Rmu_sc0001753.1_g000044

Endoglucanase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001753.1
Physical Location & Seq
Forward (+)
206514 .. 209374
2861 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001753.1_g000044.1.cds

Sequence Viewer

Length: 2028 bp
atgatgatgtctgtgcagagcagcagacgggtctttggtttggttattggaccattatctatgcttttattgttccaaggaattgcttgtgaagcagactatactcaagcacttgccaagtcattgttgtattatgagggtcaacgctcagggaagttgccccctattggcaaactccagagagtggcgtggcgaggagattccggactagaagacggcagtgatgctggaattgatttggtgggaggctactacgatgccggagacaacctcaagttgggatttccaatggccttctcagtaacaatgctgtcatggagcacgatcgaattccaaagcaagctcaaggcgaaatatgagatcgccaatgctcttcgggctatcaagtggggaacagattacttgataaaagcacatccacagcccgaagtgctttatgggcatattgggggtgttgattcagaccatcaatgttggcagagaccagaggacatgaccaccccgaggaccgtgttcatgattgatgaccaacacccgggatctgatctcgccgctgaaactgctgctgctttggctgctgcctcaattgcttttgaacgatttgatagaagttactcatcccaactcgtaactcatgcaaagcagctatttgattttgcacgcaatcatcctggtacgtatcaaaacagcatccctgaggcaggaaaagtctacgccagtagtgggtatcaggacgagatgctgtgggcagcggcatggctccatcgtgctactaatgaacagaagtacctcaacttcctaagcgaagcgggagatataggtggaacaagaacaacattctcatgggatgacaaattcgtcggcgcacaggttttggcagcaatgcttgtaatgaagggaaaggttgattcttcaggaaaatggggggagtataagcgccatgcagaggaattcatatgttcatgcgttcagaaaggaaacaacaacgtgaagaagacacccggaggcttgctttggtttctgccatggaataacaatcaatacgttgccactgctacatttgtcaccactgtttattccgtttatttggacgcaaaaaaagcctccatcaactgtcctggtggcgctgctcacccctttgatctcattgcatctgccaagtcacagatggattacatcttgggctcaaacccgaaaaacatgagctatatggttggatatggatcgaattatccgaagcaaattcatcacagaggagcatcaatcgtctcaatcaagaaggatccagctcctgtgacatgccaaggtgggtttgactggtttcacagacccgagcccaacccgaacgtgctggagggagcaattgtgaccccagacgaaaatgatggttttgcggacgacaggaacaactttcagttagctgaaccaacgacccttgtaatgaagggaaaggttgattcttcaggaaaatggggggagtataagcgccatgcagaggaattcatatgttcatgcgttcagaaaggaaacaacaacgtgaagaagacagccggaggcttgctttggtttctaccatggaataacaatcaatacgttgccactgctacatttgtcaccactgtttattccgtttatttggacgcgaaaaaagcctccatcaactgtcctggtggcgctgctcacccctctgatctcattgcatctgccaagtcacagatggattacatcttgggctcaaacccgaaaaacatgagctatatggttggatatggatcgaattatccgaagcaaattcatcacagaggagcatcaatcgtctcaatcaagaaggatccagctcctgtgacatgccaaggtgggtttgactggtttcacagacccgagcccaacccgaacgtgctggagggagcaattgtgaccccagatgaaaatgatggttttgcggacgacaggaacaactttcagttagctgaaccaacgaccgttactaatgctccactagttggtgtcttagctcaccttgcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

