Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001115

Physical Location & Seq

Genomic Coordinates Reverse (-)

1027913 .. 1034653

Gene Structure 6741 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0006900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGCAGAGGTCGCGTAGAGCTCTTCTGCATAGAAGAGCTTTGGAAAAGGTCATCACCGGAAGGAGCCGCTTGTATAAGGTGTCTCTATCTTTAGTTTTTGCTCTGTGGGGGTTTGTCTTCCTTATCAGCTTATGGTTTAGTCGTGGCGACGGACACAGAGATGGATCCACAGCATCTCCAGTTGGATTATCAACTTGGAATGAAACTAAGCTGGATCGTGATGAACACACTGATTCTGTAGAACAAAAGCAAGAACATTTAGTCTACTCTTCTGAAGGTGTGTGCACAAATGGTGTTGAAACTAGTAGTTTAAATGGTGAACTACTTAGTGAAGGAAATAGACATCAGGCCTCAACAGAAGGAAGTGCAATTTATAACTCGGCCGTAGCTGAGCAACCTGAATTGGAGAAATCTAGTTCAGGCATGAAACATGAAATTGATGCTCCAAAAAATGGCCGCCTGCCTCGTGCTGTGCCTCTTGGTCTGGATGAATTCAAGAGCAAAACATTTAGTTCAAAAATTAAATCTGTAATTGGTCAGGCTGGAGGCATAAAACATAGAGTGGAGCCTGGTGGTACAGAGTACAATTACGCTTCAGCTGCAAAGGGAGCCAAGGTCTTGGCTTTTAACAAGGAAGCCAAGGGTGCCTCTAATATCATAAGCAGAGACAAGGACAAGTACCTTCGCAATCCATGTTCTGCAGAAGAAAAGTTTGTTGATATAGAACTTTCAGAAGAAACCTTGGTAGACACAATCAAAATAGGTAATCTTGAACACTATTCATCTAATTTAAGGGATTTTGAGCTGCTTGGCAGTTTGGTTTATCCAACAGATGAATGGGTTAAGCTTGGGAATTTCACTGCAGCAAATATTAAGCTAGCGCAAAGATTTGATCTTGAGGAACCTAAGTGGGTGAGATATATAAGGTTAAAGCTTTTAAACCATTATGGTTCAGAGTTCTATTGCACAGTCAGTGTTATTGAAATTTATGGAATTGATGCTGTTGAGCGAATGCTTGAGGATTTAATTTCTGTTGAAAGCGGCGCATATGTTTCTAATGGAGTAACTGTTGACCAGAAACCTGTGACCTCCCACCCAGATTCCCCTGAGGGTGATGATTTTTTTAATATTGATAAAGAAATGGAACCTCAAGCTGCAGTTGAAAACTCTAATGTGAACAATGAAATAATCAAGAGTGATGTGCCTGATCCTATCAAAGAAGCACTTCATCAACAAGGTAGCAGGATGCCTGGGGATACTGTTCTTAAGATACTAATGCAGAAAGTCCGTTCATTGGATTTTAGTTTATCACTACTTGAGCGATACCTTGAGGAATCAAATTCAAGATATGGCAGCATTTTCAAAGAATTCGAGACAGATATGGAAGAGAAAGAGTTAGATTTACAGAAGATCAAAGAAAACATGAGGAATCTCTTAGAAAGCCAGGAAGTAATTGCTAAAGATGTAAACAATCTCATGTCTTGGCAGTCCCTTGTCTCTGTGCAATTGGATAATTTAGTCAGGGATAACGCTATCCTCAGGTCTGAGGTTGAAAAGGTCAGGGAGAAGCAGATATCTGTAGATAATAAGGGTGTTGTAATATTTCTAGTCTGTGTACTTTTCTCATTGTTGGCCCTTGCGAGGCTTTTTATAGATATTGTGGGTAGTGTTTATAGTGCATTCAGTGTTCATACAACAGAGAAATCCAGGAAATTTTGTTTGATGAGCTCTTCCTGGGTTTCCTTACTAGTGAGCTGTATCCTTGTCCTATTTATATTATCTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009791 GO:0009908 GO:0009987 GO:0010143 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0043170 GO:0044237 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090447 GO:0090567 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase HAD

