Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011539.1

Orthogroup ID

OG0002622

Physical Location & Seq

Genomic Coordinates Reverse (-)

1460 .. 7492

Gene Structure 6033 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011539.1_g000002.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2211 bp

atgttgagcggtggtggctctcgtctctcgaatcacctacgtcagcgagactgcgacctccgccgccaccaccaccaccaaccccaacttggttttgggttcgtctttggctttggattgggtactcgaatcgctgggctacgagtacgacgctctctcaaacccttgtctgctcgtagtatctcgtctttccgctctatcgttcattccaagtctccccccgacattcctacactctcccactgtttcagccaacaagaagacgaacgcgagcttccttccgacgtattgtcctcagtcgcaggaggaatagttgcactgggaaaattcgatgcccttcatattggtcatcgagagcttgccattcaagcctcaaaggtcggacctccatttcttttatcatttgttggaatggcagaagtactgggttgggaacctagggctccaatagttgccaaatgtgatcgaaagcgggttctttcaacttgggctccatattgtggtaacatggtccctgcagagtttgaaattcaattttcaagtgttcgacaactcactccacgggaatttgttgaaaagttattgaaagagtttggagttcgtggggttgtggcgggtgaaaactaccgatttggatataaagcagctggtgatgcgagagagctggtgaagttgtgtgaagaatacggtatgggggcttacatcataaaatctgttatggacaagaaccaacactccatcagcacgaactcagattcaaaagacagaggacaagtttcatctactcgtgttcgccgcgcccttgctgtaggagatatgaagtatgtatctcaacttttgggtcgccaacaccgcatgatattgattgcaaaggagcaggaaagtttccgttggagcagacataaattgtcagttccaaagtcgtgtatgttaaatttaggtccaaaagagggtctatatgggaagtgtgatctcttaattggtgatgaaggcgacctagtagtgccatgtagtgtagtaattgacacagcatatatccacatagaaatggatgaggtaggtgtagtcgggctgtcagcggcgtcgtttggcagcccgattttgatttcgatttcaattcaagtacctgttcccaccattagcttgccaattcccaattcccattgcaattccctctattcttctgttgcatcttcccccgctcttcttaagctctatcactctgcacacttggccaaagcgcccaacccagctgcatgtaaacatgaatcatcatcatccccttccgtccctgacgtctcctacacatggcatttgcctgagccaaatgctcttgatgtttcccgcacctctgattgttcatccgcaaagatgaggactgtggtcgttttgctgggatggttaggagcaaagcaaaagcatctcaagaggtatgccgactggtatacttcccagggctttcacgtcattacctttactttacccatggctgacattctcaaataccagcctggtggtaaagtcgaacaccacattgacctgcttgtcactcatttggctgattggttagaagaggagcagggaaagaacctgctttttcatactttcagcaacaccggatggttgacgtatggtgtaatgttggagaagttccagaagcacgatccttctgtaatgggcaggattcggggctgtgttgtggattccgcacctgttgcagcacctgacccgcaggtctgggcttctggtttctctgcagcctttctgaaaaagcatagtgtagcaacgaaaggaaccacagacgctagtgagttagggatggatgctttggttgacagcaaggaagtagtggcacccaaacctgcagtaactgaggcagctttgcttttagttttggagaagttctttgaggtggttttgaatcttcctacagtgaacaggaggctttctgatgttttgggcttactgtcagcacgacaaccaagctgtccgcaattatatatctacagctctgcagacagagtcattcctgcaggatctgtggagtcgttcataaaacaacagcggagggctggacatgaggttagggcttgcaactttgtctcgacacctcatgttgatcatttcagaaatgacccgaagctgtatacttctgagctaactcactttctggaggactgtgtgcttacttgttgcaaacagtctcgttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF829

Protein Analysis

736

Amino Acids

81.12

Weight (kDa)

8.8

Isoelectric Point (pI)