675

Amino Acids

74.12

Weight (kDa)

6.42

Isoelectric Point (pI)

30.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 857
AccB7I CCANNNNNTGG 2 cut(s) 184, 2003
AccI GTMKAC 1 cut(s) 711
AccII CGCG 1 cut(s) 1643
AccIII TCCGGA 1 cut(s) 203
AciI CCGC 5 cut(s) 552, 752, 809, 1394, 1943
AclWI GGATC 7 cut(s) 547, 1231, 1277, 1290, 1780, 1826, 1839
AcsI RAATTY 6 cut(s) 329, 854, 950, 1242, 1499, 1791
AcuI CTGAAG 2 cut(s) 897, 1446
AfaI GTAC 2 cut(s) 676, 788
AgsI TTSAA 1 cut(s) 596
AhlI ACTAGT 1 cut(s) 1999
AjnI CCWGG 3 cut(s) 670, 1117, 1666
AluBI AGCT 9 cut(s) 343, 646, 1206, 1289, 1421, 1755, 1838, 1970, 2015
AluI AGCT 9 cut(s) 343, 646, 1206, 1289, 1421, 1755, 1838, 1970, 2015
Alw21I GWGCWC 1 cut(s) 323
Alw26I GTCTC 4 cut(s) 258, 475, 1273, 1822
AlwI GGATC 7 cut(s) 547, 1231, 1277, 1290, 1780, 1826, 1839
AlwNI CAGNNNCTG 2 cut(s) 1292, 1841
Ama87I CYCGRG 4 cut(s) 502, 535, 1331, 1880
Aor13HI TCCGGA 1 cut(s) 203
AoxI GGCC 1 cut(s) 291
ApoI RAATTY 6 cut(s) 329, 854, 950, 1242, 1499, 1791
AspLEI GCGC 5 cut(s) 866, 939, 1127, 1488, 1676
AspS9I GGNCC 2 cut(s) 50, 507
AsuC2I CCSGG 3 cut(s) 536, 537, 1002
AsuHPI GGTGA 5 cut(s) 1057, 1124, 1606, 1673, 2009
AvaI CYCGRG 4 cut(s) 502, 535, 1331, 1880
AvaII GGWCC 2 cut(s) 50, 507
AxyI CCTNAGG 1 cut(s) 696
BaeI ACNNNNGTAYC 2 cut(s) 770, 803
BamHI GGATCC 2 cut(s) 1282, 1831
BanII GRGCYC 4 cut(s) 1187, 1338, 1736, 1887
BarI GAAGNNNNNNTAC 2 cut(s) 779, 811
BbsI GAAGAC 3 cut(s) 219, 1001, 1550
Bbv12I GWGCWC 1 cut(s) 323
BccI CCATC 8 cut(s) 474, 771, 1115, 1162, 1379, 1664, 1711, 1928
BceAI ACGGC 1 cut(s) 232
BciT130I CCWGG 3 cut(s) 672, 1119, 1668
BcnI CCSGG 3 cut(s) 536, 537, 1002
BcoDI GTCTC 4 cut(s) 258, 475, 1273, 1822
BcuI ACTAGT 1 cut(s) 1999
BfaI CTAG 2 cut(s) 209, 2000
BfoI RGCGCY 4 cut(s) 940, 1128, 1489, 1677
Bme1390I CCNGG 6 cut(s) 536, 537, 672, 1002, 1119, 1668
Bme18I GGWCC 2 cut(s) 50, 507
BmeT110I CYCGRG 4 cut(s) 502, 535, 1331, 1880
BmgT120I GGNCC 2 cut(s) 50, 507
BmiI GGNNCC 3 cut(s) 761, 1284, 1833
