Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr2

Orthogroup ID

OG0003358

Physical Location & Seq

Genomic Coordinates Forward (+)

528176 .. 531005

Gene Structure 2830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000005642

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1383 bp

ATGATGTCTGTGCAGAGCAGTAGACGGGTCTTTGGTTTGGTTATTGGATCATTATCTATGCTTTTATTGTTCCAAGGAATTGCTTGTGACGCAGACTATGCTCAAGCACTTGCCAAGTCATTGTTGTATTATGAGGGTCAACGCTCAGGGAAGTTGCCCCCTATTGGCAAACTCCAGAGAGTGGGGTGGCGAGGAGATTCCGGACTAGAAGACGGCAGTGATGCTGGAATTGATTTGGTGGGAGGCTACTACGATGCCGGAGACAATCTCAAGTTGGGATTTCCAATGGCCTTCACAGTAACAATGCTGTCATGGAGCACGATCGAATTCCATAGAAAGCTCAAGGCCAAATATGAGATCGCTAATGCTCTTCGTGCTATCAAGTGGGGAACAGATTACTTGATAAAAGCACATCCACAGCCCGAAGTGCTTTATGGGCATATTGGGGGTGTTGATTCAGACCATCAATGTTGGCAGAGACCAGAGGACATGACCACCCCGAGGACCGTGTTCATGATTGATGACCAACACCCGGGCTCTGATCTCGCCGCTGAAACTGCTGCTGCTTTGGCTGCTGCCTCAATTGCTTTTGAACGTTTTGATAGAAGTTACTCATCCCAACTCGTAACTCATGCAAAGAAGGACGAGATACTGTGGGCAGCGGCATGGCTCCATCGTGCTACTAATGAACAGAAGTACCTCAACTTCCTAAGCGAAGCGGAAGATATAGGTGGAACAAGAACAACATTCTCATGGGATGACAAATTCGTCGGCGCGCAGGTTTTGGCTGCAATGGAAAATGGGGGGAGTATAAGCGCCATGCATGCAGAGGAATTCATATGTTCATGCGTTCAGAAAGGAAACAAAAACGTGAAGAAGACACCCGGAGGCTTGCTTTGGTTTCTGCCATGGAATAACAATCAATACGTTGCCACTGCTACATTTGTCACCACTGTTTATTCCATTTATTTGGACGCAAAAAAGGCCTCCATCAACTGTCCTGGTGGCGCTGCTCACCCCTCTGATCTCATTGCATCTGCCAAGTCACTAGTTAACCCGATCGATCGACTAGTGGATTACATCTTGGGCTCAAACCCGAAAAACATGAGCTATATGGTTGGATATGGATCGAATTATCCGAAGCAAATTCACCACAGAGGAGCATCAATCGTCTCAATCAAGAAGGATCCAGCTCCTGTGACATGCCAAGGTGGGTTTGACTGGTTTCACAGACCCGAGCCCAACCCGAACGTGCTGGAGGGAGCAATTGTGACCCCAGATGAAAGTGATGGTTTTGCGGACGACAGGACCAACTTTCAGTTAGCTGAACCAACGACCGTTACTAATGCTCCACTAGTTGTTGTCTTAGCTCACCTTGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 map00500 map01100

Pfam Domains

Protein Families

Glyco_hydro_9

Protein Analysis

461

Amino Acids

50.33

Weight (kDa)

5.91

Isoelectric Point (pI)

32.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_9	PF00759	33 - 214	5.7e-74	Glycosyl hydrolase family 9
Glyco_hydro_9	PF00759	214 - 456	3.7e-56	Glycosyl hydrolase family 9

