Prupe.8G099600_v2.0.a1

Organ-specific protein S2-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
13107301 .. 13108495
1195 bp
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UTR
Exon/CDS
Intron
Prupe.8G099600.1

Sequence Viewer

Length: 408 bp
ATGAAGTCCCTTTGTGCTATCTTGGCTCTTTTCTCTCTTCTTTTGTTTGCCAAAACTATAGATTCAAGAAGAGATGTCGGGAAATACTGGAAAAATGTCATGAAAGAGCAACCTATGCCACAGGCAATTGAAGGCCTCCTTATTGATATTTCTGATTCAACACCAAAGGAGAAAGCCGATTGCCATGAAAAAGTGAAAAAACCTTTTGTTGAGGTTGAGGTTGAGGTTGAGGAATTTGAACCCAGACCCAATGTCTCATCCTACAATGATGATGAAACTAAAGCAGAGCTCTCTTCCAAAGACAATGCTGGTCCTAAAGCCAAGCAGTCATTTGCAGCAAAAGAAGATAAGCAGCCATTTGAGGAAGATTTTGAGCCAAGGCCAAATGTTTCGGTTTACAAAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

136

Amino Acids

15.37

Weight (kDa)

4.98

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 233
AgsI TTSAA 4 cut(s) 66, 131, 159, 239
AhdI GACNNNNNGTC 1 cut(s) 251
AluBI AGCT 1 cut(s) 289
AluI AGCT 1 cut(s) 289
Alw21I GWGCWC 1 cut(s) 291
Alw26I GTCTC 1 cut(s) 259
AoxI GGCC 2 cut(s) 133, 380
ApeKI GCWGC 2 cut(s) 335, 352
ApoI RAATTY 1 cut(s) 233
AspS9I GGNCC 1 cut(s) 311
AvaII GGWCC 1 cut(s) 311
BanII GRGCYC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 291
BbvI GCAGC 2 cut(s) 347, 364
BcoDI GTCTC 1 cut(s) 259
BfmI CTRYAG 1 cut(s) 57
BisI GCNGC 2 cut(s) 336, 353
BlsI GCNGC 2 cut(s) 337, 354
Bme18I GGWCC 1 cut(s) 311
BmeRI GACNNNNNGTC 1 cut(s) 251
BmgT120I GGNCC 1 cut(s) 311
BsaJI CCNNGG 1 cut(s) 377
Bse1I ACTGG 1 cut(s) 92
BseDI CCNNGG 1 cut(s) 377
BseGI GGATG 1 cut(s) 257
BseNI ACTGG 1 cut(s) 92
BseXI GCAGC 2 cut(s) 347, 364
BshFI GGCC 2 cut(s) 135, 382
BsiHKAI GWGCWC 1 cut(s) 291
BsmAI GTCTC 1 cut(s) 259
BsnI GGCC 2 cut(s) 135, 382
Bsp1286I GDGCHC 1 cut(s) 291
BspANI GGCC 2 cut(s) 135, 382
BspHI TCATGA 1 cut(s) 99
BsrI ACTGG 1 cut(s) 92
BssECI CCNNGG 1 cut(s) 377
BssT1I CCWWGG 1 cut(s) 377
Bst6I CTCTTC 3 cut(s) 42, 64, 298
BstAPI GCANNNNNTGC 1 cut(s) 115
BstF5I GGATG 1 cut(s) 257
BstMAI GTCTC 1 cut(s) 259
BstMWI GCNNNNNNNGC 2 cut(s) 23, 115
BstSFI CTRYAG 1 cut(s) 57
BstV1I GCAGC 2 cut(s) 347, 364
BsuRI GGCC 2 cut(s) 135, 382
BtsCI GGATG 1 cut(s) 257
CciI TCATGA 1 cut(s) 99
Cfr13I GGNCC 1 cut(s) 311
CviAII CATG 2 cut(s) 100, 185
