Rmu_sc0006993.1_g000010

Endoglucanase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006993.1
Physical Location & Seq
Forward (+)
56192 .. 58783
2592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006993.1_g000010.1.cds

Sequence Viewer

Length: 1536 bp
atggcttctatccatgtccttggtttggtttgcttttctctcattttatcaactcattcagtgcttgcggcaatagattatgagcaagctcttacaaagccgcttgcggcaatagattatgagcaagcttttacaaagtcgcttgcagcaatagattataagcaagctcttacaaagtctttgttgtattttgaggctcaacgatctggtaagttgcctcctgaacagagagtgcaatggcgtggcgattcagcgcttaaagatggaagtgatgctggtgttgatcttaatggagggtattatgatgctggggacaatgtgaagtttggattccccatggcattcacaataacaatgctttcatggagcacaatagagtttgcaagcaaacttgagaccaagaatgagctctccaacgcattggacgccattaaatggggaacagactatttgatcaaagctcaccctcagccaaatgtgctctatggcgaagttggcgatggcggttctgatcatacttgttggcagagaccggaagacatgactaccccacggacatccttcaagatcgatgagcagcatccaggttctgatcttgctggtgaaaccgcagctgcttttgccgcagcttccattgctttcaaggataaagaccctacatattctggccagctcttgacgcatgcaaaacagctgtttgaatttgcccgcagtcatgctggtgtttatcagaatagtattaatgtagcaggccagttctactccagcagcggatatgaggatgaattattgtgggctgcagcatggcttcatcgtgctactgatgataaatcgtacctagattaccttggtcaagcaggcaatactggtggtgcaagaaccatgttctcttgggatgacaagtttgttggcgcccaggtcttggttgcaaagcttgttttggagggcaaggtaccggctgattcaggaccgtggtcacaatacaagaaccaggcagagcagttcatttgctcttgcattcagaagggtaacaacaacgtgaagaagacgcccggtggcttgttatggtttttgccatttaacaatcttcagtatactgcaactgctacactcattgcaactgtttactctgaatacctttccccgaaacgtgcctccattcaatgtagtggtggcattgttcaggctcctgctctacttgacctggcccgatcacaggtggactatatcctgggttcaaatcctaatggtatgagctacatggttggatttgggtcaaagtatccaactcaaattcatcatagaggagcatccattgtttcaatcaagaaagatccatctccagttgcatgccaagctggcttcgacgcttggtttaacaagaacgcccctaatccgaatgtattggatggagcaatagttggaggacccaatgatagtgatggttatacggattcgagatccaacttccaaatggctgaagcagcaactgtcaatactgcaccactagttggtgtcctagccaagcttgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

511

Amino Acids

55.32

Weight (kDa)

5.51

Isoelectric Point (pI)

28.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 159
Acc65I GGTACC 1 cut(s) 952
AccB1I GGYRCC 2 cut(s) 911, 952
AccB7I CCANNNNNTGG 3 cut(s) 435, 922, 1511
AccI GTMKAC 1 cut(s) 1094
AciI CCGC 8 cut(s) 68, 101, 107, 504, 609, 624, 709, 771
AclWI GGATC 2 cut(s) 1328, 1455
AcoI YGGCCR 1 cut(s) 667