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003358)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44540 AT2G44550 AT2G44560 AT2G44570 AT2G44570
fragaria_vesca	FvH4_4g36880 FvH4_4g36880 FvH4_7g08460
malus_domestica	MD02G1228000.v1.1 MD13G1006100.v1.1 MD13G1006300.v1.1
prunus_persica	Prupe.2G112000_v2.0.a1
pyrus_communis	pycom13g00500 pycom13g00520
rosa_chinensis	RchiOBHm_Chr0c20g0500171 RchiOBHm_Chr1g0340181 RchiOBHm_Chr1g0343211 RchiOBHm_Chr4g0446651
rosa_laevigata	RLG00000005642 RLG00000028991
rosa_multiflora	Rmu_co8338879.1_g000001 Rmu_sc0001753.1_g000044 Rmu_sc0006993.1_g000010
rosa_roxburghii	Rroxscaffold_4G00310960
rosa_rugosa	Rorug01G0165700
rosa_samantha	Rh1AG179800 Rh1AG181300 Rh1CG168100 Rh1DG181500 Rh4AG434800 Rh4BG443900 Rh4CG461200 Rh4DG442700
rosa_wichuraiana	Rw1G012330 Rw1G015050 Rw4G037180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	767
Acc36I	ACCTGC	1 cut(s)	769
AccB7I	CCANNNNNTGG	1 cut(s)	181
AccI	GTMKAC	1 cut(s)	22
AccII	CGCG	1 cut(s)	776
AccIII	TCCGGA	1 cut(s)	200
AciI	CCGC	4 cut(s)	549, 662, 719, 1298
AclI	AACGTT	1 cut(s)	595
AclWI	GGATC	4 cut(s)	55, 1135, 1181, 1194
AcsI	RAATTY	4 cut(s)	326, 764, 833, 1146
AfaI	GTAC	1 cut(s)	698
AfiI	CCNNNNNNNGG	4 cut(s)	164, 181, 501, 532
AgsI	TTSAA	1 cut(s)	593
AhlI	ACTAGT	3 cut(s)	1048, 1069, 1354
AjnI	CCWGG	1 cut(s)	1000
AluBI	AGCT	5 cut(s)	340, 1110, 1193, 1325, 1370
AluI	AGCT	5 cut(s)	340, 1110, 1193, 1325, 1370
Alw21I	GWGCWC	1 cut(s)	320
Alw26I	GTCTC	3 cut(s)	255, 472, 1177
AlwI	GGATC	4 cut(s)	55, 1135, 1181, 1194
AlwNI	CAGNNNCTG	1 cut(s)	1196
Ama87I	CYCGRG	3 cut(s)	499, 532, 1235
Aor13HI	TCCGGA	1 cut(s)	200
AoxI	GGCC	3 cut(s)	288, 345, 984
ApeKI	GCWGC	7 cut(s)	560, 563, 572, 575, 659, 788, 1010
ApoI	RAATTY	4 cut(s)	326, 764, 833, 1146
AspLEI	GCGC	4 cut(s)	776, 778, 818, 1010
AspS9I	GGNCC	2 cut(s)	504, 1308
AsuC2I	CCSGG	3 cut(s)	533, 534, 885
AsuHPI	GGTGA	4 cut(s)	940, 1007, 1142, 1364
AvaI	CYCGRG	3 cut(s)	499, 532, 1235
AvaII	GGWCC	2 cut(s)	504, 1308
BaeI	ACNNNNGTAYC	2 cut(s)	680, 713
BamHI	GGATCC	1 cut(s)	1186
BanII	GRGCYC	3 cut(s)	539, 1091, 1242