Protein Analysis

595

Amino Acids

66.8

Weight (kDa)

5.47

Isoelectric Point (pI)

39.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sad1_UNC	PF07738	210 - 331	9.8e-32	Sad1 / UNC-like C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001115)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g08560
prunus_persica	Prupe.8G098600_v2.0.a1 Prupe.8G098600_v2.0.a1 Prupe.8G098600_v2.0.a1 Prupe.8G098600_v2.0.a1 Prupe.8G098800_v2.0.a1 Prupe.8G098800_v2.0.a1 Prupe.8G099000_v2.0.a1 Prupe.8G099300_v2.0.a1 Prupe.8G099400_v2.0.a1 Prupe.8G099600_v2.0.a1
pyrus_communis	pycom10g06080
rosa_chinensis	RchiOBHm_Chr6g0263911 RchiOBHm_Chr6g0263961
rosa_laevigata	RLG00000014299 RLG00000014301 RLG00000014304
rosa_multiflora	Rmu_co8358715.1_g000001 Rmu_sc0002112.1_g000016 Rmu_sc0002112.1_g000024 Rmu_sc0012632.1_g000003 Rmu_sc0034069.1_g000003
rosa_roxburghii	Rroxscaffold_176G00431290 Rroxscaffold_176G00431330 Rroxscaffold_176G00431350 Rroxscaffold_7G00203700 Rroxscaffold_7G00203730 Rroxscaffold_7G00203780
rosa_rugosa	Rorug06G0006700 Rorug06G0006900 Rorug06G0007100
rosa_samantha	Rh2AG330700 Rh2BG229300 Rh2CG233200 Rh4BG141700 Rh4DG296100 Rh5AG132100 Rh5AG357800 Rh6AG126900 Rh6AG127500 Rh6AG128000 Rh6BG041500 Rh6BG112800 Rh6BG123100 Rh6BG123300 Rh6BG123400 Rh6BG123800 Rh6CG111000 Rh6CG121600 Rh6CG121800 Rh6CG122000 Rh6CG122500 Rh6DG100600 Rh6DG109000 Rh6DG109200 Rh6DG109700 Rh6DG147300
rosa_wichuraiana	Rw6G011020 Rw6G011050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	375
AccB1I	GGYRCC	1 cut(s)	644
AccB7I	CCANNNNNTGG	1 cut(s)	452
AccI	GTMKAC	2 cut(s)	264, 747
AccII	CGCG	1 cut(s)	13
AciI	CCGC	3 cut(s)	67, 457, 1041
AclWI	GGATC	4 cut(s)	159, 172, 222, 1202
AcoI	YGGCCR	2 cut(s)	381, 454
AcsI	RAATTY	6 cut(s)	491, 853, 984, 1339, 1367, 1712
AcuI	CTGAAG	2 cut(s)	294, 579
AfaI	GTAC	4 cut(s)	577, 584, 680, 1617
AfiI	CCNNNNNNNGG	3 cut(s)	452, 1294, 1641
AflII	CTTAAG	1 cut(s)	1265
AhlI	ACTAGT	2 cut(s)	302, 1747
AjnI	CCWGG	5 cut(s)	568, 1249, 1443, 1706, 1733
Alw21I	GWGCWC	3 cut(s)	22, 287, 1730
Alw26I	GTCTC	4 cut(s)	87, 660, 1367, 1501
Alw44I	GTGCAC	1 cut(s)	283
