Organ-specific protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 438 |
| AfaI | GTAC | 1 cut(s) | 289 |
| AgsI | TTSAA | 4 cut(s) | 107, 296, 374, 413 |
| AluBI | AGCT | 1 cut(s) | 26 |
| AluI | AGCT | 1 cut(s) | 26 |
| ApeKI | GCWGC | 2 cut(s) | 112, 364 |
| AspLEI | GCGC | 1 cut(s) | 336 |
| BbsI | GAAGAC | 2 cut(s) | 303, 411 |
| BbvI | GCAGC | 2 cut(s) | 124, 376 |
| BccI | CCATC | 2 cut(s) | 26, 263 |
| BfaI | CTAG | 1 cut(s) | 222 |
| BfmI | CTRYAG | 1 cut(s) | 57 |
| BisI | GCNGC | 2 cut(s) | 113, 365 |
| BlsI | GCNGC | 2 cut(s) | 114, 366 |
| BmcAI | AGTACT | 1 cut(s) | 289 |
| BmsI | GCATC | 1 cut(s) | 404 |
| BpiI | GAAGAC | 2 cut(s) | 303, 411 |
| Bse1I | ACTGG | 1 cut(s) | 285 |
| BseNI | ACTGG | 1 cut(s) | 285 |
| BseXI | GCAGC | 2 cut(s) | 124, 376 |
| BsmI | GAATGC | 1 cut(s) | 397 |
| Bsp143I | GATC | 2 cut(s) | 172, 211 |
| BspHI | TCATGA | 2 cut(s) | 141, 352 |
| BsrI | ACTGG | 1 cut(s) | 285 |
| BssMI | GATC | 2 cut(s) | 172, 211 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 118 |
| BstDEI | CTNAG | 1 cut(s) | 22 |
| BstHHI | GCGC | 1 cut(s) | 336 |
| BstKTI | GATC | 2 cut(s) | 175, 214 |
| BstMBI | GATC | 2 cut(s) | 172, 211 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 23, 118 |
| BstNSI | RCATGY | 1 cut(s) | 334 |
| BstSFI | CTRYAG | 1 cut(s) | 57 |
| BstV1I | GCAGC | 2 cut(s) | 124, 376 |
| BstV2I | GAAGAC | 2 cut(s) | 303, 411 |
| CciI | TCATGA | 2 cut(s) | 141, 352 |
| CfoI | GCGC | 1 cut(s) | 336 |
| Csp6I | GTAC | 1 cut(s) | 288 |
| CviAII | CATG | 6 cut(s) | 118, 142, 209, 331, 353, 388 |
| CviJI | RGCY | 8 cut(s) | 26, 87, 115, 304, 367, 377, 383, 421 |
| CviKI_1 | RGCY | 8 cut(s) | 26, 87, 115, 304, 367, 377, 383, 421 |
| CviQI | GTAC | 1 cut(s) | 288 |
| DdeI | CTNAG | 1 cut(s) | 22 |
| DpnI | GATC | 2 cut(s) | 174, 213 |
| DpnII | GATC | 2 cut(s) | 172, 211 |
| EcoT22I | ATGCAT | 1 cut(s) | 397 |
| FaeI | CATG | 6 cut(s) | 121, 145, 212, 334, 356, 391 |
| FatI | CATG | 6 cut(s) | 117, 141, 208, 330, 352, 387 |
| FauNDI | CATATG | 1 cut(s) | 237 |
| Fnu4HI | GCNGC | 2 cut(s) | 113, 365 |
| Fsp4HI | GCNGC | 2 cut(s) | 113, 365 |
| FspBI | CTAG | 1 cut(s) | 222 |
| GlaI | GCGC | 1 cut(s) | 335 |
| GluI | GCNGC | 2 cut(s) | 113, 365 |
| HhaI | GCGC | 1 cut(s) | 336 |
| Hin1II | CATG | 6 cut(s) | 121, 145, 212, 334, 356, 391 |
| Hin6I | GCGC | 1 cut(s) | 334 |