BarI	GAAGNNNNNNTAC	2 cut(s)	689, 721
BbsI	GAAGAC	2 cut(s)	216, 884
Bbv12I	GWGCWC	1 cut(s)	320
BbvI	GCAGC	7 cut(s)	547, 550, 559, 562, 671, 775, 997
BccI	CCATC	4 cut(s)	471, 681, 998, 1283
BceAI	ACGGC	1 cut(s)	229
BciT130I	CCWGG	1 cut(s)	1002
BcnI	CCSGG	3 cut(s)	533, 534, 885
BcoDI	GTCTC	3 cut(s)	255, 472, 1177
BcuI	ACTAGT	3 cut(s)	1048, 1069, 1354
BfaI	CTAG	4 cut(s)	206, 1049, 1070, 1355
BfoI	RGCGCY	2 cut(s)	819, 1011
BfuAI	ACCTGC	1 cut(s)	769
BisI	GCNGC	9 cut(s)	549, 561, 564, 573, 576, 660, 663, 789, 1011
BlsI	GCNGC	9 cut(s)	550, 562, 565, 574, 577, 661, 664, 790, 1012
Bme1390I	CCNGG	4 cut(s)	533, 534, 885, 1002
Bme18I	GGWCC	2 cut(s)	504, 1308
BmeT110I	CYCGRG	3 cut(s)	499, 532, 1235
BmgT120I	GGNCC	2 cut(s)	504, 1308
BmiI	GGNNCC	2 cut(s)	671, 1188
BmrFI	CCNGG	4 cut(s)	533, 534, 885, 1002
BmsI	GCATC	4 cut(s)	211, 244, 1043, 1172
BpiI	GAAGAC	2 cut(s)	216, 884
BplI	GAGNNNNNCTC	2 cut(s)	252, 284
BpmI	CTGGAG	2 cut(s)	158, 1277
Bpu10I	CCTNAGC	2 cut(s)	145, 710
BpuEI	CTTGAG	3 cut(s)	87, 254, 326
BpuMI	CCSGG	3 cut(s)	533, 534, 885
Bsa29I	ATCGAT	1 cut(s)	1062
BsaBI	GATNNNNATC	2 cut(s)	52, 1126
BsaI	GGTCTC	1 cut(s)	472
BsaJI	CCNNGG	5 cut(s)	73, 500, 532, 908, 1207
BsaWI	WCCGGW	1 cut(s)	200
BsaXI	ACNNNNNCTCC	4 cut(s)	1254, 1284, 1333, 1363
Bsc4I	CCNNNNNNNGG	4 cut(s)	164, 181, 501, 532
Bse1I	ACTGG	1 cut(s)	1226
Bse3DI	GCAATG	2 cut(s)	798, 1029
Bse8I	GATNNNNATC	2 cut(s)	52, 1126
BseAI	TCCGGA	1 cut(s)	200
BseBI	CCWGG	1 cut(s)	1002
BseCI	ATCGAT	1 cut(s)	1062
BseDI	CCNNGG	5 cut(s)	73, 500, 532, 908, 1207
BseGI	GGATG	3 cut(s)	412, 614, 763
BseJI	GATNNNNATC	2 cut(s)	52, 1126
BseLI	CCNNNNNNNGG	4 cut(s)	164, 181, 501, 532
BseMI	GCAATG	2 cut(s)	798, 1029
BseMII	CTCAG	1 cut(s)	159
BseNI	ACTGG	1 cut(s)	1226
BsePI	GCGCGC	1 cut(s)	774
BseRI	GAGGAG	2 cut(s)	207, 1173
BseXI	GCAGC	7 cut(s)	547, 550, 559, 562, 671, 775, 997
BsgI	GTGCAG	1 cut(s)	32
Bsh1236I	CGCG	1 cut(s)	776
Bsh1285I	CGRYCG	4 cut(s)	324, 1062, 1066, 1338
BshFI	GGCC	3 cut(s)	290, 347, 986
BshVI	ATCGAT	1 cut(s)	1062
BsiEI	CGRYCG	4 cut(s)	324, 1062, 1066, 1338
BsiHKAI	GWGCWC	1 cut(s)	320
BsiHKCI	CYCGRG	3 cut(s)	499, 532, 1235
