Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0003685

Physical Location & Seq

Genomic Coordinates Forward (+)

5933011 .. 5943331

Gene Structure 10321 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G006950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGCCGCCTGATGGGGCGAATTCTACTGCTTTAAACTTTGTTGGAGGAATACCTTTTCAGTTGCTGTATGATGCAGTTAAAATAGCCATTAGGAAGACTAGGAAGTTTAAAATTCACCTCATCAATCTCCAAACGATGCTAGACGATTTACAGTCAGCACAATGGGTTATCCAACGGATAGGAGATTATAATCTTCAACTGCGTCTCCCAAACGATGTAATCGAAAATCTTCAAAGAAAAATGAATGATGGTAGAGAGCTCGTGAACACGGTATCAAAACTTAGCAGGTGGGATATCCGCATCTGGGGCAATTGCTACAACTGCATAGGAGATGACTATGGCGAACAGCTTAATGAATTGAACAGTAATATTAGAAGACTGTTTCAACTACTAGAACTTCAGCAACAGAGGAATGTGGCCGAGCTCTTAGAGTTGGGAAGATCCGCCAATGACAAATTAGATGAAATCAAAGACAAACTAGATAGAATGGAATCACGGGATAGAAGGAAATCAGAAATGATTGCTGAGTTGATGGAGAAGCTGCCGCAGCATAATGGAACGAATGGTGTGCAACAAGTTGCATTGTCAAATGGAGGAGAAGGGGCAGCTCCTGCTCTAAGAGAAGTATTCCAGCTGCTTTTCACTGAAGTTATAAGATTGGAGGTCAAGAATCTGATGTTTAAAAGCCTCTTCCAAAGATTAGAATCCACGCTATACTGCTTACAACCATTGGTAGAAGAGATATCAAAATCTACGAGGGTATTGTATCTTCAAAGGCAAGAAGTAGAAAATTTTATTAGTTGTATAGTGAAAGGTGTAGAGCTCCTTTGCGAATGCTCTAAGGTTTGCAAGAGGGTCACCTATAGAAAGAACGATTACACTGACAAAATTCAAAATTTGGATGAATCTCTTCAGACGCTCTTCATTGAACTGATACAGCAGGTGGGAAGGAGTTTGAAAGAGGCCATGGATTCGGCAGACAGTATAGAGGCGGCGATCAAAGAAATTGAAGGGATTAGTGGTGTGGTACAAAAGAATGATGTTGTGAGCAATGTGAAGGAGGGGACATTGGTGGATTCGGAAAGGGTTATAGAGGAGGCATTGAAGCCTGTTGAAGGGAGTGATGCGGTACAAGATCAAATGAAAACTGATCAATTGCCGCATGAACATCCTTCACCTGCAGTTGGATTGGATGTACACACCTTGAAGAAAACAAGTGATGATGTGAATGAGGAGACATTGTTGGATTTGGCAAGGGTTAAAGACGAGGTCATCAAGCCTATTGATGACGGGAGTGATGTGTTAAAAAATGAAACTGAATGTGAAATTGCAGCAGCTGAACCACCATCTTCATCGCCAGCAGTTGGATCGGCATTCGAATCCACAAGCAATGCAAAGGGAGGGCTCAAACGACTTAAGGAAAAGAAAGGGCAAAGGCAAGCATGCATGGTACTTCTCGCTTGTGTCTCTAAGGGAGAACTAAAGAAATGTTCTGAAAGAAAAGAAAAGGTTTGGGGATGGGGTCATGAAATGGGCAAAAAGTTTTGTTATTGTGTTTTCACTCCTAGGCTCACATTCAGTGCATCTCTACATACTCGAAAAATATCTAATTGTAAGAAACACGATGAAACAGAAATCATCATGCAAGTGGAGTTTCCCTATCAATGCATAGAAAACATTATCTCCCTGACCACTCCTGCAGACGCATGCAGACTGTCCTCGATTTCTTGGAGATTCCGGGGCGCTGCAGAATCCGACGGAACTTGGGAAAATTTCCTTCCTCCTGATATCCACAGGATCCTAGCCCAGTCCACGTCTTCATCTGCTACATCAGTTGACCCTGGCATCTCCAAATCCAAGAAGGAGTTTTACCTCGATCTCTGTGACAACCCAGTTCTCATCGACAATGGCAAGATGAGCTTTTCGCTGGACAAATGGAGTGGGAAGAAATGTTATATGATTTGTGCAAGGGCACTTCATGTTGTTTGGTCAGGAGAAAAACATACATACTGGAAATGGATTTCTGTGCCCGATTCCAGGTTTGAGGAGGTGGCTTGTCTGAACCGTGTTTGTTGGCTTGAAATCCGTGGAAAAATTGATATGCAGATGATGTCTCCATCCACTCTTTATAAGGCTTATATTGTGTATAAGCTAACTGCAGACGCAGATGGATTTCGAGTACCTGTAGAGGTCGCAACTCGTTCAAGGGATTATGGATTTGAATACAAAGATCTTGATCGTGACGGGTTTATAGAATACCCGGATAAGCGGAGAGGGTGTCTGAATCCTGATATACAAATCGATGGAACTCTATCTCCAAAGGAAAGAGTGGACGGCTGGTTGGAAATGGAGCTGGGTGAGTTTTTATGCCAAGGAAAAGAAGATGGGGAGTTGGAAATGATATGTGTGGAAATGAACGATCTGTGTTGGAAGCGTGGTCTTATTGTGCAAGGAATTGAGGTCAGGCCAGAAAGAAAGGAATATTGTGAGGCCAAAGGCAAGGCAAGATCACATTTGCGAGACAAAGGCAAGAAAGCAATGACCACGATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PP2

Protein Analysis

850

Amino Acids

96.62

Weight (kDa)

5.76

Isoelectric Point (pI)

42.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RPW8	PF05659	16 - 155	8.4e-10	Arabidopsis broad-spectrum mildew resistance protein RPW8
RPW8	PF05659	204 - 330	5.3e-19	Arabidopsis broad-spectrum mildew resistance protein RPW8
PP2	PF14299	649 - 823	5.3e-46	Phloem protein 2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003685)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_1g16120 FvH4_5g11100 FvH4_5g11100 FvH4_5g11161 FvH4_5g11162 FvH4_5g11180 FvH4_5g11210 FvH4_5g11210 FvH4_5g11210 FvH4_5g11210
rosa_chinensis	RchiOBHm_Chr7g0186641
rosa_laevigata	RLG00000004826 RLG00000017459
rosa_multiflora	Rmu_sc0000645.1_g000004 Rmu_sc0000645.1_g000008 Rmu_sc0007722.1_g000013 Rmu_sc0007722.1_g000014 Rmu_sc0019397.1_g000001 Rmu_sc0019398.1_g000001
rosa_roxburghii	Rroxscaffold_2G00137900 Rroxscaffold_3G00267920 Rroxscaffold_3G00267960 Rroxscaffold_6G00426770
rosa_samantha	Rh2AG181600 Rh2BG191100 Rh2BG191200 Rh2DG187800 Rh7AG065100 Rh7DG083600
rosa_wichuraiana	Rw0G013220 Rw0G013230 Rw0G013260 Rw0G013270 Rw7G006950 Rw7G007170

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	189, 653, 2130
