Rh7CG234300

ankyrin repeat family protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0003301
Physical Location & Seq
Forward (+)
21877331 .. 21879128
1798 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG234300.1

Sequence Viewer

Length: 1335 bp
ATGTTATTTCTCAGCACGGATCAAAGGTTGAAGCAGGCTGCGCAAGGGGGGAATATTGGTGGCCTGTATGCACTGATACAGGAGGACTCATATATATTGGAGCGCATCAACCTTGTTCCATTTGTTGATACTCCTTTGCACATTGCTGCATCTTCAGGGCATACTGATTTTGCCATGGAGATGATGAGATTGAAGCCAGAATTTGCAAGGAAGCAAAACCCGGAAGGCTTCAGCGCAATGCACCTTGCTTTGAAGCAAGGAAAAACACATACATTGCTTTTTCTCCTGTCCGTCTATAGGGACCTTGTCCGAGTCAAAGGAAGGGAGGGAAAGACTCTCTTGCATTATGCAGCCGAAATTGGAAACTTAGATCTTTTGGCTGAGTTTTTAGCAGCTTCCCCAGAGTCTATCATAGATCTGACAATTCGAAAAGAAACTGCACTTCATGTTGCTGCAAAGAATGACAAGTTGGAAGCACTTGAAGTCTTGATGGGATGGCTTCACCATGTTGATATGGACATGATCTTGCAGTGGACTGATGATGAAGGCAACACTGTACTGCACATTGCAATATTAAGAAATCAATTCCAGGTGGTGAGGCTGTTAATAAAAAGGGTTGATATAAATGCCAAGAATTTGGAGGGTTTAACAGCAATGGACATATCAGATCACCAAGGAATGTTTAACAATAATACAGAAATAAGAAGTTTATTACTCCAAAGAGGAGCTTTGACAGCTTCTTCACTCCCTAAACTTCCTACTCTTGCAAATTTTCTAAGAACAGAGATGTCATTGCTCGAAAGATGGGTTATGTGTAGTTACCTCACTAAAAGTTGCCTGTCAAATGAGAATCGTAATAATCTTCTAGTGGTAGCTGTCCTGATTGCAACAGCCACATTCCAAGCTGTGCTCAGCCCACCAGCCGGTATGCAGATCTTCAGCACTCCATTTGGTCGTAAAACCAGCAGCGACGGATCTAATAGTACTGGTGAACCCAATGTACCATCAAACTTTGCCTCTCACTTCGTGGTAGCATGGAGTTCTTTCCTGGCTCTGAACACCATGGCTTTCTTGACATCAATATCTGAGATATGGTTTCACCTCCCACGTGGCCTTTATTTTTTGACGAAATTGGTTTTACCACTTTTATTCTGCTACATGATTTCATTGAGTCTCACAACACCAGTGCCAAGCGTGACGCCTTTTTACTTCGCTCTAATTTTTTTCTCTCAATTGAAACGCATAGTCAGCAACTTGTTTTTTAAGAGGTCATTGGACGTAAAGCTATCCCTGTTGAAGTATTGTCCCAACTTACATAGAGAAATTAAAGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 Ank_5 PGG

Protein Analysis

444

Amino Acids

49.85

Weight (kDa)

8.75

Isoelectric Point (pI)