BsiSI	CCGG	4 cut(s)	201, 258, 533, 885
BslI	CCNNNNNNNGG	4 cut(s)	164, 181, 501, 532
BsmAI	GTCTC	3 cut(s)	255, 472, 1177
BsmBI	CGTCTC	1 cut(s)	1177
BsnI	GGCC	3 cut(s)	290, 347, 986
Bso31I	GGTCTC	1 cut(s)	472
BsoBI	CYCGRG	3 cut(s)	499, 532, 1235
Bsp1286I	GDGCHC	4 cut(s)	320, 539, 1091, 1242
Bsp13I	TCCGGA	1 cut(s)	200
Bsp143I	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
Bsp19I	CCATGG	1 cut(s)	908
BspACI	CCGC	4 cut(s)	549, 662, 719, 1298
BspANI	GGCC	3 cut(s)	290, 347, 986
BspCNI	CTCAG	1 cut(s)	158
BspDI	ATCGAT	1 cut(s)	1062
BspEI	TCCGGA	1 cut(s)	200
BspFNI	CGCG	1 cut(s)	776
BspHI	TCATGA	1 cut(s)	513
BspLI	GGNNCC	2 cut(s)	671, 1188
BspMI	ACCTGC	1 cut(s)	769
BspPI	GGATC	4 cut(s)	55, 1135, 1181, 1194
BspQI	GCTCTTC	1 cut(s)	375
BspTNI	GGTCTC	1 cut(s)	472
BsrDI	GCAATG	2 cut(s)	798, 1029
BsrI	ACTGG	1 cut(s)	1226
BssECI	CCNNGG	5 cut(s)	73, 500, 532, 908, 1207
BssHII	GCGCGC	1 cut(s)	774
BssMI	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
BssT1I	CCWWGG	3 cut(s)	73, 908, 1207
Bst2UI	CCWGG	1 cut(s)	1002
Bst4CI	ACNGT	6 cut(s)	298, 508, 654, 955, 998, 1339
Bst6I	CTCTTC	1 cut(s)	375
BstAPI	GCANNNNNTGC	1 cut(s)	98
BstC8I	GCNNGC	3 cut(s)	776, 825, 893
BstDEI	CTNAG	3 cut(s)	145, 710, 1366
BstDSI	CCRYGG	1 cut(s)	908
BstF5I	GGATG	3 cut(s)	412, 614, 763
BstFNI	CGCG	1 cut(s)	776
BstH2I	RGCGCY	2 cut(s)	819, 1011
BstHHI	GCGC	4 cut(s)	776, 778, 818, 1010
BstKTI	GATC	9 cut(s)	50, 324, 360, 544, 1027, 1062, 1066, 1130, 1189
BstMAI	GTCTC	3 cut(s)	255, 472, 1177
BstMBI	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
BstMCI	CGRYCG	4 cut(s)	324, 1062, 1066, 1338
BstNI	CCWGG	1 cut(s)	1002
BstNSI	RCATGY	2 cut(s)	827, 1206
BstSCI	CCNGG	4 cut(s)	531, 532, 883, 1000
BstUI	CGCG	1 cut(s)	776
BstV1I	GCAGC	7 cut(s)	547, 550, 559, 562, 671, 775, 997
BstV2I	GAAGAC	2 cut(s)	216, 884
BstX2I	RGATCY	1 cut(s)	1186
BstXI	CCANNNNNNTGG	1 cut(s)	970
BstYI	RGATCY	1 cut(s)	1186
Bsu15I	ATCGAT	1 cut(s)	1062
BsuRI	GGCC	3 cut(s)	290, 347, 986
BsuTUI	ATCGAT	1 cut(s)	1062
BtgI	CCRYGG	1 cut(s)	908
BtsCI	GGATG	3 cut(s)	412, 614, 763
BtsI	GCAGTG	2 cut(s)	223, 933