AcsI RAATTY 2 cut(s) 701, 1293
AcuI CTGAAG 2 cut(s) 1073, 1500
AcyI GRCGYC 3 cut(s) 426, 912, 1049
AfaI GTAC 2 cut(s) 836, 954
AfeI AGCGCT 1 cut(s) 255
AfiI CCNNNNNNNGG 5 cut(s) 25, 435, 922, 1216, 1511
AgsI TTSAA 6 cut(s) 565, 643, 701, 1163, 1239, 1323
AhlI ACTAGT 1 cut(s) 1507
AjnI CCWGG 5 cut(s) 583, 915, 990, 1203, 1230
Alw21I GWGCWC 3 cut(s) 371, 411, 483
Alw26I GTCTC 2 cut(s) 389, 523
AlwI GGATC 2 cut(s) 1328, 1455
AlwNI CAGNNNCTG 2 cut(s) 590, 1490
Aor51HI AGCGCT 1 cut(s) 255
AoxI GGCC 3 cut(s) 667, 751, 1206
ApeKI GCWGC 9 cut(s) 146, 577, 611, 614, 626, 768, 797, 800, 1484
ApoI RAATTY 2 cut(s) 701, 1293
AseI ATTAAT 1 cut(s) 741
Asp718I GGTACC 1 cut(s) 952
AspLEI GCGC 2 cut(s) 256, 914
AspS9I GGNCC 3 cut(s) 968, 1207, 1427
AsuC2I CCSGG 1 cut(s) 1053
AsuHPI GGTGA 2 cut(s) 455, 614
AvaII GGWCC 2 cut(s) 968, 1427
BalI TGGCCA 1 cut(s) 669
BanI GGYRCC 2 cut(s) 911, 952
BanII GRGCYC 1 cut(s) 411
BbsI GAAGAC 2 cut(s) 543, 1052
Bbv12I GWGCWC 3 cut(s) 371, 411, 483
BbvCI CCTCAGC 1 cut(s) 468
BbvI GCAGC 9 cut(s) 158, 589, 601, 623, 638, 780, 784, 812, 1496
BccI CCATC 5 cut(s) 257, 494, 1345, 1403, 1436
BciT130I CCWGG 5 cut(s) 585, 917, 992, 1205, 1232
BciVI GTATCC 1 cut(s) 1293
BclI TGATCA 2 cut(s) 453, 511
BcnI CCSGG 1 cut(s) 1053
BcoDI GTCTC 2 cut(s) 389, 523
BcuI ACTAGT 1 cut(s) 1507
BfaI CTAG 3 cut(s) 839, 1508, 1520
BfmI CTRYAG 1 cut(s) 798
BfoI RGCGCY 2 cut(s) 257, 915
BfuI GTATCC 1 cut(s) 1293
BglI GCCNNNNNGGC 1 cut(s) 1359
Bme1390I CCNGG 6 cut(s) 585, 917, 992, 1053, 1205, 1232
Bme18I GGWCC 2 cut(s) 968, 1427
BmgT120I GGNCC 3 cut(s) 968, 1207, 1427
BmiI GGNNCC 4 cut(s) 913, 954, 1188, 1429
BmrFI CCNGG 6 cut(s) 585, 917, 992, 1053, 1205, 1232
BmsI GCATC 4 cut(s) 262, 295, 589, 1319
BoxI GACNNNNGTC 1 cut(s) 973
BpiI GAAGAC 2 cut(s) 543, 1052
BpmI CTGGAG 2 cut(s) 748, 1326
Bpu10I CCTNAGC 1 cut(s) 468
BpuEI CTTGAG 1 cut(s) 413
BpuMI CCSGG 1 cut(s) 1053
Bsa29I ATCGAT 1 cut(s) 570
BsaHI GRCGYC 3 cut(s) 426, 912, 1049
BsaI GGTCTC 2 cut(s) 389, 523
BsaJI CCNNGG 7 cut(s) 19, 336, 551, 847, 915, 971, 1231
BsaWI WCCGGW 1 cut(s) 532
BsaXI ACNNNNNCTCC 2 cut(s) 1404, 1434
Bsc4I CCNNNNNNNGG 5 cut(s) 25, 435, 922, 1216, 1511
Bse118I RCCGGY 1 cut(s) 955
Bse1I ACTGG 3 cut(s) 754, 871, 1343
