Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0001249

Physical Location & Seq

Genomic Coordinates Forward (+)

7819834 .. 7827696

Gene Structure 7863 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G003950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGGCCACATTCCCAACTATTGACAAATGCAAATCAAATGATCGGAAAAGCGCGACGGTTGTGGTAGCTGATATGGTTGGATGCTTGCTCAGAGATGATAGCTCTTTCCCTTACTTTGCCCTCATCGCGTTTGATGTTGGTGGGATCGTAAGGCTCCTCTTGCTACTCTTAGTTTGGCCATTATCTAGACTCCTCTATTACTTTGTATCAGAATCCGCAGCAACACGAGTCCTTATCTTTGCAACATTTGCTGCTGTGAATGTGTCTAAGATCGAGTCAGCGGCAACAGCCGTGCTGCCCAAGTTTTACTCGAGTGATCTACACCCCGATACTTGGCGTATGATTTCTGCATGTGAAAAGCGGTGTATTGTCACTGCAAGTATTCCGAGGATCATGGCGGAGCCATTTCTCAAGAGTTACCTTGGATTTGATATGGTTTTGGGGACTGAGATAGCAACTTATAATGGTATAGCCACTGGCTTTGTTTGCCCACCTGGAGTACTTATAGGACAGCATAAAGCAGATGCTCTTCATAAGGCTTTCGGAGCGAAAGCCCAGCCAGATATTGGAATTGGCCATAAGCACACTGATATTGCTTTGATTGGCATGTGCAAGGAGGGTTATATAGTGCCAGCCAAACCCACACTAGAAGCTGTGAGAAGGGAGGAGCTCCCAAAGCCCATCATTTTCCATGACGGTCGCCTAGTCCAAAAGCCAACACCTCTCTTAGCGTTCCTCATCATTCTTTGGTTCCCCATAGGTTTCTTTATCGCTTGCTTGCGAATTGCTATTTTGTCGCTCCTTCCTCAGAGCCTCGCCTACTACGCCCTTTGGGCACTTGGTATTCGTGTCATTGTGAATGGCACCCCACCTACATTCGCTAAACACACTATTGGTCGTAAAAACTCTGGTCAGATCTTTATCTCGAACCATAGAACTGTTCTTGATGCATTTTTCATCTATCTTGCCCTAGGCTACCCAATAACCGGTCCCACGTACTCAACCACTCGACTCTTGGAGTTCCTTTCACCATTCAAGGTTGTCCGAATAAGTCGTAACCGAGAACAGGATGCGGCCACGATCAAGAAGCTTCTACAAGAAGGTAATAACATATACCTTTGCCCGGAGGGAACCACTTGTAGGGAACCATATGTTTTAAGGTTTTCGGCATTATTTGCTGAATTAAGTGACCAACTTGTCCCTGTGGCCATCGTCAGCCACCAGAGCATGTTTCATGGAACCACAGTTCGAGGGTGGAAAGCAATGGACCCGTTTTTCTTCTCGATGAACCCGTTTCCATCATATGAAGTCACATTCTTGAATAAGTTGGCTCCAGAACAAACATGCAATGCTACTTCTGGAAAGACTAGCTTTGAGGTAGCAAATTACGTACAAAGGATTATAGCTGCAACTCTTTCTTACGAGTGCACTAGGCTTACAAGGAAGGACAAGTATTGGGTTCTTGCGGGGAATGATGGGAATGTGGTTAGAACAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0005575 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009059 GO:0009791 GO:0009908 GO:0009987 GO:0010143 GO:0016020 GO:0016311 GO:0016740 GO:0016746 GO:0016747 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0043170 GO:0044237 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0071704 GO:0090447 GO:0090567 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 map00561 map00564 map01100 map01110

Pfam Domains

Protein Families

Acyltransferase HAD

Protein Analysis

499

Amino Acids

55.39

Weight (kDa)

9.16

Isoelectric Point (pI)