BtsIMutI	CAGTG	3 cut(s)	223, 933, 951
BveI	ACCTGC	1 cut(s)	769
Cac8I	GCNNGC	3 cut(s)	776, 825, 893
CaiI	CAGNNNCTG	1 cut(s)	1196
CciI	TCATGA	1 cut(s)	513
CfoI	GCGC	4 cut(s)	776, 778, 818, 1010
Cfr13I	GGNCC	2 cut(s)	504, 1308
Cfr9I	CCCGGG	1 cut(s)	532
ClaI	ATCGAT	1 cut(s)	1062
CseI	GACGC	2 cut(s)	98, 983
Csp6I	GTAC	1 cut(s)	697
CviQI	GTAC	1 cut(s)	697
DdeI	CTNAG	3 cut(s)	145, 710, 1366
DpnI	GATC	9 cut(s)	49, 323, 359, 543, 1026, 1061, 1065, 1129, 1188
DpnII	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
DrdI	GACNNNNNNGTC	1 cut(s)	767
DseDI	GACNNNNNNGTC	1 cut(s)	767
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
Eco130I	CCWWGG	3 cut(s)	73, 908, 1207
Eco147I	AGGCCT	1 cut(s)	986
Eco24I	GRGCYC	3 cut(s)	539, 1091, 1242
Eco31I	GGTCTC	1 cut(s)	472
Eco47I	GGWCC	2 cut(s)	504, 1308
Eco88I	CYCGRG	3 cut(s)	499, 532, 1235
EcoRI	GAATTC	2 cut(s)	326, 833
EcoRII	CCWGG	1 cut(s)	1000
EcoT14I	CCWWGG	3 cut(s)	73, 908, 1207
EcoT22I	ATGCAT	1 cut(s)	825
EcoT38I	GRGCYC	3 cut(s)	539, 1091, 1242
ErhI	CCWWGG	3 cut(s)	73, 908, 1207
Esp3I	CGTCTC	1 cut(s)	1177
FauNDI	CATATG	1 cut(s)	839
FblI	GTMKAC	1 cut(s)	22
Fnu4HI	GCNGC	9 cut(s)	549, 561, 564, 573, 576, 660, 663, 789, 1011
FokI	GGATG	3 cut(s)	399, 601, 770
FriOI	GRGCYC	3 cut(s)	539, 1091, 1242
Fsp4HI	GCNGC	9 cut(s)	549, 561, 564, 573, 576, 660, 663, 789, 1011
FspBI	CTAG	4 cut(s)	206, 1049, 1070, 1355
GlaI	GCGC	4 cut(s)	775, 777, 817, 1009
GluI	GCNGC	9 cut(s)	549, 561, 564, 573, 576, 660, 663, 789, 1011
GsuI	CTGGAG	2 cut(s)	158, 1277
HaeII	RGCGCY	2 cut(s)	819, 1011
HaeIII	GGCC	3 cut(s)	290, 347, 986
HapII	CCGG	4 cut(s)	201, 258, 533, 885
HgaI	GACGC	2 cut(s)	98, 983
HhaI	GCGC	4 cut(s)	776, 778, 818, 1010
Hin6I	GCGC	4 cut(s)	774, 776, 816, 1008
HinP1I	GCGC	4 cut(s)	774, 776, 816, 1008
HincII	GTYRAC	2 cut(s)	140, 1054
HindII	GTYRAC	2 cut(s)	140, 1054
HinfI	GANTC	2 cut(s)	197, 455
HpaI	GTTAAC	1 cut(s)	1054
HpaII	CCGG	4 cut(s)	201, 258, 533, 885
HphI	GGTGA	4 cut(s)	940, 1007, 1142, 1364
Hpy166II	GTNNAC	3 cut(s)	23, 140, 1054
Hpy188I	TCNGA	5 cut(s)	460, 541, 855, 1024, 1140
Hpy188III	TCNNGA	4 cut(s)	175, 201, 514, 1180