| HinP1I | GCGC | 1 cut(s) | 334 |
| HinfI | GANTC | 3 cut(s) | 62, 308, 413 |
| Hpy166II | GTNNAC | 1 cut(s) | 48 |
| Hpy188I | TCNGA | 3 cut(s) | 181, 216, 400 |
| Hpy188III | TCNNGA | 4 cut(s) | 69, 142, 293, 353 |
| Hpy8I | GTNNAC | 1 cut(s) | 48 |
| HpyCH4V | TGCA | 3 cut(s) | 80, 364, 395 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 23, 118 |
| HpyF3I | CTNAG | 1 cut(s) | 22 |
| Hsp92II | CATG | 6 cut(s) | 121, 145, 212, 334, 356, 391 |
| HspAI | GCGC | 1 cut(s) | 334 |
| Kzo9I | GATC | 2 cut(s) | 172, 211 |
| LpnPI | CCDG | 3 cut(s) | 66, 298, 318 |
| Lsp1109I | GCAGC | 2 cut(s) | 124, 376 |
| LweI | GCATC | 1 cut(s) | 404 |
| MaeI | CTAG | 1 cut(s) | 222 |
| MaeIII | GTNAC | 1 cut(s) | 326 |
| MalI | GATC | 2 cut(s) | 174, 213 |
| MboI | GATC | 2 cut(s) | 172, 211 |
| MboII | GAAGA | 3 cut(s) | 308, 368, 416 |
| MluCI | AATT | 1 cut(s) | 321 |
| MnlI | CCTC | 1 cut(s) | 77 |
| Mph1103I | ATGCAT | 1 cut(s) | 397 |
| MseI | TTAA | 2 cut(s) | 248, 315 |
| Mva1269I | GAATGC | 1 cut(s) | 397 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 23, 118 |
| NdeI | CATATG | 1 cut(s) | 237 |
| NdeII | GATC | 2 cut(s) | 172, 211 |
| NlaIII | CATG | 6 cut(s) | 121, 145, 212, 334, 356, 391 |
| NsiI | ATGCAT | 1 cut(s) | 397 |
| NspI | RCATGY | 1 cut(s) | 334 |
| PagI | TCATGA | 2 cut(s) | 141, 352 |
| PctI | GAATGC | 1 cut(s) | 397 |
| PfeI | GAWTC | 3 cut(s) | 62, 308, 413 |
| PkrI | GCNGC | 2 cut(s) | 114, 366 |
| PsiI | TTATAA | 1 cut(s) | 438 |
| RsaI | GTAC | 1 cut(s) | 289 |
| RsaNI | GTAC | 1 cut(s) | 288 |
| SaqAI | TTAA | 2 cut(s) | 248, 315 |
| SatI | GCNGC | 2 cut(s) | 113, 365 |
| Sau3AI | GATC | 2 cut(s) | 172, 211 |
| ScaI | AGTACT | 1 cut(s) | 289 |
| SetI | ASST | 2 cut(s) | 28, 223 |
| SfaNI | GCATC | 1 cut(s) | 404 |
| SfcI | CTRYAG | 1 cut(s) | 57 |
| Sse9I | AATT | 1 cut(s) | 321 |
| SspMI | CTAG | 1 cut(s) | 222 |
| TasI | AATT | 1 cut(s) | 321 |
| TatI | WGTACW | 1 cut(s) | 287 |
| TfiI | GAWTC | 3 cut(s) | 62, 308, 413 |
| Tru1I | TTAA | 2 cut(s) | 248, 315 |
| Tru9I | TTAA | 2 cut(s) | 248, 315 |
| TseI | GCWGC | 2 cut(s) | 112, 364 |
| TspDTI | ATGAA | 6 cut(s) | 17, 158, 224, 369, 404, 417 |
| XceI | RCATGY | 1 cut(s) | 334 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 129 |
| XspI | CTAG | 1 cut(s) | 222 |
| ZrmI | AGTACT | 1 cut(s) | 289 |
| Zsp2I | ATGCAT | 1 cut(s) | 397 |