Rmu_co8379785.1_g000001

Glycerol-3-phosphate 2-O-acyltransferase 6-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8379785.1
Physical Location & Seq
Reverse (-)
176 .. 1090
915 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8379785.1_g000001.1.cds

Sequence Viewer

Length: 915 bp
atgaagctgtgcaaagagagctacgttgttccggctaagccggaagttgagccggtgagccacgaaaaattaccgaagcctatagtgttccacgacggccggctcgcttcgaaactaactccgttgatggctttgctcaccattctttggattccggtcggtttcgttttggcttgcttacgtattgctgccggttcattgcttcctatgccggtcgtgtactatgccttttgggctttgggtgttagggtttatatcaagggcaccccaccacctccagctaagaagtcaacgggtcaaaccggagttctcttcatttgctcacaccgaaccctactcgatcccattttcctctccaccgctctcgggcgtccgatcccagcagtcacatactctctctcgcgtctctcagagataatctcgcccatcaaaaccgtccggctaacccgggaccgggttgccgacgccaacatgatcaagaagcttctagaacaaggtgacctagtcatatgccccgagggcacaacatgccgtgaaccctttctgctgcggttctctgcgttgtttgccgagctcacggacgagctcgtccccgtggcgatggcaaatcggatgagcatgttccatggaaccaccgcgagggggtggaaggggatggacccgttttacttcttcatgaaccctagccctgcttatgaagtaacgtttttgaacaagttgcctagcgagttaacttgcggagcaggcaagtcgagccatgatgtggcgaactatatacaaaggactatcgcggcgagcttgtcgtacgagtgcacaacgttcacgaggaaagacaagtacagagctctggccgggaatgatggcacggtggcggagaaaccagctgctaatgccaaaaaaattatggggtgctag

Protein Analysis

304

Amino Acids

33.43

Weight (kDa)

9.35

Isoelectric Point (pI)

