Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003685

Physical Location & Seq

Genomic Coordinates Reverse (-)

62841732 .. 62846129

Gene Structure 4398 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004826

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2439 bp

ATGGGTGTTGTTATGTTTTTAGACTTGTCAAGGTCATGGCCAGTGGGGGGCCCGTCGTTATTCACTGCGGTAGGTAGCCACCGCGAAGTTCGTCATATTTGTGATGGAAGCCAGGCCTTCAACATATTCAGTTCCGAACTCTCAATTATGACGTCTGAGGCGACTTCTGCTGCTTTAAACTTTGTTGGAGGGATACCTTTTCAATTGTTGTATGATGGTGTTAAAATGGCCATTAGGAAGACTAGGAAGTTTAGAATTCACCTCATGAATCTCCAATTGAAGCTAGAGTGTTTACGGTCACAATCACGGGTTATCCAACAGATAGGAGAGTATAATGTTCAACTGGATCTCCCAAACAATGTAATCGAAGATCTTCAAAGAAAAATGAATGAGGGTATACAGCTTGTGGGCATGTTATCGAAACTTGGCATGTGGAACATCCGCATCTGGGATAGGTCTCTTAGAAGACTGTTACAACTACTAGAGTTCGAGCAACAGAGGAATGTGACAGAAATCTTAGTCCTGGCAAGATACACCAAAGATAAACAAGATGAAATGGATAAAAGGCAAGCAGAATTTTTGAGATTGCAGCAAGAAATGTTTGCTATGTTGATGGAGCAGCATAACGCACCTGAGAGAATTGCAACGAGTAGTGTGCCACAAGTTGCATTGTCAAATGGAGGAGAAGGGGCAGCTCCTGCTCTAGGACAAGTATTCCAACTGCTTTTCAGTGCTGTTATACAATTGGAGGTCAAGAATATGATGTTTAGACGCCTCTTCCAAAGATTCAAATCCACGCTAAACTGCTTACAACCACTGATAGAAGAGATATCAAAATCTACGAAGGTATTGTATCTTCCAAAGCAAGAAGTAGAAAATTTTATTATCTGTATAAAGAATGGTGTAGAGCTCATTCACGAATGCTCTAAGGTTTGCAAGAAGGTCACCTACAGAAAGTACGATTACATCAACAAAATTATAAATTTGGATGAATCTCTTCAGACTCTCTTCATTGAACTGAAACGGCAGGTGAGAAGGAGTTTGAAAGAGGCCATGGATTCAGCAAATAGTATAGAGGTGGCGATCAGTGGTGTGGTACAAAAGAATGAAGTTGCAAGCAATGCGAAAGAGGAGATAACGGTGAATTTGGAAAGGGTTGTAGAGGAGGTGGTGAAGCCTATTGAAGGGAGTGATGCAGTTCAAGATCAAATGGAAACTGATCAACTGCCGCATGTGAAAACAAGTGATGATGGGAATGAGGAGACATTGTTGGATTTGGCAAGGGTTAAAGACGAGATGATCAAGCCTATTGATGAAGGGAGTGATATGTTAACAAATCAAACTGAATGTGAGATTGCAGCAGCTGAACCTCCATCTTCATTGCCAGCAGTTGAATCGGCATTGGAGTCCACAAGCAATGCAAATGCGGGGCTCAAACAGCCTGAGGAAAAGTGGTTTCCTAGGAAAAACAGCAGCGGTGAAAGAAAGCACTCTGTTGAGGAAAATGAAGAAGCATACCAAGGGACACCGTCAAACGGAAATCAGCATGCAAACGATGACGTTTCCAGAAGAATGCCTAGTCGACATCATCTCATTCACCACTCCTGCAGATGTCTGCAGACTGTCCTCGATTTCCAGGAGTTTCAAGATGGCAGGAGAAGCCGACGAAGTTTGGAAAAATTCCTTCCTCCCCAACATATCGACACGATCCTGTCGCAGTCCACATCTGCATCTACATCAGCAGCGGCTGCCGAATTCAAGGTATCCAAAAAGGAGCTTTACCTAGCTCTCTGCGACAAATCAGTCCTCATCGACAATGGGAAGATGAGCTTCTTTCTGGACAAATGGAGTGGGAAAAAATGTTACATGATATCTGCAAGGGCTCTTTATATTGTTTGGGCAGAAGAGAAATCTAATCAATACTGGAAATGGATTTGTCTGCCTGAGTCCAGGTTTAAGGACGTGGTTTATTTAGAGAGTGTTTGTTGGATCGAAATCCATGGGAGAATTGATATGAGGATGCTGTCTTCATCCACTCTATATAAAGCTTACCTTGTGTACAAGCTAACTGCAGAGGCATATGGATTAAAAGCTCCTGTACAGGTAGCAACTCAAGTAGGGCATTATGGATTAGGTTACGGGGATCTGGCCATTGAAACATATGAGAACAGGCAGAAAGGGTTTCTTTATCCTGCTAAACAAGTCAGTGGAGTTCGATCTCCAAAGGAAAGAGTGGACGGTTGGTTGGAGATAGAGCTGGGTGAGTTTTTATGCCAAGGAGAAGATGATTCGCAGGTGGACATGATATGTGTAGAAATTGACGATCTGTGTTGGAAGAAGGGTCTAGTTGTGGAAGGAATAGAGGTCAGGCCAGAAAGAAAGGAATACTGCCAGCGCAAACAAGAGCGAAAGAGCGAGCCAAAGGCAAGAGAGCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002229 GO:0002237 GO:0002239 GO:0002682 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006952 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009607 GO:0009617 GO:0009628 GO:0009889 GO:0009987 GO:0010033 GO:0010112 GO:0010224 GO:0010337 GO:0010468 GO:0010556 GO:0010565 GO:0010817 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0031347 GO:0031349 GO:0032101 GO:0032103 GO:0032350 GO:0042221 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0043900 GO:0043902 GO:0044424 GO:0044464 GO:0045088 GO:0046885 GO:0048518 GO:0048583 GO:0048584 GO:0050776 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0071216 GO:0071219 GO:0080090 GO:0080134 GO:0080142 GO:0097159 GO:0098542 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Calmodulin_bind

