RLG00000031447

FAD-dependent monooxygenase required for the C5-ring hydroxylation during ubiquinone biosynthesis. Catalyzes the hydroxylation of 3-polyprenyl-4-hydroxybenzoic acid to 3- polyprenyl-4,5-dihydroxybenzoic acid. The electrons required for the hydroxylation reaction may be funneled indirectly from NADPH via a ferredoxin ferredoxin reductase system to COQ6

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Reverse (-)
5249069 .. 5251588
2520 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000031447

Sequence Viewer

Length: 318 bp
ATGAGAAATCGAACAGTTACTGGGAAGCAGAGTTGCCTCATAGTTATGACAGAGTTGGAATTGAGAATTTCATCCATGCAAAGTGTTTGGGTGCTCATGTTATCCATTAGGTATGAATCAAAGAAAACTTCTGTTTATGGAGCAAGGCGTGAAATTAGAAGCAATCATGGTGATGTCAAAGATATTGAACGGTCTTATGAGAAGCAGAAAGATCATGTGGGGCAGCAGAAATCTTCAAATAAAAGTGAACCGTATGACATTGCTATTGTTGGATGTGGCATGGTTGGCATGGCCCTTGCTTGTTCCTTGGATAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

106

Amino Acids

11.91

Weight (kDa)

9.3

Isoelectric Point (pI)

57.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 66
AfiI CCNNNNNNNGG 1 cut(s) 312
AgsI TTSAA 2 cut(s) 188, 237
Alw21I GWGCWC 1 cut(s) 96
AlwNI CAGNNNCTG 1 cut(s) 20
AoxI GGCC 1 cut(s) 291
ApeKI GCWGC 1 cut(s) 223
ApoI RAATTY 1 cut(s) 66
AspS9I GGNCC 1 cut(s) 292
AsuHPI GGTGA 1 cut(s) 182
Bbv12I GWGCWC 1 cut(s) 96
BbvI GCAGC 1 cut(s) 235
BisI GCNGC 1 cut(s) 224
BlsI GCNGC 1 cut(s) 225
BmgT120I GGNCC 1 cut(s) 292
BmrI ACTGGG 1 cut(s) 30
BmuI ACTGGG 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 306
Bsc4I CCNNNNNNNGG 1 cut(s) 312
Bse1I ACTGG 1 cut(s) 25
Bse3DI GCAATG 1 cut(s) 258
BseDI CCNNGG 1 cut(s) 306
BseGI GGATG 2 cut(s) 71, 278
BseLI CCNNNNNNNGG 1 cut(s) 312
BseMI GCAATG 1 cut(s) 258
BseNI ACTGG 1 cut(s) 25
BseXI GCAGC 1 cut(s) 235
BshFI GGCC 1 cut(s) 293
BsiHKAI GWGCWC 1 cut(s) 96
BslI CCNNNNNNNGG 1 cut(s) 312
BsnI GGCC 1 cut(s) 293
Bsp1286I GDGCHC 1 cut(s) 96
Bsp143I GATC 1 cut(s) 211
BspANI GGCC 1 cut(s) 293
BsrDI GCAATG 1 cut(s) 258
BsrI ACTGG 1 cut(s) 25
BssECI CCNNGG 1 cut(s) 306
BssMI GATC 1 cut(s) 211
BssT1I CCWWGG 1 cut(s) 306
Bst4CI ACNGT 3 cut(s) 16, 192, 252
BstENI CCTNNNNNAGG 1 cut(s) 310
BstF5I GGATG 2 cut(s) 71, 278
BstKTI GATC 1 cut(s) 214
BstMBI GATC 1 cut(s) 211
BstMWI GCNNNNNNNGC 1 cut(s) 285
BstV1I GCAGC 1 cut(s) 235
BsuRI GGCC 1 cut(s) 293
BtsCI GGATG 2 cut(s) 71, 278
CaiI CAGNNNCTG 1 cut(s) 20
Cfr13I GGNCC 1 cut(s) 292
CviAII CATG 6 cut(s) 76, 97, 167, 215, 280, 289
CviJI RGCY 1 cut(s) 293
CviKI_1 RGCY 1 cut(s) 293
DpnI GATC 1 cut(s) 213
DpnII GATC 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 306
EcoNI CCTNNNNNAGG 1 cut(s) 310
EcoT14I CCWWGG 1 cut(s) 306
ErhI CCWWGG 1 cut(s) 306
FaeI CATG 6 cut(s) 79, 100, 170, 218, 283, 292
FatI CATG 6 cut(s) 75, 96, 166, 214, 279, 288
Fnu4HI GCNGC 1 cut(s) 224
FokI GGATG 2 cut(s) 58, 285
Fsp4HI GCNGC 1 cut(s) 224
GluI GCNGC 1 cut(s) 224
HaeIII GGCC 1 cut(s) 293
Hin1II CATG 6 cut(s) 79, 100, 170, 218, 283, 292
HinfI GANTC 1 cut(s) 116
HphI GGTGA 1 cut(s) 182
Hpy166II GTNNAC 1 cut(s) 248
Hpy8I GTNNAC 1 cut(s) 248
HpyCH4III ACNGT 3 cut(s) 16, 192, 252
HpyCH4V TGCA 1 cut(s) 79
HpyF10VI GCNNNNNNNGC 1 cut(s) 285
Hsp92II CATG 6 cut(s) 79, 100, 170, 218, 283, 292
Kzo9I GATC 1 cut(s) 211
LmnI GCTCC 1 cut(s) 140
LpnPI CCDG 1 cut(s) 6
Lsp1109I GCAGC 1 cut(s) 235
MaeIII GTNAC 1 cut(s) 16
MalI GATC 1 cut(s) 213
MboI GATC 1 cut(s) 211
MboII GAAGA 1 cut(s) 225
MhlI GDGCHC 1 cut(s) 96
MluCI AATT 3 cut(s) 59, 66, 153
MmeI TCCRAC 2 cut(s) 36, 250
MnlI CCTC 1 cut(s) 47
MslI CAYNNNNRTG 2 cut(s) 44, 171
MwoI GCNNNNNNNGC 1 cut(s) 285
NdeII GATC 1 cut(s) 211
NlaIII CATG 6 cut(s) 79, 100, 170, 218, 283, 292
PfeI GAWTC 1 cut(s) 116
PkrI GCNGC 1 cut(s) 225
PspPI GGNCC 1 cut(s) 292
PstNI CAGNNNCTG 1 cut(s) 20
RseI CAYNNNNRTG 2 cut(s) 44, 171
SatI GCNGC 1 cut(s) 224
Sau3AI GATC 1 cut(s) 211
Sau96I GGNCC 1 cut(s) 292
SduI GDGCHC 1 cut(s) 96
SetI ASST 2 cut(s) 113, 317
SmiMI CAYNNNNRTG 2 cut(s) 44, 171
Sse9I AATT 3 cut(s) 59, 66, 153
StyI CCWWGG 1 cut(s) 306
TaaI ACNGT 3 cut(s) 16, 192, 252
TaqI TCGA 1 cut(s) 10
TasI AATT 3 cut(s) 59, 66, 153
TfiI GAWTC 1 cut(s) 116
TseI GCWGC 1 cut(s) 223
TspDTI ATGAA 2 cut(s) 60, 129
XagI CCTNNNNNAGG 1 cut(s) 310
XapI RAATTY 1 cut(s) 66
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.