AarI	CACCTGC	3 cut(s)	276, 931, 1186
Acc36I	ACCTGC	3 cut(s)	276, 931, 1186
AccB7I	CCANNNNNTGG	1 cut(s)	1364
AciI	CCGC	8 cut(s)	5, 298, 444, 545, 992, 1127, 1160, 2269
AclWI	GGATC	4 cut(s)	435, 1375, 1792, 1805
AcoI	YGGCCR	1 cut(s)	417
AcsI	RAATTY	6 cut(s)	19, 111, 790, 888, 895, 1771
AcuI	CTGAAG	3 cut(s)	383, 666, 896
AfaI	GTAC	5 cut(s)	1029, 1131, 1197, 1452, 2181
AfiI	CCNNNNNNNGG	6 cut(s)	11, 304, 1115, 1184, 1364, 2037
AflII	CTTAAG	1 cut(s)	1415
AjiI	CACGTC	1 cut(s)	1815
AjnI	CCWGG	2 cut(s)	1840, 2036
AloI	GAACNNNNNNTCC	2 cut(s)	2299, 2331
Alw21I	GWGCWC	3 cut(s)	261, 426, 825
Alw26I	GTCTC	5 cut(s)	209, 1229, 1471, 2118, 2514
AlwI	GGATC	4 cut(s)	435, 1375, 1792, 1805
AlwNI	CAGNNNCTG	3 cut(s)	64, 611, 1337
AoxI	GGCC	4 cut(s)	417, 963, 2465, 2490
ApeKI	GCWGC	7 cut(s)	541, 547, 605, 634, 1331, 1334, 1745
ApoI	RAATTY	6 cut(s)	19, 111, 790, 888, 895, 1771
Asp700I	GAANNNNTTC	2 cut(s)	228, 909
AspA2I	CCTAGG	1 cut(s)	1565
AspLEI	GCGC	1 cut(s)	1745
AsuC2I	CCSGG	2 cut(s)	1739, 2261
AsuHPI	GGTGA	4 cut(s)	107, 850, 1167, 2369
AsuII	TTCGAA	1 cut(s)	1377
AvrII	CCTAGG	1 cut(s)	1565
BaeGI	GKGCMC	2 cut(s)	1975, 2031
BamHI	GGATCC	1 cut(s)	1797
BanII	GRGCYC	4 cut(s)	261, 426, 825, 1407
BarI	GAAGNNNNNNTAC	4 cut(s)	753, 785, 1853, 1885
BauI	CACGAG	1 cut(s)	260
BbsI	GAAGAC	3 cut(s)	101, 382, 1809
Bbv12I	GWGCWC	3 cut(s)	261, 426, 825
BbvI	GCAGC	7 cut(s)	528, 559, 617, 621, 1343, 1346, 1732
BccI	CCATC	9 cut(s)	5, 242, 526, 1354, 1512, 2125, 2162, 2297, 2378
BceAI	ACGGC	1 cut(s)	2350
BcgI	CGANNNNNNTGC	4 cut(s)	550, 584, 1350, 1384
BciT130I	CCWGG	2 cut(s)	1842, 2038
BclI	TGATCA	1 cut(s)	1150
BcnI	CCSGG	2 cut(s)	1739, 2261
BcoDI	GTCTC	5 cut(s)	209, 1229, 1471, 2118, 2514
BfaI	CTAG	6 cut(s)	99, 140, 392, 479, 1566, 1802
BfmI	CTRYAG	6 cut(s)	862, 1179, 1698, 1746, 2157, 2184
BfoI	RGCGCY	1 cut(s)	1746
BfrI	CTTAAG	1 cut(s)	1415
BfuAI	ACCTGC	3 cut(s)	276, 931, 1186
BglII	AGATCT	1 cut(s)	2230
BlnI	CCTAGG	1 cut(s)	1565
Bme1390I	CCNGG	4 cut(s)	1739, 1842, 2038, 2261
BmgBI	CACGTC	1 cut(s)	1815
BmiI	GGNNCC	1 cut(s)	1799