BmrFI CCNGG 6 cut(s) 536, 537, 672, 1002, 1119, 1668
BmsI GCATC 8 cut(s) 214, 247, 699, 729, 1160, 1268, 1709, 1817
BpiI GAAGAC 3 cut(s) 219, 1001, 1550
BplI GAGNNNNNCTC 2 cut(s) 255, 287
BpmI CTGGAG 3 cut(s) 161, 1373, 1922
Bpu10I CCTNAGC 2 cut(s) 148, 800
BpuEI CTTGAG 3 cut(s) 90, 257, 329
BpuMI CCSGG 3 cut(s) 536, 537, 1002
BsaAI YACGTR 1 cut(s) 678
BsaBI GATNNNNATC 2 cut(s) 1222, 1771
BsaI GGTCTC 1 cut(s) 475
BsaJI CCNNGG 7 cut(s) 76, 503, 535, 1025, 1303, 1574, 1852
BsaWI WCCGGW 1 cut(s) 203
BsaXI ACNNNNNCTCC 6 cut(s) 1350, 1380, 1899, 1929, 1978, 2008
Bse1I ACTGG 3 cut(s) 717, 1322, 1871
Bse21I CCTNAGG 1 cut(s) 696
Bse3DI GCAATG 3 cut(s) 888, 1146, 1695
Bse8I GATNNNNATC 2 cut(s) 1222, 1771
BseAI TCCGGA 1 cut(s) 203
BseBI CCWGG 3 cut(s) 672, 1119, 1668
BseDI CCNNGG 7 cut(s) 76, 503, 535, 1025, 1303, 1574, 1852
BseGI GGATG 5 cut(s) 415, 617, 667, 690, 853
BseJI GATNNNNATC 2 cut(s) 1222, 1771
BseMI GCAATG 3 cut(s) 888, 1146, 1695
BseMII CTCAG 3 cut(s) 162, 312, 687
BseNI ACTGG 3 cut(s) 717, 1322, 1871
BseRI GAGGAG 3 cut(s) 210, 1269, 1818
BsgI GTGCAG 1 cut(s) 35
Bsh1236I CGCG 1 cut(s) 1643
Bsh1285I CGRYCG 2 cut(s) 327, 1983
BshFI GGCC 1 cut(s) 293
BsiEI CGRYCG 2 cut(s) 327, 1983
BsiHKAI GWGCWC 1 cut(s) 323
BsiHKCI CYCGRG 4 cut(s) 502, 535, 1331, 1880
BsiSI CCGG 5 cut(s) 204, 261, 536, 1002, 1551
BsmAI GTCTC 4 cut(s) 258, 475, 1273, 1822
BsmBI CGTCTC 2 cut(s) 1273, 1822
BsnI GGCC 1 cut(s) 293
Bso31I GGTCTC 1 cut(s) 475
BsoBI CYCGRG 4 cut(s) 502, 535, 1331, 1880
Bsp1286I GDGCHC 5 cut(s) 323, 1187, 1338, 1736, 1887
Bsp13I TCCGGA 1 cut(s) 203
Bsp19I CCATGG 2 cut(s) 1025, 1574
BspACI CCGC 5 cut(s) 552, 752, 809, 1394, 1943
BspANI GGCC 1 cut(s) 293
BspCNI CTCAG 3 cut(s) 161, 311, 688
BspEI TCCGGA 1 cut(s) 203
BspFNI CGCG 1 cut(s) 1643
BspHI TCATGA 1 cut(s) 516
BspLI GGNNCC 3 cut(s) 761, 1284, 1833
BspPI GGATC 7 cut(s) 547, 1231, 1277, 1290, 1780, 1826, 1839
BspQI GCTCTTC 1 cut(s) 378
BspTNI GGTCTC 1 cut(s) 475
BsrDI GCAATG 3 cut(s) 888, 1146, 1695
BsrI ACTGG 3 cut(s) 717, 1322, 1871
BssECI CCNNGG 7 cut(s) 76, 503, 535, 1025, 1303, 1574, 1852
BssT1I CCWWGG 5 cut(s) 76, 1025, 1303, 1574, 1852
Bst2UI CCWGG 3 cut(s) 672, 1119, 1668
Bst4CI ACNGT 6 cut(s) 511, 1072, 1115, 1621, 1664, 1984