44.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002622)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G19970 AT3G19970 AT3G19970 AT3G19970 AT3G19970
fragaria_vesca	FvH4_4g37150 FvH4_7g21480
malus_domestica	MD13G1003100.v1.1
prunus_persica	Prupe.1G349300_v2.0.a1
pyrus_communis	pycom13g00260 pycom16g00170
rosa_chinensis	RchiOBHm_Chr1g0365791 RchiOBHm_Chr4g0409441 RchiOBHm_Chr4g0446951
rosa_laevigata	RLG00000005618 RLG00000027396
rosa_multiflora	Rmu_co8345695.1_g000001 Rmu_sc0001753.1_g000006 Rmu_sc0002365.1_g000009 Rmu_sc0004311.1_g000013 Rmu_sc0011539.1_g000002 Rmu_sc0034955.1_g000001
rosa_roxburghii	Rroxscaffold_4G00290870 Rroxscaffold_5G00387280
rosa_rugosa	Rorug01G0324300 Rorug03G0341000 Rorug03G0341000 Rorug04G0376500
rosa_samantha	Rh1AG333200 Rh1BG294100 Rh1CG310800 Rh1DG326500 Rh4AG437900 Rh4BG446800 Rh4CG464100 Rh4DG445600
rosa_wichuraiana	Rw0G014000 Rw1G006220 Rw1G029570 Rw4G037450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	1544, 1733
AatII	GACGTC	1 cut(s)	1299
Acc36I	ACCTGC	4 cut(s)	1548, 1599, 1723, 1870
AccB1I	GGYRCC	1 cut(s)	1852
AccB7I	CCANNNNNTGG	1 cut(s)	500
AccBSI	CCGCTC	3 cut(s)	9, 195, 1202
AccI	GTMKAC	2 cut(s)	1445, 2147
AccII	CGCG	2 cut(s)	270, 798
AclWI	GGATC	2 cut(s)	1658, 2044
AcoI	YGGCCR	1 cut(s)	1233
AcsI	RAATTY	4 cut(s)	326, 528, 566, 934
AcyI	GRCGYC	2 cut(s)	1082, 1296
AfaI	GTAC	4 cut(s)	124, 147, 423, 1125
AfiI	CCNNNNNNNGG	4 cut(s)	89, 500, 950, 1308
AflII	CTTAAG	1 cut(s)	1208
AhdI	GACNNNNNGTC	1 cut(s)	289
AjiI	CACGTC	1 cut(s)	1465
AjnI	CCWGG	2 cut(s)	1452, 1510
AjuI	GAANNNNNNNTTGG	2 cut(s)	1141, 1173
AloI	GAACNNNNNNTCC	2 cut(s)	719, 751
Alw26I	GTCTC	5 cut(s)	29, 42, 219, 1303, 2107
AlwI	GGATC	2 cut(s)	1658, 2044
AlwNI	CAGNNNCTG	3 cut(s)	1724, 1871, 2039
AoxI	GGCC	1 cut(s)	1233
ApeKI	GCWGC	6 cut(s)	644, 1092, 1253, 1718, 1757, 1877
ApoI	RAATTY	4 cut(s)	326, 528, 566, 934
AspA2I	CCTAGG	1 cut(s)	437
AspLEI	GCGC	2 cut(s)	800, 1243
AspS9I	GGNCC	3 cut(s)	383, 511, 941
AsuHPI	GGTGA	5 cut(s)	26, 629, 662, 679, 995
AvaII	GGWCC	3 cut(s)	383, 511, 941
AvrII	CCTAGG	1 cut(s)	437
BalI	TGGCCA	1 cut(s)	1235
BanI	GGYRCC	1 cut(s)	1852
BanII	GRGCYC	2 cut(s)	445, 493
BauI	CACGAG	1 cut(s)	786
BbsI	GAAGAC	1 cut(s)	267
BbvI	GCAGC	6 cut(s)	656, 1104, 1240, 1730, 1769, 1889
BccI	CCATC	4 cut(s)	746, 1392, 1614, 1813