AlwI	GGATC	4 cut(s)	159, 172, 222, 1202
AoxI	GGCC	4 cut(s)	348, 381, 454, 1632
ApaLI	GTGCAC	1 cut(s)	283
ApeKI	GCWGC	5 cut(s)	599, 805, 863, 1154, 1353
ApoI	RAATTY	6 cut(s)	491, 853, 984, 1339, 1367, 1712
Asp700I	GAANNNNTTC	1 cut(s)	1224
AspLEI	GCGC	2 cut(s)	883, 1046
AspS9I	GGNCC	1 cut(s)	1633
AsuHPI	GGTGA	4 cut(s)	46, 329, 925, 1124
AsuNHI	GCTAGC	1 cut(s)	877
AxyI	CCTNAGG	2 cut(s)	1107, 1538
BaeGI	GKGCMC	1 cut(s)	287
BamHI	GGATCC	1 cut(s)	164
BanI	GGYRCC	1 cut(s)	644
BanII	GRGCYC	2 cut(s)	22, 1730
BauI	CACGAG	1 cut(s)	465
BbsI	GAAGAC	1 cut(s)	109
Bbv12I	GWGCWC	3 cut(s)	22, 287, 1730
BbvI	GCAGC	5 cut(s)	586, 792, 875, 1141, 1365
BccI	CCATC	1 cut(s)	155
BceAI	ACGGC	1 cut(s)	368
BciT130I	CCWGG	5 cut(s)	570, 1251, 1445, 1708, 1735
BciVI	GTATCC	2 cut(s)	1249, 1769
BcoDI	GTCTC	4 cut(s)	87, 660, 1367, 1501
BcuI	ACTAGT	2 cut(s)	302, 1747
BfaI	CTAG	5 cut(s)	303, 414, 878, 1607, 1748
BfmI	CTRYAG	5 cut(s)	237, 699, 861, 1155, 1578
BfrI	CTTAAG	1 cut(s)	1265
BfuI	GTATCC	2 cut(s)	1249, 1769
BisI	GCNGC	8 cut(s)	67, 457, 600, 806, 864, 1042, 1155, 1354
BlpI	GCTNAGC	1 cut(s)	390
BlsI	GCNGC	8 cut(s)	68, 458, 601, 807, 865, 1043, 1156, 1355
Bme1390I	CCNGG	5 cut(s)	570, 1251, 1445, 1708, 1735
BmgT120I	GGNCC	1 cut(s)	1633
BmiI	GGNNCC	7 cut(s)	65, 166, 567, 610, 646, 903, 1146
BmrFI	CCNGG	5 cut(s)	570, 1251, 1445, 1708, 1735
BmsI	GCATC	4 cut(s)	182, 430, 988, 1236
BmtI	GCTAGC	1 cut(s)	881
BpiI	GAAGAC	1 cut(s)	109
BpmI	CTGGAG	2 cut(s)	162, 564
Bpu1102I	GCTNAGC	1 cut(s)	390
BpuEI	CTTGAG	5 cut(s)	917, 1037, 1134, 1337, 1349
BsaJI	CCNNGG	5 cut(s)	612, 639, 741, 1250, 1734
BsaWI	WCCGGW	1 cut(s)	56
BsaXI	ACNNNNNCTCC	6 cut(s)	160, 190, 600, 630, 1053, 1083
Bsc4I	CCNNNNNNNGG	3 cut(s)	452, 1294, 1641
Bse1I	ACTGG	1 cut(s)	179
Bse21I	CCTNAGG	2 cut(s)	1107, 1538
BseBI	CCWGG	5 cut(s)	570, 1251, 1445, 1708, 1735
BseDI	CCNNGG	5 cut(s)	612, 639, 741, 1250, 1734
BseGI	GGATG	2 cut(s)	493, 1251
BseLI	CCNNNNNNNGG	3 cut(s)	452, 1294, 1641
BseMII	CTCAG	4 cut(s)	381, 1098, 1536, 1552
BseNI	ACTGG	1 cut(s)	179
BseSI	GKGCMC	1 cut(s)	287
BseX3I	CGGCCG	1 cut(s)	381
BseXI	GCAGC	5 cut(s)	586, 792, 875, 1141, 1365