Hpy8I	GTNNAC	3 cut(s)	23, 140, 1054
Hpy99I	CGWCG	1 cut(s)	773
HpyAV	CCTTC	3 cut(s)	301, 634, 1177
HpyCH4III	ACNGT	6 cut(s)	298, 508, 654, 955, 998, 1339
HpyCH4IV	ACGT	4 cut(s)	595, 870, 927, 1251
HpyCH4V	TGCA	6 cut(s)	13, 635, 791, 823, 827, 1034
HpyF3I	CTNAG	3 cut(s)	145, 710, 1366
HpySE526I	ACGT	4 cut(s)	595, 870, 927, 1251
HspAI	GCGC	4 cut(s)	774, 776, 816, 1008
Kpn2I	TCCGGA	1 cut(s)	200
KspAI	GTTAAC	1 cut(s)	1054
Kzo9I	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
LguI	GCTCTTC	1 cut(s)	375
LmnI	GCTCC	6 cut(s)	315, 675, 1160, 1198, 1262, 1354
Lsp1109I	GCAGC	7 cut(s)	547, 550, 559, 562, 671, 775, 997
LweI	GCATC	4 cut(s)	211, 244, 1043, 1172
MaeI	CTAG	4 cut(s)	206, 1049, 1070, 1355
MaeII	ACGT	4 cut(s)	595, 870, 927, 1251
MaeIII	GTNAC	9 cut(s)	86, 298, 608, 625, 946, 1044, 1198, 1270, 1339
MalI	GATC	9 cut(s)	49, 323, 359, 543, 1026, 1061, 1065, 1129, 1188
MboI	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
MboII	GAAGA	5 cut(s)	221, 362, 734, 886, 889
MfeI	CAATTG	2 cut(s)	582, 1266
MflI	RGATCY	1 cut(s)	1186
MhlI	GDGCHC	4 cut(s)	320, 539, 1091, 1242
MluCI	AATT	9 cut(s)	78, 228, 326, 582, 764, 833, 1132, 1146, 1266
MmeI	TCCRAC	1 cut(s)	1099
Mph1103I	ATGCAT	1 cut(s)	825
MroI	TCCGGA	1 cut(s)	200
MseI	TTAA	2 cut(s)	1053, 1381
MslI	CAYNNNNRTG	1 cut(s)	751
MspA1I	CMGCKG	2 cut(s)	551, 662
MspI	CCGG	4 cut(s)	201, 258, 533, 885
MspR9I	CCNGG	4 cut(s)	533, 534, 885, 1002
MunI	CAATTG	2 cut(s)	582, 1266
MvaI	CCWGG	1 cut(s)	1002
MvnI	CGCG	1 cut(s)	776
NciI	CCSGG	3 cut(s)	533, 534, 885
NcoI	CCATGG	1 cut(s)	908
NdeI	CATATG	1 cut(s)	839
NdeII	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
NlaIV	GGNNCC	2 cut(s)	671, 1188
NmuCI	GTSAC	5 cut(s)	86, 946, 1044, 1198, 1270
NsiI	ATGCAT	1 cut(s)	825
NspI	RCATGY	2 cut(s)	827, 1206
PaeI	GCATGC	1 cut(s)	827
PagI	TCATGA	1 cut(s)	513
PauI	GCGCGC	1 cut(s)	774
PceI	AGGCCT	1 cut(s)	986
PciSI	GCTCTTC	1 cut(s)	375
PcsI	WCGNNNNNNNCGW	1 cut(s)	1136
PfeI	GAWTC	2 cut(s)	197, 455
PflMI	CCANNNNNTGG	1 cut(s)	181
PkrI	GCNGC	9 cut(s)	550, 562, 565, 574, 577, 661, 664, 790, 1012
Ple19I	CGATCG	3 cut(s)	324, 1062, 1066
Psp1406I	AACGTT	1 cut(s)	595