BciT130I	CCWGG	2 cut(s)	1454, 1512
BclI	TGATCA	1 cut(s)	2119
BcoDI	GTCTC	5 cut(s)	29, 42, 219, 1303, 2107
BfaI	CTAG	3 cut(s)	438, 998, 1806
BfmI	CTRYAG	8 cut(s)	516, 807, 1755, 1863, 1929, 2005, 2013, 2031
BfoI	RGCGCY	1 cut(s)	1244
BfrI	CTTAAG	1 cut(s)	1208
BfuAI	ACCTGC	4 cut(s)	1548, 1599, 1723, 1870
BisI	GCNGC	9 cut(s)	64, 645, 796, 1080, 1093, 1254, 1719, 1758, 1878
BlnI	CCTAGG	1 cut(s)	437
BlsI	GCNGC	9 cut(s)	65, 646, 797, 1081, 1094, 1255, 1720, 1759, 1879
BmcAI	AGTACT	1 cut(s)	423
Bme1390I	CCNGG	2 cut(s)	1454, 1512
Bme18I	GGWCC	3 cut(s)	383, 511, 941
BmeRI	GACNNNNNGTC	1 cut(s)	289
BmgBI	CACGTC	1 cut(s)	1465
BmgT120I	GGNCC	3 cut(s)	383, 511, 941
BmiI	GGNNCC	6 cut(s)	435, 444, 492, 513, 1795, 1854
BmrFI	CCNGG	2 cut(s)	1454, 1512
BmrI	ACTGGG	2 cut(s)	329, 434
BmsI	GCATC	5 cut(s)	322, 643, 1199, 1429, 1813
BmuI	ACTGGG	2 cut(s)	329, 434
BoxI	GACNNNNGTC	1 cut(s)	1382
BpiI	GAAGAC	1 cut(s)	267
BpmI	CTGGAG	1 cut(s)	2192
Bpu10I	CCTNAGC	1 cut(s)	1320
BpuEI	CTTGAG	1 cut(s)	1409
BsaHI	GRCGYC	2 cut(s)	1082, 1296
BsaJI	CCNNGG	5 cut(s)	437, 560, 1452, 1453, 1485
BsaWI	WCCGGW	1 cut(s)	1616
BsaXI	ACNNNNNCTCC	6 cut(s)	297, 327, 475, 505, 719, 749
Bsc4I	CCNNNNNNNGG	4 cut(s)	89, 500, 950, 1308
Bse1I	ACTGG	3 cut(s)	324, 429, 1445
Bse3DI	GCAATG	1 cut(s)	1162
BseBI	CCWGG	2 cut(s)	1454, 1512
BseDI	CCNNGG	5 cut(s)	437, 560, 1452, 1453, 1485
BseGI	GGATG	7 cut(s)	1057, 1277, 1361, 1403, 1625, 1824, 1828
BseLI	CCNNNNNNNGG	4 cut(s)	89, 500, 950, 1308
BseMI	GCAATG	1 cut(s)	1162
BseMII	CTCAG	5 cut(s)	309, 765, 1311, 1863, 2145
BseNI	ACTGG	3 cut(s)	324, 429, 1445
BseRI	GAGGAG	1 cut(s)	1589
BseXI	GCAGC	6 cut(s)	656, 1104, 1240, 1730, 1769, 1889
BseYI	CCCAGC	3 cut(s)	134, 1249, 1393
BsgI	GTGCAG	1 cut(s)	1209
Bsh1236I	CGCG	2 cut(s)	270, 798
BshFI	GGCC	1 cut(s)	1235
BshNI	GGYRCC	1 cut(s)	1852
BsiSI	CCGG	1 cut(s)	1617
BslFI	GGGAC	2 cut(s)	497, 1274
BslI	CCNNNNNNNGG	4 cut(s)	89, 500, 950, 1308
BsmAI	GTCTC	5 cut(s)	29, 42, 219, 1303, 2107
BsmBI	CGTCTC	2 cut(s)	29, 1303
BsmFI	GGGAC	2 cut(s)	497, 1274
BsnI	GGCC	1 cut(s)	1235
Bsp1286I	GDGCHC	2 cut(s)	445, 493
Bsp143I	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
Bsp19I	CCATGG	1 cut(s)	1485
BspANI	GGCC	1 cut(s)	1235
BspCNI	CTCAG	5 cut(s)	308, 764, 1312, 1864, 2146
BspFNI	CGCG	2 cut(s)	270, 798