BmrFI	CCNGG	4 cut(s)	1739, 1842, 2038, 2261
BmrI	ACTGGG	2 cut(s)	1801, 1886
BmsI	GCATC	6 cut(s)	61, 126, 309, 1114, 1592, 1854
BmuI	ACTGGG	2 cut(s)	1801, 1886
BpiI	GAAGAC	3 cut(s)	101, 382, 1809
Bpu14I	TTCGAA	1 cut(s)	1377
BpuMI	CCSGG	2 cut(s)	1739, 2261
Bsa29I	ATCGAT	1 cut(s)	2301
BsaBI	GATNNNNATC	3 cut(s)	189, 703, 2235
BsaJI	CCNNGG	6 cut(s)	966, 1565, 1738, 1840, 2086, 2371
Bsc4I	CCNNNNNNNGG	6 cut(s)	11, 304, 1115, 1184, 1364, 2037
Bse1I	ACTGG	3 cut(s)	1807, 1892, 2015
Bse3DI	GCAATG	3 cut(s)	1057, 1396, 2544
Bse8I	GATNNNNATC	3 cut(s)	189, 703, 2235
BseBI	CCWGG	2 cut(s)	1842, 2038
BseCI	ATCGAT	1 cut(s)	2301
BseDI	CCNNGG	6 cut(s)	966, 1565, 1738, 1840, 2086, 2371
BseGI	GGATG	5 cut(s)	907, 1168, 1198, 1523, 2117
BseJI	GATNNNNATC	3 cut(s)	189, 703, 2235
BseLI	CCNNNNNNNGG	6 cut(s)	11, 304, 1115, 1184, 1364, 2037
BseMI	GCAATG	3 cut(s)	1057, 1396, 2544
BseMII	CTCAG	1 cut(s)	516
BseNI	ACTGG	3 cut(s)	1807, 1892, 2015
BseRI	GAGGAG	4 cut(s)	609, 1109, 1247, 2060
BseSI	GKGCMC	2 cut(s)	1975, 2031
BseXI	GCAGC	7 cut(s)	528, 559, 617, 621, 1343, 1346, 1732
BseYI	CCCAGC	1 cut(s)	2353
BshFI	GGCC	4 cut(s)	419, 965, 2467, 2492
BshVI	ATCGAT	1 cut(s)	2301
BsiHKAI	GWGCWC	3 cut(s)	261, 426, 825
BsiSI	CCGG	2 cut(s)	1738, 2261
BslFI	GGGAC	1 cut(s)	1078
BslI	CCNNNNNNNGG	6 cut(s)	11, 304, 1115, 1184, 1364, 2037
BsmAI	GTCTC	5 cut(s)	209, 1229, 1471, 2118, 2514
BsmBI	CGTCTC	1 cut(s)	209
BsmFI	GGGAC	1 cut(s)	1078
BsmI	GAATGC	2 cut(s)	839, 1373
BsnI	GGCC	4 cut(s)	419, 965, 2467, 2492
Bsp119I	TTCGAA	1 cut(s)	1377
Bsp1286I	GDGCHC	6 cut(s)	261, 426, 825, 1407, 1975, 2031
Bsp1407I	TGTACA	1 cut(s)	1195
Bsp19I	CCATGG	1 cut(s)	966
BspACI	CCGC	8 cut(s)	5, 298, 444, 545, 992, 1127, 1160, 2269
BspANI	GGCC	4 cut(s)	419, 965, 2467, 2492
BspCNI	CTCAG	1 cut(s)	517
BspDI	ATCGAT	1 cut(s)	2301
BspHI	TCATGA	1 cut(s)	1525
BspLI	GGNNCC	1 cut(s)	1799
BspMAI	CTGCAG	4 cut(s)	1183, 1702, 1750, 2161
BspMI	ACCTGC	3 cut(s)	276, 931, 1186
BspPI	GGATC	4 cut(s)	435, 1375, 1792, 1805
BspQI	GCTCTTC	1 cut(s)	926
BspT104I	TTCGAA	1 cut(s)	1377
