Prupe.8G099400_v2.0.a1

Organ-specific protein S2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
13095534 .. 13096647
1114 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G099400.1

Sequence Viewer

Length: 414 bp
ATGAAGTCCATTTGTGCTATCTTGGCTCTTTTCTCTCTTCTTTTGTTTGCCAAAACTATAGATTCAAGAAGAGATGTCGGGAAATACTGGAAAAAGGTCATGAAAGAGCAACCTATGCCACAGGCAATTGAAGGCCTCCTTGTTGATATTTCTGATTCAACACCAAAAGAGAAAGCCGACTGCCATGAAAAAGTGAAAAAACCTTTTGTTGAGGTTGAGGTTGAGGTTGAGGTTGAGGAATTTGAACCCAGACCCAGTGCCACATCCTACAATGATCATGAAACTAAAGCAGAGCTCTCTTCCAAAGACAATGCTGGTCCTAAAGCGAAGCAGTCATTTGCAGCAAAAGAAGATAAGCAGCCATTTGAGGAAGATTTTGAGCCAAGGCCAAATGTTTCGGTTTACAATGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

138

Amino Acids

15.56

Weight (kDa)

5.09

Isoelectric Point (pI)

50.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 239
AgsI TTSAA 4 cut(s) 66, 131, 159, 245
AluBI AGCT 1 cut(s) 295
AluI AGCT 1 cut(s) 295
Alw21I GWGCWC 1 cut(s) 297
AoxI GGCC 2 cut(s) 133, 386
ApeKI GCWGC 2 cut(s) 341, 358
ApoI RAATTY 1 cut(s) 239
AspS9I GGNCC 1 cut(s) 317
AvaII GGWCC 1 cut(s) 317
BanII GRGCYC 1 cut(s) 297
Bbv12I GWGCWC 1 cut(s) 297
BbvI GCAGC 2 cut(s) 353, 370
BclI TGATCA 1 cut(s) 274
BfmI CTRYAG 1 cut(s) 57
BisI GCNGC 2 cut(s) 342, 359
BlsI GCNGC 2 cut(s) 343, 360
Bme18I GGWCC 1 cut(s) 317
BmgT120I GGNCC 1 cut(s) 317
BmrI ACTGGG 1 cut(s) 249
BmuI ACTGGG 1 cut(s) 249
BsaJI CCNNGG 1 cut(s) 383
Bse1I ACTGG 2 cut(s) 92, 255
BseDI CCNNGG 1 cut(s) 383
BseGI GGATG 1 cut(s) 263
BseNI ACTGG 2 cut(s) 92, 255
BseXI GCAGC 2 cut(s) 353, 370
BshFI GGCC 2 cut(s) 135, 388
BsiHKAI GWGCWC 1 cut(s) 297
BsnI GGCC 2 cut(s) 135, 388
Bsp1286I GDGCHC 1 cut(s) 297
Bsp143I GATC 1 cut(s) 274
BspANI GGCC 2 cut(s) 135, 388
BspHI TCATGA 2 cut(s) 99, 277
BsrI ACTGG 2 cut(s) 92, 255
BssECI CCNNGG 1 cut(s) 383
BssMI GATC 1 cut(s) 274
BssT1I CCWWGG 1 cut(s) 383
Bst6I CTCTTC 3 cut(s) 42, 64, 304
BstAPI GCANNNNNTGC 1 cut(s) 115
BstF5I GGATG 1 cut(s) 263
BstKTI GATC 1 cut(s) 277
BstMBI GATC 1 cut(s) 274
BstMWI GCNNNNNNNGC 2 cut(s) 23, 115
BstSFI CTRYAG 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 353, 370
BsuRI GGCC 2 cut(s) 135, 388
BtsCI GGATG 1 cut(s) 263
BtsIMutI CAGTG 1 cut(s) 262
CciI TCATGA 2 cut(s) 99, 277
Cfr13I GGNCC 1 cut(s) 317
CviAII CATG 3 cut(s) 100, 185, 278
CviJI RGCY 7 cut(s) 26, 135, 176, 295, 361, 382, 388
CviKI_1 RGCY 7 cut(s) 26, 135, 176, 295, 361, 382, 388
DpnI GATC 1 cut(s) 276