Bse3DI GCAATG 3 cut(s) 242, 633, 1113
BseBI CCWGG 5 cut(s) 585, 917, 992, 1205, 1232
BseCI ATCGAT 1 cut(s) 570
BseDI CCNNGG 7 cut(s) 19, 336, 551, 847, 915, 971, 1231
BseGI GGATG 6 cut(s) 557, 580, 787, 901, 1310, 1414
BseLI CCNNNNNNNGG 5 cut(s) 25, 435, 922, 1216, 1511
BseMI GCAATG 3 cut(s) 242, 633, 1113
BseMII CTCAG 1 cut(s) 482
BseNI ACTGG 3 cut(s) 754, 871, 1343
BseRI GAGGAG 1 cut(s) 1320
BseXI GCAGC 9 cut(s) 158, 589, 601, 623, 638, 780, 784, 812, 1496
BseYI CCCAGC 1 cut(s) 308
BsgI GTGCAG 1 cut(s) 1485
BshFI GGCC 3 cut(s) 669, 753, 1208
BshNI GGYRCC 2 cut(s) 911, 952
BshVI ATCGAT 1 cut(s) 570
BsiHKAI GWGCWC 3 cut(s) 371, 411, 483
BsiSI CCGG 3 cut(s) 533, 956, 1053
BslFI GGGAC 1 cut(s) 326
BslI CCNNNNNNNGG 5 cut(s) 25, 435, 922, 1216, 1511
BsmAI GTCTC 2 cut(s) 389, 523
BsmFI GGGAC 1 cut(s) 326
BsmI GAATGC 2 cut(s) 341, 1017
BsnI GGCC 3 cut(s) 669, 753, 1208
Bso31I GGTCTC 2 cut(s) 389, 523
Bsp1286I GDGCHC 3 cut(s) 371, 411, 483
Bsp143I GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
Bsp19I CCATGG 1 cut(s) 336
BspACI CCGC 8 cut(s) 68, 101, 107, 504, 609, 624, 709, 771
BspANI GGCC 3 cut(s) 669, 753, 1208
BspCNI CTCAG 1 cut(s) 481
BspDI ATCGAT 1 cut(s) 570
BspLI GGNNCC 4 cut(s) 913, 954, 1188, 1429
BspMAI CTGCAG 1 cut(s) 802
BspPI GGATC 2 cut(s) 1328, 1455
BspT107I GGYRCC 2 cut(s) 911, 952
BspTNI GGTCTC 2 cut(s) 389, 523
BsrDI GCAATG 3 cut(s) 242, 633, 1113
BsrFI RCCGGY 1 cut(s) 955
BsrI ACTGG 3 cut(s) 754, 871, 1343
BssAI RCCGGY 1 cut(s) 955
BssECI CCNNGG 7 cut(s) 19, 336, 551, 847, 915, 971, 1231
BssMI GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
BssNAI GTATAC 1 cut(s) 1095
BssNI GRCGYC 3 cut(s) 426, 912, 1049
BssT1I CCWWGG 3 cut(s) 19, 336, 847
Bst1107I GTATAC 1 cut(s) 1095
Bst2UI CCWGG 5 cut(s) 585, 917, 992, 1205, 1232
Bst4CI ACNGT 3 cut(s) 972, 1123, 1492
BstACI GRCGYC 3 cut(s) 426, 912, 1049
BstDEI CTNAG 1 cut(s) 468
BstDSI CCRYGG 3 cut(s) 336, 551, 971
BstF5I GGATG 6 cut(s) 557, 580, 787, 901, 1310, 1414
BstH2I RGCGCY 2 cut(s) 257, 915
BstHHI GCGC 2 cut(s) 256, 914
BstKTI GATC 9 cut(s) 206, 286, 456, 514, 570, 595, 1214, 1336, 1463
BstMAI GTCTC 2 cut(s) 389, 523
BstMBI GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
BstNI CCWGG 5 cut(s) 585, 917, 992, 1205, 1232