Protein Analysis

813

Amino Acids

92.72

Weight (kDa)

6.05

Isoelectric Point (pI)

57.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	233 - 355	2.3e-21	Arabidopsis broad-spectrum mildew resistance protein RPW8
PP2	PF14299	619 - 791	3.4e-46	Phloem protein 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003685)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g16120 FvH4_5g11100 FvH4_5g11100 FvH4_5g11161 FvH4_5g11162 FvH4_5g11180 FvH4_5g11210 FvH4_5g11210 FvH4_5g11210 FvH4_5g11210
rosa_chinensis	RchiOBHm_Chr7g0186641
rosa_laevigata	RLG00000004826 RLG00000017459
rosa_multiflora	Rmu_sc0000645.1_g000004 Rmu_sc0000645.1_g000008 Rmu_sc0007722.1_g000013 Rmu_sc0007722.1_g000014 Rmu_sc0019397.1_g000001 Rmu_sc0019398.1_g000001
rosa_roxburghii	Rroxscaffold_2G00137900 Rroxscaffold_3G00267920 Rroxscaffold_3G00267960 Rroxscaffold_6G00426770
rosa_samantha	Rh2AG181600 Rh2BG191100 Rh2BG191200 Rh2DG187800 Rh7AG065100 Rh7DG083600
rosa_wichuraiana	Rw0G013220 Rw0G013230 Rw0G013260 Rw0G013270 Rw7G006950 Rw7G007170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	980
AarI	CACCTGC	2 cut(s)	1018, 2284
AasI	GACNNNNNNGTC	1 cut(s)	1802
AatII	GACGTC	1 cut(s)	155
Acc36I	ACCTGC	2 cut(s)	1018, 2284
AccI	GTMKAC	2 cut(s)	397, 1582
AccII	CGCG	1 cut(s)	84
AciI	CCGC	7 cut(s)	68, 82, 442, 1229, 1427, 1476, 1745
AclWI	GGATC	4 cut(s)	354, 1702, 1997, 2151
AcoI	YGGCCR	3 cut(s)	38, 228, 2148
AcsI	RAATTY	7 cut(s)	255, 575, 877, 982, 1144, 1679, 1754
AcuI	CTGAAG	1 cut(s)	983
AcyI	GRCGYC	2 cut(s)	152, 772
AfaI	GTAC	4 cut(s)	959, 1098, 2060, 2100
AfiI	CCNNNNNNNGG	5 cut(s)	47, 448, 704, 1184, 1535
AjiI	CACGTC	1 cut(s)	1963
AjnI	CCWGG	4 cut(s)	111, 522, 1635, 1949
Alw21I	GWGCWC	1 cut(s)	912
Alw26I	GTCTC	2 cut(s)	462, 1256
AlwI	GGATC	4 cut(s)	354, 1702, 1997, 2151
AlwNI	CAGNNNCTG	3 cut(s)	698, 1364, 1748
AoxI	GGCC	7 cut(s)	38, 49, 114, 228, 1050, 2148, 2369
ApaI	GGGCCC	1 cut(s)	53
ApeKI	GCWGC	9 cut(s)	170, 589, 619, 692, 1358, 1361, 1473, 1742, 1748
ApoI	RAATTY	7 cut(s)	255, 575, 877, 982, 1144, 1679, 1754
Asp700I	GAANNNNTTC	2 cut(s)	372, 996
AspA2I	CCTAGG	1 cut(s)	1460
AspLEI	GCGC	1 cut(s)	2397
AspS9I	GGNCC	2 cut(s)	49, 50
AsuHPI	GGTGA	8 cut(s)	251, 937, 1042, 1153, 1183, 1490, 1589, 2273
AvrII	CCTAGG	1 cut(s)	1460
AxyI	CCTNAGG	1 cut(s)	1443
BaeGI	GKGCMC	1 cut(s)	53
