Rmu_co8259759.1_g000001

Purple acid phosphatase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8259759.1
Physical Location & Seq
Reverse (-)
325 .. 675
351 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8259759.1_g000001.1.cds

Sequence Viewer

Length: 351 bp
ctgtacaaattcattgagaaatgccttgcatcggctgacaggcagaaacaaccttggctgattttcgctgctcatcgcgttcttggttattcctcggcttattggaatgatggttcttttggagaaccaatggcaagggaaaacttacaaaagctttggcagaagtgcaaggtggacattgcatttttcggccatatccacaactatgaaagaacatgcccaatttatcagaaccagtgtgtgaactcggaaacatctcattattccggaactgtgaatggaacaatccatgcagttgttggtggaggagctagggagccacttatcaggtttcggaccagtgcagtgtaa
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

116

Amino Acids

13.2

Weight (kDa)

8.99

Isoelectric Point (pI)

36.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 78
AccIII TCCGGA 1 cut(s) 266
AcoI YGGCCR 1 cut(s) 190
AcsI RAATTY 1 cut(s) 8
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 1 cut(s) 31
AloI GAACNNNNNNTCC 2 cut(s) 97, 129
AluBI AGCT 2 cut(s) 154, 311
AluI AGCT 2 cut(s) 154, 311
Aor13HI TCCGGA 1 cut(s) 266
AoxI GGCC 1 cut(s) 190
ApeKI GCWGC 1 cut(s) 68
ApoI RAATTY 1 cut(s) 8
AspS9I GGNCC 1 cut(s) 336
AvaII GGWCC 1 cut(s) 336
BbvI GCAGC 1 cut(s) 55
BccI CCATC 1 cut(s) 104
BfaI CTAG 1 cut(s) 312
BisI GCNGC 1 cut(s) 69
BlsI GCNGC 1 cut(s) 70
Bme18I GGWCC 1 cut(s) 336
BmgT120I GGNCC 1 cut(s) 336
BmiI GGNNCC 1 cut(s) 318
BmsI GCATC 1 cut(s) 38
BsaJI CCNNGG 2 cut(s) 53, 93
BsaWI WCCGGW 1 cut(s) 266
Bsc4I CCNNNNNNNGG 1 cut(s) 31
Bse1I ACTGG 2 cut(s) 235, 339
Bse3DI GCAATG 1 cut(s) 177
BseAI TCCGGA 1 cut(s) 266
BseDI CCNNGG 2 cut(s) 53, 93
BseLI CCNNNNNNNGG 1 cut(s) 31
BseMI GCAATG 1 cut(s) 177
BseNI ACTGG 2 cut(s) 235, 339
BseRI GAGGAG 1 cut(s) 321
BseXI GCAGC 1 cut(s) 55
Bsh1236I CGCG 1 cut(s) 78
BshFI GGCC 1 cut(s) 192
BsiSI CCGG 1 cut(s) 267
BslI CCNNNNNNNGG 1 cut(s) 31
BsnI GGCC 1 cut(s) 192
Bsp13I TCCGGA 1 cut(s) 266
Bsp1407I TGTACA 1 cut(s) 3
BspANI GGCC 1 cut(s) 192
BspEI TCCGGA 1 cut(s) 266
BspFNI CGCG 1 cut(s) 78
BspLI GGNNCC 1 cut(s) 318
BsrDI GCAATG 1 cut(s) 177
BsrGI TGTACA 1 cut(s) 3
BsrI ACTGG 2 cut(s) 235, 339
BssECI CCNNGG 2 cut(s) 53, 93
BssT1I CCWWGG 1 cut(s) 53
Bst4CI ACNGT 1 cut(s) 274
BstAUI TGTACA 1 cut(s) 3
BstFNI CGCG 1 cut(s) 78
BstNSI RCATGY 1 cut(s) 219
