Rh7CG234200

Domain of unknown function

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0003301
Physical Location & Seq
Forward (+)
21875901 .. 21877048
1148 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG234200.1

Sequence Viewer

Length: 804 bp
ATGGACCAGAGGTTGAAGAAGGCTTCTCAATCTGGAGATATTGATTTCTTGTACAGATTGATTATGGAGGATGGTGAACTTCTAGATCACATTACTGGGGCATCATTTTTCGATACTCCTCTACACATAGCTGCCGCCGAAGGGCATACACAGTTTGCCATGGAGATAATGAGGCTAAAGCCATCATTTGCTAGGAAGCCGAACCAAGATGGATTTAGTCCCATGCACTTGGCCCTGCAAAGTGGAAAAACCAGGATGGTGGTTCGTCTCCTAGATGCTGATAGAAGCCTTGTTCGGGTGCCAGGGAGGGAGGGTGTGACACCCTTGCACTATGTAGTCAAGGAAGGAAATATCGGACTCTTAGATGTGTTTCTATCGGCCTGCCCAAAATCCTTGGAGGATGTGACAATTCGAAACGAGACCTCTCTGCATATTGCGTTGAAAAATGACAAGATCGAAGCATTTGAATTTGTGTTGAGATGGCTAAAAGAGGTCTGTTATGAAGAGGTACATCAACTGGAGAAAAAGGTTTTGAACTGGAAGGATGAGGATGGCAACACTTTGTTGCACATTGCAACACTTAGAAATCAACCTGAGGCAGTTATGCTTTTATTGACCTCACAAGTTGATGTAAACTTCAAGAATTTGGCGGGTTGGACTCCCCTGGACATCATACAGCATCAACAGCCACTCAATGACAGACGAATAAGGACTATGCTAAGTGGTGCTGGAGCTCTTGAAGGATGTTCAGTTCTGTCTGTTCCAACCTTCACGTATTACAAAAGGTTGAGGAACTCATTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001508 GO:0002027 GO:0002376 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006810 GO:0006811 GO:0006812 GO:0006816 GO:0006873 GO:0006874 GO:0006875 GO:0006888 GO:0006928 GO:0006936 GO:0006937 GO:0006941 GO:0006942 GO:0006950 GO:0006952 GO:0006955 GO:0007009 GO:0007154 GO:0007165 GO:0007267 GO:0007275 GO:0007507 GO:0008015 GO:0008016 GO:0008092 GO:0008104 GO:0008150 GO:0009719 GO:0009725 GO:0009751 GO:0009893 GO:0009987 GO:0010033 GO:0010256 GO:0010468 GO:0010522 GO:0010604 GO:0010628 GO:0010646 GO:0010880 GO:0010881 GO:0010882 GO:0010959 GO:0014070 GO:0014704 GO:0016020 GO:0016043 GO:0016192 GO:0016323 GO:0019222 GO:0019722 GO:0019725 GO:0019899 GO:0019900 GO:0019901 GO:0019932 GO:0022898 GO:0023051 GO:0023052 GO:0030001 GO:0030003 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030048 GO:0030054 GO:0030154 GO:0030315 GO:0030507 GO:0030674 GO:0031430 GO:0031647 GO:0031672 GO:0031674 GO:0032409 GO:0032411 GO:0032412 GO:0032414 GO:0032501 GO:0032502 GO:0032879 GO:0032970 GO:0033036 GO:0033292 GO:0033365 GO:0034394 GO:0034613 GO:0034762 GO:0034764 GO:0034765 GO:0034767 GO:0035556 GO:0035637 GO:0036309 GO:0036371 GO:0042221 GO:0042383 GO:0042391 GO:0042493 GO:0042592 GO:0042692 GO:0043034 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043266 GO:0043268 GO:0043269 GO:0043270 GO:0043292 GO:0044057 GO:0044093 GO:0044291 GO:0044325 GO:0044422 GO:0044424 GO:0044425 GO:0044444 GO:0044449 GO:0044459 GO:0044464 GO:0045087 GO:0046677 GO:0046907 GO:0048193 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048731 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050821 GO:0050896 GO:0051049 GO:0051050 GO:0051117 GO:0051179 GO:0051234 GO:0051239 GO:0051270 GO:0051279 GO:0051282 GO:0051641 GO:0051649 GO:0051716 GO:0051899 GO:0051924 GO:0051928 GO:0055001 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055117 GO:0060047 GO:0060048 GO:0060090 GO:0060255 GO:0060306 GO:0060307 GO:0060341 GO:0061024 GO:0061061 GO:0061337 GO:0065007 GO:0065008 GO:0065009 GO:0070252 GO:0070296 GO:0070727 GO:0070838 GO:0070972 GO:0071840 GO:0071944 GO:0072359 GO:0072503 GO:0072507 GO:0072511 GO:0072657 GO:0072659 GO:0086001 GO:0086002 GO:0086003 GO:0086004 GO:0086005 GO:0086010 GO:0086012 GO:0086014 GO:0086015 GO:0086018 GO:0086019 GO:0086026 GO:0086046 GO:0086065 GO:0086066 GO:0086070 GO:0086091 GO:0090257 GO:0098590 GO:0098771 GO:0098900 GO:0098901 GO:0098907 GO:0098910 GO:0099080 GO:0099081 GO:0099512 GO:0099623 GO:1901016 GO:1901018 GO:1901019 GO:1901021 GO:1901379 GO:1901381 GO:1901700 GO:1903115 GO:1903169 GO:1903522 GO:1903779 GO:1904062 GO:1904064 GO:1904427 GO:1990778 GO:2001257 GO:2001259
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_3 Ank_4 Ank_5 PGG