BalI	TGGCCA	3 cut(s)	40, 230, 2150
BanII	GRGCYC	4 cut(s)	53, 912, 1434, 1885
BarI	GAAGNNNNNNTAC	4 cut(s)	840, 872, 932, 964
BbsI	GAAGAC	3 cut(s)	245, 472, 2019
Bbv12I	GWGCWC	1 cut(s)	912
BbvI	GCAGC	9 cut(s)	157, 601, 631, 704, 1370, 1373, 1485, 1735, 1754
BccI	CCATC	6 cut(s)	98, 209, 607, 1244, 1381, 1643
BceAI	ACGGC	1 cut(s)	1040
BcgI	CGANNNNNNTGC	4 cut(s)	637, 671, 1377, 1411
BciT130I	CCWGG	4 cut(s)	113, 524, 1637, 1951
BciVI	GTATCC	2 cut(s)	186, 1774
BclI	TGATCA	2 cut(s)	1219, 1299
BcoDI	GTCTC	2 cut(s)	462, 1256
BfaI	CTAG	8 cut(s)	243, 284, 482, 704, 1461, 1578, 1784, 2345
BfmI	CTRYAG	4 cut(s)	949, 1606, 1616, 2070
BfuAI	ACCTGC	2 cut(s)	1018, 2284
BfuI	GTATCC	2 cut(s)	186, 1774
BglII	AGATCT	1 cut(s)	370
BlnI	CCTAGG	1 cut(s)	1460
Bme1390I	CCNGG	4 cut(s)	113, 524, 1637, 1951
BmgBI	CACGTC	1 cut(s)	1963
BmgT120I	GGNCC	2 cut(s)	49, 50
BmiI	GGNNCC	2 cut(s)	50, 51
BmrFI	CCNGG	4 cut(s)	113, 524, 1637, 1951
BmsI	GCATC	4 cut(s)	453, 1183, 1739, 2010
BpiI	GAAGAC	3 cut(s)	245, 472, 2019
BpuEI	CTTGAG	1 cut(s)	2097
BsaBI	GATNNNNATC	2 cut(s)	790, 1994
BsaHI	GRCGYC	2 cut(s)	152, 772
BsaI	GGTCTC	1 cut(s)	462
BsaJI	CCNNGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
BsaXI	ACNNNNNCTCC	4 cut(s)	333, 363, 1253, 1283
Bsc4I	CCNNNNNNNGG	5 cut(s)	47, 448, 704, 1184, 1535
Bse1I	ACTGG	3 cut(s)	41, 348, 1928
Bse21I	CCTNAGG	1 cut(s)	1443
Bse3DI	GCAATG	3 cut(s)	1126, 1379, 1423
Bse8I	GATNNNNATC	2 cut(s)	790, 1994
BseBI	CCWGG	4 cut(s)	113, 524, 1637, 1951
BseDI	CCNNGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
BseGI	GGATG	4 cut(s)	438, 994, 2025, 2030
BseJI	GATNNNNATC	2 cut(s)	790, 1994
BseLI	CCNNNNNNNGG	5 cut(s)	47, 448, 704, 1184, 1535
BseMI	GCAATG	3 cut(s)	1126, 1379, 1423
BseMII	CTCAG	4 cut(s)	147, 624, 1434, 1935
BseNI	ACTGG	3 cut(s)	41, 348, 1928
BseRI	GAGGAG	4 cut(s)	696, 1145, 1178, 1274
BseSI	GKGCMC	1 cut(s)	53
BseXI	GCAGC	9 cut(s)	157, 601, 631, 704, 1370, 1373, 1485, 1735, 1754
BseYI	CCCAGC	1 cut(s)	2257
Bsh1236I	CGCG	1 cut(s)	84
BshFI	GGCC	7 cut(s)	40, 51, 116, 230, 1052, 2150, 2371
BsiHKAI	GWGCWC	1 cut(s)	912
BslFI	GGGAC	1 cut(s)	1537
BslI	CCNNNNNNNGG	5 cut(s)	47, 448, 704, 1184, 1535
BsmAI	GTCTC	2 cut(s)	462, 1256
BsmFI	GGGAC	1 cut(s)	1537
BsmI	GAATGC	2 cut(s)	926, 1578
BsnI	GGCC	7 cut(s)	40, 51, 116, 230, 1052, 2150, 2371
Bso31I	GGTCTC	1 cut(s)	462