BspLI	GGNNCC	6 cut(s)	435, 444, 492, 513, 1795, 1854
BspMAI	CTGCAG	5 cut(s)	520, 1759, 1867, 2017, 2035
BspMI	ACCTGC	4 cut(s)	1548, 1599, 1723, 1870
BspPI	GGATC	2 cut(s)	1658, 2044
BspQI	GCTCTTC	1 cut(s)	1209
BspT107I	GGYRCC	1 cut(s)	1852
BspTI	CTTAAG	1 cut(s)	1208
BsrBI	CCGCTC	3 cut(s)	9, 195, 1202
BsrDI	GCAATG	1 cut(s)	1162
BsrI	ACTGG	3 cut(s)	324, 429, 1445
BssECI	CCNNGG	5 cut(s)	437, 560, 1452, 1453, 1485
BssMI	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
BssNAI	GTATAC	2 cut(s)	1446, 2148
BssNI	GRCGYC	2 cut(s)	1082, 1296
BssSI	CACGAG	1 cut(s)	786
BssT1I	CCWWGG	2 cut(s)	437, 1485
Bst1107I	GTATAC	2 cut(s)	1446, 2148
Bst2BI	CACGAG	1 cut(s)	786
Bst2UI	CCWGG	2 cut(s)	1454, 1512
Bst4CI	ACNGT	7 cut(s)	245, 689, 1381, 1933, 1968, 2180, 2202
Bst6I	CTCTTC	2 cut(s)	1209, 1566
BstACI	GRCGYC	2 cut(s)	1082, 1296
BstAFI	CTTAAG	1 cut(s)	1208
BstAPI	GCANNNNNTGC	1 cut(s)	1715
BstC8I	GCNNGC	4 cut(s)	272, 360, 1145, 2092
BstDEI	CTNAG	5 cut(s)	295, 751, 1320, 1872, 2154
BstDSI	CCRYGG	2 cut(s)	560, 1485
BstF5I	GGATG	7 cut(s)	1057, 1277, 1361, 1403, 1625, 1824, 1828
BstFNI	CGCG	2 cut(s)	270, 798
BstH2I	RGCGCY	1 cut(s)	1244
BstHHI	GCGC	2 cut(s)	800, 1243
BstKTI	GATC	5 cut(s)	466, 973, 1666, 2039, 2122
BstMAI	GTCTC	5 cut(s)	29, 42, 219, 1303, 2107
BstMBI	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
BstMWI	GCNNNNNNNGC	7 cut(s)	15, 60, 368, 653, 852, 1232, 1715
BstNI	CCWGG	2 cut(s)	1454, 1512
BstNSI	RCATGY	1 cut(s)	1260
BstPAI	GACNNNNGTC	1 cut(s)	1382
BstSCI	CCNGG	2 cut(s)	1452, 1510
BstSFI	CTRYAG	8 cut(s)	516, 807, 1755, 1863, 1929, 2005, 2013, 2031
BstUI	CGCG	2 cut(s)	270, 798
BstV1I	GCAGC	6 cut(s)	656, 1104, 1240, 1730, 1769, 1889
BstV2I	GAAGAC	1 cut(s)	267
BstX2I	RGATCY	1 cut(s)	2036
BstXI	CCANNNNNNTGG	1 cut(s)	1514
BstYI	RGATCY	1 cut(s)	2036
BstZ17I	GTATAC	2 cut(s)	1446, 2148
BsuRI	GGCC	1 cut(s)	1235
BtgI	CCRYGG	2 cut(s)	560, 1485
BtrI	CACGTC	1 cut(s)	1465
BtsCI	GGATG	7 cut(s)	1057, 1277, 1361, 1403, 1625, 1824, 1828
BtsIMutI	CAGTG	3 cut(s)	241, 317, 1938
BveI	ACCTGC	4 cut(s)	1548, 1599, 1723, 1870
Cac8I	GCNNGC	4 cut(s)	272, 360, 1145, 2092
CaiI	CAGNNNCTG	3 cut(s)	1724, 1871, 2039
CfoI	GCGC	2 cut(s)	800, 1243
Cfr13I	GGNCC	3 cut(s)	383, 511, 941
CseI	GACGC	3 cut(s)	159, 1071, 1811
Csp6I	GTAC	4 cut(s)	123, 146, 422, 1124