39.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 11 - 97 3.2e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 108 - 164 3.8e-07 Ankyrin repeats (3 copies)
Ank_4 PF13637 148 - 203 3.1e-07 Ankyrin repeats (many copies)
Ank_5 PF13857 171 - 221 2.3e-10 Ankyrin repeats (many copies)
Ank_2 PF12796 177 - 242 8.9e-06 Ankyrin repeats (3 copies)
Ank PF00023 183 - 212 3.4e-06 Ankyrin repeat
PGG PF13962 282 - 389 2.4e-10 Domain of unknown function
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 42
AclWI GGATC 2 cut(s) 27, 982
AcsI RAATTY 3 cut(s) 200, 634, 769
AcuI CTGAAG 3 cut(s) 138, 214, 922
AcvI CACGTG 1 cut(s) 1109
AcyI GRCGYC 1 cut(s) 1199
AdeI CACNNNGTG 1 cut(s) 1027
AfaI GTAC 3 cut(s) 558, 985, 1002
AfiI CCNNNNNNNGG 2 cut(s) 297, 923
AgsI TTSAA 6 cut(s) 31, 193, 253, 482, 1237, 1297
AjnI CCWGG 2 cut(s) 588, 1047
AjuI GAANNNNNNNTTGG 2 cut(s) 452, 484
AluBI AGCT 6 cut(s) 395, 728, 737, 875, 905, 1285
AluI AGCT 6 cut(s) 395, 728, 737, 875, 905, 1285
Alw21I GWGCWC 1 cut(s) 912
Alw26I GTCTC 1 cut(s) 1178
AlwI GGATC 2 cut(s) 27, 982
AoxI GGCC 2 cut(s) 61, 1111
ApeKI GCWGC 6 cut(s) 38, 146, 350, 392, 452, 966
ApoI RAATTY 3 cut(s) 200, 634, 769
AspLEI GCGC 3 cut(s) 43, 105, 236
AspS9I GGNCC 1 cut(s) 301
AsuC2I CCSGG 1 cut(s) 221
AsuHPI GGTGA 5 cut(s) 494, 607, 662, 1001, 1091
AsuII TTCGAA 1 cut(s) 427
AvaII GGWCC 1 cut(s) 301
BbrPI CACGTG 1 cut(s) 1109
Bbv12I GWGCWC 1 cut(s) 912
BbvI GCAGC 6 cut(s) 25, 133, 362, 404, 439, 978
BccI CCATC 4 cut(s) 484, 489, 798, 1012
BciT130I CCWGG 2 cut(s) 590, 1049
BcnI CCSGG 1 cut(s) 221
BcoDI GTCTC 1 cut(s) 1178
BfaI CTAG 1 cut(s) 866
BfmI CTRYAG 1 cut(s) 295
BglII AGATCT 3 cut(s) 370, 415, 933
BisI GCNGC 6 cut(s) 39, 147, 351, 393, 453, 967
BlpI GCTNAGC 1 cut(s) 911
BlsI GCNGC 6 cut(s) 40, 148, 352, 394, 454, 968
BmcAI AGTACT 1 cut(s) 985
Bme1390I CCNGG 3 cut(s) 221, 590, 1049
Bme18I GGWCC 1 cut(s) 301
BmgT120I GGNCC 1 cut(s) 301
BmiI GGNNCC 1 cut(s) 302
BmrFI CCNGG 3 cut(s) 221, 590, 1049
BmsI GCATC 2 cut(s) 114, 158
Bpu1102I GCTNAGC 1 cut(s) 911
Bpu14I TTCGAA 1 cut(s) 427
BpuMI CCSGG 1 cut(s) 221
BsaAI YACGTR 1 cut(s) 1109
BsaHI GRCGYC 1 cut(s) 1199
BsaJI CCNNGG 3 cut(s) 174, 673, 1062
Bsc4I CCNNNNNNNGG 2 cut(s) 297, 923
Bse118I RCCGGY 1 cut(s) 923
Bse1I ACTGG 2 cut(s) 991, 1184
Bse3DI GCAATG 6 cut(s) 141, 243, 272, 564, 660, 791
BseBI CCWGG 2 cut(s) 590, 1049
BseDI CCNNGG 3 cut(s) 174, 673, 1062
BseGI GGATG 1 cut(s) 500
