154, 305, 580
HincII	GTYRAC	2 cut(s)	1297, 1848
HindII	GTYRAC	2 cut(s)	1297, 1848
HinfI	GANTC	7 cut(s)	283, 602, 970, 1096, 1349, 1407, 1532
HpaI	GTTAAC	1 cut(s)	1297
HpaII	CCGG	6 cut(s)	108, 599, 606, 776, 1141, 1364
HphI	GGTGA	3 cut(s)	70, 127, 851
Hpy166II	GTNNAC	5 cut(s)	346, 1297, 1848, 1889, 1897
Hpy188I	TCNGA	7 cut(s)	319, 738, 954, 975, 1389, 1482, 1984
Hpy8I	GTNNAC	5 cut(s)	346, 1297, 1848, 1889, 1897
Hpy99I	CGWCG	2 cut(s)	319, 371
HpyAV	CCTTC	7 cut(s)	91, 142, 177, 217, 267, 1384, 1553
HpyCH4III	ACNGT	7 cut(s)	178, 506, 525, 792, 1491, 1730, 1871
HpyCH4IV	ACGT	2 cut(s)	321, 1891
HpyF10VI	GCNNNNNNNGC	8 cut(s)	253, 304, 586, 1000, 1013, 1022, 1080, 1219
HpyF3I	CTNAG	3 cut(s)	831, 1877, 1983
HpySE526I	ACGT	2 cut(s)	321, 1891
HspAI	GCGC	3 cut(s)	154, 305, 580
Kpn2I	TCCGGA	1 cut(s)	598
Ksp22I	TGATCA	1 cut(s)	42
KspAI	GTTAAC	1 cut(s)	1297
LguI	GCTCTTC	3 cut(s)	665, 1526, 2015
LmnI	GCTCC	7 cut(s)	129, 456, 955, 1143, 1204, 1427, 1516
Lsp1109I	GCAGC	7 cut(s)	133, 240, 906, 1028, 1178, 1292, 1817
LweI	GCATC	6 cut(s)	1070, 1125, 1209, 1312, 1486, 1897
MabI	ACCWGGT	1 cut(s)	1882
MaeI	CTAG	3 cut(s)	239, 1199, 1313
MaeII	ACGT	2 cut(s)	321, 1891
MaeIII	GTNAC	5 cut(s)	76, 500, 857, 1100, 1435
MbiI	CCGCTC	2 cut(s)	459, 589
MboII	GAAGA	8 cut(s)	76, 682, 1202, 1513, 1597, 1807, 1840, 2002
MfeI	CAATTG	1 cut(s)	945
MflI	RGATCY	1 cut(s)	33
MhlI	GDGCHC	3 cut(s)	118, 656, 1521
MlsI	TGGCCA	1 cut(s)	1447
MluCI	AATT	9 cut(s)	412, 619, 643, 945, 980, 1090, 1554, 1666, 1966
MluNI	TGGCCA	1 cut(s)	1447
MlyI	GAGTC	4 cut(s)	277, 1090, 1343, 1401
MmeI	TCCRAC	2 cut(s)	297, 865
Mox20I	TGGCCA	1 cut(s)	1447
Mph1103I	ATGCAT	2 cut(s)	1400, 1752
MroI	TCCGGA	1 cut(s)	598
MscI	TGGCCA	1 cut(s)	1447
MslI	CAYNNNNRTG	1 cut(s)	938
Msp20I	TGGCCA	1 cut(s)	1447
MspA1I	CMGCKG	4 cut(s)	253, 331, 1305, 1808
MspI	CCGG	6 cut(s)	108, 599, 606, 776, 1141, 1364
MspR9I	CCNGG	5 cut(s)	777, 1142, 1364, 1672, 1884
MunI	CAATTG	1 cut(s)	945
MvaI	CCWGG	2 cut(s)	1672, 1884
MvnI	CGCG	3 cut(s)	154, 305, 678
MwoI	GCNNNNNNNGC	8 cut(s)	253, 304, 586, 1000, 1013, 1022, 1080, 1219
NciI	CCSGG	3 cut(s)	777, 1142, 1364
NcoI	CCATGG	3 cut(s)	360, 662, 1950
NlaIV	GGNNCC	8 cut(s)	35, 115, 116, 358, 630, 1689, 1702, 1989
NmuCI	GTSAC	4 cut(s)	76, 857, 1100, 1435
NsiI	ATGCAT	2 cut(s)	1400, 1752
NspI	RCATGY	3 cut(s)	1398, 1459, 1805
PaeI	GCATGC	2 cut(s)	1398, 1459
PagI	TCATGA	1 cut(s)	66
PciSI	GCTCTTC	3 cut(s)	665, 1526, 2015
PcsI	WCGNNNNNNNCGW	4 cut(s)	18, 381, 387, 510
PfeI	GAWTC	3 cut(s)	602, 970, 1532