Protein Analysis

267

Amino Acids

30.33

Weight (kDa)

6.51

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 7 - 93 4.4e-08 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 298
AciI CCGC 2 cut(s) 135, 650
AcsI RAATTY 2 cut(s) 467, 643
AfaI GTAC 2 cut(s) 53, 510
AfiI CCNNNNNNNGG 2 cut(s) 141, 295
AgsI TTSAA 6 cut(s) 16, 442, 467, 535, 640, 740
AjnI CCWGG 3 cut(s) 251, 301, 663
AloI GAACNNNNNNTCC 2 cut(s) 735, 767
AluBI AGCT 2 cut(s) 131, 734
AluI AGCT 2 cut(s) 131, 734
Alw21I GWGCWC 1 cut(s) 736
Alw26I GTCTC 2 cut(s) 272, 413
AoxI GGCC 2 cut(s) 231, 378
ApeKI GCWGC 1 cut(s) 131
ApoI RAATTY 2 cut(s) 467, 643
AspS9I GGNCC 2 cut(s) 4, 232
AsuHPI GGTGA 1 cut(s) 86
AsuII TTCGAA 1 cut(s) 412
AvaII GGWCC 1 cut(s) 4
AxyI CCTNAGG 1 cut(s) 594
BanI GGYRCC 1 cut(s) 298
BanII GRGCYC 1 cut(s) 736
Bbv12I GWGCWC 1 cut(s) 736
BbvI GCAGC 1 cut(s) 118
BccI CCATC 6 cut(s) 65, 190, 203, 250, 474, 545
BciT130I CCWGG 3 cut(s) 253, 303, 665
BcoDI GTCTC 2 cut(s) 272, 413
BfaI CTAG 3 cut(s) 83, 192, 272
BisI GCNGC 2 cut(s) 132, 135
BlsI GCNGC 2 cut(s) 133, 136
Bme1390I CCNGG 3 cut(s) 253, 303, 665
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 2 cut(s) 4, 232
BmiI GGNNCC 1 cut(s) 300
BmrFI CCNGG 3 cut(s) 253, 303, 665
BmrI ACTGGG 1 cut(s) 105
BmsI GCATC 3 cut(s) 110, 265, 688
BmuI ACTGGG 1 cut(s) 105
BpmI CTGGAG 3 cut(s) 54, 539, 750
Bpu14I TTCGAA 1 cut(s) 412
BsaAI YACGTR 1 cut(s) 774
BsaI GGTCTC 1 cut(s) 413
BsaJI CCNNGG 4 cut(s) 159, 302, 393, 663
BsaXI ACNNNNNCTCC 2 cut(s) 298, 328
Bsc4I CCNNNNNNNGG 2 cut(s) 141, 295
Bse1I ACTGG 3 cut(s) 100, 522, 542
Bse21I CCTNAGG 1 cut(s) 594
Bse3DI GCAATG 1 cut(s) 570
BseBI CCWGG 3 cut(s) 253, 303, 665
BseDI CCNNGG 4 cut(s) 159, 302, 393, 663
BseGI GGATG 6 cut(s) 76, 261, 406, 550, 556, 749
BseLI CCNNNNNNNGG 2 cut(s) 141, 295
BseMI GCAATG 1 cut(s) 570
BseMII CTCAG 1 cut(s) 585
BseNI ACTGG 3 cut(s) 100, 522, 542
BseRI GAGGAG 1 cut(s) 108
BseXI GCAGC 1 cut(s) 118
BshFI GGCC 2 cut(s) 233, 380
BshNI GGYRCC 1 cut(s) 298
BsiHKAI GWGCWC 1 cut(s) 736
BslFI GGGAC 1 cut(s) 204
BslI CCNNNNNNNGG 2 cut(s) 141, 295
BsmAI GTCTC 2 cut(s) 272, 413
BsmBI CGTCTC 1 cut(s) 272
BsmFI GGGAC 1 cut(s) 204
BsnI GGCC 2 cut(s) 233, 380
Bso31I GGTCTC 1 cut(s) 413
Bsp119I TTCGAA 1 cut(s) 412
Bsp1286I GDGCHC 1 cut(s) 736
Bsp1407I TGTACA 1 cut(s) 51