38.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 587
AccB1I GGYRCC 1 cut(s) 263
AccB7I CCANNNNNTGG 2 cut(s) 147, 763
AccBSI CCGCTC 1 cut(s) 362
AccII CGCG 3 cut(s) 403, 638, 791
AciI CCGC 6 cut(s) 360, 550, 636, 738, 791, 872
AclI AACGTT 2 cut(s) 704, 818
AclWI GGATC 2 cut(s) 335, 370
AcoI YGGCCR 2 cut(s) 97, 849
AcyI GRCGYC 2 cut(s) 370, 465
AfaI GTAC 3 cut(s) 221, 806, 839
AfiI CCNNNNNNNGG 7 cut(s) 147, 366, 453, 454, 639, 642, 763
AgsI TTSAA 1 cut(s) 712
AluBI AGCT 9 cut(s) 7, 21, 281, 484, 574, 586, 798, 845, 884
AluI AGCT 9 cut(s) 7, 21, 281, 484, 574, 586, 798, 845, 884
Alw21I GWGCWC 4 cut(s) 576, 588, 815, 847
Alw26I GTCTC 1 cut(s) 410
Alw44I GTGCAC 1 cut(s) 811
AlwI GGATC 2 cut(s) 335, 370
Ama87I CYCGRG 3 cut(s) 365, 447, 515
AoxI GGCC 2 cut(s) 97, 849
ApaLI GTGCAC 1 cut(s) 811
ApeKI GCWGC 3 cut(s) 188, 547, 884
Asp700I GAANNNNTTC 1 cut(s) 540
AspS9I GGNCC 2 cut(s) 451, 658
AsuC2I CCSGG 4 cut(s) 448, 449, 455, 853
AsuHPI GGTGA 3 cut(s) 67, 130, 509
AsuII TTCGAA 1 cut(s) 110
AvaI CYCGRG 3 cut(s) 365, 447, 515
AvaII GGWCC 2 cut(s) 451, 658
BaeGI GKGCMC 3 cut(s) 266, 524, 815
BanI GGYRCC 1 cut(s) 263
BanII GRGCYC 3 cut(s) 576, 588, 847
BauI CACGAG 1 cut(s) 823
Bbv12I GWGCWC 4 cut(s) 576, 588, 815, 847
BbvI GCAGC 3 cut(s) 175, 534, 871
BccI CCATC 5 cut(s) 121, 434, 595, 649, 854
BceAI ACGGC 2 cut(s) 112, 516
BcgI CGANNNNNNTGC 2 cut(s) 732, 766
BclI TGATCA 1 cut(s) 474
BcnI CCSGG 4 cut(s) 448, 449, 455, 853
BcoDI GTCTC 1 cut(s) 410
BfaI CTAG 5 cut(s) 488, 503, 684, 723, 913
BfmI CTRYAG 1 cut(s) 81
BglI GCCNNNNNGGC 2 cut(s) 233, 519
BisI GCNGC 4 cut(s) 189, 548, 792, 885
BlpI GCTNAGC 1 cut(s) 36
BlsI GCNGC 4 cut(s) 190, 549, 793, 886
Bme1390I CCNGG 4 cut(s) 448, 449, 455, 853
Bme18I GGWCC 2 cut(s) 451, 658
BmeT110I CYCGRG 3 cut(s) 365, 447, 515
BmgT120I GGNCC 2 cut(s) 451, 658
BmiI GGNNCC 4 cut(s) 265, 452, 631, 660
BmrFI CCNGG 4 cut(s) 448, 449, 455, 853
BplI GAGNNNNNCTC 2 cut(s) 404, 436
BpmI CTGGAG 1 cut(s) 261
Bpu1102I GCTNAGC 1 cut(s) 36
Bpu14I TTCGAA 1 cut(s) 110
BpuMI CCSGG 4 cut(s) 448, 449, 455, 853
BsaAI YACGTR 1 cut(s) 182
BsaHI GRCGYC 2 cut(s) 370, 465
BsaJI CCNNGG 4 cut(s) 447, 516, 594, 625
BsaWI WCCGGW 2 cut(s) 154, 302
Bsc4I CCNNNNNNNGG 7 cut(s) 147, 366, 453, 454, 639, 642, 763
Bse118I RCCGGY 4 cut(s) 52, 99, 191, 211
Bse3DI GCAATG 1 cut(s) 197
BseDI CCNNGG 4 cut(s) 447, 516, 594, 625
BseGI GGATG 2 cut(s) 618, 660
BseLI CCNNNNNNNGG 7 cut(s) 147, 366, 453, 454, 639, 642, 763
BseMI GCAATG 1 cut(s) 197
BseMII CTCAG 1 cut(s) 423
BseSI GKGCMC 3 cut(s) 266, 524, 815
BseX3I CGGCCG 1 cut(s) 97
BseXI GCAGC 3 cut(s) 175, 534, 871
BseYI CCCAGC 1 cut(s) 379
Bsh1236I CGCG 3 cut(s) 403, 638, 791