PflMI	CCANNNNNTGG	2 cut(s)	663, 1956
PfoI	TCCNGGA	1 cut(s)	775
PinAI	ACCGGT	1 cut(s)	107
PleI	GAGTC	4 cut(s)	277, 1090, 1343, 1401
PpsI	GAGTC	4 cut(s)	277, 1090, 1343, 1401
PpuMI	RGGWCCY	1 cut(s)	1988
PshBI	ATTAAT	1 cut(s)	1089
PsiI	TTATAA	1 cut(s)	1182
Psp124BI	GAGCTC	1 cut(s)	1521
Psp5II	RGGWCCY	1 cut(s)	1988
Psp6I	CCWGG	2 cut(s)	1670, 1882
PspEI	GGTNACC	1 cut(s)	857
PspFI	CCCAGC	2 cut(s)	117, 1245
PspGI	CCWGG	2 cut(s)	1670, 1882
PspN4I	GGNNCC	8 cut(s)	35, 115, 116, 358, 630, 1689, 1702, 1989
PspOMI	GGGCCC	1 cut(s)	114
PspPI	GGNCC	7 cut(s)	105, 114, 115, 357, 1700, 1867, 1988
PspPPI	RGGWCCY	1 cut(s)	1988
PsuI	RGATCY	1 cut(s)	33
PvuII	CAGCTG	2 cut(s)	1305, 1808
RsaI	GTAC	4 cut(s)	518, 702, 815, 1043
RsaNI	GTAC	4 cut(s)	517, 701, 814, 1042
RseI	CAYNNNNRTG	1 cut(s)	938
SacI	GAGCTC	1 cut(s)	1521
SapI	GCTCTTC	3 cut(s)	665, 1526, 2015
Sau96I	GGNCC	7 cut(s)	105, 114, 115, 357, 1700, 1867, 1988
ScaI	AGTACT	1 cut(s)	815
SchI	GAGTC	4 cut(s)	277, 1090, 1343, 1401
ScrFI	CCNGG	5 cut(s)	777, 1142, 1364, 1672, 1884
SduI	GDGCHC	3 cut(s)	118, 656, 1521
SexAI	ACCWGGT	1 cut(s)	1882
SfaNI	GCATC	6 cut(s)	1070, 1125, 1209, 1312, 1486, 1897
SinI	GGWCC	4 cut(s)	105, 357, 1867, 1988
SmiMI	CAYNNNNRTG	1 cut(s)	938
SmlI	CTYRAG	4 cut(s)	989, 1121, 1351, 1859
SmoI	CTYRAG	4 cut(s)	989, 1121, 1351, 1859
SphI	GCATGC	2 cut(s)	1398, 1459
Sse9I	AATT	9 cut(s)	412, 619, 643, 945, 980, 1090, 1554, 1666, 1966
SspI	AATATT	1 cut(s)	1541
SspMI	CTAG	3 cut(s)	239, 1199, 1313
SstI	GAGCTC	1 cut(s)	1521
StyD4I	CCNGG	5 cut(s)	775, 1140, 1362, 1670, 1882
StyI	CCWWGG	3 cut(s)	360, 662, 1950
TaaI	ACNGT	7 cut(s)	178, 506, 525, 792, 1491, 1730, 1871
TaiI	ACGT	2 cut(s)	324, 1894
TaqI	TCGA	3 cut(s)	375, 390, 868
TasI	AATT	9 cut(s)	412, 619, 643, 945, 980, 1090, 1554, 1666, 1966
TatI	WGTACW	2 cut(s)	516, 813
TfiI	GAWTC	3 cut(s)	602, 970, 1532
TscAI	CASTG	3 cut(s)	481, 1214, 1647
TseFI	GTSAC	4 cut(s)	76, 857, 1100, 1435
TseI	GCWGC	7 cut(s)	121, 253, 919, 1016, 1166, 1305, 1805
Tsp45I	GTSAC	4 cut(s)	76, 857, 1100, 1435
TspDTI	ATGAA	4 cut(s)	1203, 1563, 1694, 2002
TspGWI	ACGGA	4 cut(s)	64, 940, 1559, 1892
TspRI	CASTG	3 cut(s)	481, 1214, 1647
Van91I	CCANNNNNTGG	2 cut(s)	663, 1956
VpaK11BI	GGWCC	4 cut(s)	105, 357, 1867, 1988
VspI	ATTAAT	1 cut(s)	1089
XapI	RAATTY	1 cut(s)	1666
XceI	RCATGY	3 cut(s)	1398, 1459, 1805
XmiI	GTMKAC	1 cut(s)	1896
XspI	CTAG	3 cut(s)	239, 1199, 1313
ZrmI	AGTACT	1 cut(s)	815
Zsp2I	ATGCAT	2 cut(s)	1400, 1752

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.