36.15

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAD_RAM2_N	PF23270	21 - 210	4.4e-55	Glycerol-3-phosphate acyltransferase RAM2-like, HAD-like domain
HAD	PF12710	21 - 199	1.5e-14	haloacid dehalogenase-like hydrolase
Acyltransferase	PF01553	301 - 404	6.9e-09	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001249)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g08570 FvH4_4g03930 FvH4_4g35510 FvH4_6g49610
malus_domestica	MD09G1043100.v1.1 MD12G1162100.v1.1 MD13G1082600.v1.1 MD16G1081700.v1.1 MD17G1044600.v1.1
prunus_persica	Prupe.1G264300_v2.0.a1 Prupe.3G274600_v2.0.a1
pyrus_communis	pycom111g03370 pycom16g07050
rosa_chinensis	RchiOBHm_Chr2g0169641 RchiOBHm_Chr4g0393951 RchiOBHm_Chr4g0445161 RchiOBHm_Chr6g0263921
rosa_laevigata	RLG00000005762 RLG00000009723 RLG00000014303 RLG00000021890
rosa_multiflora	Rmu_co8152054.1_g000001 Rmu_co8379785.1_g000001 Rmu_sc0000050.1_g000041 Rmu_sc0000363.1_g000001 Rmu_sc0002112.1_g000017 Rmu_sc0002720.1_g000011 Rmu_sc0013280.1_g000008
rosa_roxburghii	Rroxscaffold_176G00431300 Rroxscaffold_2G00081930 Rroxscaffold_7G00203770
rosa_rugosa	Rorug02G0541700 Rorug03G0369800.1 Rorug04G0359500 Rorug06G0006900
rosa_samantha	Rh2AG614100 Rh2BG626300 Rh2CG595600 Rh2DG637200 Rh4AG050000 Rh4AG420300 Rh4BG046400 Rh4BG432100 Rh4CG053400 Rh4CG446700 Rh4DG047000 Rh4DG428200 Rh6AG127000 Rh6BG123200 Rh6CG121700 Rh6DG109100
rosa_wichuraiana	Rw2G050890 Rw4G003950 Rw4G018340 Rw4G036040 Rw6G011030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	462
AasI	GACNNNNNNGTC	1 cut(s)	1196
AccB1I	GGYRCC	1 cut(s)	863
AccB7I	CCANNNNNTGG	1 cut(s)	566
AccII	CGCG	2 cut(s)	53, 128
AciI	CCGC	6 cut(s)	216, 281, 361, 398, 1073, 1466
AclWI	GGATC	2 cut(s)	152, 398
AcoI	YGGCCR	5 cut(s)	3, 176, 574, 1074, 1206
AfaI	GTAC	3 cut(s)	501, 998, 1392
AfiI	CCNNNNNNNGG	6 cut(s)	333, 566, 986, 1066, 1123, 1140
AgeI	ACCGGT	1 cut(s)	986
AgsI	TTSAA	2 cut(s)	1036, 1321
AjnI	CCWGG	1 cut(s)	493
AloI	GAACNNNNNNTCC	2 cut(s)	1230, 1262
AluBI	AGCT	8 cut(s)	68, 102, 653, 670, 1090, 1371, 1406, 1496
AluI	AGCT	8 cut(s)	68, 102, 653, 670, 1090, 1371, 1406, 1496