Bsh1236I	CGCG	1 cut(s)	13
Bsh1285I	CGRYCG	1 cut(s)	384
BshFI	GGCC	4 cut(s)	350, 383, 456, 1634
BshNI	GGYRCC	1 cut(s)	644
BsiEI	CGRYCG	1 cut(s)	384
BsiHKAI	GWGCWC	3 cut(s)	22, 287, 1730
BsiSI	CCGG	1 cut(s)	57
BslFI	GGGAC	1 cut(s)	1474
BslI	CCNNNNNNNGG	3 cut(s)	452, 1294, 1641
BsmAI	GTCTC	4 cut(s)	87, 660, 1367, 1501
BsmFI	GGGAC	1 cut(s)	1474
BsmI	GAATGC	2 cut(s)	1017, 1679
BsnI	GGCC	4 cut(s)	350, 383, 456, 1634
Bsp1286I	GDGCHC	3 cut(s)	22, 287, 1730
Bsp143I	GATC	5 cut(s)	164, 214, 892, 1207, 1410
Bsp1720I	GCTNAGC	1 cut(s)	390
BspACI	CCGC	3 cut(s)	67, 457, 1041
BspANI	GGCC	4 cut(s)	350, 383, 456, 1634
BspCNI	CTCAG	4 cut(s)	382, 1099, 1537, 1551
BspFNI	CGCG	1 cut(s)	13
BspLI	GGNNCC	7 cut(s)	65, 166, 567, 610, 646, 903, 1146
BspMAI	CTGCAG	3 cut(s)	703, 865, 1159
BspOI	GCTAGC	1 cut(s)	881
BspPI	GGATC	4 cut(s)	159, 172, 222, 1202
BspQI	GCTCTTC	3 cut(s)	27, 28, 1735
BspT107I	GGYRCC	1 cut(s)	644
BspTI	CTTAAG	1 cut(s)	1265
BsrI	ACTGG	1 cut(s)	179
BssECI	CCNNGG	5 cut(s)	612, 639, 741, 1250, 1734
BssMI	GATC	5 cut(s)	164, 214, 892, 1207, 1410
BssSI	CACGAG	1 cut(s)	465
BssT1I	CCWWGG	3 cut(s)	612, 639, 741
Bst2BI	CACGAG	1 cut(s)	465
Bst2UI	CCWGG	5 cut(s)	570, 1251, 1445, 1708, 1735
Bst4CI	ACNGT	3 cut(s)	970, 1069, 1261
Bst6I	CTCTTC	5 cut(s)	27, 28, 274, 1380, 1735
BstAFI	CTTAAG	1 cut(s)	1265
BstC8I	GCNNGC	2 cut(s)	461, 879
BstDEI	CTNAG	8 cut(s)	207, 326, 390, 906, 1107, 1435, 1538, 1545
BstF5I	GGATG	2 cut(s)	493, 1251
BstFNI	CGCG	1 cut(s)	13
BstHHI	GCGC	2 cut(s)	883, 1046
BstKTI	GATC	5 cut(s)	167, 217, 895, 1210, 1413
BstMAI	GTCTC	4 cut(s)	87, 660, 1367, 1501
BstMBI	GATC	5 cut(s)	164, 214, 892, 1207, 1410
BstMCI	CGRYCG	1 cut(s)	384
BstMWI	GCNNNNNNNGC	4 cut(s)	10, 599, 608, 644
BstNI	CCWGG	5 cut(s)	570, 1251, 1445, 1708, 1735
BstSCI	CCNGG	5 cut(s)	568, 1249, 1443, 1706, 1733
BstSFI	CTRYAG	5 cut(s)	237, 699, 861, 1155, 1578
BstSLI	GKGCMC	1 cut(s)	287
BstUI	CGCG	1 cut(s)	13
BstV1I	GCAGC	5 cut(s)	586, 792, 875, 1141, 1365
BstV2I	GAAGAC	1 cut(s)	109
BstX2I	RGATCY	1 cut(s)	164
BstXI	CCANNNNNNTGG	1 cut(s)	619
BstYI	RGATCY	1 cut(s)	164
BstZI	CGGCCG	1 cut(s)	381