Bsp120I	GGGCCC	1 cut(s)	49
Bsp1286I	GDGCHC	4 cut(s)	53, 912, 1434, 1885
Bsp1407I	TGTACA	2 cut(s)	2058, 2098
Bsp19I	CCATGG	2 cut(s)	1053, 1999
BspACI	CCGC	7 cut(s)	68, 82, 442, 1229, 1427, 1476, 1745
BspANI	GGCC	7 cut(s)	40, 51, 116, 230, 1052, 2150, 2371
BspCNI	CTCAG	4 cut(s)	148, 625, 1435, 1936
BspFNI	CGCG	1 cut(s)	84
BspHI	TCATGA	1 cut(s)	264
BspLI	GGNNCC	2 cut(s)	50, 51
BspMAI	CTGCAG	3 cut(s)	1610, 1620, 2074
BspMI	ACCTGC	2 cut(s)	1018, 2284
BspPI	GGATC	4 cut(s)	354, 1702, 1997, 2151
BspTNI	GGTCTC	1 cut(s)	462
BsrDI	GCAATG	3 cut(s)	1126, 1379, 1423
BsrGI	TGTACA	2 cut(s)	2058, 2098
BsrI	ACTGG	3 cut(s)	41, 348, 1928
BssECI	CCNNGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
BssNAI	GTATAC	1 cut(s)	398
BssNI	GRCGYC	2 cut(s)	152, 772
BssT1I	CCWWGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
Bst1107I	GTATAC	1 cut(s)	398
Bst2UI	CCWGG	4 cut(s)	113, 524, 1637, 1951
Bst4CI	ACNGT	6 cut(s)	297, 471, 1141, 1530, 1624, 2240
Bst6I	CTCTTC	5 cut(s)	782, 819, 1002, 1013, 1899
BstACI	GRCGYC	2 cut(s)	152, 772
BstAPI	GCANNNNNTGC	3 cut(s)	698, 1121, 1748
BstAUI	TGTACA	2 cut(s)	2058, 2098
BstC8I	GCNNGC	6 cut(s)	570, 1117, 1386, 1548, 2393, 2417
BstDEI	CTNAG	7 cut(s)	156, 461, 517, 633, 927, 1443, 1944
BstDSI	CCRYGG	2 cut(s)	1053, 1999
BstEII	GGTNACC	1 cut(s)	943
BstENI	CCTNNNNNAGG	2 cut(s)	702, 1182
BstF5I	GGATG	4 cut(s)	438, 994, 2025, 2030
BstFNI	CGCG	1 cut(s)	84
BstHHI	GCGC	1 cut(s)	2397
BstMAI	GTCTC	2 cut(s)	462, 1256
BstMWI	GCNNNNNNNGC	6 cut(s)	167, 698, 1121, 1438, 1659, 1748
BstNI	CCWGG	4 cut(s)	113, 524, 1637, 1951
BstNSI	RCATGY	4 cut(s)	415, 433, 1235, 1550
BstPI	GGTNACC	1 cut(s)	943
BstSCI	CCNGG	4 cut(s)	111, 522, 1635, 1949
BstSFI	CTRYAG	4 cut(s)	949, 1606, 1616, 2070
BstSLI	GKGCMC	1 cut(s)	53
BstUI	CGCG	1 cut(s)	84
BstV1I	GCAGC	9 cut(s)	157, 601, 631, 704, 1370, 1373, 1485, 1735, 1754
BstV2I	GAAGAC	3 cut(s)	245, 472, 2019
BstX2I	RGATCY	3 cut(s)	346, 370, 2143
BstYI	RGATCY	3 cut(s)	346, 370, 2143
BstZ17I	GTATAC	1 cut(s)	398
Bsu36I	CCTNAGG	1 cut(s)	1443
BsuI	GTATCC	2 cut(s)	186, 1774
BsuRI	GGCC	7 cut(s)	40, 51, 116, 230, 1052, 2150, 2371
BtgI	CCRYGG	2 cut(s)	1053, 1999
BtrI	CACGTC	1 cut(s)	1963
BtsCI	GGATG	4 cut(s)	438, 994, 2025, 2030
BtsI	GCAGTG	1 cut(s)	63
BtsIMutI	CAGTG	6 cut(s)	48, 63, 736, 815, 1093, 2212
BveI	ACCTGC	2 cut(s)	1018, 2284
