Rh3AG203600

Purple acid phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0006386
Physical Location & Seq
Forward (+)
20164492 .. 20177927
13436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG203600.1

Sequence Viewer

Length: 357 bp
ATGGATTCAAGTGGAGAATGTGGTGTGCTTGTTGAGACCATGTTTTACATTCCAGCAAAAACTGAGCTAACGATTGCTGACACAGAACATGACTGGAGAGAGAGAACAGAGCAATACAAGTTCTTTGAGAATTGCCTTGCATTCGGGGATCGACAAAAGAGCATGTTCACCGGTACCCATTTAGGCTGGTCTTCAGCAAGGCTTGGTGAGGTGGTGACCGACATGGTCCTTCAATCACCTTCCAACAGAAAATTTATCACTAACATGAAAGTTGCCCGTAGTGACCCAAGTCACAAAGAAGGCCAAAAAATTGACCCAGAAACTGACCTAGGCAAACTGGTTGCCAGCTCGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

118

Amino Acids

13.27

Weight (kDa)

5.33

Isoelectric Point (pI)

44.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 173
AccB1I GGYRCC 1 cut(s) 173
AclWI GGATC 1 cut(s) 156
AcsI RAATTY 1 cut(s) 251
AcuI CTGAAG 1 cut(s) 177
AfaI GTAC 1 cut(s) 175
AgeI ACCGGT 1 cut(s) 170
AgsI TTSAA 2 cut(s) 9, 233
AluBI AGCT 2 cut(s) 67, 348
AluI AGCT 2 cut(s) 67, 348
Alw26I GTCTC 1 cut(s) 29
AlwI GGATC 1 cut(s) 156
AlwNI CAGNNNCTG 1 cut(s) 323
AoxI GGCC 2 cut(s) 301, 351
ApoI RAATTY 1 cut(s) 251
AsiGI ACCGGT 1 cut(s) 170
Asp718I GGTACC 1 cut(s) 173
AspA2I CCTAGG 1 cut(s) 328
AspS9I GGNCC 1 cut(s) 226
AsuHPI GGTGA 4 cut(s) 160, 218, 226, 228
AvaII GGWCC 1 cut(s) 226
AvrII CCTAGG 1 cut(s) 328
BanI GGYRCC 1 cut(s) 173
BbsI GAAGAC 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 29
BfaI CTAG 1 cut(s) 329
BglI GCCNNNNNGGC 1 cut(s) 350
BlnI CCTAGG 1 cut(s) 328
Bme18I GGWCC 1 cut(s) 226
BmgT120I GGNCC 1 cut(s) 226
BmiI GGNNCC 1 cut(s) 175
BoxI GACNNNNGTC 1 cut(s) 288
BpiI GAAGAC 1 cut(s) 183
BpmI CTGGAG 1 cut(s) 115
BsaI GGTCTC 1 cut(s) 29
BsaJI CCNNGG 1 cut(s) 328
BsaWI WCCGGW 1 cut(s) 170
Bse118I RCCGGY 1 cut(s) 170
Bse1I ACTGG 2 cut(s) 98, 342
BseDI CCNNGG 1 cut(s) 328
BseMII CTCAG 1 cut(s) 54
BseNI ACTGG 2 cut(s) 98, 342
BshFI GGCC 2 cut(s) 303, 353
BshNI GGYRCC 1 cut(s) 173
BshTI ACCGGT 1 cut(s) 170
BsiSI CCGG 1 cut(s) 171
BsmAI GTCTC 1 cut(s) 29
BsmI GAATGC 1 cut(s) 140
BsnI GGCC 2 cut(s) 303, 353
Bso31I GGTCTC 1 cut(s) 29
Bsp143I GATC 1 cut(s) 148
BspANI GGCC 2 cut(s) 303, 353
BspCNI CTCAG 1 cut(s) 55
BspLI GGNNCC 1 cut(s) 175
BspPI GGATC 1 cut(s) 156
BspT107I GGYRCC 1 cut(s) 173
BspTNI GGTCTC 1 cut(s) 29
BsrFI RCCGGY 1 cut(s) 170
BsrI ACTGG 2 cut(s) 98, 342
BssAI RCCGGY 1 cut(s) 170
BssECI CCNNGG 1 cut(s) 328
BssMI GATC 1 cut(s) 148
BssT1I CCWWGG 1 cut(s) 328
BstC8I GCNNGC 1 cut(s) 346
BstDEI CTNAG 1 cut(s) 63
BstEII GGTNACC 1 cut(s) 214
BstKTI GATC 1 cut(s) 151
BstMAI GTCTC 1 cut(s) 29
BstMBI GATC 1 cut(s) 148
BstMWI GCNNNNNNNGC 1 cut(s) 350
BstNSI RCATGY 1 cut(s) 166
BstPAI GACNNNNGTC 1 cut(s) 288
BstPI GGTNACC 1 cut(s) 214
BstV2I GAAGAC 1 cut(s) 183
BsuRI GGCC 2 cut(s) 303, 353