Bsu36I	CCTNAGG	2 cut(s)	1107, 1538
BsuI	GTATCC	2 cut(s)	1249, 1769
BsuRI	GGCC	4 cut(s)	350, 383, 456, 1634
BtsCI	GGATG	2 cut(s)	493, 1251
BtsI	GCAGTG	1 cut(s)	858
BtsIMutI	CAGTG	4 cut(s)	228, 858, 979, 1690
Cac8I	GCNNGC	2 cut(s)	461, 879
CfoI	GCGC	2 cut(s)	883, 1046
Cfr13I	GGNCC	1 cut(s)	1633
Csp6I	GTAC	4 cut(s)	576, 583, 679, 1616
CviAII	CATG	5 cut(s)	424, 431, 693, 1423, 1477
CviQI	GTAC	4 cut(s)	576, 583, 679, 1616
DdeI	CTNAG	8 cut(s)	207, 326, 390, 906, 1107, 1435, 1538, 1545
DpnI	GATC	5 cut(s)	166, 216, 894, 1209, 1412
DpnII	GATC	5 cut(s)	164, 214, 892, 1207, 1410
DraI	TTTAAA	2 cut(s)	312, 939
EaeI	YGGCCR	2 cut(s)	381, 454
EagI	CGGCCG	1 cut(s)	381
Eam1104I	CTCTTC	5 cut(s)	27, 28, 274, 1380, 1735
EarI	CTCTTC	5 cut(s)	27, 28, 274, 1380, 1735
Ecl136II	GAGCTC	2 cut(s)	20, 1728
EclXI	CGGCCG	1 cut(s)	381
Eco130I	CCWWGG	3 cut(s)	612, 639, 741
Eco147I	AGGCCT	1 cut(s)	350
Eco24I	GRGCYC	2 cut(s)	22, 1730
Eco32I	GATATC	1 cut(s)	1575
Eco52I	CGGCCG	1 cut(s)	381
Eco53kI	GAGCTC	2 cut(s)	20, 1728
Eco57I	CTGAAG	2 cut(s)	294, 579
Eco81I	CCTNAGG	2 cut(s)	1107, 1538
EcoICRI	GAGCTC	2 cut(s)	20, 1728
EcoRI	GAATTC	2 cut(s)	491, 1367
EcoRII	CCWGG	5 cut(s)	568, 1249, 1443, 1706, 1733
EcoRV	GATATC	1 cut(s)	1575
EcoT14I	CCWWGG	3 cut(s)	612, 639, 741
EcoT38I	GRGCYC	2 cut(s)	22, 1730
ErhI	CCWWGG	3 cut(s)	612, 639, 741
FaeI	CATG	5 cut(s)	427, 434, 696, 1426, 1480
FalI	AAGNNNNNCTT	2 cut(s)	1209, 1241
FaqI	GGGAC	1 cut(s)	1474
FatI	CATG	5 cut(s)	423, 430, 692, 1422, 1476
FauNDI	CATATG	1 cut(s)	1048
FblI	GTMKAC	2 cut(s)	264, 747
Fnu4HI	GCNGC	8 cut(s)	67, 457, 600, 806, 864, 1042, 1155, 1354
FokI	GGATG	2 cut(s)	500, 1258
FriOI	GRGCYC	2 cut(s)	22, 1730
Fsp4HI	GCNGC	8 cut(s)	67, 457, 600, 806, 864, 1042, 1155, 1354
FspBI	CTAG	5 cut(s)	303, 414, 878, 1607, 1748
GlaI	GCGC	2 cut(s)	882, 1045
GluI	GCNGC	8 cut(s)	67, 457, 600, 806, 864, 1042, 1155, 1354
GsuI	CTGGAG	2 cut(s)	162, 564
HaeIII	GGCC	4 cut(s)	350, 383, 456, 1634
HapII	CCGG	1 cut(s)	57
HhaI	GCGC	2 cut(s)	883, 1046
Hin1II	CATG	5 cut(s)	427, 434, 696, 1426, 1480
Hin6I	GCGC	2 cut(s)	881, 1044
HinP1I	GCGC	2 cut(s)	881, 1044
