Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0002622

Physical Location & Seq

Genomic Coordinates Reverse (-)

334148 .. 340601

Gene Structure 6454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005618

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGTTGAGTGGTGGTGGCTCTCGTCTCTCGAATCACCTACGTCTGCGAGACTGCGACCTCCGCCACCGCCACCGCCACCGCCACCAACCCCAACTTGGTTTTGGGTTCGTCTTTGGCTTTGAATTGGGTACTCGAATCGCTGGGCTACGAGTACGACGCTCTCTCAAACCCTTGTCTGCTCGTAGAATCTCGTCTTTCCGCTCTATCATTCATTCCAAGTCTCCCCCCGACATTCCTACACTCTCCCACTGTTTCAGCCAACGAGAAGACGGACGCGAGCTTCCCTCCGACGTATTGTCCTCAGTCGCAGGAGGAATAGTTGCACTGGGAAAATTCGATGCCCTTCATATTGGCCATCGAGAGCTTGCCATTCAAGCCTCAAAGGTTGGACCTCCATTTCTTTTATCGTTTGTTGGAATGGCAGAAGTACTGGGTTGGGAACCTAGGGCTCCAATAGTTGCCAAATGTGATCGAAAGCGGGTTCTTTCTACTTGGGCTCCATATTGTGGTAACATGGTCCCTGCAGAGTTTGAAATTCAATTTTCAAGTGTTCGACAACTCACTCCACGGGAATTTGTTGAAAAGTTATTGAAAGAGTTTGGAGTTCGTGGGGTTGTGGCGGGTGAAAACTACCGATTTGGATATAAAGCAGCTGGTGATGCGAGAGAGCTGGTGAAGTTGTGTGAAGAATACGGTATGGGGGCTTACATCATAAAATCTGTTATGGACAAGAACCAACACTCGATCAGCACGAACTCAGATTCAAAAGACAGAGGACAAGTTTCATCTACTCGTGTTCGCCGCGCCCTTGCTGTAGGAGATATGAAGTATGTGTCTCAACTTTTGGGTCGCCAACACCGTGTGATATTGATTGCAAAGGAGCAGGAAGGTTTCCGTTGGAGCAGACATAAATTGTCAGTTCCAAAGTCGTGTATGTTAAATTTAGGTCCAAAAGAGGGTCTATATGGGAAGTGTGATCTCTTAATTGGTGATGGAGGAGGCGACCTAGTAGTGCCATGTAGTGTAGTAATTGACACAGCATATATCCACATAGAAATGGATGATGTAGAAATTAGAAGAGTCCAACGCAACGCAAGGGAACCCAGCCAGAGGGCAGTTTGCTTACTTGCTTGCTTTCCCAATCTCTCTTCTTCTTTCTTTCTTCCATTATTATGTTTATATTGGCATAAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGAGATTAAGATTTTCATCATGGGTTCCTTGTCTGGAATCCTTCAACGCCCTCTAATCGCTGCCGCCGCTGTTGGCTTTGCTTCTTTTTCTTCTGACTTCTCTCTCATACTGCCCTCTCACAAATCCAACCACGACTCCTCCTCCTCCTCGGATTTATCAACTTCAACAACTTCTTTGTCGTCACACATTTCGCTTTCTAAGCTTGCAAACCTCTCCTTTATCTCCAGAATTCAAGTACCTGTTCCCACCATTAACTTCCCAATTCCCAATTCCCACTGCAATTCCCTCTATTCTTCGGTTGCATCTTCCCCCGCTCTTCTTAAGCTCTATCACTCTGCACACTTGGCCAGAGCGCCGCCCAACCCAACTCCATATAAAAAACATGATACATCATCTGCTTCCATCCCTGACGTCTCCTACAGATGGCATTTGCCTCAGCCAAATGCTCTTGATGTTTCCGGCACCTCTGATTGTTCATCTGCAAAGATGAGGACTCTGGTCGTTTTGCTGGGATGGTTAGGAGCAAAGCAAAAGCATCTCAAGAGGTATGCCGACTGGTATACTTCCCAGGGGTTTCACGTCATTACCTTTACTTTACCCATGGCTGACATTCTCAAATACCAGCCTGGTGGTAAAGTCGAAGACCACATTGACCTGCTTGTCACTCATTTGGCTGATTGGTTAGAAGAGGAGCAGGGAAAGAACCTGCTTTTTCATACTTTTAGCAACACTGGATGGCTAACGTATGGTGTAATGTTGGAGAAGTTCCAGAAGCACGATCCTTCTGTAATGGGCAGGATTCGGGGCTGCGTGGTGGATTCCGCCCCTGTTGCAGCACCTGACCCGCAGGTCTGGGCTTCTGGTTTCTCTGCAGCCTTTCTGAAAAAGCACAGTGTAGCAACGAAAGGAACCACAGATGCTAGTGAGTCAGGGATGGATGCGTTGGTTGACAGCAAGGAAGTAGTGGCACCCAAACCTGCAGTAACTGAGGCAGCTTTGCTTTTAGTTTTGGAGAAGTTCTTTGAGGTGGTTTTGAATCTCCCTACAGTGAACAGGAGGCTTTCTGATGTTTTGGGCTTACTGTCAGCACGACAACCAAGCTGTCCGCAATTATATATCTACAGCTCTGCAGACAGAGTCATTCCTGCAGGATCTGTGGAGTCATTCATAAAACAACAGCGGAGGGCTGGACATGAGGTTAGGGCATGCAACTTTGTCTCGACACCTCATGTTGATCATTTCAGAAATGACCCGAAGCTGTATACTTCTGAGCTAACTCACTTTCTGGAGGACTGTGTGCTTACTAGTTGCAAACAGTCTCATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF829

Protein Analysis

850

Amino Acids

94.11

Weight (kDa)

9.21

Isoelectric Point (pI)

45.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAD_syn	PF06574	104 - 251	1.8e-15	FAD synthetase
DUF829	PF05705	573 - 837	6.9e-70	Eukaryotic protein of unknown function (DUF829)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19970 AT3G19970 AT3G19970 AT3G19970 AT3G19970
fragaria_vesca	FvH4_4g37150 FvH4_7g21480
malus_domestica	MD13G1003100.v1.1
prunus_persica	Prupe.1G349300_v2.0.a1
pyrus_communis	pycom13g00260 pycom16g00170
rosa_chinensis	RchiOBHm_Chr1g0365791 RchiOBHm_Chr4g0409441 RchiOBHm_Chr4g0446951
rosa_laevigata	RLG00000005618 RLG00000027396
rosa_multiflora	Rmu_co8345695.1_g000001 Rmu_sc0001753.1_g000006 Rmu_sc0002365.1_g000009 Rmu_sc0004311.1_g000013 Rmu_sc0011539.1_g000002 Rmu_sc0034955.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290870 Rroxscaffold_5G00387280
rosa_rugosa	Rorug01G0324300 Rorug03G0341000 Rorug03G0341000 Rorug04G0376500
rosa_samantha	Rh1AG333200 Rh1BG294100 Rh1CG310800 Rh1DG326500 Rh4AG437900 Rh4BG446800 Rh4CG464100 Rh4DG445600
rosa_wichuraiana	Rw0G014000 Rw1G006220 Rw1G029570 Rw4G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1883, 2072
AatII	GACGTC	1 cut(s)	1638
Acc36I	ACCTGC	4 cut(s)	1887, 1938, 2062, 2209
AccB1I	GGYRCC	2 cut(s)	1685, 2191
AccB7I	CCANNNNNTGG	1 cut(s)	506
AccBSI	CCGCTC	2 cut(s)	201, 1538