BspTI	CTTAAG	1 cut(s)	1415
BsrDI	GCAATG	3 cut(s)	1057, 1396, 2544
BsrGI	TGTACA	1 cut(s)	1195
BsrI	ACTGG	3 cut(s)	1807, 1892, 2015
BssECI	CCNNGG	6 cut(s)	966, 1565, 1738, 1840, 2086, 2371
BssSI	CACGAG	1 cut(s)	260
BssT1I	CCWWGG	3 cut(s)	966, 1565, 2371
Bst2BI	CACGAG	1 cut(s)	260
Bst2UI	CCWGG	2 cut(s)	1842, 2038
Bst4CI	ACNGT	7 cut(s)	153, 271, 365, 381, 983, 1716, 2066
Bst6I	CTCTTC	4 cut(s)	695, 732, 915, 926
BstAFI	CTTAAG	1 cut(s)	1415
BstAPI	GCANNNNNTGC	1 cut(s)	611
BstAUI	TGTACA	1 cut(s)	1195
BstBI	TTCGAA	1 cut(s)	1377
BstC8I	GCNNGC	4 cut(s)	1359, 1440, 1444, 1708
BstDEI	CTNAG	6 cut(s)	281, 427, 525, 617, 840, 1470
BstDSI	CCRYGG	2 cut(s)	966, 2086
BstEII	GGTNACC	1 cut(s)	856
BstENI	CCTNNNNNAGG	1 cut(s)	1113
BstF5I	GGATG	5 cut(s)	907, 1168, 1198, 1523, 2117
BstH2I	RGCGCY	1 cut(s)	1746
BstHHI	GCGC	1 cut(s)	1745
BstMAI	GTCTC	5 cut(s)	209, 1229, 1471, 2118, 2514
BstMWI	GCNNNNNNNGC	5 cut(s)	306, 321, 547, 611, 1917
BstNI	CCWGG	2 cut(s)	1842, 2038
BstNSI	RCATGY	2 cut(s)	1446, 1710
BstPI	GGTNACC	1 cut(s)	856
BstSCI	CCNGG	4 cut(s)	1737, 1840, 2036, 2259
BstSFI	CTRYAG	6 cut(s)	862, 1179, 1698, 1746, 2157, 2184
BstSLI	GKGCMC	2 cut(s)	1975, 2031
BstV1I	GCAGC	7 cut(s)	528, 559, 617, 621, 1343, 1346, 1732
BstV2I	GAAGAC	3 cut(s)	101, 382, 1809
BstX2I	RGATCY	3 cut(s)	440, 1797, 2230
BstYI	RGATCY	3 cut(s)	440, 1797, 2230
Bsu15I	ATCGAT	1 cut(s)	2301
BsuRI	GGCC	4 cut(s)	419, 965, 2467, 2492
BsuTUI	ATCGAT	1 cut(s)	2301
BtgI	CCRYGG	2 cut(s)	966, 2086
BtgZI	GCGATG	1 cut(s)	1338
BtrI	CACGTC	1 cut(s)	1815
BtsCI	GGATG	5 cut(s)	907, 1168, 1198, 1523, 2117
BtsIMutI	CAGTG	3 cut(s)	642, 879, 1585
BveI	ACCTGC	3 cut(s)	276, 931, 1186
Cac8I	GCNNGC	4 cut(s)	1359, 1440, 1444, 1708
CaiI	CAGNNNCTG	3 cut(s)	64, 611, 1337
CciI	TCATGA	1 cut(s)	1525
CfoI	GCGC	1 cut(s)	1745
ClaI	ATCGAT	1 cut(s)	2301
CseI	GACGC	4 cut(s)	191, 925, 1712, 2171
Csp6I	GTAC	5 cut(s)	1028, 1130, 1196, 1451, 2180
CspCI	CAANNNNNGTGG	2 cut(s)	1921, 1956
CviAII	CATG	8 cut(s)	967, 1163, 1443, 1447, 1526, 1642, 1707, 1979
CviQI	GTAC	5 cut(s)	1028, 1130, 1196, 1451, 2180