Alw21I	GWGCWC	2 cut(s)	672, 1430
Alw44I	GTGCAC	1 cut(s)	1426
AlwI	GGATC	2 cut(s)	152, 398
Ama87I	CYCGRG	1 cut(s)	310
AoxI	GGCC	5 cut(s)	3, 176, 574, 1074, 1206
ApaLI	GTGCAC	1 cut(s)	1426
ApeKI	GCWGC	4 cut(s)	218, 251, 295, 1406
AsiGI	ACCGGT	1 cut(s)	986
AspA2I	CCTAGG	1 cut(s)	970
AspLEI	GCGC	1 cut(s)	53
AspS9I	GGNCC	2 cut(s)	989, 1267
AsuC2I	CCSGG	1 cut(s)	1124
AsuHPI	GGTGA	1 cut(s)	1020
AvaI	CYCGRG	1 cut(s)	310
AvaII	GGWCC	2 cut(s)	989, 1267
AvrII	CCTAGG	1 cut(s)	970
BaeGI	GKGCMC	2 cut(s)	838, 1430
BalI	TGGCCA	4 cut(s)	5, 178, 576, 1208
BanI	GGYRCC	1 cut(s)	863
BanII	GRGCYC	1 cut(s)	672
BauI	CACGAG	1 cut(s)	225
Bbv12I	GWGCWC	2 cut(s)	672, 1430
BbvI	GCAGC	4 cut(s)	230, 238, 282, 1393
BccI	CCATC	4 cut(s)	689, 1217, 1306, 1469
BceAI	ACGGC	1 cut(s)	275
BciT130I	CCWGG	1 cut(s)	495
BcnI	CCSGG	1 cut(s)	1124
BfaI	CTAG	6 cut(s)	186, 647, 704, 971, 1368, 1431
BglI	GCCNNNNNGGC	1 cut(s)	833
BglII	AGATCT	1 cut(s)	915
BisI	GCNGC	6 cut(s)	219, 252, 282, 296, 1074, 1407
BlnI	CCTAGG	1 cut(s)	970
BlsI	GCNGC	6 cut(s)	220, 253, 283, 297, 1075, 1408
BmcAI	AGTACT	1 cut(s)	501
Bme1390I	CCNGG	2 cut(s)	495, 1124
Bme18I	GGWCC	2 cut(s)	989, 1267
BmeT110I	CYCGRG	1 cut(s)	310
BmgT120I	GGNCC	2 cut(s)	989, 1267
BmrFI	CCNGG	2 cut(s)	495, 1124
BmsI	GCATC	4 cut(s)	71, 514, 937, 1060
BpmI	CTGGAG	2 cut(s)	516, 1317
BpuEI	CTTGAG	1 cut(s)	395
BpuMI	CCSGG	1 cut(s)	1124
BsaAI	YACGTR	2 cut(s)	996, 1390
BsaBI	GATNNNNATC	1 cut(s)	920
BsaJI	CCNNGG	3 cut(s)	386, 421, 970
BsaWI	WCCGGW	1 cut(s)	986
Bsc4I	CCNNNNNNNGG	6 cut(s)	333, 566, 986, 1066, 1123, 1140
Bse118I	RCCGGY	1 cut(s)	986
Bse1I	ACTGG	1 cut(s)	481
Bse3DI	GCAATG	2 cut(s)	1269, 1354
Bse8I	GATNNNNATC	1 cut(s)	920
BseBI	CCWGG	1 cut(s)	495
BseDI	CCNNGG	3 cut(s)	386, 421, 970
BseGI	GGATG	2 cut(s)	86, 1075
BseJI	GATNNNNATC	1 cut(s)	920
BseLI	CCNNNNNNNGG	6 cut(s)	333, 566, 986, 1066, 1123, 1140
BseMI	GCAATG	2 cut(s)	1269, 1354
BseMII	CTCAG	3 cut(s)	103, 438, 821
BseNI	ACTGG	1 cut(s)	481
BseRI	GAGGAG	3 cut(s)	146, 182, 680
BseSI	GKGCMC	2 cut(s)	838, 1430
BseXI	GCAGC	4 cut(s)	230, 238, 282, 1393
BseYI	CCCAGC	1 cut(s)	555