Psp6I	CCWGG	1 cut(s)	1000
PspGI	CCWGG	1 cut(s)	1000
PspN4I	GGNNCC	2 cut(s)	671, 1188
PspPI	GGNCC	2 cut(s)	504, 1308
PstNI	CAGNNNCTG	1 cut(s)	1196
PsuI	RGATCY	1 cut(s)	1186
PteI	GCGCGC	1 cut(s)	774
PvuI	CGATCG	3 cut(s)	324, 1062, 1066
RsaI	GTAC	1 cut(s)	698
RsaNI	GTAC	1 cut(s)	697
RseI	CAYNNNNRTG	1 cut(s)	751
SapI	GCTCTTC	1 cut(s)	375
SaqAI	TTAA	2 cut(s)	1053, 1381
SatI	GCNGC	9 cut(s)	549, 561, 564, 573, 576, 660, 663, 789, 1011
Sau3AI	GATC	9 cut(s)	47, 321, 357, 541, 1024, 1059, 1063, 1127, 1186
Sau96I	GGNCC	2 cut(s)	504, 1308
ScrFI	CCNGG	4 cut(s)	533, 534, 885, 1002
SduI	GDGCHC	4 cut(s)	320, 539, 1091, 1242
SfaNI	GCATC	4 cut(s)	211, 244, 1043, 1172
SinI	GGWCC	2 cut(s)	504, 1308
SmaI	CCCGGG	1 cut(s)	534
SmiMI	CAYNNNNRTG	1 cut(s)	751
SmlI	CTYRAG	3 cut(s)	102, 269, 341
SmoI	CTYRAG	3 cut(s)	102, 269, 341
SpeI	ACTAGT	3 cut(s)	1048, 1069, 1354
SphI	GCATGC	1 cut(s)	827
Sse9I	AATT	9 cut(s)	78, 228, 326, 582, 764, 833, 1132, 1146, 1266
SseBI	AGGCCT	1 cut(s)	986
SsiI	CCGC	4 cut(s)	549, 662, 719, 1298
SspMI	CTAG	4 cut(s)	206, 1049, 1070, 1355
StuI	AGGCCT	1 cut(s)	986
StyD4I	CCNGG	4 cut(s)	531, 532, 883, 1000
StyI	CCWWGG	3 cut(s)	73, 908, 1207
TaaI	ACNGT	6 cut(s)	298, 508, 654, 955, 998, 1339
TaiI	ACGT	4 cut(s)	598, 873, 930, 1254
TaqI	TCGA	4 cut(s)	324, 1062, 1066, 1130
TasI	AATT	9 cut(s)	78, 228, 326, 582, 764, 833, 1132, 1146, 1266
TauI	GCSGC	2 cut(s)	551, 665
TfiI	GAWTC	2 cut(s)	197, 455
Tru1I	TTAA	2 cut(s)	1053, 1381
Tru9I	TTAA	2 cut(s)	1053, 1381
TscAI	CASTG	3 cut(s)	223, 940, 958
TseFI	GTSAC	5 cut(s)	86, 946, 1044, 1198, 1270
TseI	GCWGC	7 cut(s)	560, 563, 572, 575, 659, 788, 1010
Tsp45I	GTSAC	5 cut(s)	86, 946, 1044, 1198, 1270
TspDTI	ATGAA	5 cut(s)	502, 702, 826, 834, 1296
TspMI	CCCGGG	1 cut(s)	532
TspRI	CASTG	3 cut(s)	223, 940, 958
Van91I	CCANNNNNTGG	1 cut(s)	181
VpaK11BI	GGWCC	2 cut(s)	504, 1308
XapI	RAATTY	4 cut(s)	326, 764, 833, 1146
XceI	RCATGY	2 cut(s)	827, 1206
XmaI	CCCGGG	1 cut(s)	532
XmiI	GTMKAC	1 cut(s)	22
XspI	CTAG	4 cut(s)	206, 1049, 1070, 1355
Zsp2I	ATGCAT	1 cut(s)	825

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.