Bst6I CTCTTC 1 cut(s) 378
BstBAI YACGTR 1 cut(s) 678
BstC8I GCNNGC 4 cut(s) 341, 661, 1010, 1559
BstDEI CTNAG 5 cut(s) 148, 298, 696, 800, 2011
BstDSI CCRYGG 2 cut(s) 1025, 1574
BstENI CCTNNNNNAGG 1 cut(s) 699
BstF5I GGATG 5 cut(s) 415, 617, 667, 690, 853
BstFNI CGCG 1 cut(s) 1643
BstH2I RGCGCY 4 cut(s) 940, 1128, 1489, 1677
BstHHI GCGC 5 cut(s) 866, 939, 1127, 1488, 1676
BstMAI GTCTC 4 cut(s) 258, 475, 1273, 1822
BstMCI CGRYCG 2 cut(s) 327, 1983
BstNI CCWGG 3 cut(s) 672, 1119, 1668
BstNSI RCATGY 2 cut(s) 1302, 1851
BstSCI CCNGG 6 cut(s) 534, 535, 670, 1000, 1117, 1666
BstSNI TACGTA 1 cut(s) 678
BstUI CGCG 1 cut(s) 1643
BstV2I GAAGAC 3 cut(s) 219, 1001, 1550
BstX2I RGATCY 3 cut(s) 539, 1282, 1831
BstYI RGATCY 3 cut(s) 539, 1282, 1831
Bsu36I CCTNAGG 1 cut(s) 696
BsuRI GGCC 1 cut(s) 293
BtgI CCRYGG 2 cut(s) 1025, 1574
BtsCI GGATG 5 cut(s) 415, 617, 667, 690, 853
BtsI GCAGTG 3 cut(s) 226, 1050, 1599
BtsIMutI CAGTG 5 cut(s) 226, 1050, 1068, 1599, 1617
Cac8I GCNNGC 4 cut(s) 341, 661, 1010, 1559
CaiI CAGNNNCTG 2 cut(s) 1292, 1841
CciI TCATGA 1 cut(s) 516
CfoI GCGC 5 cut(s) 866, 939, 1127, 1488, 1676
Cfr13I GGNCC 2 cut(s) 50, 507
Cfr9I CCCGGG 1 cut(s) 535
CseI GACGC 2 cut(s) 1100, 1649
Csp6I GTAC 2 cut(s) 675, 787
CviQI GTAC 2 cut(s) 675, 787
DdeI CTNAG 5 cut(s) 148, 298, 696, 800, 2011
DrdI GACNNNNNNGTC 1 cut(s) 857
DseDI GACNNNNNNGTC 1 cut(s) 857
Eam1104I CTCTTC 1 cut(s) 378
EarI CTCTTC 1 cut(s) 378
Eco105I TACGTA 1 cut(s) 678
Eco130I CCWWGG 5 cut(s) 76, 1025, 1303, 1574, 1852
Eco24I GRGCYC 4 cut(s) 1187, 1338, 1736, 1887
Eco31I GGTCTC 1 cut(s) 475
Eco47I GGWCC 2 cut(s) 50, 507
Eco57I CTGAAG 2 cut(s) 897, 1446
Eco81I CCTNAGG 1 cut(s) 696
Eco88I CYCGRG 4 cut(s) 502, 535, 1331, 1880
EcoNI CCTNNNNNAGG 1 cut(s) 699
EcoRI GAATTC 3 cut(s) 329, 950, 1499
EcoRII CCWGG 3 cut(s) 670, 1117, 1666
EcoT14I CCWWGG 5 cut(s) 76, 1025, 1303, 1574, 1852
EcoT38I GRGCYC 4 cut(s) 1187, 1338, 1736, 1887
ErhI CCWWGG 5 cut(s) 76, 1025, 1303, 1574, 1852
Esp3I CGTCTC 2 cut(s) 1273, 1822
FauI CCCGC 1 cut(s) 802
FauNDI CATATG 2 cut(s) 956, 1505
FblI GTMKAC 1 cut(s) 711
FokI GGATG 5 cut(s) 402, 604, 654, 677, 860
FriOI GRGCYC 4 cut(s) 1187, 1338, 1736, 1887
