Rh5AG132100
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
Physical Location & Seq
Reverse (-)
13410557 .. 13432974
22418 bp
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UTR
Exon/CDS
Intron
Rh5AG132100.1

Sequence Viewer

Length: 165 bp
ATGATTTGCTATCAAGATAACAGTCGTAAGCTGTTGGTGTATGAGTTTATGGAAAATGGTGGATTGCAGGAACATTTGTATCCTGTCAGTGGTGAGATTAGTAGAAAGCTGGAAAATGCATACAAGAGTGTTGCACTCCATGAAAGCTCCAACCAAGATGAATGA

Protein Analysis

54

Amino Acids

6.26

Weight (kDa)

4.98

Isoelectric Point (pI)

39.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfiI CCNNNNNNNGG 1 cut(s) 89
AluBI AGCT 3 cut(s) 31, 109, 147
AluI AGCT 3 cut(s) 31, 109, 147
AsuHPI GGTGA 1 cut(s) 104
BaeI ACNNNNGTAYC 2 cut(s) 62, 95
BciVI GTATCC 1 cut(s) 90
BfuI GTATCC 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 89
BseLI CCNNNNNNNGG 1 cut(s) 89
BslI CCNNNNNNNGG 1 cut(s) 89
Bst4CI ACNGT 1 cut(s) 23
BsuI GTATCC 1 cut(s) 90
BtsIMutI CAGTG 1 cut(s) 94
CviAII CATG 1 cut(s) 140
CviJI RGCY 3 cut(s) 31, 109, 147
CviKI_1 RGCY 3 cut(s) 31, 109, 147
EcoT22I ATGCAT 1 cut(s) 121
FaeI CATG 1 cut(s) 143
FaiI YATR 4 cut(s) 42, 50, 121, 141
FatI CATG 1 cut(s) 139
FspEI CC 9 cut(s) 20, 35, 42, 45, 53, 75, 95, 96, 152
Hin1II CATG 1 cut(s) 143
HphI GGTGA 1 cut(s) 104
Hpy188III TCNNGA 1 cut(s) 14
HpyCH4III ACNGT 1 cut(s) 23
HpyCH4V TGCA 3 cut(s) 67, 119, 134
Hsp92II CATG 1 cut(s) 143
LmnI GCTCC 1 cut(s) 152
LpnPI CCDG 3 cut(s) 53, 95, 96
Mph1103I ATGCAT 1 cut(s) 121
NlaIII CATG 1 cut(s) 143
NsiI ATGCAT 1 cut(s) 121
SetI ASST 3 cut(s) 33, 111, 149
SgeI CNNG 6 cut(s) 26, 80, 95, 122, 136, 152
TaaI ACNGT 1 cut(s) 23
TscAI CASTG 1 cut(s) 94
TspDTI ATGAA 1 cut(s) 156
TspRI CASTG 1 cut(s) 94
Zsp2I ATGCAT 1 cut(s) 121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.