HincII	GTYRAC	1 cut(s)	1072
HindII	GTYRAC	1 cut(s)	1072
HindIII	AAGCTT	2 cut(s)	845, 932
HinfI	GANTC	4 cut(s)	233, 1100, 1334, 1429
HpaII	CCGG	1 cut(s)	57
HphI	GGTGA	4 cut(s)	46, 329, 925, 1124
Hpy166II	GTNNAC	8 cut(s)	265, 285, 320, 748, 1072, 1177, 1468, 1616
Hpy188I	TCNGA	4 cut(s)	274, 733, 955, 1546
Hpy188III	TCNNGA	8 cut(s)	218, 485, 496, 770, 896, 1192, 1344, 1372
Hpy8I	GTNNAC	8 cut(s)	265, 285, 320, 748, 1072, 1177, 1468, 1616
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	5 cut(s)	54, 269, 326, 353, 692
HpyCH4III	ACNGT	3 cut(s)	970, 1069, 1261
HpyF10VI	GCNNNNNNNGC	4 cut(s)	10, 599, 608, 644
HpyF3I	CTNAG	8 cut(s)	207, 326, 390, 906, 1107, 1435, 1538, 1545
Hsp92II	CATG	5 cut(s)	427, 434, 696, 1426, 1480
HspAI	GCGC	2 cut(s)	881, 1044
Kzo9I	GATC	5 cut(s)	164, 214, 892, 1207, 1410
LguI	GCTCTTC	3 cut(s)	27, 28, 1735
LmnI	GCTCC	4 cut(s)	63, 448, 565, 608
Lsp1109I	GCAGC	5 cut(s)	586, 792, 875, 1141, 1365
LweI	GCATC	4 cut(s)	182, 430, 988, 1236
MaeI	CTAG	5 cut(s)	303, 414, 878, 1607, 1748
MaeIII	GTNAC	2 cut(s)	1063, 1084
MalI	GATC	5 cut(s)	166, 216, 894, 1209, 1412
MboI	GATC	5 cut(s)	164, 214, 892, 1207, 1410
MboII	GAAGA	9 cut(s)	14, 45, 109, 261, 716, 746, 1397, 1420, 1722
MfeI	CAATTG	1 cut(s)	1505
MflI	RGATCY	1 cut(s)	164
MhlI	GDGCHC	3 cut(s)	22, 287, 1730
MmeI	TCCRAC	2 cut(s)	163, 851
MroXI	GAANNNNTTC	1 cut(s)	1224
MslI	CAYNNNNRTG	1 cut(s)	159
MspA1I	CMGCKG	1 cut(s)	599
MspCI	CTTAAG	1 cut(s)	1265
MspI	CCGG	1 cut(s)	57
MspR9I	CCNGG	5 cut(s)	570, 1251, 1445, 1708, 1735
MunI	CAATTG	1 cut(s)	1505
Mva1269I	GAATGC	2 cut(s)	1017, 1679
MvaI	CCWGG	5 cut(s)	570, 1251, 1445, 1708, 1735
MvnI	CGCG	1 cut(s)	13
MwoI	GCNNNNNNNGC	4 cut(s)	10, 599, 608, 644
NdeI	CATATG	1 cut(s)	1048
NdeII	GATC	5 cut(s)	164, 214, 892, 1207, 1410
NheI	GCTAGC	1 cut(s)	877
NlaIII	CATG	5 cut(s)	427, 434, 696, 1426, 1480
NlaIV	GGNNCC	7 cut(s)	65, 166, 567, 610, 646, 903, 1146
NmeAIII	GCCGAG	1 cut(s)	359
NmuCI	GTSAC	1 cut(s)	1084
PceI	AGGCCT	1 cut(s)	350
PciSI	GCTCTTC	3 cut(s)	27, 28, 1735
PctI	GAATGC	2 cut(s)	1017, 1679
PdmI	GAANNNNTTC	1 cut(s)	1224
PfeI	GAWTC	4 cut(s)	233, 1100, 1334, 1429