Bsh1285I CGRYCG 3 cut(s) 100, 159, 216
BshFI GGCC 2 cut(s) 99, 851
BshNI GGYRCC 1 cut(s) 263
BsiEI CGRYCG 3 cut(s) 100, 159, 216
BsiHKAI GWGCWC 4 cut(s) 576, 588, 815, 847
BsiHKCI CYCGRG 3 cut(s) 365, 447, 515
BsiWI CGTACG 1 cut(s) 804
BslFI GGGAC 2 cut(s) 464, 575
BslI CCNNNNNNNGG 7 cut(s) 147, 366, 453, 454, 639, 642, 763
BsmAI GTCTC 1 cut(s) 410
BsmBI CGTCTC 1 cut(s) 410
BsmFI GGGAC 2 cut(s) 464, 575
BsnI GGCC 2 cut(s) 99, 851
BsoBI CYCGRG 3 cut(s) 365, 447, 515
Bsp119I TTCGAA 1 cut(s) 110
Bsp1286I GDGCHC 6 cut(s) 266, 524, 576, 588, 815, 847
Bsp143I GATC 3 cut(s) 340, 375, 474
Bsp1720I GCTNAGC 1 cut(s) 36
Bsp19I CCATGG 1 cut(s) 625
BspACI CCGC 6 cut(s) 360, 550, 636, 738, 791, 872
BspANI GGCC 2 cut(s) 99, 851
BspCNI CTCAG 1 cut(s) 422
BspFNI CGCG 3 cut(s) 403, 638, 791
BspHI TCATGA 1 cut(s) 675
BspLI GGNNCC 4 cut(s) 265, 452, 631, 660
BspPI GGATC 2 cut(s) 335, 370
BspT104I TTCGAA 1 cut(s) 110
BspT107I GGYRCC 1 cut(s) 263
BsrBI CCGCTC 1 cut(s) 362
BsrDI GCAATG 1 cut(s) 197
BsrFI RCCGGY 4 cut(s) 52, 99, 191, 211
BssAI RCCGGY 4 cut(s) 52, 99, 191, 211
BssECI CCNNGG 4 cut(s) 447, 516, 594, 625
BssMI GATC 3 cut(s) 340, 375, 474
BssNI GRCGYC 2 cut(s) 370, 465
BssSI CACGAG 1 cut(s) 823
BssT1I CCWWGG 1 cut(s) 625
Bst2BI CACGAG 1 cut(s) 823
Bst4CI ACNGT 2 cut(s) 436, 868
Bst6I CTCTTC 1 cut(s) 317
BstACI GRCGYC 2 cut(s) 370, 465
BstAPI GCANNNNNTGC 1 cut(s) 528
BstBAI YACGTR 1 cut(s) 182
BstBI TTCGAA 1 cut(s) 110
BstC8I GCNNGC 5 cut(s) 101, 105, 175, 745, 796
BstDEI CTNAG 3 cut(s) 36, 282, 409
BstDSI CCRYGG 2 cut(s) 594, 625
BstEII GGTNACC 1 cut(s) 497
BstF5I GGATG 2 cut(s) 618, 660
BstFNI CGCG 3 cut(s) 403, 638, 791
BstKTI GATC 3 cut(s) 343, 378, 477
BstMAI GTCTC 1 cut(s) 410
BstMBI GATC 3 cut(s) 340, 375, 474
BstMCI CGRYCG 3 cut(s) 100, 159, 216
BstMWI GCNNNNNNNGC 9 cut(s) 18, 208, 233, 519, 528, 566, 744, 753, 890
BstNSI RCATGY 2 cut(s) 531, 622
BstPI GGTNACC 1 cut(s) 497
BstSCI CCNGG 4 cut(s) 446, 447, 453, 851
BstSFI CTRYAG 1 cut(s) 81
BstSLI GKGCMC 3 cut(s) 266, 524, 815
BstSNI TACGTA 1 cut(s) 182
BstUI CGCG 3 cut(s) 403, 638, 791
BstV1I GCAGC 3 cut(s) 175, 534, 871
BstZI CGGCCG 1 cut(s) 97
BsuRI GGCC 2 cut(s) 99, 851
BtgI CCRYGG 2 cut(s) 594, 625
BtgZI GCGATG 1 cut(s) 614
BtsCI GGATG 2 cut(s) 618, 660
Cac8I GCNNGC 5 cut(s) 101, 105, 175, 745, 796
CciI TCATGA 1 cut(s) 675
Cfr10I RCCGGY 4 cut(s) 52, 99, 191, 211
Cfr13I GGNCC 2 cut(s) 451, 658
Cfr9I CCCGGG 1 cut(s) 447
CseI GACGC 3 cut(s) 359, 392, 473
Csp6I GTAC 3 cut(s) 220, 805, 838
CviAII CATG 6 cut(s) 472, 528, 619, 626, 676, 758
CviQI GTAC 3 cut(s) 220, 805, 838
DdeI CTNAG 3 cut(s) 36, 282, 409
DpnI GATC 3 cut(s) 342, 377, 476