BseLI CCNNNNNNNGG 2 cut(s) 297, 923
BseMI GCAATG 6 cut(s) 141, 243, 272, 564, 660, 791
BseMII CTCAG 4 cut(s) 25, 372, 925, 1077
BseNI ACTGG 2 cut(s) 991, 1184
BseRI GAGGAG 1 cut(s) 738
BseXI GCAGC 6 cut(s) 25, 133, 362, 404, 439, 978
BsgI GTGCAG 2 cut(s) 423, 545
BshFI GGCC 2 cut(s) 63, 1113
BsiHKAI GWGCWC 1 cut(s) 912
BsiSI CCGG 2 cut(s) 221, 924
BslFI GGGAC 2 cut(s) 314, 1290
BslI CCNNNNNNNGG 2 cut(s) 297, 923
BsmAI GTCTC 1 cut(s) 1178
BsmFI GGGAC 2 cut(s) 314, 1290
BsnI GGCC 2 cut(s) 63, 1113
Bsp119I TTCGAA 1 cut(s) 427
Bsp1286I GDGCHC 1 cut(s) 912
Bsp143I GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
Bsp1720I GCTNAGC 1 cut(s) 911
Bsp19I CCATGG 2 cut(s) 174, 1062
BspANI GGCC 2 cut(s) 63, 1113
BspCNI CTCAG 4 cut(s) 24, 373, 924, 1078
BspLI GGNNCC 1 cut(s) 302
BspPI GGATC 2 cut(s) 27, 982
BspT104I TTCGAA 1 cut(s) 427
BsrDI GCAATG 6 cut(s) 141, 243, 272, 564, 660, 791
BsrFI RCCGGY 1 cut(s) 923
BsrI ACTGG 2 cut(s) 991, 1184
BssAI RCCGGY 1 cut(s) 923
BssECI CCNNGG 3 cut(s) 174, 673, 1062
BssMI GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
BssNI GRCGYC 1 cut(s) 1199
BssT1I CCWWGG 3 cut(s) 174, 673, 1062
Bst2UI CCWGG 2 cut(s) 590, 1049
Bst4CI ACNGT 1 cut(s) 556
BstACI GRCGYC 1 cut(s) 1199
BstBAI YACGTR 1 cut(s) 1109
BstBI TTCGAA 1 cut(s) 427
BstC8I GCNNGC 1 cut(s) 36
BstDEI CTNAG 6 cut(s) 11, 367, 381, 776, 911, 1086
BstDSI CCRYGG 2 cut(s) 174, 1062
BstF5I GGATG 1 cut(s) 500
BstHHI GCGC 3 cut(s) 43, 105, 236
BstKTI GATC 7 cut(s) 22, 373, 418, 525, 670, 936, 977
BstMAI GTCTC 1 cut(s) 1178
BstMBI GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
BstMWI GCNNNNNNNGC 3 cut(s) 40, 734, 1248
BstNI CCWGG 2 cut(s) 590, 1049
BstSCI CCNGG 3 cut(s) 219, 588, 1047
BstSFI CTRYAG 1 cut(s) 295
BstV1I GCAGC 6 cut(s) 25, 133, 362, 404, 439, 978
BstX2I RGATCY 4 cut(s) 370, 415, 933, 974
BstXI CCANNNNNNTGG 1 cut(s) 637
BstYI RGATCY 4 cut(s) 370, 415, 933, 974
BsuRI GGCC 2 cut(s) 63, 1113
BtgI CCRYGG 2 cut(s) 174, 1062
BtsCI GGATG 1 cut(s) 500
BtsI GCAGTG 1 cut(s) 536
BtsIMutI CAGTG 4 cut(s) 71, 536, 552, 1191
Cac8I GCNNGC 1 cut(s) 36
CfoI GCGC 3 cut(s) 43, 105, 236
Cfr10I RCCGGY 1 cut(s) 923
Cfr13I GGNCC 1 cut(s) 301
CseI GACGC 1 cut(s) 1207
Csp6I GTAC 3 cut(s) 557, 984, 1001
CviAII CATG 7 cut(s) 175, 446, 506, 520, 1035, 1063, 1159
CviQI GTAC 3 cut(s) 557, 984, 1001
DdeI CTNAG 6 cut(s) 11, 367, 381, 776, 911, 1086
DpnI GATC 7 cut(s) 21, 372, 417, 524, 669, 935, 976
