Rh6CG121800

DNA mismatch repair protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
Physical Location & Seq
Forward (+)
14351008 .. 14353738
2731 bp
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UTR
Exon/CDS
Intron
Rh6CG121800.1

Sequence Viewer

Length: 210 bp
ATGGACCCTACTCTGGATTTCGAGCTCAAAACTGGAAGGAATGCCACCAAGTTGCAGGCTCCCACAGAAAGTATGTTGTTCACAGTGACTGATGACATTCCACATAAGAGCAGTCAGAGGAAGCTTCCTAGCCAGTTCATTCAGGTGTTGAAACACGGGAATAATATACAATGCTCAGCTTTGGAGCTTGCTTCTGCCAGAAAGCATTGA

Protein Analysis

69

Amino Acids

7.73

Weight (kDa)

8.98

Isoelectric Point (pI)

33.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 13
AgsI TTSAA 1 cut(s) 151
AluBI AGCT 4 cut(s) 25, 124, 179, 187
AluI AGCT 4 cut(s) 25, 124, 179, 187
Alw21I GWGCWC 1 cut(s) 27
AlwNI CAGNNNCTG 1 cut(s) 89
AspS9I GGNCC 1 cut(s) 4
AvaII GGWCC 1 cut(s) 4
BanII GRGCYC 1 cut(s) 27
Bbv12I GWGCWC 1 cut(s) 27
BfaI CTAG 1 cut(s) 129
BlpI GCTNAGC 1 cut(s) 175
Bme18I GGWCC 1 cut(s) 4
BmgT120I GGNCC 1 cut(s) 4
BmiI GGNNCC 2 cut(s) 6, 60
Bpu1102I GCTNAGC 1 cut(s) 175
Bsc4I CCNNNNNNNGG 1 cut(s) 13
Bse1I ACTGG 2 cut(s) 37, 133
BseLI CCNNNNNNNGG 1 cut(s) 13
BseMII CTCAG 1 cut(s) 189
BseNI ACTGG 2 cut(s) 37, 133
BsiHKAI GWGCWC 1 cut(s) 27
BslI CCNNNNNNNGG 1 cut(s) 13
BsmI GAATGC 1 cut(s) 46
Bsp1286I GDGCHC 1 cut(s) 27
Bsp1720I GCTNAGC 1 cut(s) 175
BspCNI CTCAG 1 cut(s) 188
BspLI GGNNCC 2 cut(s) 6, 60
BsrI ACTGG 2 cut(s) 37, 133
Bst4CI ACNGT 1 cut(s) 85
BstC8I GCNNGC 2 cut(s) 57, 189
BstDEI CTNAG 1 cut(s) 175
BtsIMutI CAGTG 1 cut(s) 90
Cac8I GCNNGC 2 cut(s) 57, 189
CaiI CAGNNNCTG 1 cut(s) 89
Cfr13I GGNCC 1 cut(s) 4
CviJI RGCY 6 cut(s) 25, 59, 124, 132, 179, 187
CviKI_1 RGCY 6 cut(s) 25, 59, 124, 132, 179, 187
DdeI CTNAG 1 cut(s) 175
Ecl136II GAGCTC 1 cut(s) 25
Eco24I GRGCYC 1 cut(s) 27
Eco47I GGWCC 1 cut(s) 4
Eco53kI GAGCTC 1 cut(s) 25
EcoICRI GAGCTC 1 cut(s) 25
EcoT38I GRGCYC 1 cut(s) 27
FaiI YATR 3 cut(s) 74, 105, 167
FriOI GRGCYC 1 cut(s) 27
FspBI CTAG 1 cut(s) 129
HindIII AAGCTT 1 cut(s) 122
Hpy166II GTNNAC 1 cut(s) 81
Hpy188I TCNGA 1 cut(s) 117
Hpy188III TCNNGA 1 cut(s) 14
Hpy8I GTNNAC 1 cut(s) 81
HpyAV CCTTC 1 cut(s) 30
HpyCH4III ACNGT 1 cut(s) 85
HpyCH4V TGCA 1 cut(s) 55
HpyF3I CTNAG 1 cut(s) 175
LmnI GCTCC 2 cut(s) 64, 184
LpnPI CCDG 4 cut(s) 18, 41, 128, 146
MaeI CTAG 1 cut(s) 129
MaeIII GTNAC 1 cut(s) 85
MhlI GDGCHC 1 cut(s) 27
MnlI CCTC 1 cut(s) 111
MslI CAYNNNNRTG 1 cut(s) 143
Mva1269I GAATGC 1 cut(s) 46
NlaIV GGNNCC 2 cut(s) 6, 60
NmuCI GTSAC 1 cut(s) 85
PctI GAATGC 1 cut(s) 46
Psp124BI GAGCTC 1 cut(s) 27
PspN4I GGNNCC 2 cut(s) 6, 60
PspPI GGNCC 1 cut(s) 4
PstNI CAGNNNCTG 1 cut(s) 89
RseI CAYNNNNRTG 1 cut(s) 143
SacI GAGCTC 1 cut(s) 27
Sau96I GGNCC 1 cut(s) 4
SduI GDGCHC 1 cut(s) 27
SetI ASST 5 cut(s) 27, 126, 147, 181, 189
SinI GGWCC 1 cut(s) 4
SmiMI CAYNNNNRTG 1 cut(s) 143
SspMI CTAG 1 cut(s) 129
SstI GAGCTC 1 cut(s) 27
TaaI ACNGT 1 cut(s) 85
TaqI TCGA 1 cut(s) 21
TscAI CASTG 1 cut(s) 90
TseFI GTSAC 1 cut(s) 85
Tsp45I GTSAC 1 cut(s) 85
TspDTI ATGAA 1 cut(s) 127
TspRI CASTG 1 cut(s) 90
VpaK11BI GGWCC 1 cut(s) 4
XspI CTAG 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.