Bsh1236I	CGCG	2 cut(s)	53, 128
Bsh1285I	CGRYCG	1 cut(s)	700
BshFI	GGCC	5 cut(s)	5, 178, 576, 1076, 1208
BshNI	GGYRCC	1 cut(s)	863
BshTI	ACCGGT	1 cut(s)	986
BsiEI	CGRYCG	1 cut(s)	700
BsiHKAI	GWGCWC	2 cut(s)	672, 1430
BsiHKCI	CYCGRG	1 cut(s)	310
BsiSI	CCGG	2 cut(s)	987, 1124
BslFI	GGGAC	3 cut(s)	457, 975, 1184
BslI	CCNNNNNNNGG	6 cut(s)	333, 566, 986, 1066, 1123, 1140
BsmFI	GGGAC	3 cut(s)	457, 975, 1184
BsnI	GGCC	5 cut(s)	5, 178, 576, 1076, 1208
BsoBI	CYCGRG	1 cut(s)	310
Bsp1286I	GDGCHC	3 cut(s)	672, 838, 1430
Bsp143I	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
BspACI	CCGC	6 cut(s)	216, 281, 361, 398, 1073, 1466
BspANI	GGCC	5 cut(s)	5, 178, 576, 1076, 1208
BspCNI	CTCAG	3 cut(s)	102, 439, 820
BspFNI	CGCG	2 cut(s)	53, 128
BspPI	GGATC	2 cut(s)	152, 398
BspQI	GCTCTTC	1 cut(s)	534
BspT107I	GGYRCC	1 cut(s)	863
BsrDI	GCAATG	2 cut(s)	1269, 1354
BsrFI	RCCGGY	1 cut(s)	986
BsrI	ACTGG	1 cut(s)	481
BssAI	RCCGGY	1 cut(s)	986
BssECI	CCNNGG	3 cut(s)	386, 421, 970
BssMI	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
BssSI	CACGAG	1 cut(s)	225
BssT1I	CCWWGG	2 cut(s)	421, 970
Bst2BI	CACGAG	1 cut(s)	225
Bst2UI	CCWGG	1 cut(s)	495
Bst4CI	ACNGT	4 cut(s)	58, 698, 940, 1246
Bst6I	CTCTTC	1 cut(s)	534
BstAPI	GCANNNNNTGC	2 cut(s)	248, 1175
BstBAI	YACGTR	2 cut(s)	996, 1390
BstC8I	GCNNGC	4 cut(s)	86, 633, 775, 779
BstDEI	CTNAG	6 cut(s)	89, 169, 267, 447, 727, 807
BstF5I	GGATG	2 cut(s)	86, 1075
BstFNI	CGCG	2 cut(s)	53, 128
BstHHI	GCGC	1 cut(s)	53
BstKTI	GATC	7 cut(s)	43, 147, 273, 319, 393, 918, 1083
BstMBI	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
BstMCI	CGRYCG	1 cut(s)	700
BstNI	CCWGG	1 cut(s)	495
BstNSI	RCATGY	4 cut(s)	354, 610, 1231, 1347
BstSCI	CCNGG	2 cut(s)	493, 1122
BstSLI	GKGCMC	2 cut(s)	838, 1430
BstSNI	TACGTA	1 cut(s)	1390
BstUI	CGCG	2 cut(s)	53, 128
BstV1I	GCAGC	4 cut(s)	230, 238, 282, 1393
BstX2I	RGATCY	1 cut(s)	915
BstYI	RGATCY	1 cut(s)	915
BsuRI	GGCC	5 cut(s)	5, 178, 576, 1076, 1208
BtgZI	GCGATG	1 cut(s)	109
BtsCI	GGATG	2 cut(s)	86, 1075
BtsI	GCAGTG	1 cut(s)	372
BtsIMutI	CAGTG	3 cut(s)	372, 474, 585
Cac8I	GCNNGC	4 cut(s)	86, 633, 775, 779