Cac8I GCNNGC 1 cut(s) 346
CaiI CAGNNNCTG 1 cut(s) 323
Cfr10I RCCGGY 1 cut(s) 170
Cfr13I GGNCC 1 cut(s) 226
Csp6I GTAC 1 cut(s) 174
CspAI ACCGGT 1 cut(s) 170
CviAII CATG 5 cut(s) 40, 89, 163, 223, 265
CviJI RGCY 6 cut(s) 67, 186, 202, 303, 348, 353
CviKI_1 RGCY 6 cut(s) 67, 186, 202, 303, 348, 353
CviQI GTAC 1 cut(s) 174
DdeI CTNAG 1 cut(s) 63
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
Eco130I CCWWGG 1 cut(s) 328
Eco31I GGTCTC 1 cut(s) 29
Eco47I GGWCC 1 cut(s) 226
Eco57I CTGAAG 1 cut(s) 177
Eco91I GGTNACC 1 cut(s) 214
EcoO65I GGTNACC 1 cut(s) 214
EcoT14I CCWWGG 1 cut(s) 328
ErhI CCWWGG 1 cut(s) 328
FaeI CATG 5 cut(s) 43, 92, 166, 226, 268
FaiI YATR 5 cut(s) 41, 90, 164, 224, 266
FatI CATG 5 cut(s) 39, 88, 162, 222, 264
FspBI CTAG 1 cut(s) 329
GsuI CTGGAG 1 cut(s) 115
HaeIII GGCC 2 cut(s) 303, 353
HapII CCGG 1 cut(s) 171
Hin1II CATG 5 cut(s) 43, 92, 166, 226, 268
HinfI GANTC 1 cut(s) 5
HpaII CCGG 1 cut(s) 171
HphI GGTGA 4 cut(s) 160, 218, 226, 228
Hpy166II GTNNAC 1 cut(s) 168
Hpy8I GTNNAC 1 cut(s) 168
HpyAV CCTTC 3 cut(s) 239, 249, 293
HpyCH4V TGCA 1 cut(s) 140
HpyF10VI GCNNNNNNNGC 1 cut(s) 350
HpyF3I CTNAG 1 cut(s) 63
Hsp92II CATG 5 cut(s) 43, 92, 166, 226, 268
KpnI GGTACC 1 cut(s) 177
Kzo9I GATC 1 cut(s) 148
LpnPI CCDG 6 cut(s) 66, 79, 172, 184, 323, 330
MaeI CTAG 1 cut(s) 329
MaeIII GTNAC 3 cut(s) 214, 281, 290
MalI GATC 1 cut(s) 150
MboI GATC 1 cut(s) 148
MboII GAAGA 1 cut(s) 183
MluCI AATT 3 cut(s) 130, 251, 309
MmeI TCCRAC 1 cut(s) 267
MnlI CCTC 1 cut(s) 202
MslI CAYNNNNRTG 1 cut(s) 263
MspI CCGG 1 cut(s) 171
Mva1269I GAATGC 1 cut(s) 140
MwoI GCNNNNNNNGC 1 cut(s) 350
NdeII GATC 1 cut(s) 148
NlaIII CATG 5 cut(s) 43, 92, 166, 226, 268
NlaIV GGNNCC 1 cut(s) 175
NmeAIII GCCGAG 1 cut(s) 329
NmuCI GTSAC 3 cut(s) 214, 281, 290
NspI RCATGY 1 cut(s) 166
PctI GAATGC 1 cut(s) 140
PfeI GAWTC 1 cut(s) 5
PflFI GACNNNGTC 1 cut(s) 224
PinAI ACCGGT 1 cut(s) 170
PshAI GACNNNNGTC 1 cut(s) 288
PspEI GGTNACC 1 cut(s) 214
PspN4I GGNNCC 1 cut(s) 175
PspPI GGNCC 1 cut(s) 226
PstNI CAGNNNCTG 1 cut(s) 323
PsyI GACNNNGTC 1 cut(s) 224
RsaI GTAC 1 cut(s) 175
RsaNI GTAC 1 cut(s) 174
RseI CAYNNNNRTG 1 cut(s) 263
Sau3AI GATC 1 cut(s) 148
Sau96I GGNCC 1 cut(s) 226
SetI ASST 5 cut(s) 69, 213, 241, 330, 350
SinI GGWCC 1 cut(s) 226
SmiMI CAYNNNNRTG 1 cut(s) 263
Sse9I AATT 3 cut(s) 130, 251, 309
SspMI CTAG 1 cut(s) 329
StyI CCWWGG 1 cut(s) 328
TaqI TCGA 1 cut(s) 151
TaqII GACCGA 1 cut(s) 233
TasI AATT 3 cut(s) 130, 251, 309
TfiI GAWTC 1 cut(s) 5
TseFI GTSAC 3 cut(s) 214, 281, 290
Tsp45I GTSAC 3 cut(s) 214, 281, 290
TspDTI ATGAA 1 cut(s) 281
Tth111I GACNNNGTC 1 cut(s) 224
VpaK11BI GGWCC 1 cut(s) 226
XapI RAATTY 1 cut(s) 251
XceI RCATGY 1 cut(s) 166
XmaJI CCTAGG 1 cut(s) 328
XspI CTAG 1 cut(s) 329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.