AccI	GTMKAC	2 cut(s)	1784, 2486
AccII	CGCG	2 cut(s)	276, 804
AclWI	GGATC	2 cut(s)	1997, 2383
AcoI	YGGCCR	2 cut(s)	352, 1569
AcsI	RAATTY	5 cut(s)	332, 534, 572, 940, 1452
AcyI	GRCGYC	1 cut(s)	1635
AdeI	CACNNNGTG	1 cut(s)	862
AfaI	GTAC	4 cut(s)	130, 153, 429, 1461
AfiI	CCNNNNNNNGG	5 cut(s)	95, 506, 956, 1110, 1647
AflII	CTTAAG	1 cut(s)	1544
AhdI	GACNNNNNGTC	1 cut(s)	295
AhlI	ACTAGT	1 cut(s)	2528
AjiI	CACGTC	1 cut(s)	1804
AjnI	CCWGG	2 cut(s)	1791, 1849
AjuI	GAANNNNNNNTTGG	2 cut(s)	1477, 1509
Alw26I	GTCTC	6 cut(s)	29, 42, 225, 840, 1642, 2446
AlwI	GGATC	2 cut(s)	1997, 2383
AlwNI	CAGNNNCTG	3 cut(s)	2063, 2210, 2378
AoxI	GGCC	2 cut(s)	352, 1569
ApeKI	GCWGC	6 cut(s)	650, 1283, 2031, 2057, 2096, 2216
ApoI	RAATTY	5 cut(s)	332, 534, 572, 940, 1452
AspA2I	CCTAGG	1 cut(s)	443
AspLEI	GCGC	2 cut(s)	806, 1579
AspS9I	GGNCC	3 cut(s)	389, 517, 947
AsuHPI	GGTGA	5 cut(s)	26, 635, 668, 685, 1001
AvaII	GGWCC	3 cut(s)	389, 517, 947
AvrII	CCTAGG	1 cut(s)	443
BalI	TGGCCA	2 cut(s)	354, 1571
BanI	GGYRCC	2 cut(s)	1685, 2191
BanII	GRGCYC	2 cut(s)	451, 499
BauI	CACGAG	1 cut(s)	792
BbsI	GAAGAC	2 cut(s)	273, 1872
BbvCI	CCTCAGC	1 cut(s)	1659
BbvI	GCAGC	6 cut(s)	662, 1270, 2018, 2069, 2108, 2228
BccI	CCATC	7 cut(s)	363, 986, 1634, 1641, 1731, 1953, 2152
BciT130I	CCWGG	2 cut(s)	1793, 1851
BclI	TGATCA	1 cut(s)	2458
BcoDI	GTCTC	6 cut(s)	29, 42, 225, 840, 1642, 2446
BcuI	ACTAGT	1 cut(s)	2528
BfaI	CTAG	4 cut(s)	444, 1007, 2145, 2529
BfmI	CTRYAG	9 cut(s)	522, 813, 1642, 2094, 2202, 2268, 2344, 2352, 2370
BfoI	RGCGCY	1 cut(s)	1580
BfrI	CTTAAG	1 cut(s)	1544
BfuAI	ACCTGC	4 cut(s)	1887, 1938, 2062, 2209
BlnI	CCTAGG	1 cut(s)	443
BmcAI	AGTACT	1 cut(s)	429
Bme1390I	CCNGG	2 cut(s)	1793, 1851
Bme18I	GGWCC	3 cut(s)	389, 517, 947
BmeRI	GACNNNNNGTC	1 cut(s)	295
BmgBI	CACGTC	1 cut(s)	1804
BmgT120I	GGNCC	3 cut(s)	389, 517, 947
BmiI	GGNNCC	9 cut(s)	441, 450, 498, 519, 1101, 1249, 1687, 2134, 2193
BmrFI	CCNGG	2 cut(s)	1793, 1851
BmrI	ACTGGG	2 cut(s)	335, 440
BmsI	GCATC	6 cut(s)	328, 649, 1535, 1768, 2131, 2152
BmuI	ACTGGG	2 cut(s)	335, 440
BoxI	GACNNNNGTC	1 cut(s)	1721
BpiI	GAAGAC	2 cut(s)	273, 1872
BplI	GAGNNNNNCTC	2 cut(s)	269, 301