BstNSI RCATGY 2 cut(s) 686, 1353
BstPAI GACNNNNGTC 1 cut(s) 973
BstSCI CCNGG 6 cut(s) 583, 915, 990, 1051, 1203, 1230
BstSFI CTRYAG 1 cut(s) 798
BstV1I GCAGC 9 cut(s) 158, 589, 601, 623, 638, 780, 784, 812, 1496
BstV2I GAAGAC 2 cut(s) 543, 1052
BstX2I RGATCY 2 cut(s) 1333, 1460
BstXI CCANNNNNNTGG 2 cut(s) 20, 421
BstYI RGATCY 2 cut(s) 1333, 1460
BstZ17I GTATAC 1 cut(s) 1095
Bsu15I ATCGAT 1 cut(s) 570
BsuI GTATCC 1 cut(s) 1293
BsuRI GGCC 3 cut(s) 669, 753, 1208
BsuTUI ATCGAT 1 cut(s) 570
BtgI CCRYGG 3 cut(s) 336, 551, 971
BtgZI GCGATG 1 cut(s) 513
BtsCI GGATG 6 cut(s) 557, 580, 787, 901, 1310, 1414
BtsIMutI CAGTG 1 cut(s) 66
CaiI CAGNNNCTG 2 cut(s) 590, 1490
CfoI GCGC 2 cut(s) 256, 914
Cfr10I RCCGGY 1 cut(s) 955
Cfr13I GGNCC 3 cut(s) 968, 1207, 1427
ClaI ATCGAT 1 cut(s) 570
CseI GACGC 4 cut(s) 434, 688, 1057, 1376
Csp6I GTAC 2 cut(s) 835, 953
CspCI CAANNNNNGTGG 2 cut(s) 850, 885
CviQI GTAC 2 cut(s) 835, 953
DdeI CTNAG 1 cut(s) 468
DinI GGCGCC 1 cut(s) 913
DpnI GATC 9 cut(s) 205, 285, 455, 513, 569, 594, 1213, 1335, 1462
DpnII GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
EaeI YGGCCR 1 cut(s) 667
Ecl136II GAGCTC 1 cut(s) 409
Eco130I CCWWGG 3 cut(s) 19, 336, 847
Eco24I GRGCYC 1 cut(s) 411
Eco31I GGTCTC 2 cut(s) 389, 523
Eco47I GGWCC 2 cut(s) 968, 1427
Eco47III AGCGCT 1 cut(s) 255
Eco53kI GAGCTC 1 cut(s) 409
Eco57I CTGAAG 2 cut(s) 1073, 1500
EcoICRI GAGCTC 1 cut(s) 409
EcoO109I RGGNCCY 1 cut(s) 1427
EcoRII CCWGG 5 cut(s) 583, 915, 990, 1203, 1230
EcoT14I CCWWGG 3 cut(s) 19, 336, 847
EcoT38I GRGCYC 1 cut(s) 411
EgeI GGCGCC 1 cut(s) 913
EheI GGCGCC 1 cut(s) 913
ErhI CCWWGG 3 cut(s) 19, 336, 847
FaqI GGGAC 1 cut(s) 326
FauI CCCGC 1 cut(s) 716
FbaI TGATCA 2 cut(s) 453, 511
FblI GTMKAC 1 cut(s) 1094
FokI GGATG 6 cut(s) 544, 567, 794, 908, 1297, 1421
FriOI GRGCYC 1 cut(s) 411
FspBI CTAG 3 cut(s) 839, 1508, 1520
GlaI GCGC 2 cut(s) 255, 913
GsaI CCCAGC 1 cut(s) 312
GsuI CTGGAG 2 cut(s) 748, 1326
HaeII RGCGCY 2 cut(s) 257, 915
HaeIII GGCC 3 cut(s) 669, 753, 1208
HapII CCGG 3 cut(s) 533, 956, 1053
HgaI GACGC 4 cut(s) 434, 688, 1057, 1376
HhaI GCGC 2 cut(s) 256, 914
Hin1I GRCGYC 3 cut(s) 426, 912, 1049
Hin6I GCGC 2 cut(s) 254, 912
HinP1I GCGC 2 cut(s) 254, 912
HindIII AAGCTT 3 cut(s) 126, 932, 1526