Cac8I	GCNNGC	6 cut(s)	570, 1117, 1386, 1548, 2393, 2417
CaiI	CAGNNNCTG	3 cut(s)	698, 1364, 1748
CciI	TCATGA	1 cut(s)	264
CfoI	GCGC	1 cut(s)	2397
Cfr13I	GGNCC	2 cut(s)	49, 50
CseI	GACGC	1 cut(s)	780
Csp6I	GTAC	4 cut(s)	958, 1097, 2059, 2099
CspCI	CAANNNNNGTGG	2 cut(s)	1831, 1866
CviQI	GTAC	4 cut(s)	958, 1097, 2059, 2099
DdeI	CTNAG	7 cut(s)	156, 461, 517, 633, 927, 1443, 1944
DraI	TTTAAA	1 cut(s)	177
DrdI	GACNNNNNNGTC	1 cut(s)	1802
DseDI	GACNNNNNNGTC	1 cut(s)	1802
EaeI	YGGCCR	3 cut(s)	38, 228, 2148
Eam1104I	CTCTTC	5 cut(s)	782, 819, 1002, 1013, 1899
EarI	CTCTTC	5 cut(s)	782, 819, 1002, 1013, 1899
Ecl136II	GAGCTC	1 cut(s)	910
Eco130I	CCWWGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
Eco147I	AGGCCT	1 cut(s)	116
Eco24I	GRGCYC	4 cut(s)	53, 912, 1434, 1885
Eco31I	GGTCTC	1 cut(s)	462
Eco32I	GATATC	2 cut(s)	831, 1872
Eco53kI	GAGCTC	1 cut(s)	910
Eco57I	CTGAAG	1 cut(s)	983
Eco81I	CCTNAGG	1 cut(s)	1443
Eco91I	GGTNACC	1 cut(s)	943
EcoICRI	GAGCTC	1 cut(s)	910
EcoNI	CCTNNNNNAGG	2 cut(s)	702, 1182
EcoO109I	RGGNCCY	1 cut(s)	49
EcoO65I	GGTNACC	1 cut(s)	943
EcoRI	GAATTC	2 cut(s)	255, 1754
EcoRII	CCWGG	4 cut(s)	111, 522, 1635, 1949
EcoRV	GATATC	2 cut(s)	831, 1872
EcoT14I	CCWWGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
EcoT38I	GRGCYC	4 cut(s)	53, 912, 1434, 1885
ErhI	CCWWGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
FalI	AAGNNNNNCTT	6 cut(s)	1814, 1846, 2037, 2069, 2169, 2201
FaqI	GGGAC	1 cut(s)	1537
FauI	CCCGC	1 cut(s)	1420
FauNDI	CATATG	2 cut(s)	2080, 2161
FbaI	TGATCA	2 cut(s)	1219, 1299
FblI	GTMKAC	2 cut(s)	397, 1582
FokI	GGATG	4 cut(s)	425, 1001, 2017, 2032
FriOI	GRGCYC	4 cut(s)	53, 912, 1434, 1885
FspBI	CTAG	8 cut(s)	243, 284, 482, 704, 1461, 1578, 1784, 2345
GlaI	GCGC	1 cut(s)	2396
GsaI	CCCAGC	1 cut(s)	2261
HaeIII	GGCC	7 cut(s)	40, 51, 116, 230, 1052, 2150, 2371
HgaI	GACGC	1 cut(s)	780
HhaI	GCGC	1 cut(s)	2397
Hin1I	GRCGYC	2 cut(s)	152, 772
Hin6I	GCGC	1 cut(s)	2395
HinP1I	GCGC	1 cut(s)	2395
HincII	GTYRAC	2 cut(s)	1332, 1583
HindII	GTYRAC	2 cut(s)	1332, 1583
HindIII	AAGCTT	1 cut(s)	2046
HinfI	GANTC	9 cut(s)	268, 786, 992, 1003, 1058, 1394, 1406, 1946, 2288
HpaI	GTTAAC	1 cut(s)	1332
HphI	GGTGA	8 cut(s)	251, 937, 1042, 1153, 1183, 1490, 1589, 2273
Hpy166II	GTNNAC	9 cut(s)	293, 398, 1332, 1410, 1583, 1722, 2059, 2236, 2299