CviAII	CATG	9 cut(s)	508, 856, 1008, 1257, 1265, 1308, 1486, 2078, 2114
CviQI	GTAC	4 cut(s)	123, 146, 422, 1124
DdeI	CTNAG	5 cut(s)	295, 751, 1320, 1872, 2154
DpnI	GATC	5 cut(s)	465, 972, 1665, 2038, 2121
DpnII	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
DrdI	GACNNNNNNGTC	2 cut(s)	1544, 1733
DriI	GACNNNNNGTC	1 cut(s)	289
DseDI	GACNNNNNNGTC	2 cut(s)	1544, 1733
EaeI	YGGCCR	1 cut(s)	1233
Eam1104I	CTCTTC	2 cut(s)	1209, 1566
Eam1105I	GACNNNNNGTC	1 cut(s)	289
EarI	CTCTTC	2 cut(s)	1209, 1566
EciI	GGCGGA	1 cut(s)	50
Eco130I	CCWWGG	2 cut(s)	437, 1485
Eco24I	GRGCYC	2 cut(s)	445, 493
Eco47I	GGWCC	3 cut(s)	383, 511, 941
EcoRII	CCWGG	2 cut(s)	1452, 1510
EcoT14I	CCWWGG	2 cut(s)	437, 1485
EcoT38I	GRGCYC	2 cut(s)	445, 493
ErhI	CCWWGG	2 cut(s)	437, 1485
Esp3I	CGTCTC	2 cut(s)	29, 1303
FaeI	CATG	9 cut(s)	511, 859, 1011, 1260, 1268, 1311, 1489, 2081, 2117
FaqI	GGGAC	2 cut(s)	497, 1274
FatI	CATG	9 cut(s)	507, 855, 1007, 1256, 1264, 1307, 1485, 2077, 2113
FauI	CCCGC	5 cut(s)	465, 607, 1207, 1352, 1737
FbaI	TGATCA	1 cut(s)	2119
FblI	GTMKAC	2 cut(s)	1445, 2147
Fnu4HI	GCNGC	9 cut(s)	64, 645, 796, 1080, 1093, 1254, 1719, 1758, 1878
FokI	GGATG	7 cut(s)	1064, 1264, 1348, 1410, 1632, 1831, 1835
FriOI	GRGCYC	2 cut(s)	445, 493
Fsp4HI	GCNGC	9 cut(s)	64, 645, 796, 1080, 1093, 1254, 1719, 1758, 1878
FspBI	CTAG	3 cut(s)	438, 998, 1806
GlaI	GCGC	2 cut(s)	799, 1242
GluI	GCNGC	9 cut(s)	64, 645, 796, 1080, 1093, 1254, 1719, 1758, 1878
GsaI	CCCAGC	3 cut(s)	138, 1253, 1397
GsuI	CTGGAG	1 cut(s)	2192
HaeII	RGCGCY	1 cut(s)	1244
HaeIII	GGCC	1 cut(s)	1235
HapII	CCGG	1 cut(s)	1617
HgaI	GACGC	3 cut(s)	159, 1071, 1811
HhaI	GCGC	2 cut(s)	800, 1243
Hin1I	GRCGYC	2 cut(s)	1082, 1296
Hin1II	CATG	9 cut(s)	511, 859, 1011, 1260, 1268, 1311, 1489, 2081, 2117
Hin6I	GCGC	2 cut(s)	798, 1241
HinP1I	GCGC	2 cut(s)	798, 1241
HincII	GTYRAC	2 cut(s)	1626, 1834
HindII	GTYRAC	2 cut(s)	1626, 1834
HinfI	GANTC	9 cut(s)	31, 129, 755, 1268, 1684, 1703, 1921, 2022, 2045
HpaII	CCGG	1 cut(s)	1617
HphI	GGTGA	5 cut(s)	26, 629, 662, 679, 995
Hpy166II	GTNNAC	6 cut(s)	1262, 1446, 1626, 1834, 1936, 2148
Hpy188I	TCNGA	8 cut(s)	283, 383, 754, 1354, 1767, 1951, 2129, 2155
Hpy188III	TCNNGA	7 cut(s)	28, 353, 1334, 1426, 1654, 2104, 2171
Hpy8I	GTNNAC	6 cut(s)	1262, 1446, 1626, 1834, 1936, 2148
Hpy99I	CGWCG	3 cut(s)	153, 287, 1087