HinfI GANTC 4 cut(s) 248, 330, 962, 1454
HpaII CCGG 3 cut(s) 533, 956, 1053
HphI GGTGA 2 cut(s) 455, 614
Hpy166II GTNNAC 3 cut(s) 1095, 1126, 1222
Hpy188I TCNGA 6 cut(s) 511, 592, 732, 1023, 1132, 1398
Hpy188III TCNNGA 6 cut(s) 221, 565, 676, 966, 1327, 1458
Hpy8I GTNNAC 3 cut(s) 1095, 1126, 1222
Hpy99I CGWCG 1 cut(s) 1370
HpyAV CCTTC 2 cut(s) 571, 1018
HpyCH4III ACNGT 3 cut(s) 972, 1123, 1492
HpyCH4IV ACGT 2 cut(s) 1038, 1150
HpyF3I CTNAG 1 cut(s) 468
HpySE526I ACGT 2 cut(s) 1038, 1150
Hsp92I GRCGYC 3 cut(s) 426, 912, 1049
HspAI GCGC 2 cut(s) 254, 912
KasI GGCGCC 1 cut(s) 911
KpnI GGTACC 1 cut(s) 956
Ksp22I TGATCA 2 cut(s) 453, 511
Kzo9I GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
LmnI GCTCC 4 cut(s) 366, 1192, 1307, 1412
Lsp1109I GCAGC 9 cut(s) 158, 589, 601, 623, 638, 780, 784, 812, 1496
LweI GCATC 4 cut(s) 262, 295, 589, 1319
MaeI CTAG 3 cut(s) 839, 1508, 1520
MaeII ACGT 2 cut(s) 1038, 1150
MaeIII GTNAC 2 cut(s) 975, 1028
MalI GATC 9 cut(s) 205, 285, 455, 513, 569, 594, 1213, 1335, 1462
MboI GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
MboII GAAGA 4 cut(s) 548, 1054, 1057, 1079
MflI RGATCY 2 cut(s) 1333, 1460
MhlI GDGCHC 3 cut(s) 371, 411, 483
MlsI TGGCCA 1 cut(s) 669
MluCI AATT 3 cut(s) 701, 785, 1293
MluNI TGGCCA 1 cut(s) 669
Mly113I GGCGCC 1 cut(s) 912
MmeI TCCRAC 5 cut(s) 438, 1246, 1310, 1402, 1488
MnlI CCTC 9 cut(s) 187, 228, 287, 477, 772, 937, 1165, 1298, 1418
Mox20I TGGCCA 1 cut(s) 669
MscI TGGCCA 1 cut(s) 669
MseI TTAA 6 cut(s) 258, 288, 432, 741, 1080, 1377
MslI CAYNNNNRTG 1 cut(s) 720
Msp20I TGGCCA 1 cut(s) 669
MspA1I CMGCKG 3 cut(s) 614, 694, 771
MspI CCGG 3 cut(s) 533, 956, 1053
MspR9I CCNGG 6 cut(s) 585, 917, 992, 1053, 1205, 1232
Mva1269I GAATGC 2 cut(s) 341, 1017
MvaI CCWGG 5 cut(s) 585, 917, 992, 1205, 1232
NarI GGCGCC 1 cut(s) 912
NciI CCSGG 1 cut(s) 1053
NcoI CCATGG 1 cut(s) 336
NdeII GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
NlaIV GGNNCC 4 cut(s) 913, 954, 1188, 1429
NmuCI GTSAC 1 cut(s) 975
NspI RCATGY 2 cut(s) 686, 1353
PaeI GCATGC 2 cut(s) 686, 1353
PctI GAATGC 2 cut(s) 341, 1017
PfeI GAWTC 4 cut(s) 248, 330, 962, 1454
PflMI CCANNNNNTGG 3 cut(s) 435, 922, 1511
PluTI GGCGCC 1 cut(s) 915
PpuMI RGGWCCY 1 cut(s) 1427