DpnII GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
DraIII CACNNNGTG 1 cut(s) 1027
Eco130I CCWWGG 3 cut(s) 174, 673, 1062
Eco47I GGWCC 1 cut(s) 301
Eco57I CTGAAG 3 cut(s) 138, 214, 922
Eco72I CACGTG 1 cut(s) 1109
EcoO109I RGGNCCY 1 cut(s) 301
EcoRII CCWGG 2 cut(s) 588, 1047
EcoT14I CCWWGG 3 cut(s) 174, 673, 1062
ErhI CCWWGG 3 cut(s) 174, 673, 1062
FaeI CATG 7 cut(s) 178, 449, 509, 523, 1038, 1066, 1162
FalI AAGNNNNNCTT 4 cut(s) 323, 355, 712, 744
FaqI GGGAC 2 cut(s) 314, 1290
FatI CATG 7 cut(s) 174, 445, 505, 519, 1034, 1062, 1158
Fnu4HI GCNGC 6 cut(s) 39, 147, 351, 393, 453, 967
FokI GGATG 1 cut(s) 507
Fsp4HI GCNGC 6 cut(s) 39, 147, 351, 393, 453, 967
FspBI CTAG 1 cut(s) 866
FspI TGCGCA 1 cut(s) 42
GlaI GCGC 3 cut(s) 42, 104, 235
GluI GCNGC 6 cut(s) 39, 147, 351, 393, 453, 967
HaeIII GGCC 2 cut(s) 63, 1113
HapII CCGG 2 cut(s) 221, 924
HgaI GACGC 1 cut(s) 1207
HhaI GCGC 3 cut(s) 43, 105, 236
Hin1I GRCGYC 1 cut(s) 1199
Hin1II CATG 7 cut(s) 178, 449, 509, 523, 1038, 1066, 1162
Hin6I GCGC 3 cut(s) 41, 103, 234
HinP1I GCGC 3 cut(s) 41, 103, 234
HinfI GANTC 6 cut(s) 86, 312, 334, 404, 850, 1171
HpaII CCGG 2 cut(s) 221, 924
HphI GGTGA 5 cut(s) 494, 607, 662, 1001, 1091
Hpy166II GTNNAC 2 cut(s) 534, 992
Hpy188I TCNGA 5 cut(s) 311, 420, 667, 1056, 1087
Hpy188III TCNNGA 3 cut(s) 487, 880, 1072
Hpy8I GTNNAC 2 cut(s) 534, 992
Hpy99I CGWCG 1 cut(s) 974
HpyAV CCTTC 3 cut(s) 218, 315, 539
HpyCH4III ACNGT 1 cut(s) 556
HpyCH4IV ACGT 2 cut(s) 1108, 1278
HpyF10VI GCNNNNNNNGC 3 cut(s) 40, 734, 1248
HpyF3I CTNAG 6 cut(s) 11, 367, 381, 776, 911, 1086
HpySE526I ACGT 2 cut(s) 1108, 1278
Hsp92I GRCGYC 1 cut(s) 1199
Hsp92II CATG 7 cut(s) 178, 449, 509, 523, 1038, 1066, 1162
HspAI GCGC 3 cut(s) 41, 103, 234
Kzo9I GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
LmnI GCTCC 2 cut(s) 100, 725
Lsp1109I GCAGC 6 cut(s) 25, 133, 362, 404, 439, 978
LweI GCATC 2 cut(s) 114, 158
MaeI CTAG 1 cut(s) 866
MaeII ACGT 2 cut(s) 1108, 1278
MaeIII GTNAC 2 cut(s) 818, 1195
MalI GATC 7 cut(s) 21, 372, 417, 524, 669, 935, 976
MboI GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
MboII GAAGA 4 cut(s) 144, 732, 854, 928
MfeI CAATTG 1 cut(s) 1232
MflI RGATCY 4 cut(s) 370, 415, 933, 974
MhlI GDGCHC 1 cut(s) 912
MlyI GAGTC 5 cut(s) 80, 321, 328, 413, 1180
MmeI TCCRAC 1 cut(s) 450
MnlI CCTC 9 cut(s) 76, 319, 591, 634, 716, 833, 1027, 1112, 1260
MseI TTAA 6 cut(s) 575, 605, 647, 684, 1263, 1326
MslI CAYNNNNRTG 1 cut(s) 179