CfoI	GCGC	1 cut(s)	53
Cfr10I	RCCGGY	1 cut(s)	986
Cfr13I	GGNCC	2 cut(s)	989, 1267
Csp6I	GTAC	3 cut(s)	500, 997, 1391
CspAI	ACCGGT	1 cut(s)	986
CspCI	CAANNNNNGTGG	2 cut(s)	463, 498
CviAII	CATG	7 cut(s)	351, 394, 607, 692, 1228, 1235, 1344
CviQI	GTAC	3 cut(s)	500, 997, 1391
DdeI	CTNAG	6 cut(s)	89, 169, 267, 447, 727, 807
DpnI	GATC	7 cut(s)	42, 146, 272, 318, 392, 917, 1082
DpnII	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
DrdI	GACNNNNNNGTC	1 cut(s)	1196
DseDI	GACNNNNNNGTC	1 cut(s)	1196
EaeI	YGGCCR	5 cut(s)	3, 176, 574, 1074, 1206
Eam1104I	CTCTTC	1 cut(s)	534
EarI	CTCTTC	1 cut(s)	534
EciI	GGCGGA	1 cut(s)	413
Ecl136II	GAGCTC	1 cut(s)	670
Eco105I	TACGTA	1 cut(s)	1390
Eco130I	CCWWGG	2 cut(s)	421, 970
Eco24I	GRGCYC	1 cut(s)	672
Eco47I	GGWCC	2 cut(s)	989, 1267
Eco53kI	GAGCTC	1 cut(s)	670
Eco88I	CYCGRG	1 cut(s)	310
EcoICRI	GAGCTC	1 cut(s)	670
EcoRII	CCWGG	1 cut(s)	493
EcoT14I	CCWWGG	2 cut(s)	421, 970
EcoT22I	ATGCAT	1 cut(s)	952
EcoT38I	GRGCYC	1 cut(s)	672
ErhI	CCWWGG	2 cut(s)	421, 970
FaeI	CATG	7 cut(s)	354, 397, 610, 695, 1231, 1238, 1347
FalI	AAGNNNNNCTT	2 cut(s)	1355, 1387
FaqI	GGGAC	3 cut(s)	457, 975, 1184
FatI	CATG	7 cut(s)	350, 393, 606, 691, 1227, 1234, 1343
FauI	CCCGC	1 cut(s)	1459
FauNDI	CATATG	2 cut(s)	1150, 1303
Fnu4HI	GCNGC	6 cut(s)	219, 252, 282, 296, 1074, 1407
FokI	GGATG	2 cut(s)	93, 1082
FriOI	GRGCYC	1 cut(s)	672
Fsp4HI	GCNGC	6 cut(s)	219, 252, 282, 296, 1074, 1407
FspBI	CTAG	6 cut(s)	186, 647, 704, 971, 1368, 1431
GlaI	GCGC	1 cut(s)	52
GluI	GCNGC	6 cut(s)	219, 252, 282, 296, 1074, 1407
GsaI	CCCAGC	1 cut(s)	559
GsuI	CTGGAG	2 cut(s)	516, 1317
HaeIII	GGCC	5 cut(s)	5, 178, 576, 1076, 1208
HapII	CCGG	2 cut(s)	987, 1124
HhaI	GCGC	1 cut(s)	53
Hin1II	CATG	7 cut(s)	354, 397, 610, 695, 1231, 1238, 1347
Hin6I	GCGC	1 cut(s)	51
HinP1I	GCGC	1 cut(s)	51
HindIII	AAGCTT	1 cut(s)	1088
HinfI	GANTC	5 cut(s)	189, 212, 228, 275, 1011
HpaII	CCGG	2 cut(s)	987, 1124
HphI	GGTGA	1 cut(s)	1020
Hpy166II	GTNNAC	1 cut(s)	1428
Hpy188I	TCNGA	8 cut(s)	45, 92, 211, 387, 545, 810, 915, 1046
Hpy188III	TCNNGA	9 cut(s)	186, 412, 925, 944, 1084, 1282, 1318, 1334, 1359