BstUI CGCG 1 cut(s) 78
BstV1I GCAGC 1 cut(s) 55
BsuRI GGCC 1 cut(s) 192
BtgZI GCGATG 1 cut(s) 59
BtsI GCAGTG 1 cut(s) 351
BtsIMutI CAGTG 3 cut(s) 242, 346, 351
Cfr13I GGNCC 1 cut(s) 336
Csp6I GTAC 1 cut(s) 4
CviAII CATG 2 cut(s) 216, 290
CviJI RGCY 7 cut(s) 35, 58, 98, 154, 192, 311, 319
CviKI_1 RGCY 7 cut(s) 35, 58, 98, 154, 192, 311, 319
CviQI GTAC 1 cut(s) 4
EaeI YGGCCR 1 cut(s) 190
Eco130I CCWWGG 1 cut(s) 53
Eco47I GGWCC 1 cut(s) 336
EcoT14I CCWWGG 1 cut(s) 53
ErhI CCWWGG 1 cut(s) 53
FaeI CATG 2 cut(s) 219, 293
FaiI YATR 4 cut(s) 195, 207, 217, 291
FatI CATG 2 cut(s) 215, 289
Fnu4HI GCNGC 1 cut(s) 69
Fsp4HI GCNGC 1 cut(s) 69
FspBI CTAG 1 cut(s) 312
GluI GCNGC 1 cut(s) 69
HaeIII GGCC 1 cut(s) 192
HapII CCGG 1 cut(s) 267
Hin1II CATG 2 cut(s) 219, 293
HindIII AAGCTT 1 cut(s) 152
HpaII CCGG 1 cut(s) 267
Hpy166II GTNNAC 2 cut(s) 175, 244
Hpy188I TCNGA 3 cut(s) 231, 250, 336
Hpy188III TCNNGA 1 cut(s) 267
Hpy8I GTNNAC 2 cut(s) 175, 244
HpyCH4III ACNGT 1 cut(s) 274
HpyCH4V TGCA 5 cut(s) 29, 168, 182, 293, 344
Hsp92II CATG 2 cut(s) 219, 293
Kpn2I TCCGGA 1 cut(s) 266
LmnI GCTCC 2 cut(s) 308, 316
LpnPI CCDG 4 cut(s) 25, 248, 280, 313
Lsp1109I GCAGC 1 cut(s) 55
LweI GCATC 1 cut(s) 38
MaeI CTAG 1 cut(s) 312
MluCI AATT 2 cut(s) 8, 222
MnlI CCTC 2 cut(s) 103, 299
MroI TCCGGA 1 cut(s) 266
MslI CAYNNNNRTG 1 cut(s) 204
MspI CCGG 1 cut(s) 267
MvnI CGCG 1 cut(s) 78
NlaIII CATG 2 cut(s) 219, 293
NlaIV GGNNCC 1 cut(s) 318
NmeAIII GCCGAG 1 cut(s) 74
NspI RCATGY 1 cut(s) 219
PkrI GCNGC 1 cut(s) 70
PspN4I GGNNCC 1 cut(s) 318
PspPI GGNCC 1 cut(s) 336
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
RseI CAYNNNNRTG 1 cut(s) 204
SatI GCNGC 1 cut(s) 69
Sau96I GGNCC 1 cut(s) 336
SetI ASST 5 cut(s) 55, 156, 174, 313, 332
SfaNI GCATC 1 cut(s) 38
SinI GGWCC 1 cut(s) 336
SmiMI CAYNNNNRTG 1 cut(s) 204
Sse9I AATT 2 cut(s) 8, 222
SspMI CTAG 1 cut(s) 312
StyI CCWWGG 1 cut(s) 53
TaaI ACNGT 1 cut(s) 274
TasI AATT 2 cut(s) 8, 222
TatI WGTACW 1 cut(s) 3
TscAI CASTG 3 cut(s) 242, 346, 351
TseI GCWGC 1 cut(s) 68
TspDTI ATGAA 1 cut(s) 222
TspRI CASTG 3 cut(s) 242, 346, 351
VpaK11BI GGWCC 1 cut(s) 336
XapI RAATTY 1 cut(s) 8
XceI RCATGY 1 cut(s) 219
XcmI CCANNNNNNNNNTGG 1 cut(s) 296
XspI CTAG 1 cut(s) 312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.