HpyAV	CCTTC	5 cut(s)	288, 347, 983, 1293, 1677
HpyCH4III	ACNGT	7 cut(s)	245, 689, 1381, 1933, 1968, 2180, 2202
HpyCH4IV	ACGT	5 cut(s)	40, 285, 1296, 1464, 1628
HpyF10VI	GCNNNNNNNGC	7 cut(s)	15, 60, 368, 653, 852, 1232, 1715
HpyF3I	CTNAG	5 cut(s)	295, 751, 1320, 1872, 2154
HpySE526I	ACGT	5 cut(s)	40, 285, 1296, 1464, 1628
Hsp92I	GRCGYC	2 cut(s)	1082, 1296
Hsp92II	CATG	9 cut(s)	511, 859, 1011, 1260, 1268, 1311, 1489, 2081, 2117
HspAI	GCGC	2 cut(s)	798, 1241
Ksp22I	TGATCA	1 cut(s)	2119
Kzo9I	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
LguI	GCTCTTC	1 cut(s)	1209
LmnI	GCTCC	6 cut(s)	448, 496, 874, 894, 1406, 1576
Lsp1109I	GCAGC	6 cut(s)	656, 1104, 1240, 1730, 1769, 1889
LweI	GCATC	5 cut(s)	322, 643, 1199, 1429, 1813
MaeI	CTAG	3 cut(s)	438, 998, 1806
MaeII	ACGT	5 cut(s)	40, 285, 1296, 1464, 1628
MaeIII	GTNAC	3 cut(s)	503, 1546, 1867
MalI	GATC	5 cut(s)	465, 972, 1665, 2038, 2121
MbiI	CCGCTC	3 cut(s)	9, 195, 1202
MboI	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
MboII	GAAGA	7 cut(s)	272, 692, 1173, 1185, 1196, 1583, 1916
MflI	RGATCY	1 cut(s)	2036
MhlI	GDGCHC	2 cut(s)	445, 493
MlsI	TGGCCA	1 cut(s)	1235
MluNI	TGGCCA	1 cut(s)	1235
MlyI	GAGTC	2 cut(s)	2031, 2054
MmeI	TCCRAC	5 cut(s)	306, 361, 388, 872, 1623
Mox20I	TGGCCA	1 cut(s)	1235
MscI	TGGCCA	1 cut(s)	1235
MseI	TTAA	4 cut(s)	932, 977, 1209, 2209
MslI	CAYNNNNRTG	1 cut(s)	1046
Msp20I	TGGCCA	1 cut(s)	1235
MspA1I	CMGCKG	4 cut(s)	647, 1079, 1253, 2065
MspCI	CTTAAG	1 cut(s)	1208
MspI	CCGG	1 cut(s)	1617
MspR9I	CCNGG	2 cut(s)	1454, 1512
MvaI	CCWGG	2 cut(s)	1454, 1512
MvnI	CGCG	2 cut(s)	270, 798
MwoI	GCNNNNNNNGC	7 cut(s)	15, 60, 368, 653, 852, 1232, 1715
NcoI	CCATGG	1 cut(s)	1485
NdeII	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
NlaIII	CATG	9 cut(s)	511, 859, 1011, 1260, 1268, 1311, 1489, 2081, 2117
NlaIV	GGNNCC	6 cut(s)	435, 444, 492, 513, 1795, 1854
NmuCI	GTSAC	1 cut(s)	1546
NspI	RCATGY	1 cut(s)	1260
PasI	CCCWGGG	1 cut(s)	1453
PciSI	GCTCTTC	1 cut(s)	1209
PfeI	GAWTC	7 cut(s)	31, 129, 755, 1268, 1684, 1703, 1921
PflFI	GACNNNGTC	1 cut(s)	2021
PflMI	CCANNNNNTGG	1 cut(s)	500
PkrI	GCNGC	9 cut(s)	65, 646, 797, 1081, 1094, 1255, 1720, 1759, 1879
PleI	GAGTC	2 cut(s)	2030, 2053
PpsI	GAGTC	2 cut(s)	2030, 2053
PshAI	GACNNNNGTC	1 cut(s)	1382
Psp6I	CCWGG	2 cut(s)	1452, 1510