FspBI CTAG 2 cut(s) 209, 2000
GlaI GCGC 5 cut(s) 865, 938, 1126, 1487, 1675
GsuI CTGGAG 3 cut(s) 161, 1373, 1922
HaeII RGCGCY 4 cut(s) 940, 1128, 1489, 1677
HaeIII GGCC 1 cut(s) 293
HapII CCGG 5 cut(s) 204, 261, 536, 1002, 1551
HgaI GACGC 2 cut(s) 1100, 1649
HhaI GCGC 5 cut(s) 866, 939, 1127, 1488, 1676
Hin6I GCGC 5 cut(s) 864, 937, 1125, 1486, 1674
HinP1I GCGC 5 cut(s) 864, 937, 1125, 1486, 1674
HincII GTYRAC 1 cut(s) 143
HindII GTYRAC 1 cut(s) 143
HinfI GANTC 4 cut(s) 200, 458, 908, 1457
HpaII CCGG 5 cut(s) 204, 261, 536, 1002, 1551
HphI GGTGA 5 cut(s) 1057, 1124, 1606, 1673, 2009
Hpy166II GTNNAC 2 cut(s) 143, 712
Hpy188I TCNGA 7 cut(s) 463, 544, 972, 1236, 1521, 1690, 1785
Hpy188III TCNNGA 8 cut(s) 178, 204, 517, 731, 915, 1276, 1464, 1825
Hpy8I GTNNAC 2 cut(s) 143, 712
Hpy99I CGWCG 1 cut(s) 863
HpyAV CCTTC 5 cut(s) 304, 889, 1273, 1438, 1822
HpyCH4III ACNGT 6 cut(s) 511, 1072, 1115, 1621, 1664, 1984
HpyCH4IV ACGT 7 cut(s) 677, 987, 1044, 1347, 1536, 1593, 1896
HpyCH4V TGCA 7 cut(s) 16, 638, 659, 944, 1151, 1493, 1700
HpyF3I CTNAG 5 cut(s) 148, 298, 696, 800, 2011
HpySE526I ACGT 7 cut(s) 677, 987, 1044, 1347, 1536, 1593, 1896
HspAI GCGC 5 cut(s) 864, 937, 1125, 1486, 1674
Kpn2I TCCGGA 1 cut(s) 203
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 9 cut(s) 318, 765, 1256, 1294, 1358, 1805, 1843, 1907, 1999
LweI GCATC 8 cut(s) 214, 247, 699, 729, 1160, 1268, 1709, 1817
MaeI CTAG 2 cut(s) 209, 2000
MaeII ACGT 7 cut(s) 677, 987, 1044, 1347, 1536, 1593, 1896
MboII GAAGA 8 cut(s) 224, 365, 903, 1003, 1006, 1452, 1552, 1555
MfeI CAATTG 3 cut(s) 585, 1362, 1911
MflI RGATCY 3 cut(s) 539, 1282, 1831
MhlI GDGCHC 5 cut(s) 323, 1187, 1338, 1736, 1887
MmeI TCCRAC 2 cut(s) 1195, 1744
MroI TCCGGA 1 cut(s) 203
MseI TTAA 1 cut(s) 2026
MslI CAYNNNNRTG 1 cut(s) 841
MspA1I CMGCKG 2 cut(s) 554, 752
MspI CCGG 5 cut(s) 204, 261, 536, 1002, 1551
MspR9I CCNGG 6 cut(s) 536, 537, 672, 1002, 1119, 1668
MunI CAATTG 3 cut(s) 585, 1362, 1911
MvaI CCWGG 3 cut(s) 672, 1119, 1668
MvnI CGCG 1 cut(s) 1643
NciI CCSGG 3 cut(s) 536, 537, 1002
NcoI CCATGG 2 cut(s) 1025, 1574
NdeI CATATG 2 cut(s) 956, 1505
NlaIV GGNNCC 3 cut(s) 761, 1284, 1833