BpmI	CTGGAG	2 cut(s)	1432, 2531
Bpu10I	CCTNAGC	1 cut(s)	1659
BpuEI	CTTGAG	1 cut(s)	1748
BsaBI	GATNNNNATC	1 cut(s)	1238
BsaHI	GRCGYC	1 cut(s)	1635
BsaJI	CCNNGG	6 cut(s)	443, 566, 1371, 1791, 1792, 1824
Bsc4I	CCNNNNNNNGG	5 cut(s)	95, 506, 956, 1110, 1647
Bse1I	ACTGG	4 cut(s)	330, 435, 1784, 1960
Bse8I	GATNNNNATC	1 cut(s)	1238
BseBI	CCWGG	2 cut(s)	1793, 1851
BseDI	CCNNGG	6 cut(s)	443, 566, 1371, 1791, 1792, 1824
BseGI	GGATG	6 cut(s)	1066, 1626, 1742, 1964, 2163, 2167
BseJI	GATNNNNATC	1 cut(s)	1238
BseLI	CCNNNNNNNGG	5 cut(s)	95, 506, 956, 1110, 1647
BseMII	CTCAG	5 cut(s)	315, 771, 1673, 2202, 2484
BseNI	ACTGG	4 cut(s)	330, 435, 1784, 1960
BseRI	GAGGAG	6 cut(s)	1011, 1351, 1354, 1357, 1360, 1928
BseXI	GCAGC	6 cut(s)	662, 1270, 2018, 2069, 2108, 2228
BseYI	CCCAGC	3 cut(s)	140, 1103, 1732
BsgI	GTGCAG	1 cut(s)	1545
Bsh1236I	CGCG	2 cut(s)	276, 804
BshFI	GGCC	2 cut(s)	354, 1571
BshNI	GGYRCC	2 cut(s)	1685, 2191
BsiSI	CCGG	1 cut(s)	1683
BslFI	GGGAC	1 cut(s)	503
BslI	CCNNNNNNNGG	5 cut(s)	95, 506, 956, 1110, 1647
BsmAI	GTCTC	6 cut(s)	29, 42, 225, 840, 1642, 2446
BsmBI	CGTCTC	2 cut(s)	29, 1642
BsmFI	GGGAC	1 cut(s)	503
BsnI	GGCC	2 cut(s)	354, 1571
Bsp1286I	GDGCHC	2 cut(s)	451, 499
Bsp143I	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
Bsp19I	CCATGG	1 cut(s)	1824
BspANI	GGCC	2 cut(s)	354, 1571
BspCNI	CTCAG	5 cut(s)	314, 770, 1672, 2203, 2485
BspFNI	CGCG	2 cut(s)	276, 804
BspLI	GGNNCC	9 cut(s)	441, 450, 498, 519, 1101, 1249, 1687, 2134, 2193
BspMAI	CTGCAG	5 cut(s)	526, 2098, 2206, 2356, 2374
BspMI	ACCTGC	4 cut(s)	1887, 1938, 2062, 2209
BspPI	GGATC	2 cut(s)	1997, 2383
BspQI	GCTCTTC	1 cut(s)	1545
BspT107I	GGYRCC	2 cut(s)	1685, 2191
BspTI	CTTAAG	1 cut(s)	1544
BsrBI	CCGCTC	2 cut(s)	201, 1538
BsrI	ACTGG	4 cut(s)	330, 435, 1784, 1960
BssECI	CCNNGG	6 cut(s)	443, 566, 1371, 1791, 1792, 1824
BssMI	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
BssNAI	GTATAC	2 cut(s)	1785, 2487
BssNI	GRCGYC	1 cut(s)	1635
BssSI	CACGAG	1 cut(s)	792
BssT1I	CCWWGG	2 cut(s)	443, 1824
Bst1107I	GTATAC	2 cut(s)	1785, 2487
Bst2BI	CACGAG	1 cut(s)	792
Bst2UI	CCWGG	2 cut(s)	1793, 1851
Bst4CI	ACNGT	8 cut(s)	251, 695, 860, 2117, 2272, 2307, 2519, 2541