DpnII GATC 3 cut(s) 340, 375, 474
DrdI GACNNNNNNGTC 1 cut(s) 587
DseDI GACNNNNNNGTC 1 cut(s) 587
EaeI YGGCCR 2 cut(s) 97, 849
EagI CGGCCG 1 cut(s) 97
Eam1104I CTCTTC 1 cut(s) 317
EarI CTCTTC 1 cut(s) 317
EciI GGCGGA 1 cut(s) 887
Ecl136II GAGCTC 3 cut(s) 574, 586, 845
EclXI CGGCCG 1 cut(s) 97
Eco105I TACGTA 1 cut(s) 182
Eco130I CCWWGG 1 cut(s) 625
Eco24I GRGCYC 3 cut(s) 576, 588, 847
Eco47I GGWCC 2 cut(s) 451, 658
Eco52I CGGCCG 1 cut(s) 97
Eco53kI GAGCTC 3 cut(s) 574, 586, 845
Eco88I CYCGRG 3 cut(s) 365, 447, 515
Eco91I GGTNACC 1 cut(s) 497
EcoICRI GAGCTC 3 cut(s) 574, 586, 845
EcoO65I GGTNACC 1 cut(s) 497
EcoT14I CCWWGG 1 cut(s) 625
EcoT38I GRGCYC 3 cut(s) 576, 588, 847
ErhI CCWWGG 1 cut(s) 625
Esp3I CGTCTC 1 cut(s) 410
FaeI CATG 6 cut(s) 475, 531, 622, 629, 679, 761
FaqI GGGAC 2 cut(s) 464, 575
FatI CATG 6 cut(s) 471, 527, 618, 625, 675, 757
FauNDI CATATG 1 cut(s) 509
FbaI TGATCA 1 cut(s) 474
Fnu4HI GCNGC 4 cut(s) 189, 548, 792, 885
FokI GGATG 2 cut(s) 625, 667
FriOI GRGCYC 3 cut(s) 576, 588, 847
Fsp4HI GCNGC 4 cut(s) 189, 548, 792, 885
FspBI CTAG 5 cut(s) 488, 503, 684, 723, 913
GluI GCNGC 4 cut(s) 189, 548, 792, 885
GsaI CCCAGC 1 cut(s) 383
GsuI CTGGAG 1 cut(s) 261
HaeIII GGCC 2 cut(s) 99, 851
HgaI GACGC 3 cut(s) 359, 392, 473
Hin1I GRCGYC 2 cut(s) 370, 465
Hin1II CATG 6 cut(s) 475, 531, 622, 629, 679, 761
HincII GTYRAC 2 cut(s) 291, 732
HindII GTYRAC 2 cut(s) 291, 732
HindIII AAGCTT 1 cut(s) 482
HinfI GANTC 1 cut(s) 151
HpaI GTTAAC 1 cut(s) 732
HphI GGTGA 3 cut(s) 67, 130, 509
Hpy166II GTNNAC 6 cut(s) 220, 291, 536, 732, 813, 822
Hpy188I TCNGA 3 cut(s) 375, 412, 612
Hpy188III TCNNGA 4 cut(s) 478, 488, 676, 823
Hpy8I GTNNAC 6 cut(s) 220, 291, 536, 732, 813, 822
Hpy99I CGWCG 2 cut(s) 98, 467
HpyAV CCTTC 1 cut(s) 643
HpyCH4III ACNGT 2 cut(s) 436, 868
HpyCH4IV ACGT 4 cut(s) 24, 181, 704, 818
HpyCH4V TGCA 2 cut(s) 12, 813
HpyF10VI GCNNNNNNNGC 9 cut(s) 18, 208, 233, 519, 528, 566, 744, 753, 890
HpyF3I CTNAG 3 cut(s) 36, 282, 409
HpySE526I ACGT 4 cut(s) 24, 181, 704, 818
Hsp92I GRCGYC 2 cut(s) 370, 465
Hsp92II CATG 6 cut(s) 475, 531, 622, 629, 679, 761
KroI GCCGGC 1 cut(s) 99
KroNI GCCGGC 1 cut(s) 101
Ksp22I TGATCA 1 cut(s) 474
KspAI GTTAAC 1 cut(s) 732
Kzo9I GATC 3 cut(s) 340, 375, 474
LmnI GCTCC 1 cut(s) 740
Lsp1109I GCAGC 3 cut(s) 175, 534, 871
MaeI CTAG 5 cut(s) 488, 503, 684, 723, 913
MaeII ACGT 4 cut(s) 24, 181, 704, 818
MaeIII GTNAC 3 cut(s) 385, 497, 700
MalI GATC 3 cut(s) 342, 377, 476
MbiI CCGCTC 1 cut(s) 362
MboI GATC 3 cut(s) 340, 375, 474
MboII GAAGA 2 cut(s) 304, 664
MhlI GDGCHC 6 cut(s) 266, 524, 576, 588, 815, 847
MluCI AATT 2 cut(s) 68, 900
MnlI CCTC 5 cut(s) 285, 362, 511, 633, 819