CviJI RGCY 8 cut(s) 26, 135, 176, 289, 320, 355, 376, 382
CviKI_1 RGCY 8 cut(s) 26, 135, 176, 289, 320, 355, 376, 382
DriI GACNNNNNGTC 1 cut(s) 251
Eam1104I CTCTTC 3 cut(s) 42, 64, 298
Eam1105I GACNNNNNGTC 1 cut(s) 251
EarI CTCTTC 3 cut(s) 42, 64, 298
Ecl136II GAGCTC 1 cut(s) 289
Eco130I CCWWGG 1 cut(s) 377
Eco147I AGGCCT 1 cut(s) 135
Eco24I GRGCYC 1 cut(s) 291
Eco47I GGWCC 1 cut(s) 311
Eco53kI GAGCTC 1 cut(s) 289
EcoICRI GAGCTC 1 cut(s) 289
EcoT14I CCWWGG 1 cut(s) 377
EcoT38I GRGCYC 1 cut(s) 291
ErhI CCWWGG 1 cut(s) 377
FaeI CATG 2 cut(s) 103, 188
FaiI YATR 4 cut(s) 59, 101, 116, 186
FalI AAGNNNNNCTT 2 cut(s) 123, 155
FatI CATG 2 cut(s) 99, 184
Fnu4HI GCNGC 2 cut(s) 336, 353
FokI GGATG 1 cut(s) 244
FriOI GRGCYC 1 cut(s) 291
Fsp4HI GCNGC 2 cut(s) 336, 353
GluI GCNGC 2 cut(s) 336, 353
HaeIII GGCC 2 cut(s) 135, 382
Hin1II CATG 2 cut(s) 103, 188
HinfI GANTC 2 cut(s) 62, 155
Hpy166II GTNNAC 1 cut(s) 397
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 3 cut(s) 66, 79, 100
Hpy8I GTNNAC 1 cut(s) 397
HpyAV CCTTC 1 cut(s) 125
HpyCH4V TGCA 1 cut(s) 335
HpyF10VI GCNNNNNNNGC 2 cut(s) 23, 115
Hsp92II CATG 2 cut(s) 103, 188
LpnPI CCDG 4 cut(s) 73, 107, 256, 294
Lsp1109I GCAGC 2 cut(s) 347, 364
MboII GAAGA 5 cut(s) 29, 81, 285, 356, 377
MfeI CAATTG 1 cut(s) 126
MhlI GDGCHC 1 cut(s) 291
MluCI AATT 2 cut(s) 126, 233
MnlI CCTC 6 cut(s) 146, 205, 211, 217, 223, 355
MunI CAATTG 1 cut(s) 126
MwoI GCNNNNNNNGC 2 cut(s) 23, 115
NlaIII CATG 2 cut(s) 103, 188
PagI TCATGA 1 cut(s) 99
PceI AGGCCT 1 cut(s) 135
PfeI GAWTC 2 cut(s) 62, 155
PkrI GCNGC 2 cut(s) 337, 354
Psp124BI GAGCTC 1 cut(s) 291
PspPI GGNCC 1 cut(s) 311
SacI GAGCTC 1 cut(s) 291
SatI GCNGC 2 cut(s) 336, 353
Sau96I GGNCC 1 cut(s) 311
SduI GDGCHC 1 cut(s) 291
SetI ASST 6 cut(s) 115, 205, 216, 222, 228, 291
SfcI CTRYAG 1 cut(s) 57
SinI GGWCC 1 cut(s) 311
Sse9I AATT 2 cut(s) 126, 233
SseBI AGGCCT 1 cut(s) 135
SstI GAGCTC 1 cut(s) 291
StuI AGGCCT 1 cut(s) 135
StyI CCWWGG 1 cut(s) 377
TasI AATT 2 cut(s) 126, 233
TfiI GAWTC 2 cut(s) 62, 155
TseI GCWGC 2 cut(s) 335, 352
TspDTI ATGAA 4 cut(s) 17, 116, 201, 288
VpaK11BI GGWCC 1 cut(s) 311
XapI RAATTY 1 cut(s) 233
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.