Bst6I	CTCTTC	4 cut(s)	1072, 1153, 1545, 1905
BstACI	GRCGYC	1 cut(s)	1635
BstAFI	CTTAAG	1 cut(s)	1544
BstC8I	GCNNGC	5 cut(s)	278, 366, 1132, 1428, 2431
BstDEI	CTNAG	6 cut(s)	301, 757, 1422, 1659, 2211, 2493
BstDSI	CCRYGG	2 cut(s)	566, 1824
BstF5I	GGATG	6 cut(s)	1066, 1626, 1742, 1964, 2163, 2167
BstFNI	CGCG	2 cut(s)	276, 804
BstH2I	RGCGCY	1 cut(s)	1580
BstHHI	GCGC	2 cut(s)	806, 1579
BstKTI	GATC	6 cut(s)	472, 747, 979, 2005, 2378, 2461
BstMAI	GTCTC	6 cut(s)	29, 42, 225, 840, 1642, 2446
BstMBI	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
BstMWI	GCNNNNNNNGC	7 cut(s)	60, 374, 659, 1289, 1423, 1568, 2054
BstNI	CCWGG	2 cut(s)	1793, 1851
BstNSI	RCATGY	1 cut(s)	2433
BstPAI	GACNNNNGTC	1 cut(s)	1721
BstSCI	CCNGG	2 cut(s)	1791, 1849
BstSFI	CTRYAG	9 cut(s)	522, 813, 1642, 2094, 2202, 2268, 2344, 2352, 2370
BstUI	CGCG	2 cut(s)	276, 804
BstV1I	GCAGC	6 cut(s)	662, 1270, 2018, 2069, 2108, 2228
BstV2I	GAAGAC	2 cut(s)	273, 1872
BstX2I	RGATCY	1 cut(s)	2375
BstXI	CCANNNNNNTGG	1 cut(s)	1853
BstYI	RGATCY	1 cut(s)	2375
BstZ17I	GTATAC	2 cut(s)	1785, 2487
BsuRI	GGCC	2 cut(s)	354, 1571
BtgI	CCRYGG	2 cut(s)	566, 1824
BtrI	CACGTC	1 cut(s)	1804
BtsCI	GGATG	6 cut(s)	1066, 1626, 1742, 1964, 2163, 2167
BtsI	GCAGTG	1 cut(s)	1498
BtsIMutI	CAGTG	6 cut(s)	247, 323, 1498, 1953, 2122, 2277
BveI	ACCTGC	4 cut(s)	1887, 1938, 2062, 2209
Cac8I	GCNNGC	5 cut(s)	278, 366, 1132, 1428, 2431
CaiI	CAGNNNCTG	3 cut(s)	2063, 2210, 2378
CfoI	GCGC	2 cut(s)	806, 1579
Cfr13I	GGNCC	3 cut(s)	389, 517, 947
CseI	GACGC	2 cut(s)	165, 282
Csp6I	GTAC	4 cut(s)	129, 152, 428, 1460
CviAII	CATG	8 cut(s)	514, 1017, 1243, 1607, 1825, 2417, 2430, 2453
CviQI	GTAC	4 cut(s)	129, 152, 428, 1460
DdeI	CTNAG	6 cut(s)	301, 757, 1422, 1659, 2211, 2493
DpnI	GATC	6 cut(s)	471, 746, 978, 2004, 2377, 2460
DpnII	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
DraIII	CACNNNGTG	1 cut(s)	862
DrdI	GACNNNNNNGTC	2 cut(s)	1883, 2072
DriI	GACNNNNNGTC	1 cut(s)	295
DseDI	GACNNNNNNGTC	2 cut(s)	1883, 2072
EaeI	YGGCCR	2 cut(s)	352, 1569
Eam1104I	CTCTTC	4 cut(s)	1072, 1153, 1545, 1905
Eam1105I	GACNNNNNGTC	1 cut(s)	295
EarI	CTCTTC	4 cut(s)	1072, 1153, 1545, 1905