Bsp143I GATC 2 cut(s) 85, 453
Bsp19I CCATGG 1 cut(s) 159
BspACI CCGC 2 cut(s) 135, 650
BspANI GGCC 2 cut(s) 233, 380
BspCNI CTCAG 1 cut(s) 586
BspLI GGNNCC 1 cut(s) 300
BspT104I TTCGAA 1 cut(s) 412
BspT107I GGYRCC 1 cut(s) 298
BspTNI GGTCTC 1 cut(s) 413
BsrDI GCAATG 1 cut(s) 570
BsrGI TGTACA 1 cut(s) 51
BsrI ACTGG 3 cut(s) 100, 522, 542
BssECI CCNNGG 4 cut(s) 159, 302, 393, 663
BssMI GATC 2 cut(s) 85, 453
BssT1I CCWWGG 2 cut(s) 159, 393
Bst2UI CCWGG 3 cut(s) 253, 303, 665
Bst4CI ACNGT 1 cut(s) 153
Bst6I CTCTTC 1 cut(s) 498
BstAUI TGTACA 1 cut(s) 51
BstBAI YACGTR 1 cut(s) 774
BstBI TTCGAA 1 cut(s) 412
BstC8I GCNNGC 1 cut(s) 382
BstDEI CTNAG 4 cut(s) 361, 581, 594, 719
BstDSI CCRYGG 1 cut(s) 159
BstF5I GGATG 6 cut(s) 76, 261, 406, 550, 556, 749
BstKTI GATC 2 cut(s) 88, 456
BstMAI GTCTC 2 cut(s) 272, 413
BstMBI GATC 2 cut(s) 85, 453
BstMWI GCNNNNNNNGC 1 cut(s) 685
BstNI CCWGG 3 cut(s) 253, 303, 665
BstSCI CCNGG 3 cut(s) 251, 301, 663
BstV1I GCAGC 1 cut(s) 118
BstXI CCANNNNNNTGG 2 cut(s) 229, 259
Bsu36I CCTNAGG 1 cut(s) 594
BsuRI GGCC 2 cut(s) 233, 380
BtgI CCRYGG 1 cut(s) 159
BtsCI GGATG 6 cut(s) 76, 261, 406, 550, 556, 749
Cac8I GCNNGC 1 cut(s) 382
Cfr13I GGNCC 2 cut(s) 4, 232
Csp6I GTAC 2 cut(s) 52, 509
CviAII CATG 2 cut(s) 160, 223
CviQI GTAC 2 cut(s) 52, 509
DdeI CTNAG 4 cut(s) 361, 581, 594, 719
DpnI GATC 2 cut(s) 87, 455
DpnII GATC 2 cut(s) 85, 453
Eam1104I CTCTTC 1 cut(s) 498
EarI CTCTTC 1 cut(s) 498
Ecl136II GAGCTC 1 cut(s) 734
Eco130I CCWWGG 2 cut(s) 159, 393
Eco24I GRGCYC 1 cut(s) 736
Eco31I GGTCTC 1 cut(s) 413
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 734
Eco81I CCTNAGG 1 cut(s) 594
EcoICRI GAGCTC 1 cut(s) 734
EcoRII CCWGG 3 cut(s) 251, 301, 663
EcoT14I CCWWGG 2 cut(s) 159, 393
EcoT38I GRGCYC 1 cut(s) 736
ErhI CCWWGG 2 cut(s) 159, 393
Esp3I CGTCTC 1 cut(s) 272
FaeI CATG 2 cut(s) 163, 226
FaqI GGGAC 1 cut(s) 204
FatI CATG 2 cut(s) 159, 222
FauI CCCGC 1 cut(s) 643
Fnu4HI GCNGC 2 cut(s) 132, 135
FokI GGATG 6 cut(s) 83, 268, 413, 557, 563, 756
FriOI GRGCYC 1 cut(s) 736
Fsp4HI GCNGC 2 cut(s) 132, 135
FspBI CTAG 3 cut(s) 83, 192, 272
GluI GCNGC 2 cut(s) 132, 135
GsuI CTGGAG 3 cut(s) 54, 539, 750
HaeIII GGCC 2 cut(s) 233, 380
Hin1II CATG 2 cut(s) 163, 226
HinfI GANTC 2 cut(s) 357, 658
HphI GGTGA 1 cut(s) 86
Hpy166II GTNNAC 2 cut(s) 77, 634