Hpy8I	GTNNAC	1 cut(s)	1428
Hpy99I	CGWCG	1 cut(s)	58
HpyAV	CCTTC	4 cut(s)	654, 812, 1094, 1438
HpyCH4III	ACNGT	4 cut(s)	58, 698, 940, 1246
HpyCH4IV	ACGT	2 cut(s)	995, 1389
HpyCH4V	TGCA	9 cut(s)	30, 242, 350, 377, 612, 950, 1347, 1409, 1428
HpyF3I	CTNAG	6 cut(s)	89, 169, 267, 447, 727, 807
HpySE526I	ACGT	2 cut(s)	995, 1389
Hsp92II	CATG	7 cut(s)	354, 397, 610, 695, 1231, 1238, 1347
HspAI	GCGC	1 cut(s)	51
Kzo9I	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
LguI	GCTCTTC	1 cut(s)	534
LmnI	GCTCC	7 cut(s)	159, 400, 545, 667, 675, 804, 1336
Lsp1109I	GCAGC	4 cut(s)	230, 238, 282, 1393
LweI	GCATC	4 cut(s)	71, 514, 937, 1060
MaeI	CTAG	6 cut(s)	186, 647, 704, 971, 1368, 1431
MaeII	ACGT	2 cut(s)	995, 1389
MaeIII	GTNAC	5 cut(s)	370, 416, 1055, 1187, 1309
MalI	GATC	7 cut(s)	42, 146, 272, 318, 392, 917, 1082
MboI	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
MboII	GAAGA	2 cut(s)	521, 1270
MflI	RGATCY	1 cut(s)	915
MhlI	GDGCHC	3 cut(s)	672, 838, 1430
MlsI	TGGCCA	4 cut(s)	5, 178, 576, 1208
MluCI	AATT	4 cut(s)	570, 783, 1181, 1384
MluNI	TGGCCA	4 cut(s)	5, 178, 576, 1208
MlyI	GAGTC	4 cut(s)	183, 237, 284, 1005
MmeI	TCCRAC	1 cut(s)	58
Mox20I	TGGCCA	4 cut(s)	5, 178, 576, 1208
Mph1103I	ATGCAT	1 cut(s)	952
MscI	TGGCCA	4 cut(s)	5, 178, 576, 1208
MseI	TTAA	3 cut(s)	1157, 1184, 1498
Msp20I	TGGCCA	4 cut(s)	5, 178, 576, 1208
MspA1I	CMGCKG	1 cut(s)	281
MspI	CCGG	2 cut(s)	987, 1124
MspR9I	CCNGG	2 cut(s)	495, 1124
MvaI	CCWGG	1 cut(s)	495
MvnI	CGCG	2 cut(s)	53, 128
NciI	CCSGG	1 cut(s)	1124
NdeI	CATATG	2 cut(s)	1150, 1303
NdeII	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
NlaIII	CATG	7 cut(s)	354, 397, 610, 695, 1231, 1238, 1347
NmuCI	GTSAC	3 cut(s)	370, 1187, 1309
NsiI	ATGCAT	1 cut(s)	952
NspI	RCATGY	4 cut(s)	354, 610, 1231, 1347
PaeR7I	CTCGAG	1 cut(s)	310
PciSI	GCTCTTC	1 cut(s)	534
PcsI	WCGNNNNNNNCGW	1 cut(s)	1289
PfeI	GAWTC	1 cut(s)	212
PflMI	CCANNNNNTGG	1 cut(s)	566
PinAI	ACCGGT	1 cut(s)	986
PkrI	GCNGC	6 cut(s)	220, 253, 283, 297, 1075, 1408
PleI	GAGTC	4 cut(s)	183, 236, 283, 1005
PpsI	GAGTC	4 cut(s)	183, 236, 283, 1005
