Prupe.8G099300_v2.0.a1

Organ-specific protein S2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
13085309 .. 13086471
1163 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G099300.1

Sequence Viewer

Length: 330 bp
ATGAAGTCCCTTTGTGCTATCTTAGCTCTTTTCTCTCTTATTTTGGCAATTGAAGGCCTCCTTATTGATATTTCTGATTCAACACCAAAGGAGAAAGCCGATTGCCATGAAAAAGTGAAAAAACCTTTTGTTGAGGTTGAGGTTGAGGTTGAGGAATTTGAACCCAGACCCAATGTCTCATCCTACAATGATGATGAAACTAAAGCAGAGCTCTCTTCCAAAGACAATGCTGGTCCTAAAGCCAAGCAGTCATTTGCAGCCAAAGAAGATAAGCAGCCATTTGAGGAAGATTTTGAGCCAAGGCCAAATGTTTCGGTTTACAATGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

110

Amino Acids

12.22

Weight (kDa)

4.57

Isoelectric Point (pI)

49.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 155
AgsI TTSAA 3 cut(s) 53, 81, 161
AhdI GACNNNNNGTC 1 cut(s) 173
AluBI AGCT 2 cut(s) 26, 211
AluI AGCT 2 cut(s) 26, 211
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 1 cut(s) 181
AoxI GGCC 2 cut(s) 55, 302
ApeKI GCWGC 2 cut(s) 257, 274
ApoI RAATTY 1 cut(s) 155
AspS9I GGNCC 1 cut(s) 233
AvaII GGWCC 1 cut(s) 233
BanII GRGCYC 1 cut(s) 213
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 2 cut(s) 269, 286
BcoDI GTCTC 1 cut(s) 181
BisI GCNGC 2 cut(s) 258, 275
BlsI GCNGC 2 cut(s) 259, 276
Bme18I GGWCC 1 cut(s) 233
BmeRI GACNNNNNGTC 1 cut(s) 173
BmgT120I GGNCC 1 cut(s) 233
BsaJI CCNNGG 1 cut(s) 299
BseDI CCNNGG 1 cut(s) 299
BseGI GGATG 1 cut(s) 179
BseXI GCAGC 2 cut(s) 269, 286
BshFI GGCC 2 cut(s) 57, 304
BsiHKAI GWGCWC 1 cut(s) 213
BsmAI GTCTC 1 cut(s) 181
BsnI GGCC 2 cut(s) 57, 304
Bsp1286I GDGCHC 1 cut(s) 213
BspANI GGCC 2 cut(s) 57, 304
BssECI CCNNGG 1 cut(s) 299
BssT1I CCWWGG 1 cut(s) 299
Bst6I CTCTTC 1 cut(s) 220
BstDEI CTNAG 1 cut(s) 22
BstF5I GGATG 1 cut(s) 179
BstMAI GTCTC 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 23
BstV1I GCAGC 2 cut(s) 269, 286
BsuRI GGCC 2 cut(s) 57, 304
BtsCI GGATG 1 cut(s) 179
Cfr13I GGNCC 1 cut(s) 233
CviAII CATG 1 cut(s) 107
CviJI RGCY 9 cut(s) 26, 57, 98, 211, 242, 260, 277, 298, 304
CviKI_1 RGCY 9 cut(s) 26, 57, 98, 211, 242, 260, 277, 298, 304
DdeI CTNAG 1 cut(s) 22
DriI GACNNNNNGTC 1 cut(s) 173
Eam1104I CTCTTC 1 cut(s) 220
Eam1105I GACNNNNNGTC 1 cut(s) 173
EarI CTCTTC 1 cut(s) 220
Ecl136II GAGCTC 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 299
Eco147I AGGCCT 1 cut(s) 57
Eco24I GRGCYC 1 cut(s) 213
Eco47I GGWCC 1 cut(s) 233
Eco53kI GAGCTC 1 cut(s) 211
EcoICRI GAGCTC 1 cut(s) 211
EcoT14I CCWWGG 1 cut(s) 299
EcoT38I GRGCYC 1 cut(s) 213
ErhI CCWWGG 1 cut(s) 299
FaeI CATG 1 cut(s) 110
FaiI YATR 1 cut(s) 108
FalI AAGNNNNNCTT 2 cut(s) 45, 77
FatI CATG 1 cut(s) 106
Fnu4HI GCNGC 2 cut(s) 258, 275
FokI GGATG 1 cut(s) 166
FriOI GRGCYC 1 cut(s) 213
Fsp4HI GCNGC 2 cut(s) 258, 275
GluI GCNGC 2 cut(s) 258, 275
HaeIII GGCC 2 cut(s) 57, 304
Hin1II CATG 1 cut(s) 110
HinfI GANTC 1 cut(s) 77
Hpy166II GTNNAC 1 cut(s) 319
Hpy188I TCNGA 1 cut(s) 76
Hpy8I GTNNAC 1 cut(s) 319
HpyAV CCTTC 1 cut(s) 47
HpyCH4V TGCA 1 cut(s) 257
HpyF10VI GCNNNNNNNGC 1 cut(s) 23
HpyF3I CTNAG 1 cut(s) 22
Hsp92II CATG 1 cut(s) 110
LpnPI CCDG 2 cut(s) 178, 216
Lsp1109I GCAGC 2 cut(s) 269, 286
MboII GAAGA 3 cut(s) 207, 278, 299
MfeI CAATTG 1 cut(s) 48
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 2 cut(s) 48, 155
MnlI CCTC 6 cut(s) 68, 127, 133, 139, 145, 277
MunI CAATTG 1 cut(s) 48
MwoI GCNNNNNNNGC 1 cut(s) 23
NlaIII CATG 1 cut(s) 110
PceI AGGCCT 1 cut(s) 57
PfeI GAWTC 1 cut(s) 77
PkrI GCNGC 2 cut(s) 259, 276
Psp124BI GAGCTC 1 cut(s) 213
PspPI GGNCC 1 cut(s) 233
SacI GAGCTC 1 cut(s) 213
SatI GCNGC 2 cut(s) 258, 275
Sau96I GGNCC 1 cut(s) 233
SduI GDGCHC 1 cut(s) 213
SetI ASST 6 cut(s) 28, 127, 138, 144, 150, 213
SgeI CNNG 5 cut(s) 119, 177, 243, 256, 312
SinI GGWCC 1 cut(s) 233
Sse9I AATT 2 cut(s) 48, 155
SseBI AGGCCT 1 cut(s) 57
SstI GAGCTC 1 cut(s) 213
StuI AGGCCT 1 cut(s) 57
StyI CCWWGG 1 cut(s) 299
TasI AATT 2 cut(s) 48, 155
TfiI GAWTC 1 cut(s) 77
TseI GCWGC 2 cut(s) 257, 274
TspDTI ATGAA 3 cut(s) 17, 123, 210
VpaK11BI GGWCC 1 cut(s) 233
XapI RAATTY 1 cut(s) 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.