DdeI	CTNAG	6 cut(s)	281, 427, 525, 617, 840, 1470
DraI	TTTAAA	3 cut(s)	33, 109, 682
EaeI	YGGCCR	1 cut(s)	417
Eam1104I	CTCTTC	4 cut(s)	695, 732, 915, 926
EarI	CTCTTC	4 cut(s)	695, 732, 915, 926
EciI	GGCGGA	1 cut(s)	433
Ecl136II	GAGCTC	3 cut(s)	259, 424, 823
Eco130I	CCWWGG	3 cut(s)	966, 1565, 2371
Eco24I	GRGCYC	4 cut(s)	261, 426, 825, 1407
Eco32I	GATATC	3 cut(s)	295, 744, 1789
Eco53kI	GAGCTC	3 cut(s)	259, 424, 823
Eco57I	CTGAAG	3 cut(s)	383, 666, 896
Eco91I	GGTNACC	1 cut(s)	856
EcoICRI	GAGCTC	3 cut(s)	259, 424, 823
EcoNI	CCTNNNNNAGG	1 cut(s)	1113
EcoO65I	GGTNACC	1 cut(s)	856
EcoRI	GAATTC	1 cut(s)	19
EcoRII	CCWGG	2 cut(s)	1840, 2036
EcoRV	GATATC	3 cut(s)	295, 744, 1789
EcoT14I	CCWWGG	3 cut(s)	966, 1565, 2371
EcoT22I	ATGCAT	2 cut(s)	1448, 1670
EcoT38I	GRGCYC	4 cut(s)	261, 426, 825, 1407
ErhI	CCWWGG	3 cut(s)	966, 1565, 2371
Esp3I	CGTCTC	1 cut(s)	209
FaeI	CATG	8 cut(s)	970, 1166, 1446, 1450, 1529, 1645, 1710, 1982
FalI	AAGNNNNNCTT	2 cut(s)	1904, 1936
FaqI	GGGAC	1 cut(s)	1078
FatI	CATG	8 cut(s)	966, 1162, 1442, 1446, 1525, 1641, 1706, 1978
FbaI	TGATCA	1 cut(s)	1150
FokI	GGATG	5 cut(s)	914, 1155, 1205, 1530, 2104
FriOI	GRGCYC	4 cut(s)	261, 426, 825, 1407
FspBI	CTAG	6 cut(s)	99, 140, 392, 479, 1566, 1802
GlaI	GCGC	1 cut(s)	1744
GsaI	CCCAGC	1 cut(s)	2357
HaeII	RGCGCY	1 cut(s)	1746
HaeIII	GGCC	4 cut(s)	419, 965, 2467, 2492
HapII	CCGG	2 cut(s)	1738, 2261
HgaI	GACGC	4 cut(s)	191, 925, 1712, 2171
HhaI	GCGC	1 cut(s)	1745
Hin1II	CATG	8 cut(s)	970, 1166, 1446, 1450, 1529, 1645, 1710, 1982
Hin6I	GCGC	1 cut(s)	1743
HinP1I	GCGC	1 cut(s)	1743
HincII	GTYRAC	1 cut(s)	1837
HindII	GTYRAC	1 cut(s)	1837
HpaII	CCGG	2 cut(s)	1738, 2261
HphI	GGTGA	4 cut(s)	107, 850, 1167, 2369
Hpy166II	GTNNAC	5 cut(s)	265, 1198, 1812, 1837, 2332
Hpy188I	TCNGA	9 cut(s)	514, 675, 915, 1081, 1495, 1756, 2061, 2283, 2552
Hpy188III	TCNNGA	8 cut(s)	262, 667, 1526, 1784, 1992, 2234, 2240, 2288
Hpy8I	GTNNAC	5 cut(s)	265, 1198, 1812, 1837, 2332
Hpy99I	CGWCG	1 cut(s)	1760
HpyAV	CCTTC	9 cut(s)	498, 593, 942, 1004, 1051, 1109, 1182, 1787, 1855