PshAI GACNNNNGTC 1 cut(s) 973
PshBI ATTAAT 1 cut(s) 741
PsiI TTATAA 1 cut(s) 159
Psp124BI GAGCTC 1 cut(s) 411
Psp5II RGGWCCY 1 cut(s) 1427
Psp6I CCWGG 5 cut(s) 583, 915, 990, 1203, 1230
PspFI CCCAGC 1 cut(s) 308
PspGI CCWGG 5 cut(s) 583, 915, 990, 1203, 1230
PspN4I GGNNCC 4 cut(s) 913, 954, 1188, 1429
PspPI GGNCC 3 cut(s) 968, 1207, 1427
PspPPI RGGWCCY 1 cut(s) 1427
PstI CTGCAG 1 cut(s) 802
PstNI CAGNNNCTG 2 cut(s) 590, 1490
PsuI RGATCY 2 cut(s) 1333, 1460
PvuII CAGCTG 2 cut(s) 614, 694
RsaI GTAC 2 cut(s) 836, 954
RsaNI GTAC 2 cut(s) 835, 953
RseI CAYNNNNRTG 1 cut(s) 720
SacI GAGCTC 1 cut(s) 411
SaqAI TTAA 6 cut(s) 258, 288, 432, 741, 1080, 1377
Sau3AI GATC 9 cut(s) 203, 283, 453, 511, 567, 592, 1211, 1333, 1460
Sau96I GGNCC 3 cut(s) 968, 1207, 1427
ScrFI CCNGG 6 cut(s) 585, 917, 992, 1053, 1205, 1232
SduI GDGCHC 3 cut(s) 371, 411, 483
SfaNI GCATC 4 cut(s) 262, 295, 589, 1319
SfcI CTRYAG 1 cut(s) 798
SfoI GGCGCC 1 cut(s) 913
SinI GGWCC 2 cut(s) 968, 1427
SmiMI CAYNNNNRTG 1 cut(s) 720
SmlI CTYRAG 1 cut(s) 392
SmoI CTYRAG 1 cut(s) 392
SpeI ACTAGT 1 cut(s) 1507
SphI GCATGC 2 cut(s) 686, 1353
Sse9I AATT 3 cut(s) 701, 785, 1293
SsiI CCGC 8 cut(s) 68, 101, 107, 504, 609, 624, 709, 771
SspDI GGCGCC 1 cut(s) 911
SspMI CTAG 3 cut(s) 839, 1508, 1520
SstI GAGCTC 1 cut(s) 411
StyD4I CCNGG 6 cut(s) 583, 915, 990, 1051, 1203, 1230
StyI CCWWGG 3 cut(s) 19, 336, 847
TaaI ACNGT 3 cut(s) 972, 1123, 1492
TaiI ACGT 2 cut(s) 1041, 1153
TaqI TCGA 3 cut(s) 570, 1365, 1457
TasI AATT 3 cut(s) 701, 785, 1293
TauI GCSGC 4 cut(s) 71, 103, 110, 626
TfiI GAWTC 4 cut(s) 248, 330, 962, 1454
Tru1I TTAA 6 cut(s) 258, 288, 432, 741, 1080, 1377
Tru9I TTAA 6 cut(s) 258, 288, 432, 741, 1080, 1377
TscAI CASTG 1 cut(s) 66
TseFI GTSAC 1 cut(s) 975
TseI GCWGC 9 cut(s) 146, 577, 611, 614, 626, 768, 797, 800, 1484
Tsp45I GTSAC 1 cut(s) 975
TspDTI ATGAA 5 cut(s) 351, 798, 800, 994, 1286
TspGWI ACGGA 2 cut(s) 568, 1466
TspRI CASTG 1 cut(s) 66
Van91I CCANNNNNTGG 3 cut(s) 435, 922, 1511
VpaK11BI GGWCC 2 cut(s) 968, 1427
VspI ATTAAT 1 cut(s) 741
XapI RAATTY 2 cut(s) 701, 1293
XceI RCATGY 2 cut(s) 686, 1353
XcmI CCANNNNNNNNNTGG 1 cut(s) 1471
XmiI GTMKAC 1 cut(s) 1094
XspI CTAG 3 cut(s) 839, 1508, 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.