Ppu21I	YACGTR	2 cut(s)	996, 1390
PsiI	TTATAA	1 cut(s)	462
Psp124BI	GAGCTC	1 cut(s)	672
Psp6I	CCWGG	1 cut(s)	493
PspFI	CCCAGC	1 cut(s)	555
PspGI	CCWGG	1 cut(s)	493
PspPI	GGNCC	2 cut(s)	989, 1267
PspXI	VCTCGAGB	1 cut(s)	310
PsuI	RGATCY	1 cut(s)	915
RsaI	GTAC	3 cut(s)	501, 998, 1392
RsaNI	GTAC	3 cut(s)	500, 997, 1391
SacI	GAGCTC	1 cut(s)	672
SapI	GCTCTTC	1 cut(s)	534
SaqAI	TTAA	3 cut(s)	1157, 1184, 1498
SatI	GCNGC	6 cut(s)	219, 252, 282, 296, 1074, 1407
Sau3AI	GATC	7 cut(s)	40, 144, 270, 316, 390, 915, 1080
Sau96I	GGNCC	2 cut(s)	989, 1267
ScaI	AGTACT	1 cut(s)	501
SchI	GAGTC	4 cut(s)	183, 237, 284, 1005
ScrFI	CCNGG	2 cut(s)	495, 1124
SduI	GDGCHC	3 cut(s)	672, 838, 1430
SfaNI	GCATC	4 cut(s)	71, 514, 937, 1060
Sfr274I	CTCGAG	1 cut(s)	310
SinI	GGWCC	2 cut(s)	989, 1267
SlaI	CTCGAG	1 cut(s)	310
SmlI	CTYRAG	2 cut(s)	310, 410
SmoI	CTYRAG	2 cut(s)	310, 410
SnaBI	TACGTA	1 cut(s)	1390
Sse9I	AATT	4 cut(s)	570, 783, 1181, 1384
SsiI	CCGC	6 cut(s)	216, 281, 361, 398, 1073, 1466
SspMI	CTAG	6 cut(s)	186, 647, 704, 971, 1368, 1431
SstI	GAGCTC	1 cut(s)	672
StyD4I	CCNGG	2 cut(s)	493, 1122
StyI	CCWWGG	2 cut(s)	421, 970
TaaI	ACNGT	4 cut(s)	58, 698, 940, 1246
TaiI	ACGT	2 cut(s)	998, 1392
TaqI	TCGA	6 cut(s)	273, 311, 926, 1009, 1249, 1283
TasI	AATT	4 cut(s)	570, 783, 1181, 1384
TatI	WGTACW	1 cut(s)	499
TauI	GCSGC	2 cut(s)	284, 1076
TfiI	GAWTC	1 cut(s)	212
Tru1I	TTAA	3 cut(s)	1157, 1184, 1498
Tru9I	TTAA	3 cut(s)	1157, 1184, 1498
TscAI	CASTG	3 cut(s)	379, 481, 592
TseFI	GTSAC	3 cut(s)	370, 1187, 1309
TseI	GCWGC	4 cut(s)	218, 251, 295, 1406
Tsp45I	GTSAC	3 cut(s)	370, 1187, 1309
TspDTI	ATGAA	5 cut(s)	521, 946, 1223, 1301, 1320
TspRI	CASTG	3 cut(s)	379, 481, 592
Van91I	CCANNNNNTGG	1 cut(s)	566
VneI	GTGCAC	1 cut(s)	1426
VpaK11BI	GGWCC	2 cut(s)	989, 1267
XbaI	TCTAGA	1 cut(s)	185
XceI	RCATGY	4 cut(s)	354, 610, 1231, 1347
XcmI	CCANNNNNNNNNTGG	2 cut(s)	563, 1012
XhoI	CTCGAG	1 cut(s)	310
XmaJI	CCTAGG	1 cut(s)	970
XspI	CTAG	6 cut(s)	186, 647, 704, 971, 1368, 1431
ZrmI	AGTACT	1 cut(s)	501
Zsp2I	ATGCAT	1 cut(s)	952

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.