Hpy188I	TCNGA	3 cut(s)	136, 157, 1002
Hpy188III	TCNNGA	7 cut(s)	265, 754, 917, 1202, 1566, 1646, 1838
Hpy8I	GTNNAC	9 cut(s)	293, 398, 1332, 1410, 1583, 1722, 2059, 2236, 2299
Hpy99I	CGWCG	2 cut(s)	58, 1668
HpyCH4III	ACNGT	6 cut(s)	297, 471, 1141, 1530, 1624, 2240
HpyCH4IV	ACGT	3 cut(s)	152, 1560, 1962
HpyF10VI	GCNNNNNNNGC	6 cut(s)	167, 698, 1121, 1438, 1659, 1748
HpyF3I	CTNAG	7 cut(s)	156, 461, 517, 633, 927, 1443, 1944
HpySE526I	ACGT	3 cut(s)	152, 1560, 1962
Hsp92I	GRCGYC	2 cut(s)	152, 772
HspAI	GCGC	1 cut(s)	2395
Ksp22I	TGATCA	2 cut(s)	1219, 1299
KspAI	GTTAAC	1 cut(s)	1332
LmnI	GCTCC	4 cut(s)	616, 700, 1774, 2098
Lsp1109I	GCAGC	9 cut(s)	157, 601, 631, 704, 1370, 1373, 1485, 1735, 1754
LweI	GCATC	4 cut(s)	453, 1183, 1739, 2010
MaeI	CTAG	8 cut(s)	243, 284, 482, 704, 1461, 1578, 1784, 2345
MaeII	ACGT	3 cut(s)	152, 1560, 1962
MaeIII	GTNAC	6 cut(s)	297, 471, 505, 943, 1862, 2135
MfeI	CAATTG	3 cut(s)	203, 275, 743
MflI	RGATCY	3 cut(s)	346, 370, 2143
MhlI	GDGCHC	4 cut(s)	53, 912, 1434, 1885
MlsI	TGGCCA	3 cut(s)	40, 230, 2150
MluNI	TGGCCA	3 cut(s)	40, 230, 2150
MlyI	GAGTC	3 cut(s)	997, 1415, 1955
MmeI	TCCRAC	7 cut(s)	166, 340, 742, 1251, 1967, 2226, 2312
Mox20I	TGGCCA	3 cut(s)	40, 230, 2150
MroXI	GAANNNNTTC	2 cut(s)	372, 996
MscI	TGGCCA	3 cut(s)	40, 230, 2150
MseI	TTAA	6 cut(s)	176, 222, 1287, 1331, 1956, 2087
MslI	CAYNNNNRTG	1 cut(s)	99
Msp20I	TGGCCA	3 cut(s)	40, 230, 2150
MspA1I	CMGCKG	3 cut(s)	1364, 1476, 1745
MspR9I	CCNGG	4 cut(s)	113, 524, 1637, 1951
MunI	CAATTG	3 cut(s)	203, 275, 743
Mva1269I	GAATGC	2 cut(s)	926, 1578
MvaI	CCWGG	4 cut(s)	113, 524, 1637, 1951
MvnI	CGCG	1 cut(s)	84
MwoI	GCNNNNNNNGC	6 cut(s)	167, 698, 1121, 1438, 1659, 1748
NcoI	CCATGG	2 cut(s)	1053, 1999
NdeI	CATATG	2 cut(s)	2080, 2161
NlaIV	GGNNCC	2 cut(s)	50, 51
NmuCI	GTSAC	3 cut(s)	297, 505, 943
NspI	RCATGY	4 cut(s)	415, 433, 1235, 1550
PaeI	GCATGC	1 cut(s)	1550
PagI	TCATGA	1 cut(s)	264
PaqCI	CACCTGC	2 cut(s)	1018, 2284
PceI	AGGCCT	1 cut(s)	116
PcsI	WCGNNNNNNNCGW	1 cut(s)	158
PctI	GAATGC	2 cut(s)	926, 1578
PdmI	GAANNNNTTC	2 cut(s)	372, 996
PfeI	GAWTC	6 cut(s)	268, 786, 992, 1058, 1394, 2288
PflFI	GACNNNGTC	1 cut(s)	1528
PfoI	TCCNGGA	1 cut(s)	1635
PleI	GAGTC	3 cut(s)	997, 1414, 1954
PpsI	GAGTC	3 cut(s)	997, 1414, 1954
PsiI	TTATAA	1 cut(s)	980
Psp124BI	GAGCTC	1 cut(s)	912