EciI	GGCGGA	2 cut(s)	50, 2035
Eco130I	CCWWGG	2 cut(s)	443, 1824
Eco24I	GRGCYC	2 cut(s)	451, 499
Eco47I	GGWCC	3 cut(s)	389, 517, 947
EcoRI	GAATTC	1 cut(s)	1452
EcoRII	CCWGG	2 cut(s)	1791, 1849
EcoT14I	CCWWGG	2 cut(s)	443, 1824
EcoT38I	GRGCYC	2 cut(s)	451, 499
ErhI	CCWWGG	2 cut(s)	443, 1824
Esp3I	CGTCTC	2 cut(s)	29, 1642
FaeI	CATG	8 cut(s)	517, 1020, 1246, 1610, 1828, 2420, 2433, 2456
FaqI	GGGAC	1 cut(s)	503
FatI	CATG	8 cut(s)	513, 1016, 1242, 1606, 1824, 2416, 2429, 2452
FauI	CCCGC	4 cut(s)	471, 613, 1543, 2076
FbaI	TGATCA	1 cut(s)	2458
FblI	GTMKAC	2 cut(s)	1784, 2486
FokI	GGATG	6 cut(s)	1073, 1613, 1749, 1971, 2170, 2174
FriOI	GRGCYC	2 cut(s)	451, 499
FspBI	CTAG	4 cut(s)	444, 1007, 2145, 2529
GlaI	GCGC	2 cut(s)	805, 1578
GsaI	CCCAGC	3 cut(s)	144, 1107, 1736
GsuI	CTGGAG	2 cut(s)	1432, 2531
HaeII	RGCGCY	1 cut(s)	1580
HaeIII	GGCC	2 cut(s)	354, 1571
HapII	CCGG	1 cut(s)	1683
HgaI	GACGC	2 cut(s)	165, 282
HhaI	GCGC	2 cut(s)	806, 1579
Hin1I	GRCGYC	1 cut(s)	1635
Hin1II	CATG	8 cut(s)	517, 1020, 1246, 1610, 1828, 2420, 2433, 2456
Hin6I	GCGC	2 cut(s)	804, 1577
HinP1I	GCGC	2 cut(s)	804, 1577
HincII	GTYRAC	1 cut(s)	2173
HindII	GTYRAC	1 cut(s)	2173
HindIII	AAGCTT	1 cut(s)	1424
HpaII	CCGG	1 cut(s)	1683
HphI	GGTGA	5 cut(s)	26, 635, 668, 685, 1001
Hpy166II	GTNNAC	4 cut(s)	1785, 2173, 2275, 2487
Hpy188I	TCNGA	9 cut(s)	289, 760, 1318, 1375, 1693, 2106, 2290, 2468, 2494
Hpy188III	TCNNGA	9 cut(s)	28, 359, 1257, 1449, 1673, 1765, 1993, 2443, 2510
Hpy8I	GTNNAC	4 cut(s)	1785, 2173, 2275, 2487
Hpy99I	CGWCG	2 cut(s)	159, 293
HpyAV	CCTTC	9 cut(s)	353, 881, 1186, 1192, 1198, 1204, 1210, 1274, 2016
HpyCH4III	ACNGT	8 cut(s)	251, 695, 860, 2117, 2272, 2307, 2519, 2541
HpyCH4IV	ACGT	5 cut(s)	40, 291, 1635, 1803, 1967
HpyF10VI	GCNNNNNNNGC	7 cut(s)	60, 374, 659, 1289, 1423, 1568, 2054
HpyF3I	CTNAG	6 cut(s)	301, 757, 1422, 1659, 2211, 2493
HpySE526I	ACGT	5 cut(s)	40, 291, 1635, 1803, 1967
Hsp92I	GRCGYC	1 cut(s)	1635
Hsp92II	CATG	8 cut(s)	517, 1020, 1246, 1610, 1828, 2420, 2433, 2456
HspAI	GCGC	2 cut(s)	804, 1577
Ksp22I	TGATCA	1 cut(s)	2458
Kzo9I	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
LguI	GCTCTTC	1 cut(s)	1545