MspI CCGG 2 cut(s) 221, 924
MspR9I CCNGG 3 cut(s) 221, 590, 1049
MunI CAATTG 1 cut(s) 1232
MvaI CCWGG 2 cut(s) 590, 1049
MwoI GCNNNNNNNGC 3 cut(s) 40, 734, 1248
NciI CCSGG 1 cut(s) 221
NcoI CCATGG 2 cut(s) 174, 1062
NdeII GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
NlaIII CATG 7 cut(s) 178, 449, 509, 523, 1038, 1066, 1162
NlaIV GGNNCC 1 cut(s) 302
NmuCI GTSAC 1 cut(s) 1195
NsbI TGCGCA 1 cut(s) 42
NspV TTCGAA 1 cut(s) 427
PfeI GAWTC 1 cut(s) 850
PflFI GACNNNGTC 1 cut(s) 305
PkrI GCNGC 6 cut(s) 40, 148, 352, 394, 454, 968
PleI GAGTC 5 cut(s) 80, 320, 328, 412, 1179
PmaCI CACGTG 1 cut(s) 1109
PmlI CACGTG 1 cut(s) 1109
PpsI GAGTC 5 cut(s) 80, 320, 328, 412, 1179
Ppu21I YACGTR 1 cut(s) 1109
PpuMI RGGWCCY 1 cut(s) 301
Psp5II RGGWCCY 1 cut(s) 301
Psp6I CCWGG 2 cut(s) 588, 1047
PspCI CACGTG 1 cut(s) 1109
PspGI CCWGG 2 cut(s) 588, 1047
PspN4I GGNNCC 1 cut(s) 302
PspPI GGNCC 1 cut(s) 301
PspPPI RGGWCCY 1 cut(s) 301
PsrI GAACNNNNNNTAC 2 cut(s) 984, 1016
PsuI RGATCY 4 cut(s) 370, 415, 933, 974
PsyI GACNNNGTC 1 cut(s) 305
RsaI GTAC 3 cut(s) 558, 985, 1002
RsaNI GTAC 3 cut(s) 557, 984, 1001
RseI CAYNNNNRTG 1 cut(s) 179
SaqAI TTAA 6 cut(s) 575, 605, 647, 684, 1263, 1326
SatI GCNGC 6 cut(s) 39, 147, 351, 393, 453, 967
Sau3AI GATC 7 cut(s) 19, 370, 415, 522, 667, 933, 974
Sau96I GGNCC 1 cut(s) 301
ScaI AGTACT 1 cut(s) 985
SchI GAGTC 5 cut(s) 80, 321, 328, 413, 1180
ScrFI CCNGG 3 cut(s) 221, 590, 1049
SduI GDGCHC 1 cut(s) 912
SfaNI GCATC 2 cut(s) 114, 158
SfcI CTRYAG 1 cut(s) 295
SfuI TTCGAA 1 cut(s) 427
SinI GGWCC 1 cut(s) 301
SmiMI CAYNNNNRTG 1 cut(s) 179
SspI AATATT 2 cut(s) 55, 573
SspMI CTAG 1 cut(s) 866
StyD4I CCNGG 3 cut(s) 219, 588, 1047
StyI CCWWGG 3 cut(s) 174, 673, 1062
TaaI ACNGT 1 cut(s) 556
TaiI ACGT 2 cut(s) 1111, 1281
TaqI TCGA 2 cut(s) 427, 798
TatI WGTACW 2 cut(s) 556, 983
TfiI GAWTC 1 cut(s) 850
Tru1I TTAA 6 cut(s) 575, 605, 647, 684, 1263, 1326
Tru9I TTAA 6 cut(s) 575, 605, 647, 684, 1263, 1326
TscAI CASTG 4 cut(s) 78, 536, 559, 1191
TseFI GTSAC 1 cut(s) 1195
TseI GCWGC 6 cut(s) 38, 146, 350, 392, 452, 966
Tsp45I GTSAC 1 cut(s) 1195
TspDTI ATGAA 3 cut(s) 434, 558, 1155
TspGWI ACGGA 3 cut(s) 32, 280, 987
TspRI CASTG 4 cut(s) 78, 536, 559, 1191
Tth111I GACNNNGTC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 301
XapI RAATTY 3 cut(s) 200, 634, 769
XspI CTAG 1 cut(s) 866
ZrmI AGTACT 1 cut(s) 985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.