MroNI GCCGGC 1 cut(s) 99
MroXI GAANNNNTTC 1 cut(s) 540
MseI TTAA 1 cut(s) 731
MspA1I CMGCKG 1 cut(s) 884
MspR9I CCNGG 4 cut(s) 448, 449, 455, 853
MvnI CGCG 3 cut(s) 403, 638, 791
MwoI GCNNNNNNNGC 9 cut(s) 18, 208, 233, 519, 528, 566, 744, 753, 890
NaeI GCCGGC 1 cut(s) 101
NciI CCSGG 4 cut(s) 448, 449, 455, 853
NcoI CCATGG 1 cut(s) 625
NdeI CATATG 1 cut(s) 509
NdeII GATC 3 cut(s) 340, 375, 474
NgoMIV GCCGGC 1 cut(s) 99
NlaIII CATG 6 cut(s) 475, 531, 622, 629, 679, 761
NlaIV GGNNCC 4 cut(s) 265, 452, 631, 660
NmeAIII GCCGAG 1 cut(s) 595
NmuCI GTSAC 2 cut(s) 385, 497
NspI RCATGY 2 cut(s) 531, 622
NspV TTCGAA 1 cut(s) 110
PagI TCATGA 1 cut(s) 675
PdiI GCCGGC 1 cut(s) 101
PdmI GAANNNNTTC 1 cut(s) 540
PfeI GAWTC 1 cut(s) 151
Pfl23II CGTACG 1 cut(s) 804
PflFI GACNNNGTC 1 cut(s) 503
PflMI CCANNNNNTGG 2 cut(s) 147, 763
PkrI GCNGC 4 cut(s) 190, 549, 793, 886
Ppu21I YACGTR 1 cut(s) 182
Psp124BI GAGCTC 3 cut(s) 576, 588, 847
Psp1406I AACGTT 2 cut(s) 704, 818
PspEI GGTNACC 1 cut(s) 497
PspFI CCCAGC 1 cut(s) 379
PspLI CGTACG 1 cut(s) 804
PspN4I GGNNCC 4 cut(s) 265, 452, 631, 660
PspPI GGNCC 2 cut(s) 451, 658
PsyI GACNNNGTC 1 cut(s) 503
PvuII CAGCTG 1 cut(s) 884
RsaI GTAC 3 cut(s) 221, 806, 839
RsaNI GTAC 3 cut(s) 220, 805, 838
SacI GAGCTC 3 cut(s) 576, 588, 847
SaqAI TTAA 1 cut(s) 731
SatI GCNGC 4 cut(s) 189, 548, 792, 885
Sau3AI GATC 3 cut(s) 340, 375, 474
Sau96I GGNCC 2 cut(s) 451, 658
ScrFI CCNGG 4 cut(s) 448, 449, 455, 853
SduI GDGCHC 6 cut(s) 266, 524, 576, 588, 815, 847
SfcI CTRYAG 1 cut(s) 81
SfuI TTCGAA 1 cut(s) 110
SinI GGWCC 2 cut(s) 451, 658
SmaI CCCGGG 1 cut(s) 449
SnaBI TACGTA 1 cut(s) 182
Sse9I AATT 2 cut(s) 68, 900
SsiI CCGC 6 cut(s) 360, 550, 636, 738, 791, 872
SspMI CTAG 5 cut(s) 488, 503, 684, 723, 913
SstI GAGCTC 3 cut(s) 576, 588, 847
StyD4I CCNGG 4 cut(s) 446, 447, 453, 851
StyI CCWWGG 1 cut(s) 625
TaaI ACNGT 2 cut(s) 436, 868
TaiI ACGT 4 cut(s) 27, 184, 707, 821
TaqI TCGA 3 cut(s) 110, 339, 752
TasI AATT 2 cut(s) 68, 900
TatI WGTACW 2 cut(s) 219, 837
TauI GCSGC 1 cut(s) 794
TfiI GAWTC 1 cut(s) 151
Tru1I TTAA 1 cut(s) 731
Tru9I TTAA 1 cut(s) 731
TseFI GTSAC 2 cut(s) 385, 497
TseI GCWGC 3 cut(s) 188, 547, 884
Tsp45I GTSAC 2 cut(s) 385, 497
TspDTI ATGAA 6 cut(s) 17, 186, 304, 664, 692, 711
TspGWI ACGGA 2 cut(s) 111, 593
TspMI CCCGGG 1 cut(s) 447
Tth111I GACNNNGTC 1 cut(s) 503
Van91I CCANNNNNTGG 2 cut(s) 147, 763
VneI GTGCAC 1 cut(s) 811
VpaK11BI GGWCC 2 cut(s) 451, 658
XbaI TCTAGA 1 cut(s) 487
XceI RCATGY 2 cut(s) 531, 622
XcmI CCANNNNNNNNNTGG 1 cut(s) 901
XmaI CCCGGG 1 cut(s) 447
XmnI GAANNNNTTC 1 cut(s) 540
XspI CTAG 5 cut(s) 488, 503, 684, 723, 913
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.