PflMI	CCANNNNNTGG	1 cut(s)	452
PfoI	TCCNGGA	1 cut(s)	1706
PkrI	GCNGC	8 cut(s)	68, 458, 601, 807, 865, 1043, 1156, 1355
PsiI	TTATAA	1 cut(s)	375
Psp124BI	GAGCTC	2 cut(s)	22, 1730
Psp6I	CCWGG	5 cut(s)	568, 1249, 1443, 1706, 1733
PspGI	CCWGG	5 cut(s)	568, 1249, 1443, 1706, 1733
PspN4I	GGNNCC	7 cut(s)	65, 166, 567, 610, 646, 903, 1146
PspPI	GGNCC	1 cut(s)	1633
PstI	CTGCAG	3 cut(s)	703, 865, 1159
PsuI	RGATCY	1 cut(s)	164
PvuII	CAGCTG	1 cut(s)	599
RsaI	GTAC	4 cut(s)	577, 584, 680, 1617
RsaNI	GTAC	4 cut(s)	576, 583, 679, 1616
RseI	CAYNNNNRTG	1 cut(s)	159
SacI	GAGCTC	2 cut(s)	22, 1730
SapI	GCTCTTC	3 cut(s)	27, 28, 1735
SatI	GCNGC	8 cut(s)	67, 457, 600, 806, 864, 1042, 1155, 1354
Sau3AI	GATC	5 cut(s)	164, 214, 892, 1207, 1410
Sau96I	GGNCC	1 cut(s)	1633
ScrFI	CCNGG	5 cut(s)	570, 1251, 1445, 1708, 1735
SduI	GDGCHC	3 cut(s)	22, 287, 1730
SfaNI	GCATC	4 cut(s)	182, 430, 988, 1236
SfcI	CTRYAG	5 cut(s)	237, 699, 861, 1155, 1578
SmiMI	CAYNNNNRTG	1 cut(s)	159
SmlI	CTYRAG	6 cut(s)	896, 1016, 1149, 1265, 1316, 1328
SmoI	CTYRAG	6 cut(s)	896, 1016, 1149, 1265, 1316, 1328
SpeI	ACTAGT	2 cut(s)	302, 1747
SseBI	AGGCCT	1 cut(s)	350
SsiI	CCGC	3 cut(s)	67, 457, 1041
SspI	AATATT	3 cut(s)	871, 1129, 1602
SspMI	CTAG	5 cut(s)	303, 414, 878, 1607, 1748
SstI	GAGCTC	2 cut(s)	22, 1730
StuI	AGGCCT	1 cut(s)	350
StyD4I	CCNGG	5 cut(s)	568, 1249, 1443, 1706, 1733
StyI	CCWWGG	3 cut(s)	612, 639, 741
TaaI	ACNGT	3 cut(s)	970, 1069, 1261
TaqI	TCGA	1 cut(s)	1371
TatI	WGTACW	2 cut(s)	582, 1615
TauI	GCSGC	3 cut(s)	69, 459, 1044
TfiI	GAWTC	4 cut(s)	233, 1100, 1334, 1429
TscAI	CASTG	4 cut(s)	235, 865, 979, 1690
TseFI	GTSAC	1 cut(s)	1084
TseI	GCWGC	5 cut(s)	599, 805, 863, 1154, 1353
Tsp45I	GTSAC	1 cut(s)	1084
TspGWI	ACGGA	2 cut(s)	165, 1277
TspRI	CASTG	4 cut(s)	235, 865, 979, 1690
Van91I	CCANNNNNTGG	1 cut(s)	452
Vha464I	CTTAAG	1 cut(s)	1265
VneI	GTGCAC	1 cut(s)	283
XapI	RAATTY	6 cut(s)	491, 853, 984, 1339, 1367, 1712
XcmI	CCANNNNNNNNNTGG	1 cut(s)	834
XmiI	GTMKAC	2 cut(s)	264, 747
XmnI	GAANNNNTTC	1 cut(s)	1224
XspI	CTAG	5 cut(s)	303, 414, 878, 1607, 1748

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.