Hpy188I TCNGA 1 cut(s) 356
Hpy188III TCNNGA 4 cut(s) 33, 83, 640, 737
Hpy8I GTNNAC 2 cut(s) 77, 634
HpyAV CCTTC 6 cut(s) 13, 134, 338, 535, 734, 778
HpyCH4III ACNGT 1 cut(s) 153
HpyCH4IV ACGT 1 cut(s) 773
HpyCH4V TGCA 6 cut(s) 226, 238, 328, 430, 568, 575
HpyF10VI GCNNNNNNNGC 1 cut(s) 685
HpyF3I CTNAG 4 cut(s) 361, 581, 594, 719
HpySE526I ACGT 1 cut(s) 773
Hsp92II CATG 2 cut(s) 163, 226
Kzo9I GATC 2 cut(s) 85, 453
LmnI GCTCC 1 cut(s) 731
Lsp1109I GCAGC 1 cut(s) 118
LweI GCATC 3 cut(s) 110, 265, 688
MaeI CTAG 3 cut(s) 83, 192, 272
MaeII ACGT 1 cut(s) 773
MaeIII GTNAC 2 cut(s) 316, 403
MalI GATC 2 cut(s) 87, 455
MboI GATC 2 cut(s) 85, 453
MboII GAAGA 2 cut(s) 28, 515
MhlI GDGCHC 1 cut(s) 736
MluCI AATT 3 cut(s) 408, 467, 643
MlyI GAGTC 2 cut(s) 351, 652
MmeI TCCRAC 2 cut(s) 635, 788
MspR9I CCNGG 3 cut(s) 253, 303, 665
MvaI CCWGG 3 cut(s) 253, 303, 665
MwoI GCNNNNNNNGC 1 cut(s) 685
NcoI CCATGG 1 cut(s) 159
NdeII GATC 2 cut(s) 85, 453
NlaIII CATG 2 cut(s) 163, 226
NlaIV GGNNCC 1 cut(s) 300
NmuCI GTSAC 2 cut(s) 316, 403
NspV TTCGAA 1 cut(s) 412
PkrI GCNGC 2 cut(s) 133, 136
PleI GAGTC 2 cut(s) 351, 652
PpsI GAGTC 2 cut(s) 351, 652
Ppu21I YACGTR 1 cut(s) 774
Psp124BI GAGCTC 1 cut(s) 736
Psp6I CCWGG 3 cut(s) 251, 301, 663
PspGI CCWGG 3 cut(s) 251, 301, 663
PspN4I GGNNCC 1 cut(s) 300
PspPI GGNCC 2 cut(s) 4, 232
RsaI GTAC 2 cut(s) 53, 510
RsaNI GTAC 2 cut(s) 52, 509
SacI GAGCTC 1 cut(s) 736
SatI GCNGC 2 cut(s) 132, 135
Sau3AI GATC 2 cut(s) 85, 453
Sau96I GGNCC 2 cut(s) 4, 232
SchI GAGTC 2 cut(s) 351, 652
ScrFI CCNGG 3 cut(s) 253, 303, 665
SduI GDGCHC 1 cut(s) 736
SfaNI GCATC 3 cut(s) 110, 265, 688
SfuI TTCGAA 1 cut(s) 412
SinI GGWCC 1 cut(s) 4
Sse9I AATT 3 cut(s) 408, 467, 643
SsiI CCGC 2 cut(s) 135, 650
SspMI CTAG 3 cut(s) 83, 192, 272
SstI GAGCTC 1 cut(s) 736
StyD4I CCNGG 3 cut(s) 251, 301, 663
StyI CCWWGG 2 cut(s) 159, 393
TaaI ACNGT 1 cut(s) 153
TaiI ACGT 1 cut(s) 776
TaqI TCGA 3 cut(s) 111, 412, 456
TasI AATT 3 cut(s) 408, 467, 643
TatI WGTACW 1 cut(s) 51
TauI GCSGC 1 cut(s) 137
TseFI GTSAC 2 cut(s) 316, 403
TseI GCWGC 1 cut(s) 131
Tsp45I GTSAC 2 cut(s) 316, 403
TspDTI ATGAA 1 cut(s) 516
VpaK11BI GGWCC 1 cut(s) 4
XapI RAATTY 2 cut(s) 467, 643
XbaI TCTAGA 1 cut(s) 82
XspI CTAG 3 cut(s) 83, 192, 272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.