NmuCI GTSAC 8 cut(s) 1063, 1161, 1294, 1366, 1612, 1710, 1843, 1915
NspI RCATGY 2 cut(s) 1302, 1851
PagI TCATGA 1 cut(s) 516
PciSI GCTCTTC 1 cut(s) 378
PcsI WCGNNNNNNNCGW 2 cut(s) 1232, 1781
PfeI GAWTC 4 cut(s) 200, 458, 908, 1457
PflMI CCANNNNNTGG 2 cut(s) 184, 2003
Ple19I CGATCG 1 cut(s) 327
Ppu21I YACGTR 1 cut(s) 678
Psp6I CCWGG 3 cut(s) 670, 1117, 1666
PspGI CCWGG 3 cut(s) 670, 1117, 1666
PspN4I GGNNCC 3 cut(s) 761, 1284, 1833
PspPI GGNCC 2 cut(s) 50, 507
PstNI CAGNNNCTG 2 cut(s) 1292, 1841
PsuI RGATCY 3 cut(s) 539, 1282, 1831
PvuI CGATCG 1 cut(s) 327
RsaI GTAC 2 cut(s) 676, 788
RsaNI GTAC 2 cut(s) 675, 787
RseI CAYNNNNRTG 1 cut(s) 841
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 1 cut(s) 2026
Sau96I GGNCC 2 cut(s) 50, 507
ScrFI CCNGG 6 cut(s) 536, 537, 672, 1002, 1119, 1668
SduI GDGCHC 5 cut(s) 323, 1187, 1338, 1736, 1887
SfaNI GCATC 8 cut(s) 214, 247, 699, 729, 1160, 1268, 1709, 1817
SinI GGWCC 2 cut(s) 50, 507
SmaI CCCGGG 1 cut(s) 537
SmiMI CAYNNNNRTG 1 cut(s) 841
SmlI CTYRAG 3 cut(s) 105, 272, 344
SmoI CTYRAG 3 cut(s) 105, 272, 344
SnaBI TACGTA 1 cut(s) 678
SpeI ACTAGT 1 cut(s) 1999
SsiI CCGC 5 cut(s) 552, 752, 809, 1394, 1943
SspMI CTAG 2 cut(s) 209, 2000
StyD4I CCNGG 6 cut(s) 534, 535, 670, 1000, 1117, 1666
StyI CCWWGG 5 cut(s) 76, 1025, 1303, 1574, 1852
TaaI ACNGT 6 cut(s) 511, 1072, 1115, 1621, 1664, 1984
TaiI ACGT 7 cut(s) 680, 990, 1047, 1350, 1539, 1596, 1899
TaqI TCGA 3 cut(s) 327, 1226, 1775
TauI GCSGC 2 cut(s) 554, 755
TfiI GAWTC 4 cut(s) 200, 458, 908, 1457
Tru1I TTAA 1 cut(s) 2026
Tru9I TTAA 1 cut(s) 2026
TscAI CASTG 5 cut(s) 226, 1057, 1075, 1606, 1624
TseFI GTSAC 8 cut(s) 1063, 1161, 1294, 1366, 1612, 1710, 1843, 1915
Tsp45I GTSAC 8 cut(s) 1063, 1161, 1294, 1366, 1612, 1710, 1843, 1915
TspGWI ACGGA 2 cut(s) 1069, 1618
TspMI CCCGGG 1 cut(s) 535
TspRI CASTG 5 cut(s) 226, 1057, 1075, 1606, 1624
Van91I CCANNNNNTGG 2 cut(s) 184, 2003
VpaK11BI GGWCC 2 cut(s) 50, 507
XagI CCTNNNNNAGG 1 cut(s) 699
XapI RAATTY 6 cut(s) 329, 854, 950, 1242, 1499, 1791
XceI RCATGY 2 cut(s) 1302, 1851
XcmI CCANNNNNNNNNTGG 2 cut(s) 1165, 1714
XmaI CCCGGG 1 cut(s) 535
XmiI GTMKAC 1 cut(s) 711
XspI CTAG 2 cut(s) 209, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.