LmnI	GCTCC	6 cut(s)	454, 502, 880, 900, 1745, 1915
Lsp1109I	GCAGC	6 cut(s)	662, 1270, 2018, 2069, 2108, 2228
LweI	GCATC	6 cut(s)	328, 649, 1535, 1768, 2131, 2152
MaeI	CTAG	4 cut(s)	444, 1007, 2145, 2529
MaeII	ACGT	5 cut(s)	40, 291, 1635, 1803, 1967
MaeIII	GTNAC	4 cut(s)	509, 1404, 1885, 2206
MalI	GATC	6 cut(s)	471, 746, 978, 2004, 2377, 2460
MbiI	CCGCTC	2 cut(s)	201, 1538
MboI	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
MflI	RGATCY	1 cut(s)	2375
MhlI	GDGCHC	2 cut(s)	451, 499
MlsI	TGGCCA	2 cut(s)	354, 1571
MluNI	TGGCCA	2 cut(s)	354, 1571
MlyI	GAGTC	6 cut(s)	1089, 1352, 1711, 2159, 2370, 2393
MmeI	TCCRAC	7 cut(s)	312, 367, 394, 878, 1108, 1374, 1962
Mox20I	TGGCCA	2 cut(s)	354, 1571
MscI	TGGCCA	2 cut(s)	354, 1571
MseI	TTAA	6 cut(s)	938, 983, 1230, 1476, 1545, 2548
MslI	CAYNNNNRTG	2 cut(s)	1055, 1171
Msp20I	TGGCCA	2 cut(s)	354, 1571
MspA1I	CMGCKG	3 cut(s)	653, 1292, 2404
MspCI	CTTAAG	1 cut(s)	1544
MspI	CCGG	1 cut(s)	1683
MspR9I	CCNGG	2 cut(s)	1793, 1851
MvaI	CCWGG	2 cut(s)	1793, 1851
MvnI	CGCG	2 cut(s)	276, 804
MwoI	GCNNNNNNNGC	7 cut(s)	60, 374, 659, 1289, 1423, 1568, 2054
NcoI	CCATGG	1 cut(s)	1824
NdeII	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
NlaIII	CATG	8 cut(s)	517, 1020, 1246, 1610, 1828, 2420, 2433, 2456
NlaIV	GGNNCC	9 cut(s)	441, 450, 498, 519, 1101, 1249, 1687, 2134, 2193
NmuCI	GTSAC	2 cut(s)	1404, 1885
NspI	RCATGY	1 cut(s)	2433
PaeI	GCATGC	1 cut(s)	2433
PasI	CCCWGGG	1 cut(s)	1792
PciSI	GCTCTTC	1 cut(s)	1545
PcsI	WCGNNNNNNNCGW	2 cut(s)	749, 856
PfeI	GAWTC	8 cut(s)	31, 135, 186, 761, 1260, 2023, 2042, 2260
PflFI	GACNNNGTC	1 cut(s)	2360
PflMI	CCANNNNNTGG	1 cut(s)	506
PleI	GAGTC	6 cut(s)	1088, 1352, 1711, 2158, 2369, 2392
PpsI	GAGTC	6 cut(s)	1088, 1352, 1711, 2158, 2369, 2392
PshAI	GACNNNNGTC	1 cut(s)	1721
Psp6I	CCWGG	2 cut(s)	1791, 1849
PspFI	CCCAGC	3 cut(s)	140, 1103, 1732
PspGI	CCWGG	2 cut(s)	1791, 1849
PspN4I	GGNNCC	9 cut(s)	441, 450, 498, 519, 1101, 1249, 1687, 2134, 2193
PspPI	GGNCC	3 cut(s)	389, 517, 947
PstI	CTGCAG	5 cut(s)	526, 2098, 2206, 2356, 2374
PstNI	CAGNNNCTG	3 cut(s)	2063, 2210, 2378
PsuI	RGATCY	1 cut(s)	2375
PsyI	GACNNNGTC	1 cut(s)	2360