DpnII GATC 1 cut(s) 274
Eam1104I CTCTTC 3 cut(s) 42, 64, 304
EarI CTCTTC 3 cut(s) 42, 64, 304
Ecl136II GAGCTC 1 cut(s) 295
Eco130I CCWWGG 1 cut(s) 383
Eco147I AGGCCT 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 297
Eco47I GGWCC 1 cut(s) 317
Eco53kI GAGCTC 1 cut(s) 295
EcoICRI GAGCTC 1 cut(s) 295
EcoT14I CCWWGG 1 cut(s) 383
EcoT38I GRGCYC 1 cut(s) 297
ErhI CCWWGG 1 cut(s) 383
FaeI CATG 3 cut(s) 103, 188, 281
FaiI YATR 5 cut(s) 59, 101, 116, 186, 279
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FatI CATG 3 cut(s) 99, 184, 277
FbaI TGATCA 1 cut(s) 274
Fnu4HI GCNGC 2 cut(s) 342, 359
FokI GGATG 1 cut(s) 250
FriOI GRGCYC 1 cut(s) 297
Fsp4HI GCNGC 2 cut(s) 342, 359
GluI GCNGC 2 cut(s) 342, 359
HaeIII GGCC 2 cut(s) 135, 388
Hin1II CATG 3 cut(s) 103, 188, 281
HinfI GANTC 2 cut(s) 62, 155
Hpy166II GTNNAC 1 cut(s) 403
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 4 cut(s) 66, 79, 100, 278
Hpy8I GTNNAC 1 cut(s) 403
HpyAV CCTTC 1 cut(s) 125
HpyCH4V TGCA 1 cut(s) 341
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 115
Hsp92II CATG 3 cut(s) 103, 188, 281
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 1 cut(s) 274
LpnPI CCDG 5 cut(s) 73, 107, 262, 268, 300
Lsp1109I GCAGC 2 cut(s) 353, 370
MalI GATC 1 cut(s) 276
MboI GATC 1 cut(s) 274
MboII GAAGA 5 cut(s) 29, 81, 291, 362, 383
MfeI CAATTG 1 cut(s) 126
MhlI GDGCHC 1 cut(s) 297
MluCI AATT 2 cut(s) 126, 239
MnlI CCTC 7 cut(s) 146, 205, 211, 217, 223, 229, 361
MunI CAATTG 1 cut(s) 126
MwoI GCNNNNNNNGC 2 cut(s) 23, 115
NdeII GATC 1 cut(s) 274
NlaIII CATG 3 cut(s) 103, 188, 281
PagI TCATGA 2 cut(s) 99, 277
PceI AGGCCT 1 cut(s) 135
PfeI GAWTC 2 cut(s) 62, 155
PkrI GCNGC 2 cut(s) 343, 360
Psp124BI GAGCTC 1 cut(s) 297
PspPI GGNCC 1 cut(s) 317
SacI GAGCTC 1 cut(s) 297
SatI GCNGC 2 cut(s) 342, 359
Sau3AI GATC 1 cut(s) 274
Sau96I GGNCC 1 cut(s) 317
SduI GDGCHC 1 cut(s) 297
SetI ASST 8 cut(s) 99, 115, 205, 216, 222, 228, 234, 297
SfcI CTRYAG 1 cut(s) 57
SinI GGWCC 1 cut(s) 317
Sse9I AATT 2 cut(s) 126, 239
SseBI AGGCCT 1 cut(s) 135
SstI GAGCTC 1 cut(s) 297
StuI AGGCCT 1 cut(s) 135
StyI CCWWGG 1 cut(s) 383
TasI AATT 2 cut(s) 126, 239
TfiI GAWTC 2 cut(s) 62, 155
TscAI CASTG 1 cut(s) 262
TseI GCWGC 2 cut(s) 341, 358
TspDTI ATGAA 4 cut(s) 17, 116, 201, 294
TspRI CASTG 1 cut(s) 262
VpaK11BI GGWCC 1 cut(s) 317
XapI RAATTY 1 cut(s) 239
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.