PspFI	CCCAGC	3 cut(s)	134, 1249, 1393
PspGI	CCWGG	2 cut(s)	1452, 1510
PspN4I	GGNNCC	6 cut(s)	435, 444, 492, 513, 1795, 1854
PspPI	GGNCC	3 cut(s)	383, 511, 941
PstI	CTGCAG	5 cut(s)	520, 1759, 1867, 2017, 2035
PstNI	CAGNNNCTG	3 cut(s)	1724, 1871, 2039
PsuI	RGATCY	1 cut(s)	2036
PsyI	GACNNNGTC	1 cut(s)	2021
PvuII	CAGCTG	2 cut(s)	647, 1253
RsaI	GTAC	4 cut(s)	124, 147, 423, 1125
RsaNI	GTAC	4 cut(s)	123, 146, 422, 1124
RseI	CAYNNNNRTG	1 cut(s)	1046
SapI	GCTCTTC	1 cut(s)	1209
SaqAI	TTAA	4 cut(s)	932, 977, 1209, 2209
SatI	GCNGC	9 cut(s)	64, 645, 796, 1080, 1093, 1254, 1719, 1758, 1878
Sau3AI	GATC	5 cut(s)	463, 970, 1663, 2036, 2119
Sau96I	GGNCC	3 cut(s)	383, 511, 941
SbfI	CCTGCAGG	1 cut(s)	2035
ScaI	AGTACT	1 cut(s)	423
SchI	GAGTC	2 cut(s)	2031, 2054
ScrFI	CCNGG	2 cut(s)	1454, 1512
SdaI	CCTGCAGG	1 cut(s)	2035
SduI	GDGCHC	2 cut(s)	445, 493
SfaNI	GCATC	5 cut(s)	322, 643, 1199, 1429, 1813
SfcI	CTRYAG	8 cut(s)	516, 807, 1755, 1863, 1929, 2005, 2013, 2031
SinI	GGWCC	3 cut(s)	383, 511, 941
SmiMI	CAYNNNNRTG	1 cut(s)	1046
SmlI	CTYRAG	2 cut(s)	1208, 1424
SmoI	CTYRAG	2 cut(s)	1208, 1424
Sse8387I	CCTGCAGG	1 cut(s)	2035
SspMI	CTAG	3 cut(s)	438, 998, 1806
StyD4I	CCNGG	2 cut(s)	1452, 1510
StyI	CCWWGG	2 cut(s)	437, 1485
TaaI	ACNGT	7 cut(s)	245, 689, 1381, 1933, 1968, 2180, 2202
TaiI	ACGT	5 cut(s)	43, 288, 1299, 1467, 1631
TaqI	TCGA	9 cut(s)	29, 127, 330, 352, 466, 547, 1109, 1524, 2105
TatI	WGTACW	1 cut(s)	421
TauI	GCSGC	3 cut(s)	66, 798, 1082
TfiI	GAWTC	7 cut(s)	31, 129, 755, 1268, 1684, 1703, 1921
Tru1I	TTAA	4 cut(s)	932, 977, 1209, 2209
Tru9I	TTAA	4 cut(s)	932, 977, 1209, 2209
TscAI	CASTG	3 cut(s)	248, 324, 1938
TseFI	GTSAC	1 cut(s)	1546
TseI	GCWGC	6 cut(s)	644, 1092, 1253, 1718, 1757, 1877
Tsp45I	GTSAC	1 cut(s)	1546
TspDTI	ATGAA	9 cut(s)	194, 329, 768, 833, 1002, 1281, 1350, 1589, 2041
TspGWI	ACGGA	2 cut(s)	878, 1276
TspRI	CASTG	3 cut(s)	248, 324, 1938
Tth111I	GACNNNGTC	1 cut(s)	2021
Van91I	CCANNNNNTGG	1 cut(s)	500
Vha464I	CTTAAG	1 cut(s)	1208
VpaK11BI	GGWCC	3 cut(s)	383, 511, 941
XapI	RAATTY	4 cut(s)	326, 528, 566, 934
XceI	RCATGY	1 cut(s)	1260
XcmI	CCANNNNNNNNNTGG	2 cut(s)	86, 92
XmaJI	CCTAGG	1 cut(s)	437
XmiI	GTMKAC	2 cut(s)	1445, 2147
XspI	CTAG	3 cut(s)	438, 998, 1806
ZraI	GACGTC	1 cut(s)	1297
ZrmI	AGTACT	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.