PvuII	CAGCTG	1 cut(s)	653
RsaI	GTAC	4 cut(s)	130, 153, 429, 1461
RsaNI	GTAC	4 cut(s)	129, 152, 428, 1460
RseI	CAYNNNNRTG	2 cut(s)	1055, 1171
SapI	GCTCTTC	1 cut(s)	1545
SaqAI	TTAA	6 cut(s)	938, 983, 1230, 1476, 1545, 2548
Sau3AI	GATC	6 cut(s)	469, 744, 976, 2002, 2375, 2458
Sau96I	GGNCC	3 cut(s)	389, 517, 947
SbfI	CCTGCAGG	1 cut(s)	2374
ScaI	AGTACT	1 cut(s)	429
SchI	GAGTC	6 cut(s)	1089, 1352, 1711, 2159, 2370, 2393
ScrFI	CCNGG	2 cut(s)	1793, 1851
SdaI	CCTGCAGG	1 cut(s)	2374
SduI	GDGCHC	2 cut(s)	451, 499
SfaNI	GCATC	6 cut(s)	328, 649, 1535, 1768, 2131, 2152
SfcI	CTRYAG	9 cut(s)	522, 813, 1642, 2094, 2202, 2268, 2344, 2352, 2370
SinI	GGWCC	3 cut(s)	389, 517, 947
SmiMI	CAYNNNNRTG	2 cut(s)	1055, 1171
SmlI	CTYRAG	2 cut(s)	1544, 1763
SmoI	CTYRAG	2 cut(s)	1544, 1763
SpeI	ACTAGT	1 cut(s)	2528
SphI	GCATGC	1 cut(s)	2433
Sse8387I	CCTGCAGG	1 cut(s)	2374
SspMI	CTAG	4 cut(s)	444, 1007, 2145, 2529
StyD4I	CCNGG	2 cut(s)	1791, 1849
StyI	CCWWGG	2 cut(s)	443, 1824
TaaI	ACNGT	8 cut(s)	251, 695, 860, 2117, 2272, 2307, 2519, 2541
TaiI	ACGT	5 cut(s)	43, 294, 1638, 1806, 1970
TaqI	TCGA	9 cut(s)	29, 133, 336, 358, 472, 553, 743, 1863, 2444
TatI	WGTACW	1 cut(s)	427
TauI	GCSGC	4 cut(s)	804, 1289, 1292, 1582
TfiI	GAWTC	8 cut(s)	31, 135, 186, 761, 1260, 2023, 2042, 2260
Tru1I	TTAA	6 cut(s)	938, 983, 1230, 1476, 1545, 2548
Tru9I	TTAA	6 cut(s)	938, 983, 1230, 1476, 1545, 2548
TscAI	CASTG	6 cut(s)	254, 330, 1505, 1960, 2122, 2277
TseFI	GTSAC	2 cut(s)	1404, 1885
TseI	GCWGC	6 cut(s)	650, 1283, 2031, 2057, 2096, 2216
Tsp45I	GTSAC	2 cut(s)	1404, 1885
TspDTI	ATGAA	8 cut(s)	200, 335, 774, 839, 1228, 1689, 1928, 2380
TspGWI	ACGGA	2 cut(s)	285, 884
TspRI	CASTG	6 cut(s)	254, 330, 1505, 1960, 2122, 2277
Tth111I	GACNNNGTC	1 cut(s)	2360
Van91I	CCANNNNNTGG	1 cut(s)	506
Vha464I	CTTAAG	1 cut(s)	1544
VpaK11BI	GGWCC	3 cut(s)	389, 517, 947
XapI	RAATTY	5 cut(s)	332, 534, 572, 940, 1452
XceI	RCATGY	1 cut(s)	2433
XcmI	CCANNNNNNNNNTGG	2 cut(s)	92, 98
XmaJI	CCTAGG	1 cut(s)	443
XmiI	GTMKAC	2 cut(s)	1784, 2486
XspI	CTAG	4 cut(s)	444, 1007, 2145, 2529
ZraI	GACGTC	1 cut(s)	1636
ZrmI	AGTACT	1 cut(s)	429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.