Psp6I	CCWGG	4 cut(s)	111, 522, 1635, 1949
PspEI	GGTNACC	1 cut(s)	943
PspFI	CCCAGC	1 cut(s)	2257
PspGI	CCWGG	4 cut(s)	111, 522, 1635, 1949
PspN4I	GGNNCC	2 cut(s)	50, 51
PspOMI	GGGCCC	1 cut(s)	49
PspPI	GGNCC	2 cut(s)	49, 50
PstI	CTGCAG	3 cut(s)	1610, 1620, 2074
PstNI	CAGNNNCTG	3 cut(s)	698, 1364, 1748
PsuI	RGATCY	3 cut(s)	346, 370, 2143
PsyI	GACNNNGTC	1 cut(s)	1528
PvuII	CAGCTG	1 cut(s)	1364
RsaI	GTAC	4 cut(s)	959, 1098, 2060, 2100
RsaNI	GTAC	4 cut(s)	958, 1097, 2059, 2099
RseI	CAYNNNNRTG	1 cut(s)	99
SacI	GAGCTC	1 cut(s)	912
SalI	GTCGAC	1 cut(s)	1581
SaqAI	TTAA	6 cut(s)	176, 222, 1287, 1331, 1956, 2087
Sau96I	GGNCC	2 cut(s)	49, 50
SchI	GAGTC	3 cut(s)	997, 1415, 1955
ScrFI	CCNGG	4 cut(s)	113, 524, 1637, 1951
SduI	GDGCHC	4 cut(s)	53, 912, 1434, 1885
SfaNI	GCATC	4 cut(s)	453, 1183, 1739, 2010
SfcI	CTRYAG	4 cut(s)	949, 1606, 1616, 2070
SmiMI	CAYNNNNRTG	1 cut(s)	99
SmlI	CTYRAG	1 cut(s)	2112
SmoI	CTYRAG	1 cut(s)	2112
SphI	GCATGC	1 cut(s)	1550
SseBI	AGGCCT	1 cut(s)	116
SsiI	CCGC	7 cut(s)	68, 82, 442, 1229, 1427, 1476, 1745
SspMI	CTAG	8 cut(s)	243, 284, 482, 704, 1461, 1578, 1784, 2345
SstI	GAGCTC	1 cut(s)	912
StuI	AGGCCT	1 cut(s)	116
StyD4I	CCNGG	4 cut(s)	111, 522, 1635, 1949
StyI	CCWWGG	5 cut(s)	1053, 1460, 1519, 1999, 2275
TaaI	ACNGT	6 cut(s)	297, 471, 1141, 1530, 1624, 2240
TaiI	ACGT	3 cut(s)	155, 1563, 1965
TaqI	TCGA	9 cut(s)	366, 419, 489, 1582, 1629, 1701, 1812, 1992, 2215
TatI	WGTACW	2 cut(s)	2058, 2098
TauI	GCSGC	2 cut(s)	1231, 1748
TfiI	GAWTC	6 cut(s)	268, 786, 992, 1058, 1394, 2288
Tru1I	TTAA	6 cut(s)	176, 222, 1287, 1331, 1956, 2087
Tru9I	TTAA	6 cut(s)	176, 222, 1287, 1331, 1956, 2087
TscAI	CASTG	6 cut(s)	48, 70, 736, 822, 1093, 2212
TseFI	GTSAC	3 cut(s)	297, 505, 943
TseI	GCWGC	9 cut(s)	170, 589, 619, 692, 1358, 1361, 1473, 1742, 1748
Tsp45I	GTSAC	3 cut(s)	297, 505, 943
TspGWI	ACGGA	1 cut(s)	1551
TspRI	CASTG	6 cut(s)	48, 70, 736, 822, 1093, 2212
Tth111I	GACNNNGTC	1 cut(s)	1528
XagI	CCTNNNNNAGG	2 cut(s)	702, 1182
XapI	RAATTY	7 cut(s)	255, 575, 877, 982, 1144, 1679, 1754
XceI	RCATGY	4 cut(s)	415, 433, 1235, 1550
XmaJI	CCTAGG	1 cut(s)	1460
XmiI	GTMKAC	2 cut(s)	397, 1582
XmnI	GAANNNNTTC	2 cut(s)	372, 996
XspI	CTAG	8 cut(s)	243, 284, 482, 704, 1461, 1578, 1784, 2345
ZraI	GACGTC	1 cut(s)	153

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.