HpyCH4III	ACNGT	7 cut(s)	153, 271, 365, 381, 983, 1716, 2066
HpyCH4IV	ACGT	1 cut(s)	1814
HpyF10VI	GCNNNNNNNGC	5 cut(s)	306, 321, 547, 611, 1917
HpyF3I	CTNAG	6 cut(s)	281, 427, 525, 617, 840, 1470
HpySE526I	ACGT	1 cut(s)	1814
Hsp92II	CATG	8 cut(s)	970, 1166, 1446, 1450, 1529, 1645, 1710, 1982
HspAI	GCGC	1 cut(s)	1743
Ksp22I	TGATCA	1 cut(s)	1150
LguI	GCTCTTC	1 cut(s)	926
LmnI	GCTCC	3 cut(s)	613, 828, 2350
Lsp1109I	GCAGC	7 cut(s)	528, 559, 617, 621, 1343, 1346, 1732
LweI	GCATC	6 cut(s)	61, 126, 309, 1114, 1592, 1854
MaeI	CTAG	6 cut(s)	99, 140, 392, 479, 1566, 1802
MaeII	ACGT	1 cut(s)	1814
MaeIII	GTNAC	3 cut(s)	856, 1883, 2240
MfeI	CAATTG	2 cut(s)	310, 1154
MflI	RGATCY	3 cut(s)	440, 1797, 2230
MhlI	GDGCHC	6 cut(s)	261, 426, 825, 1407, 1975, 2031
MmeI	TCCRAC	9 cut(s)	22, 196, 1165, 1224, 1345, 1779, 2322, 2373, 2408
Mph1103I	ATGCAT	2 cut(s)	1448, 1670
MroXI	GAANNNNTTC	2 cut(s)	228, 909
MseI	TTAA	8 cut(s)	32, 78, 108, 351, 681, 1260, 1304, 1416
MslI	CAYNNNNRTG	1 cut(s)	1646
MspA1I	CMGCKG	2 cut(s)	634, 1337
MspCI	CTTAAG	1 cut(s)	1415
MspI	CCGG	2 cut(s)	1738, 2261
MspR9I	CCNGG	4 cut(s)	1739, 1842, 2038, 2261
MunI	CAATTG	2 cut(s)	310, 1154
Mva1269I	GAATGC	2 cut(s)	839, 1373
MvaI	CCWGG	2 cut(s)	1842, 2038
MwoI	GCNNNNNNNGC	5 cut(s)	306, 321, 547, 611, 1917
NciI	CCSGG	2 cut(s)	1739, 2261
NcoI	CCATGG	1 cut(s)	966
NlaIII	CATG	8 cut(s)	970, 1166, 1446, 1450, 1529, 1645, 1710, 1982
NlaIV	GGNNCC	1 cut(s)	1799
NmeAIII	GCCGAG	1 cut(s)	445
NmuCI	GTSAC	3 cut(s)	856, 1883, 2240
NsiI	ATGCAT	2 cut(s)	1448, 1670
NspI	RCATGY	2 cut(s)	1446, 1710
NspV	TTCGAA	1 cut(s)	1377
PaeI	GCATGC	2 cut(s)	1446, 1710
PagI	TCATGA	1 cut(s)	1525
PaqCI	CACCTGC	3 cut(s)	276, 931, 1186
PciSI	GCTCTTC	1 cut(s)	926
PcsI	WCGNNNNNNNCGW	1 cut(s)	219
PctI	GAATGC	2 cut(s)	839, 1373
PdmI	GAANNNNTTC	2 cut(s)	228, 909
PflFI	GACNNNGTC	1 cut(s)	1268
PflMI	CCANNNNNTGG	1 cut(s)	1364
PsiI	TTATAA	3 cut(s)	189, 653, 2130
Psp124BI	GAGCTC	3 cut(s)	261, 426, 825
Psp6I	CCWGG	2 cut(s)	1840, 2036
PspEI	GGTNACC	1 cut(s)	856
PspFI	CCCAGC	1 cut(s)	2353
PspGI	CCWGG	2 cut(s)	1840, 2036
PspN4I	GGNNCC	1 cut(s)	1799
PstI	CTGCAG	4 cut(s)	1183, 1702, 1750, 2161
PstNI	CAGNNNCTG	3 cut(s)	64, 611, 1337
PsuI	RGATCY	3 cut(s)	440, 1797, 2230
PsyI	GACNNNGTC	1 cut(s)	1268
PvuII	CAGCTG	2 cut(s)	634, 1337
RsaI	GTAC	5 cut(s)	1029, 1131, 1197, 1452, 2181
RsaNI	GTAC	5 cut(s)	1028, 1130, 1196, 1451, 2180
RseI	CAYNNNNRTG	1 cut(s)	1646
SacI	GAGCTC	3 cut(s)	261, 426, 825
SapI	GCTCTTC	1 cut(s)	926
SaqAI	TTAA	8 cut(s)	32, 78, 108, 351, 681, 1260, 1304, 1416
ScrFI	CCNGG	4 cut(s)	1739, 1842, 2038, 2261
SduI	GDGCHC	6 cut(s)	261, 426, 825, 1407, 1975, 2031
SfaNI	GCATC	6 cut(s)	61, 126, 309, 1114, 1592, 1854
SfcI	CTRYAG	6 cut(s)	862, 1179, 1698, 1746, 2157, 2184
SfuI	TTCGAA	1 cut(s)	1377
SmiMI	CAYNNNNRTG	1 cut(s)	1646
SmlI	CTYRAG	1 cut(s)	1415
SmoI	CTYRAG	1 cut(s)	1415
SphI	GCATGC	2 cut(s)	1446, 1710
SsiI	CCGC	8 cut(s)	5, 298, 444, 545, 992, 1127, 1160, 2269
SspI	AATATT	2 cut(s)	370, 2483
SspMI	CTAG	6 cut(s)	99, 140, 392, 479, 1566, 1802
SstI	GAGCTC	3 cut(s)	261, 426, 825
StyD4I	CCNGG	4 cut(s)	1737, 1840, 2036, 2259
StyI	CCWWGG	3 cut(s)	966, 1565, 2371
TaaI	ACNGT	7 cut(s)	153, 271, 365, 381, 983, 1716, 2066
TaiI	ACGT	1 cut(s)	1817
TaqI	TCGA	8 cut(s)	222, 1377, 1597, 1721, 1875, 1902, 2176, 2301
TatI	WGTACW	1 cut(s)	1195
TauI	GCSGC	4 cut(s)	7, 547, 995, 1162
Tru1I	TTAA	8 cut(s)	32, 78, 108, 351, 681, 1260, 1304, 1416
Tru9I	TTAA	8 cut(s)	32, 78, 108, 351, 681, 1260, 1304, 1416
TscAI	CASTG	3 cut(s)	649, 886, 1585
TseFI	GTSAC	3 cut(s)	856, 1883, 2240
TseI	GCWGC	7 cut(s)	541, 547, 605, 634, 1331, 1334, 1745
Tsp45I	GTSAC	3 cut(s)	856, 1883, 2240
TspGWI	ACGGA	3 cut(s)	190, 1773, 2075
TspRI	CASTG	3 cut(s)	649, 886, 1585
Tth111I	GACNNNGTC	1 cut(s)	1268
Van91I	CCANNNNNTGG	1 cut(s)	1364
Vha464I	CTTAAG	1 cut(s)	1415
XagI	CCTNNNNNAGG	1 cut(s)	1113
XapI	RAATTY	6 cut(s)	19, 111, 790, 888, 895, 1771
XceI	RCATGY	2 cut(s)	1446, 1710
XmaJI	CCTAGG	1 cut(s)	1565
XmnI	GAANNNNTTC	2 cut(s)	228, 909
XspI	CTAG	6 cut(s)	99, 140, 392, 479, 1566, 1802
Zsp2I	ATGCAT	2 cut(s)	1448, 1670

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.